f-box protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 403 |
| Acc16I | TGCGCA | 1 cut(s) | 1004 |
| AccB1I | GGYRCC | 1 cut(s) | 321 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 978 |
| AccI | GTMKAC | 1 cut(s) | 18 |
| AccII | CGCG | 3 cut(s) | 293, 397, 619 |
| AciI | CCGC | 1 cut(s) | 416 |
| AclWI | GGATC | 2 cut(s) | 903, 1214 |
| AcoI | YGGCCR | 1 cut(s) | 217 |
| AcsI | RAATTY | 1 cut(s) | 405 |
| AcyI | GRCGYC | 1 cut(s) | 400 |
| AfaI | GTAC | 1 cut(s) | 1191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 978 |
| AflIII | ACRYGT | 1 cut(s) | 291 |
| AgeI | ACCGGT | 1 cut(s) | 443 |
| AgsI | TTSAA | 8 cut(s) | 125, 130, 263, 299, 689, 703, 786, 961 |
| AhlI | ACTAGT | 1 cut(s) | 1186 |
| AjnI | CCWGG | 1 cut(s) | 324 |
| AleI | CACNNNNGTG | 1 cut(s) | 340 |
| AluBI | AGCT | 5 cut(s) | 67, 88, 242, 412, 1013 |
| AluI | AGCT | 5 cut(s) | 67, 88, 242, 412, 1013 |
| Alw21I | GWGCWC | 1 cut(s) | 69 |
| Alw26I | GTCTC | 1 cut(s) | 174 |
| AlwI | GGATC | 2 cut(s) | 903, 1214 |
| Ama87I | CYCGRG | 1 cut(s) | 1053 |
| AoxI | GGCC | 2 cut(s) | 217, 425 |
| ApeKI | GCWGC | 2 cut(s) | 158, 239 |
| ApoI | RAATTY | 1 cut(s) | 405 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 512, 544 |
| AsiGI | ACCGGT | 1 cut(s) | 443 |
| AspA2I | CCTAGG | 1 cut(s) | 1162 |
| AspLEI | GCGC | 2 cut(s) | 619, 1005 |
| AspS9I | GGNCC | 1 cut(s) | 426 |
| AsuHPI | GGTGA | 4 cut(s) | 42, 458, 553, 899 |
| AvaI | CYCGRG | 1 cut(s) | 1053 |
| AvrII | CCTAGG | 1 cut(s) | 1162 |
| AxyI | CCTNAGG | 1 cut(s) | 903 |
| BanI | GGYRCC | 1 cut(s) | 321 |
| BanII | GRGCYC | 2 cut(s) | 69, 319 |
| BbsI | GAAGAC | 1 cut(s) | 1187 |
| Bbv12I | GWGCWC | 1 cut(s) | 69 |
| BbvI | GCAGC | 2 cut(s) | 145, 251 |
| BccI | CCATC | 5 cut(s) | 290, 594, 671, 725, 734 |
| BceAI | ACGGC | 2 cut(s) | 119, 232 |
| BciT130I | CCWGG | 1 cut(s) | 326 |
| BciVI | GTATCC | 1 cut(s) | 1057 |
| BclI | TGATCA | 3 cut(s) | 90, 307, 1195 |
| BcoDI | GTCTC | 1 cut(s) | 174 |
| BcuI | ACTAGT | 1 cut(s) | 1186 |
| BfaI | CTAG | 3 cut(s) | 195, 1163, 1187 |
| BfmI | CTRYAG | 2 cut(s) | 253, 928 |
| BfuI | GTATCC | 1 cut(s) | 1057 |
| BisI | GCNGC | 2 cut(s) | 159, 240 |
| BlnI | CCTAGG | 1 cut(s) | 1162 |
| BlsI | GCNGC | 2 cut(s) | 160, 241 |
| BmcAI | AGTACT | 1 cut(s) | 1191 |
| Bme1390I | CCNGG | 1 cut(s) | 326 |
| BmeT110I | CYCGRG | 1 cut(s) | 1053 |
| BmgT120I | GGNCC | 1 cut(s) | 426 |
| BmiI | GGNNCC | 1 cut(s) | 323 |
| BmrFI | CCNGG | 1 cut(s) | 326 |
| BoxI | GACNNNNGTC | 1 cut(s) | 735 |
| BpiI | GAAGAC | 1 cut(s) | 1187 |
| BpmI | CTGGAG | 1 cut(s) | 53 |
| Bsa29I | ATCGAT | 1 cut(s) | 1037 |
| BsaHI | GRCGYC | 1 cut(s) | 400 |
| BsaJI | CCNNGG | 6 cut(s) | 179, 325, 456, 489, 1162, 1250 |
| BsaWI | WCCGGW | 1 cut(s) | 443 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 978 |
| Bse118I | RCCGGY | 1 cut(s) | 443 |
| Bse1I | ACTGG | 1 cut(s) | 62 |
| Bse21I | CCTNAGG | 1 cut(s) | 903 |
| Bse3DI | GCAATG | 1 cut(s) | 370 |
| BseBI | CCWGG | 1 cut(s) | 326 |
| BseCI | ATCGAT | 1 cut(s) | 1037 |
| BseDI | CCNNGG | 6 cut(s) | 179, 325, 456, 489, 1162, 1250 |
| BseGI | GGATG | 2 cut(s) | 477, 682 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 978 |
| BseMI | GCAATG | 1 cut(s) | 370 |
| BseMII | CTCAG | 4 cut(s) | 54, 818, 822, 917 |
| BseNI | ACTGG | 1 cut(s) | 62 |
| BseRI | GAGGAG | 2 cut(s) | 493, 1124 |
| BseXI | GCAGC | 2 cut(s) | 145, 251 |
| BseYI | CCCAGC | 1 cut(s) | 671 |
| BsgI | GTGCAG | 2 cut(s) | 258, 923 |
| Bsh1236I | CGCG | 3 cut(s) | 293, 397, 619 |
| BshFI | GGCC | 2 cut(s) | 219, 427 |
| BshNI | GGYRCC | 1 cut(s) | 321 |
| BshTI | ACCGGT | 1 cut(s) | 443 |
| BshVI | ATCGAT | 1 cut(s) | 1037 |
| BsiHKAI | GWGCWC | 1 cut(s) | 69 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1053 |
| BsiSI | CCGG | 1 cut(s) | 444 |
| BslFI | GGGAC | 2 cut(s) | 710, 909 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 978 |
| BsmAI | GTCTC | 1 cut(s) | 174 |
| BsmBI | CGTCTC | 1 cut(s) | 174 |
| BsmFI | GGGAC | 2 cut(s) | 710, 909 |
| BsmI | GAATGC | 1 cut(s) | 792 |
| BsnI | GGCC | 2 cut(s) | 219, 427 |
| BsoBI | CYCGRG | 1 cut(s) | 1053 |
| Bsp1286I | GDGCHC | 2 cut(s) | 69, 319 |
| Bsp143I | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| Bsp19I | CCATGG | 2 cut(s) | 179, 1250 |
| Bsp68I | TCGCGA | 1 cut(s) | 397 |
| BspACI | CCGC | 1 cut(s) | 416 |
| BspANI | GGCC | 2 cut(s) | 219, 427 |
| BspCNI | CTCAG | 4 cut(s) | 55, 817, 823, 916 |
| BspDI | ATCGAT | 1 cut(s) | 1037 |
| BspFNI | CGCG | 3 cut(s) | 293, 397, 619 |
| BspHI | TCATGA | 1 cut(s) | 1141 |
| BspLI | GGNNCC | 1 cut(s) | 323 |
| BspPI | GGATC | 2 cut(s) | 903, 1214 |
| BspT107I | GGYRCC | 1 cut(s) | 321 |
| BsrDI | GCAATG | 1 cut(s) | 370 |
| BsrFI | RCCGGY | 1 cut(s) | 443 |
| BsrI | ACTGG | 1 cut(s) | 62 |
| BssAI | RCCGGY | 1 cut(s) | 443 |
| BssECI | CCNNGG | 6 cut(s) | 179, 325, 456, 489, 1162, 1250 |
| BssMI | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| BssNAI | GTATAC | 1 cut(s) | 19 |
| BssNI | GRCGYC | 1 cut(s) | 400 |
| BssT1I | CCWWGG | 5 cut(s) | 179, 456, 489, 1162, 1250 |
| Bst1107I | GTATAC | 1 cut(s) | 19 |
| Bst2UI | CCWGG | 1 cut(s) | 326 |
| Bst4CI | ACNGT | 5 cut(s) | 26, 236, 257, 561, 607 |
| BstACI | GRCGYC | 1 cut(s) | 400 |
| BstDEI | CTNAG | 4 cut(s) | 63, 804, 831, 903 |
| BstDSI | CCRYGG | 2 cut(s) | 179, 1250 |
| BstF5I | GGATG | 2 cut(s) | 477, 682 |
| BstFNI | CGCG | 3 cut(s) | 293, 397, 619 |
| BstHHI | GCGC | 2 cut(s) | 619, 1005 |
| BstKTI | GATC | 8 cut(s) | 50, 93, 310, 451, 898, 1102, 1198, 1222 |
| BstMAI | GTCTC | 1 cut(s) | 174 |
| BstMBI | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 424 |
| BstNI | CCWGG | 1 cut(s) | 326 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 735 |
| BstSCI | CCNGG | 1 cut(s) | 324 |
| BstSFI | CTRYAG | 2 cut(s) | 253, 928 |
| BstUI | CGCG | 3 cut(s) | 293, 397, 619 |
| BstV1I | GCAGC | 2 cut(s) | 145, 251 |
| BstV2I | GAAGAC | 1 cut(s) | 1187 |
| BstX2I | RGATCY | 1 cut(s) | 895 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1233 |
| BstYI | RGATCY | 1 cut(s) | 895 |
| BstZ17I | GTATAC | 1 cut(s) | 19 |
| Bsu15I | ATCGAT | 1 cut(s) | 1037 |
| Bsu36I | CCTNAGG | 1 cut(s) | 903 |
| BsuI | GTATCC | 1 cut(s) | 1057 |
| BsuRI | GGCC | 2 cut(s) | 219, 427 |
| BsuTUI | ATCGAT | 1 cut(s) | 1037 |
| BtgI | CCRYGG | 2 cut(s) | 179, 1250 |
| BtsCI | GGATG | 2 cut(s) | 477, 682 |
| BtsI | GCAGTG | 1 cut(s) | 966 |
| BtsIMutI | CAGTG | 2 cut(s) | 241, 966 |
| BtuMI | TCGCGA | 1 cut(s) | 397 |
| CciI | TCATGA | 1 cut(s) | 1141 |
| CfoI | GCGC | 2 cut(s) | 619, 1005 |
| Cfr10I | RCCGGY | 1 cut(s) | 443 |
| Cfr13I | GGNCC | 1 cut(s) | 426 |
| ClaI | ATCGAT | 1 cut(s) | 1037 |
| Csp6I | GTAC | 1 cut(s) | 1190 |
| CspAI | ACCGGT | 1 cut(s) | 443 |
| CviAII | CATG | 8 cut(s) | 180, 187, 311, 338, 584, 875, 1142, 1251 |
| CviQI | GTAC | 1 cut(s) | 1190 |
| DdeI | CTNAG | 4 cut(s) | 63, 804, 831, 903 |
| DpnI | GATC | 8 cut(s) | 49, 92, 309, 450, 897, 1101, 1197, 1221 |
| DpnII | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| DraI | TTTAAA | 1 cut(s) | 384 |
| EaeI | YGGCCR | 1 cut(s) | 217 |
| Ecl136II | GAGCTC | 1 cut(s) | 67 |
| Eco130I | CCWWGG | 5 cut(s) | 179, 456, 489, 1162, 1250 |
| Eco24I | GRGCYC | 2 cut(s) | 69, 319 |
| Eco53kI | GAGCTC | 1 cut(s) | 67 |
| Eco81I | CCTNAGG | 1 cut(s) | 903 |
| Eco88I | CYCGRG | 1 cut(s) | 1053 |
| EcoICRI | GAGCTC | 1 cut(s) | 67 |
| EcoRII | CCWGG | 1 cut(s) | 324 |
| EcoT14I | CCWWGG | 5 cut(s) | 179, 456, 489, 1162, 1250 |
| EcoT38I | GRGCYC | 2 cut(s) | 69, 319 |
| ErhI | CCWWGG | 5 cut(s) | 179, 456, 489, 1162, 1250 |
| Esp3I | CGTCTC | 1 cut(s) | 174 |
| FaeI | CATG | 8 cut(s) | 183, 190, 314, 341, 587, 878, 1145, 1254 |
| FaqI | GGGAC | 2 cut(s) | 710, 909 |
| FatI | CATG | 8 cut(s) | 179, 186, 310, 337, 583, 874, 1141, 1250 |
| FauI | CCCGC | 1 cut(s) | 423 |
| FbaI | TGATCA | 3 cut(s) | 90, 307, 1195 |
| FblI | GTMKAC | 1 cut(s) | 18 |
| Fnu4HI | GCNGC | 2 cut(s) | 159, 240 |
| FokI | GGATG | 2 cut(s) | 484, 689 |
| FriOI | GRGCYC | 2 cut(s) | 69, 319 |
| Fsp4HI | GCNGC | 2 cut(s) | 159, 240 |
| FspBI | CTAG | 3 cut(s) | 195, 1163, 1187 |
| FspI | TGCGCA | 1 cut(s) | 1004 |
| GlaI | GCGC | 2 cut(s) | 618, 1004 |
| GluI | GCNGC | 2 cut(s) | 159, 240 |
| GsaI | CCCAGC | 1 cut(s) | 675 |
| GsuI | CTGGAG | 1 cut(s) | 53 |
| HaeIII | GGCC | 2 cut(s) | 219, 427 |
| HapII | CCGG | 1 cut(s) | 444 |
| HhaI | GCGC | 2 cut(s) | 619, 1005 |
| Hin1I | GRCGYC | 1 cut(s) | 400 |
| Hin1II | CATG | 8 cut(s) | 183, 190, 314, 341, 587, 878, 1145, 1254 |
| Hin6I | GCGC | 2 cut(s) | 617, 1003 |
| HinP1I | GCGC | 2 cut(s) | 617, 1003 |
| HincII | GTYRAC | 2 cut(s) | 115, 740 |
| HindII | GTYRAC | 2 cut(s) | 115, 740 |
| HindIII | AAGCTT | 1 cut(s) | 1011 |
| HinfI | GANTC | 4 cut(s) | 551, 821, 852, 992 |
| HpaII | CCGG | 1 cut(s) | 444 |
| HphI | GGTGA | 4 cut(s) | 42, 458, 553, 899 |
| Hpy166II | GTNNAC | 6 cut(s) | 19, 115, 277, 467, 740, 1156 |
| Hpy188I | TCNGA | 4 cut(s) | 64, 508, 807, 861 |
| Hpy188III | TCNNGA | 9 cut(s) | 94, 209, 260, 286, 396, 905, 1055, 1064, 1142 |
| Hpy8I | GTNNAC | 6 cut(s) | 19, 115, 277, 467, 740, 1156 |
| Hpy99I | CGWCG | 2 cut(s) | 30, 402 |
| HpyAV | CCTTC | 2 cut(s) | 131, 743 |
| HpyCH4III | ACNGT | 5 cut(s) | 26, 236, 257, 561, 607 |
| HpyCH4IV | ACGT | 4 cut(s) | 117, 400, 762, 948 |
| HpyCH4V | TGCA | 4 cut(s) | 239, 665, 749, 940 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 424 |
| HpyF3I | CTNAG | 4 cut(s) | 63, 804, 831, 903 |
| HpySE526I | ACGT | 4 cut(s) | 117, 400, 762, 948 |
| Hsp92I | GRCGYC | 1 cut(s) | 400 |
| Hsp92II | CATG | 8 cut(s) | 183, 190, 314, 341, 587, 878, 1145, 1254 |
| HspAI | GCGC | 2 cut(s) | 617, 1003 |
| Ksp22I | TGATCA | 3 cut(s) | 90, 307, 1195 |
| Kzo9I | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| LmnI | GCTCC | 3 cut(s) | 72, 195, 417 |
| Lsp1109I | GCAGC | 2 cut(s) | 145, 251 |
| MaeI | CTAG | 3 cut(s) | 195, 1163, 1187 |
| MaeII | ACGT | 4 cut(s) | 117, 400, 762, 948 |
| MalI | GATC | 8 cut(s) | 49, 92, 309, 450, 897, 1101, 1197, 1221 |
| MboI | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| MboII | GAAGA | 7 cut(s) | 57, 135, 275, 890, 1085, 1139, 1192 |
| MflI | RGATCY | 1 cut(s) | 895 |
| MhlI | GDGCHC | 2 cut(s) | 69, 319 |
| MluCI | AATT | 8 cut(s) | 125, 405, 753, 956, 1067, 1083, 1117, 1173 |
| MluI | ACGCGT | 1 cut(s) | 291 |
| MlyI | GAGTC | 1 cut(s) | 830 |
| MmeI | TCCRAC | 2 cut(s) | 531, 1129 |
| MnlI | CCTC | 8 cut(s) | 444, 509, 514, 583, 871, 883, 912, 1102 |
| MseI | TTAA | 3 cut(s) | 383, 611, 1203 |
| MslI | CAYNNNNRTG | 1 cut(s) | 340 |
| MspA1I | CMGCKG | 2 cut(s) | 88, 418 |
| MspI | CCGG | 1 cut(s) | 444 |
| MspR9I | CCNGG | 1 cut(s) | 326 |
| Mva1269I | GAATGC | 1 cut(s) | 792 |
| MvaI | CCWGG | 1 cut(s) | 326 |
| MvnI | CGCG | 3 cut(s) | 293, 397, 619 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 424 |
| NcoI | CCATGG | 2 cut(s) | 179, 1250 |
| NdeII | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| NlaIII | CATG | 8 cut(s) | 183, 190, 314, 341, 587, 878, 1145, 1254 |
| NlaIV | GGNNCC | 1 cut(s) | 323 |
| NruI | TCGCGA | 1 cut(s) | 397 |
| NsbI | TGCGCA | 1 cut(s) | 1004 |
| OliI | CACNNNNGTG | 1 cut(s) | 340 |
| PagI | TCATGA | 1 cut(s) | 1141 |
| PctI | GAATGC | 1 cut(s) | 792 |
| PfeI | GAWTC | 3 cut(s) | 551, 852, 992 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 978 |
| PinAI | ACCGGT | 1 cut(s) | 443 |
| PkrI | GCNGC | 2 cut(s) | 160, 241 |
| PleI | GAGTC | 1 cut(s) | 829 |
| PpsI | GAGTC | 1 cut(s) | 829 |
| PshAI | GACNNNNGTC | 1 cut(s) | 735 |
| Psp124BI | GAGCTC | 1 cut(s) | 69 |
| Psp6I | CCWGG | 1 cut(s) | 324 |
| PspFI | CCCAGC | 1 cut(s) | 671 |
| PspGI | CCWGG | 1 cut(s) | 324 |
| PspN4I | GGNNCC | 1 cut(s) | 323 |
| PspPI | GGNCC | 1 cut(s) | 426 |
| PsuI | RGATCY | 1 cut(s) | 895 |
| PvuII | CAGCTG | 1 cut(s) | 88 |
| RruI | TCGCGA | 1 cut(s) | 397 |
| RsaI | GTAC | 1 cut(s) | 1191 |
| RsaNI | GTAC | 1 cut(s) | 1190 |
| RseI | CAYNNNNRTG | 1 cut(s) | 340 |
| SacI | GAGCTC | 1 cut(s) | 69 |
| SaqAI | TTAA | 3 cut(s) | 383, 611, 1203 |
| SatI | GCNGC | 2 cut(s) | 159, 240 |
| Sau3AI | GATC | 8 cut(s) | 47, 90, 307, 448, 895, 1099, 1195, 1219 |
| Sau96I | GGNCC | 1 cut(s) | 426 |
| ScaI | AGTACT | 1 cut(s) | 1191 |
| SchI | GAGTC | 1 cut(s) | 830 |
| ScrFI | CCNGG | 1 cut(s) | 326 |
| SduI | GDGCHC | 2 cut(s) | 69, 319 |
| SfcI | CTRYAG | 2 cut(s) | 253, 928 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 340 |
| SpeI | ACTAGT | 1 cut(s) | 1186 |
| Sse9I | AATT | 8 cut(s) | 125, 405, 753, 956, 1067, 1083, 1117, 1173 |
| SsiI | CCGC | 1 cut(s) | 416 |
| SspI | AATATT | 1 cut(s) | 629 |
| SspMI | CTAG | 3 cut(s) | 195, 1163, 1187 |
| SstI | GAGCTC | 1 cut(s) | 69 |
| StyD4I | CCNGG | 1 cut(s) | 324 |
| StyI | CCWWGG | 5 cut(s) | 179, 456, 489, 1162, 1250 |
| TaaI | ACNGT | 5 cut(s) | 26, 236, 257, 561, 607 |
| TaiI | ACGT | 4 cut(s) | 120, 403, 765, 951 |
| TaqI | TCGA | 3 cut(s) | 208, 729, 1037 |
| TasI | AATT | 8 cut(s) | 125, 405, 753, 956, 1067, 1083, 1117, 1173 |
| TatI | WGTACW | 1 cut(s) | 1189 |
| TfiI | GAWTC | 3 cut(s) | 551, 852, 992 |
| Tru1I | TTAA | 3 cut(s) | 383, 611, 1203 |
| Tru9I | TTAA | 3 cut(s) | 383, 611, 1203 |
| TscAI | CASTG | 2 cut(s) | 241, 973 |
| TseI | GCWGC | 2 cut(s) | 158, 239 |
| TspDTI | ATGAA | 3 cut(s) | 321, 561, 785 |
| TspGWI | ACGGA | 1 cut(s) | 484 |
| TspRI | CASTG | 2 cut(s) | 241, 973 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 978 |
| XapI | RAATTY | 1 cut(s) | 405 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1230 |
| XmaJI | CCTAGG | 1 cut(s) | 1162 |
| XmiI | GTMKAC | 1 cut(s) | 18 |
| XspI | CTAG | 3 cut(s) | 195, 1163, 1187 |
| ZraI | GACGTC | 1 cut(s) | 401 |
| ZrmI | AGTACT | 1 cut(s) | 1191 |