Prupe.1G228100_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
24132613 .. 24133898
1286 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G228100.1

Sequence Viewer

Length: 1170 bp
ATGGCTATGGCTTGCACCACCGAAAGAAGGAGTTCAAGCACAACACCAACACCAAATAAGTGGACTGATGAACTCCCAGCTGATCTTTTAGAGTTGATCGTGAAAAAGCTCGCTTGGAATTTCGTCGACATCATTCGCTTTAAAGCCGTCTGTTCTTCTTGGAACCGCGCTGCAAGATCGTATACCTCTGCCCCGTATCACACCCAGTTGCCTCCTCAATATCCATGGCTCAAGCTCTTCACCCAACGGGATAAGCAACAATATCCATGGCCCTCTCATGACCATCACAGCTGGTGCTTCTTCAGCCTTGCAGACAATAACGTTTACAAGATGGACTGGGATACGTCCCAAGGCTTTGGCTTTCATGACCGGGCTGTTTCCTTTTTGGGTTCATCACATGGGTGGCTGGTGGTTCGGGAGAATAAGCCACCGCGCGGGTCTTCAATACATAAAGTTGTGCTTTCCTCGGATCCCTCTCGCAACAACAACTTTGTCGTTGTGCACGGCAGAGGAGGAGACAACGCTGCAGCATGGACTGATTTGGGGGGTTATCCTTGGTATGGCAATTCTGATATCGTATTCCACAACAATGGCCATTTATTTGCACTGTGGATAGACCACTCAATTAAAGTTTGGGACTTCGGGGACACCTGTAATGATAATATTCCCACGAAGATCATGAATTTTCAACCTTCCATGGATCTGAATGTTATTGGTGGTGGCAGCATGACGAAGGATGAACGATGGTTTGTGGACTCGATGGGTCATCTTTTGCTTGTGGGGCGGGAAAGTTCCGAGAATGATTCCAGATCAGGAGCAGTGGAATTTTATATCTACAAGTTAAACATTGCTGCCAAAACGTGGGAGAAGGTGGAATGTTTGCCTGATTGTGCTTTATTTTTGGGCAGAAATCAACCGGCAATGTCATTATCCACCCAAGAACTGCCAAGATTAAAAGAAAACTCGATTTATGAGTGGAAGCTGCAGAAGGATTGTGATTATAATTTTGATATTCATGTAGAAGTATACAACCTAGAAACTAAACTTGTTAAACCATATTATACAACTCGAGTGCCTAAGAGCGCTAGTTGTTCACCACCCGTTTGGATTGTGCCTAGTGCTTTCGGCCCAATAAGAGAAAAGATTGTGCTTAGTACTTGGTTACGTTAG

Protein Analysis

390

Amino Acids

44.6

Weight (kDa)

7.2

Isoelectric Point (pI)

41.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1002
AccB7I CCANNNNNTGG 1 cut(s) 861
AccI GTMKAC 3 cut(s) 126, 182, 1026
AccII CGCG 3 cut(s) 168, 433, 435
AciI CCGC 4 cut(s) 166, 431, 435, 784
AclI AACGTT 1 cut(s) 321
AclWI GGATC 3 cut(s) 464, 477, 708
AcoI YGGCCR 1 cut(s) 592
AcsI RAATTY 3 cut(s) 118, 682, 824
AcuI CTGAAG 1 cut(s) 286
AfaI GTAC 1 cut(s) 1156
AfeI AGCGCT 1 cut(s) 1084
AfiI CCNNNNNNNGG 4 cut(s) 27, 434, 560, 861
AgsI TTSAA 3 cut(s) 36, 444, 689
AleI CACNNNNGTG 1 cut(s) 400
AluBI AGCT 5 cut(s) 80, 109, 235, 291, 982
AluI AGCT 5 cut(s) 80, 109, 235, 291, 982
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 1 cut(s) 510
Alw44I GTGCAC 1 cut(s) 500
AlwI GGATC 3 cut(s) 464, 477, 708
Ama87I CYCGRG 1 cut(s) 1068
Aor51HI AGCGCT 1 cut(s) 1084
AoxI GGCC 3 cut(s) 269, 592, 1126
ApaLI GTGCAC 1 cut(s) 500
ApeKI GCWGC 6 cut(s) 170, 524, 527, 723, 851, 982
ApoI RAATTY 3 cut(s) 118, 682, 824
Asp700I GAANNNNTTC 1 cut(s) 31
AspLEI GCGC 3 cut(s) 170, 435, 1085
AspS9I GGNCC 2 cut(s) 270, 1127
AsuC2I CCSGG 1 cut(s) 371
AsuHPI GGTGA 2 cut(s) 232, 1086
AvaI CYCGRG 1 cut(s) 1068
BaeGI GKGCMC 1 cut(s) 504
BalI TGGCCA 1 cut(s) 594
BamHI GGATCC 1 cut(s) 469
BbsI GAAGAC 1 cut(s) 432
Bbv12I GWGCWC 1 cut(s) 504
BbvI GCAGC 6 cut(s) 157, 511, 539, 735, 838, 969
BccI CCATC 4 cut(s) 291, 325, 738, 754
BceAI ACGGC 2 cut(s) 131, 520
BciVI GTATCC 1 cut(s) 334
BcnI CCSGG 1 cut(s) 371
BcoDI GTCTC 1 cut(s) 510
BfaI CTAG 3 cut(s) 1034, 1086, 1116
BfmI CTRYAG 2 cut(s) 525, 983
BfoI RGCGCY 1 cut(s) 1086
BfuI GTATCC 1 cut(s) 334
BisI GCNGC 6 cut(s) 171, 525, 528, 724, 852, 983
BlsI GCNGC 6 cut(s) 172, 526, 529, 725, 853, 984
BmcAI AGTACT 1 cut(s) 1156
Bme1390I CCNGG 1 cut(s) 371
BmeT110I CYCGRG 1 cut(s) 1068
BmgT120I GGNCC 2 cut(s) 270, 1127
BmiI GGNNCC 2 cut(s) 164, 471
BmrFI CCNGG 1 cut(s) 371
BmrI ACTGGG 2 cut(s) 199, 346
BmuI ACTGGG 2 cut(s) 199, 346
BpiI GAAGAC 1 cut(s) 432
BpuEI CTTGAG 1 cut(s) 215
BpuMI CCSGG 1 cut(s) 371
BsaJI CCNNGG 6 cut(s) 224, 266, 349, 465, 554, 696
Bsc4I CCNNNNNNNGG 4 cut(s) 27, 434, 560, 861
Bse118I RCCGGY 1 cut(s) 916
Bse1I ACTGG 2 cut(s) 205, 341
Bse3DI GCAATG 2 cut(s) 846, 927
BseDI CCNNGG 6 cut(s) 224, 266, 349, 465, 554, 696
BseGI GGATG 1 cut(s) 742
BseLI CCNNNNNNNGG 4 cut(s) 27, 434, 560, 861
BseMI GCAATG 2 cut(s) 846, 927
BseNI ACTGG 2 cut(s) 205, 341
BseRI GAGGAG 3 cut(s) 204, 525, 528
BseSI GKGCMC 1 cut(s) 504
BseXI GCAGC 6 cut(s) 157, 511, 539, 735, 838, 969
BseYI CCCAGC 1 cut(s) 76
Bsh1236I CGCG 3 cut(s) 168, 433, 435
BshFI GGCC 3 cut(s) 271, 594, 1128
BsiHKAI GWGCWC 1 cut(s) 504
BsiHKCI CYCGRG 1 cut(s) 1068
BsiSI CCGG 2 cut(s) 370, 917
BslFI GGGAC 3 cut(s) 331, 650, 659
BslI CCNNNNNNNGG 4 cut(s) 27, 434, 560, 861
BsmAI GTCTC 1 cut(s) 510
BsmFI GGGAC 3 cut(s) 331, 650, 659
BsnI GGCC 3 cut(s) 271, 594, 1128
BsoBI CYCGRG 1 cut(s) 1068
Bsp1286I GDGCHC 1 cut(s) 504
Bsp143I GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
Bsp19I CCATGG 3 cut(s) 224, 266, 696
BspACI CCGC 4 cut(s) 166, 431, 435, 784
BspANI GGCC 3 cut(s) 271, 594, 1128
BspFNI CGCG 3 cut(s) 168, 433, 435
BspHI TCATGA 3 cut(s) 277, 364, 678
BspLI GGNNCC 2 cut(s) 164, 471
BspMAI CTGCAG 2 cut(s) 529, 987
BspPI GGATC 3 cut(s) 464, 477, 708
BspQI GCTCTTC 1 cut(s) 242
BsrDI GCAATG 2 cut(s) 846, 927
BsrFI RCCGGY 1 cut(s) 916
BsrI ACTGG 2 cut(s) 205, 341
BssAI RCCGGY 1 cut(s) 916
BssECI CCNNGG 6 cut(s) 224, 266, 349, 465, 554, 696
BssMI GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
BssNAI GTATAC 2 cut(s) 183, 1027
BssT1I CCWWGG 5 cut(s) 224, 266, 349, 554, 696
Bst1107I GTATAC 2 cut(s) 183, 1027
Bst4CI ACNGT 1 cut(s) 609
Bst6I CTCTTC 1 cut(s) 242
BstC8I GCNNGC 2 cut(s) 13, 111
BstDEI CTNAG 2 cut(s) 1077, 1151
BstDSI CCRYGG 3 cut(s) 224, 266, 696
BstF5I GGATG 1 cut(s) 742
BstFNI CGCG 3 cut(s) 168, 433, 435
BstH2I RGCGCY 1 cut(s) 1086
BstHHI GCGC 3 cut(s) 170, 435, 1085
BstKTI GATC 7 cut(s) 85, 99, 179, 472, 678, 703, 812
BstMAI GTCTC 1 cut(s) 510
BstMBI GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
BstMWI GCNNNNNNNGC 2 cut(s) 303, 781
BstSCI CCNGG 1 cut(s) 369
BstSFI CTRYAG 2 cut(s) 525, 983
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 3 cut(s) 168, 433, 435
BstV1I GCAGC 6 cut(s) 157, 511, 539, 735, 838, 969
BstV2I GAAGAC 1 cut(s) 432
BstX2I RGATCY 2 cut(s) 469, 700
BstXI CCANNNNNNTGG 4 cut(s) 60, 356, 590, 1104
BstYI RGATCY 2 cut(s) 469, 700
BstZ17I GTATAC 2 cut(s) 183, 1027
BsuI GTATCC 1 cut(s) 334
BsuRI GGCC 3 cut(s) 271, 594, 1128
BtgI CCRYGG 3 cut(s) 224, 266, 696
BtsCI GGATG 1 cut(s) 742
BtsI GCAGTG 1 cut(s) 825
BtsIMutI CAGTG 2 cut(s) 605, 825
Cac8I GCNNGC 2 cut(s) 13, 111
CciI TCATGA 3 cut(s) 277, 364, 678
CfoI GCGC 3 cut(s) 170, 435, 1085
Cfr10I RCCGGY 1 cut(s) 916
Cfr13I GGNCC 2 cut(s) 270, 1127
Csp6I GTAC 1 cut(s) 1155
CviQI GTAC 1 cut(s) 1155
DdeI CTNAG 2 cut(s) 1077, 1151
DpnI GATC 7 cut(s) 84, 98, 178, 471, 677, 702, 811
DpnII GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
DraI TTTAAA 1 cut(s) 142
EaeI YGGCCR 1 cut(s) 592
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
Eco130I CCWWGG 5 cut(s) 224, 266, 349, 554, 696
Eco32I GATATC 1 cut(s) 574
Eco47III AGCGCT 1 cut(s) 1084
Eco57I CTGAAG 1 cut(s) 286
Eco88I CYCGRG 1 cut(s) 1068
EcoRV GATATC 1 cut(s) 574
EcoT14I CCWWGG 5 cut(s) 224, 266, 349, 554, 696
ErhI CCWWGG 5 cut(s) 224, 266, 349, 554, 696
FalI AAGNNNNNCTT 2 cut(s) 444, 476
FaqI GGGAC 3 cut(s) 331, 650, 659
FauI CCCGC 2 cut(s) 428, 777
FblI GTMKAC 3 cut(s) 126, 182, 1026
Fnu4HI GCNGC 6 cut(s) 171, 525, 528, 724, 852, 983
FokI GGATG 1 cut(s) 749
Fsp4HI GCNGC 6 cut(s) 171, 525, 528, 724, 852, 983
FspBI CTAG 3 cut(s) 1034, 1086, 1116
GlaI GCGC 3 cut(s) 169, 434, 1084
GluI GCNGC 6 cut(s) 171, 525, 528, 724, 852, 983
GsaI CCCAGC 1 cut(s) 80
HaeII RGCGCY 1 cut(s) 1086
HaeIII GGCC 3 cut(s) 271, 594, 1128
HapII CCGG 2 cut(s) 370, 917
HhaI GCGC 3 cut(s) 170, 435, 1085
Hin6I GCGC 3 cut(s) 168, 433, 1083
HinP1I GCGC 3 cut(s) 168, 433, 1083
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HinfI GANTC 2 cut(s) 755, 803
HpaII CCGG 2 cut(s) 370, 917
HphI GGTGA 2 cut(s) 232, 1086
Hpy166II GTNNAC 8 cut(s) 63, 127, 183, 325, 502, 754, 1027, 1094
Hpy188I TCNGA 4 cut(s) 469, 571, 705, 796
Hpy188III TCNNGA 7 cut(s) 100, 278, 365, 416, 679, 807, 813
Hpy8I GTNNAC 8 cut(s) 63, 127, 183, 325, 502, 754, 1027, 1094
Hpy99I CGWCG 1 cut(s) 128
HpyAV CCTTC 5 cut(s) 21, 702, 727, 862, 982
HpyCH4III ACNGT 1 cut(s) 609
HpyCH4IV ACGT 4 cut(s) 321, 344, 860, 1165
HpyCH4V TGCA 7 cut(s) 15, 173, 311, 502, 527, 605, 985
HpyF10VI GCNNNNNNNGC 2 cut(s) 303, 781
HpyF3I CTNAG 2 cut(s) 1077, 1151
HpySE526I ACGT 4 cut(s) 321, 344, 860, 1165
HspAI GCGC 3 cut(s) 168, 433, 1083
Kzo9I GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
LguI GCTCTTC 1 cut(s) 242
LmnI GCTCC 1 cut(s) 815
Lsp1109I GCAGC 6 cut(s) 157, 511, 539, 735, 838, 969
MaeI CTAG 3 cut(s) 1034, 1086, 1116
MaeII ACGT 4 cut(s) 321, 344, 860, 1165
MaeIII GTNAC 1 cut(s) 1161
MalI GATC 7 cut(s) 84, 98, 178, 471, 677, 702, 811
MboI GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
MboII GAAGA 5 cut(s) 147, 229, 292, 432, 685
MflI RGATCY 2 cut(s) 469, 700
MhlI GDGCHC 1 cut(s) 504
MlsI TGGCCA 1 cut(s) 594
MluCI AATT 6 cut(s) 118, 565, 624, 682, 824, 1003
MluNI TGGCCA 1 cut(s) 594
MlyI GAGTC 1 cut(s) 749
MnlI CCTC 8 cut(s) 196, 222, 225, 283, 475, 484, 503, 506
Mox20I TGGCCA 1 cut(s) 594
MroXI GAANNNNTTC 1 cut(s) 31
MscI TGGCCA 1 cut(s) 594
MseI TTAA 5 cut(s) 141, 627, 842, 953, 1050
MslI CAYNNNNRTG 2 cut(s) 400, 588
Msp20I TGGCCA 1 cut(s) 594
MspA1I CMGCKG 2 cut(s) 80, 291
MspI CCGG 2 cut(s) 370, 917
MspR9I CCNGG 1 cut(s) 371
MvnI CGCG 3 cut(s) 168, 433, 435
MwoI GCNNNNNNNGC 2 cut(s) 303, 781
NciI CCSGG 1 cut(s) 371
NcoI CCATGG 3 cut(s) 224, 266, 696
NdeII GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
NlaIV GGNNCC 2 cut(s) 164, 471
OliI CACNNNNGTG 1 cut(s) 400
PaeR7I CTCGAG 1 cut(s) 1068
PagI TCATGA 3 cut(s) 277, 364, 678
PciSI GCTCTTC 1 cut(s) 242
PdmI GAANNNNTTC 1 cut(s) 31
PfeI GAWTC 1 cut(s) 803
PflMI CCANNNNNTGG 1 cut(s) 861
PkrI GCNGC 6 cut(s) 172, 526, 529, 725, 853, 984
PleI GAGTC 1 cut(s) 749
PpsI GAGTC 1 cut(s) 749
PsiI TTATAA 1 cut(s) 1002
Psp1406I AACGTT 1 cut(s) 321
PspFI CCCAGC 1 cut(s) 76
PspN4I GGNNCC 2 cut(s) 164, 471
PspPI GGNCC 2 cut(s) 270, 1127
PspXI VCTCGAGB 1 cut(s) 1068
PstI CTGCAG 2 cut(s) 529, 987
PsuI RGATCY 2 cut(s) 469, 700
PvuII CAGCTG 2 cut(s) 80, 291
RsaI GTAC 1 cut(s) 1156
RsaNI GTAC 1 cut(s) 1155
RseI CAYNNNNRTG 2 cut(s) 400, 588
SalI GTCGAC 1 cut(s) 125
SapI GCTCTTC 1 cut(s) 242
SaqAI TTAA 5 cut(s) 141, 627, 842, 953, 1050
SatI GCNGC 6 cut(s) 171, 525, 528, 724, 852, 983
Sau3AI GATC 7 cut(s) 82, 96, 176, 469, 675, 700, 809
Sau96I GGNCC 2 cut(s) 270, 1127
ScaI AGTACT 1 cut(s) 1156
SchI GAGTC 1 cut(s) 749
ScrFI CCNGG 1 cut(s) 371
SduI GDGCHC 1 cut(s) 504
SfcI CTRYAG 2 cut(s) 525, 983
Sfr274I CTCGAG 1 cut(s) 1068
SlaI CTCGAG 1 cut(s) 1068
SmiMI CAYNNNNRTG 2 cut(s) 400, 588
SmlI CTYRAG 2 cut(s) 230, 1068
SmoI CTYRAG 2 cut(s) 230, 1068
Sse9I AATT 6 cut(s) 118, 565, 624, 682, 824, 1003
SsiI CCGC 4 cut(s) 166, 431, 435, 784
SspI AATATT 1 cut(s) 664
SspMI CTAG 3 cut(s) 1034, 1086, 1116
StyD4I CCNGG 1 cut(s) 369
StyI CCWWGG 5 cut(s) 224, 266, 349, 554, 696
TaaI ACNGT 1 cut(s) 609
TaiI ACGT 4 cut(s) 324, 347, 863, 1168
TaqI TCGA 4 cut(s) 126, 758, 965, 1069
TasI AATT 6 cut(s) 118, 565, 624, 682, 824, 1003
TatI WGTACW 1 cut(s) 1154
TfiI GAWTC 1 cut(s) 803
Tru1I TTAA 5 cut(s) 141, 627, 842, 953, 1050
Tru9I TTAA 5 cut(s) 141, 627, 842, 953, 1050
TscAI CASTG 2 cut(s) 612, 825
TseI GCWGC 6 cut(s) 170, 524, 527, 723, 851, 982
TspDTI ATGAA 6 cut(s) 84, 353, 381, 695, 753, 1004
TspRI CASTG 2 cut(s) 612, 825
Van91I CCANNNNNTGG 1 cut(s) 861
VneI GTGCAC 1 cut(s) 500
XapI RAATTY 3 cut(s) 118, 682, 824
XhoI CTCGAG 1 cut(s) 1068
XmiI GTMKAC 3 cut(s) 126, 182, 1026
XmnI GAANNNNTTC 1 cut(s) 31
XspI CTAG 3 cut(s) 1034, 1086, 1116
ZrmI AGTACT 1 cut(s) 1156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.