Prupe.1G228000_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
24126537 .. 24127808
1272 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G228000.1

Sequence Viewer

Length: 1272 bp
ATGGCTTGTTCCACCGGAAGAAGGAGGCTAACTTATTCAAGCACAACACCAACAACAACAAAATGGGCTGATGAACTCCCACCTGAGCTGTTAGGGTTGATCGTGAAAAAGCTCTCTTCGAATGTTGTCGACATCATTCGCTTTGAAGCCGTCTGTTCTTCTTGGAACCGTGCTGCGAGATTGTATACCTCTGCCCCGTATTACACCAAGTTGCCTCAATATCCGTGGCTCATGCTCCTCATCCTCCCCATCCTCGACAAATGGAGTTGGTGCCCCAAACCCCCTCGTATTGATCATGAGAGCAGGTGCTTCTTTAGCCTTGCAGAGAATAAGGTTTACAAGATGGACTGGAAAGCGTCTCAAGACTTTCATGGCTATGGCGAGTGTTTGGGTTCATCACATGGGTGGCTGGCAATTCGGGAGTTTAAAACAATGAAATTATCCCAAGAAATCGTTCATCTTTTCAATCCAATTTCTAGACAACGCTTGACGCTTCCATTGAGGCCGGGAAAGGCTTCAACTGCTAAAGTTGTGCTTTCCTCGGACCCTTCTTGCAACAACAACTTTGTCGTTGTGGTAATTTATGATATCTCCTTGGGACCGCCAGGGATAGCATTCTATCAGCACGGCAGAGGAGGCAACGCTGCTGCATGGACTGACTTAGAGGGTTCACATGATCACTATTCTGATATTGTATTCCACAACAATGGCCAATTATTTGCACTGTCCACCAACCACTCAATTCAAGTTTGGGACTTCGGGGACACATATAATAATTATCCCACGAAGATCATGGATTTTCAACCTTCCATGAATCCAAATGTTCTTGACGGCCCAATGACGCACCATAAAAAATGGTTGGTGGAGTCAATGGGTGAGATTCTGTTTGTGGAGCGGCAATGGTTGTGGTTGGGGTCTGATACCAAAGGAGCAGTGGACTTTTATGTCTGCAAGTTAAACATTGCTGCCAAAAAGTGGGAGAAGGTGGAGTGCTTGCGTGGTTGTGCTTTATTTTTGGTCAGAAATCAATCAGCAATGTCATTATCCACCCGGGAATTGCCAAATTTGGAAGAAAACTCGATTTACTATGCAGAAACGTATCAGGAGGGTGATCTATATAAGCGGAAGCTGCATAGGGGTTGGAGTGAGATTCGTGTTGGAGGAGTATTCAAATTCAACTTAGAAACTAAAGTTGTTAAGCCATATTATATAACTCGTGAGCATGTGGACACTAGTTATTCAAAACCCGTTTGGATTGTGCCTAGTCCCTAG

Protein Analysis

424

Amino Acids

48.54

Weight (kDa)

8.78

Isoelectric Point (pI)

40.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 294
AasI GACNNNNNNGTC 1 cut(s) 944
Acc36I ACCTGC 1 cut(s) 294
AccB1I GGYRCC 1 cut(s) 270
AccB7I CCANNNNNTGG 1 cut(s) 975
AccBSI CCGCTC 1 cut(s) 895
AccI GTMKAC 2 cut(s) 129, 185
AciI CCGC 3 cut(s) 602, 895, 1123
AcoI YGGCCR 1 cut(s) 709
AcsI RAATTY 2 cut(s) 1063, 1172
AfiI CCNNNNNNNGG 2 cut(s) 21, 975
AgsI TTSAA 9 cut(s) 39, 146, 466, 519, 746, 803, 1171, 1177, 1242
AhlI ACTAGT 1 cut(s) 1232
AjnI CCWGG 1 cut(s) 604
AjuI GAANNNNNNNTTGG 2 cut(s) 438, 470
AleI CACNNNNGTG 1 cut(s) 403
AluBI AGCT 3 cut(s) 88, 112, 1129
AluI AGCT 3 cut(s) 88, 112, 1129
Alw26I GTCTC 1 cut(s) 363
Ama87I CYCGRG 1 cut(s) 1050
AoxI GGCC 3 cut(s) 503, 709, 832
ApeKI GCWGC 5 cut(s) 173, 644, 647, 965, 1129
ApoI RAATTY 2 cut(s) 1063, 1172
Asp700I GAANNNNTTC 2 cut(s) 453, 514
AspS9I GGNCC 3 cut(s) 544, 599, 833
AsuC2I CCSGG 3 cut(s) 507, 1051, 1052
AsuHPI GGTGA 2 cut(s) 887, 1121
AsuII TTCGAA 1 cut(s) 119
AvaI CYCGRG 1 cut(s) 1050
AvaII GGWCC 2 cut(s) 544, 599
BaeGI GKGCMC 1 cut(s) 275
BalI TGGCCA 1 cut(s) 711
BanI GGYRCC 1 cut(s) 270
BauI CACGAG 1 cut(s) 1215
BbvI GCAGC 5 cut(s) 160, 631, 634, 952, 1116
BccI CCATC 2 cut(s) 257, 337
BceAI ACGGC 3 cut(s) 134, 643, 847
BciT130I CCWGG 1 cut(s) 606
BclI TGATCA 2 cut(s) 292, 676
BcnI CCSGG 3 cut(s) 507, 1051, 1052
BcoDI GTCTC 1 cut(s) 363
BcuI ACTAGT 1 cut(s) 1232
BfaI CTAG 4 cut(s) 477, 1233, 1263, 1270
BfuAI ACCTGC 1 cut(s) 294
BisI GCNGC 6 cut(s) 174, 645, 648, 896, 966, 1130
BlsI GCNGC 6 cut(s) 175, 646, 649, 897, 967, 1131
Bme1390I CCNGG 4 cut(s) 507, 606, 1051, 1052
Bme18I GGWCC 2 cut(s) 544, 599
BmeT110I CYCGRG 1 cut(s) 1050
BmgT120I GGNCC 3 cut(s) 544, 599, 833
BmiI GGNNCC 4 cut(s) 167, 272, 546, 600
BmrFI CCNGG 4 cut(s) 507, 606, 1051, 1052
Bpu10I CCTNAGC 1 cut(s) 84
Bpu14I TTCGAA 1 cut(s) 119
BpuEI CTTGAG 1 cut(s) 345
BpuMI CCSGG 3 cut(s) 507, 1051, 1052
BsaJI CCNNGG 5 cut(s) 224, 540, 594, 605, 1050
BsaWI WCCGGW 1 cut(s) 14
Bsc4I CCNNNNNNNGG 2 cut(s) 21, 975
Bse1I ACTGG 1 cut(s) 353
Bse3DI GCAATG 3 cut(s) 905, 960, 1041
BseBI CCWGG 1 cut(s) 606
BseDI CCNNGG 5 cut(s) 224, 540, 594, 605, 1050
BseGI GGATG 2 cut(s) 240, 249
BseLI CCNNNNNNNGG 2 cut(s) 21, 975
BseMI GCAATG 3 cut(s) 905, 960, 1041
BseMII CTCAG 1 cut(s) 75
BseNI ACTGG 1 cut(s) 353
BseRI GAGGAG 3 cut(s) 227, 648, 1176
BseSI GKGCMC 1 cut(s) 275
BseXI GCAGC 5 cut(s) 160, 631, 634, 952, 1116
BshFI GGCC 3 cut(s) 505, 711, 834
BshNI GGYRCC 1 cut(s) 270
BsiHKCI CYCGRG 1 cut(s) 1050
BsiSI CCGG 3 cut(s) 15, 506, 1051
BslFI GGGAC 4 cut(s) 612, 767, 776, 1251
BslI CCNNNNNNNGG 2 cut(s) 21, 975
BsmAI GTCTC 1 cut(s) 363
BsmBI CGTCTC 1 cut(s) 363
BsmFI GGGAC 4 cut(s) 612, 767, 776, 1251
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 3 cut(s) 505, 711, 834
BsoBI CYCGRG 1 cut(s) 1050
Bsp119I TTCGAA 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 275
Bsp143I GATC 5 cut(s) 99, 292, 676, 789, 1111
BspACI CCGC 3 cut(s) 602, 895, 1123
BspANI GGCC 3 cut(s) 505, 711, 834
BspCNI CTCAG 1 cut(s) 76
BspHI TCATGA 1 cut(s) 295
BspLI GGNNCC 4 cut(s) 167, 272, 546, 600
BspMI ACCTGC 1 cut(s) 294
BspT104I TTCGAA 1 cut(s) 119
BspT107I GGYRCC 1 cut(s) 270
BsrBI CCGCTC 1 cut(s) 895
BsrDI GCAATG 3 cut(s) 905, 960, 1041
BsrI ACTGG 1 cut(s) 353
BssECI CCNNGG 5 cut(s) 224, 540, 594, 605, 1050
BssMI GATC 5 cut(s) 99, 292, 676, 789, 1111
BssNAI GTATAC 1 cut(s) 186
BssSI CACGAG 1 cut(s) 1215
BssT1I CCWWGG 1 cut(s) 594
Bst1107I GTATAC 1 cut(s) 186
Bst2BI CACGAG 1 cut(s) 1215
Bst2UI CCWGG 1 cut(s) 606
Bst4CI ACNGT 2 cut(s) 170, 726
Bst6I CTCTTC 1 cut(s) 121
BstBI TTCGAA 1 cut(s) 119
BstC8I GCNNGC 2 cut(s) 411, 995
BstDEI CTNAG 3 cut(s) 84, 661, 1180
BstDSI CCRYGG 1 cut(s) 224
BstF5I GGATG 2 cut(s) 240, 249
BstKTI GATC 5 cut(s) 102, 295, 679, 792, 1114
BstMAI GTCTC 1 cut(s) 363
BstMBI GATC 5 cut(s) 99, 292, 676, 789, 1111
BstMWI GCNNNNNNNGC 4 cut(s) 315, 521, 636, 1129
BstNI CCWGG 1 cut(s) 606
BstNSI RCATGY 1 cut(s) 1226
BstSCI CCNGG 4 cut(s) 505, 604, 1049, 1050
BstSLI GKGCMC 1 cut(s) 275
BstV1I GCAGC 5 cut(s) 160, 631, 634, 952, 1116
BstXI CCANNNNNNTGG 1 cut(s) 707
BstZ17I GTATAC 1 cut(s) 186
BsuRI GGCC 3 cut(s) 505, 711, 834
BtgI CCRYGG 1 cut(s) 224
BtsCI GGATG 2 cut(s) 240, 249
BtsI GCAGTG 1 cut(s) 939
BtsIMutI CAGTG 2 cut(s) 722, 939
BveI ACCTGC 1 cut(s) 294
Cac8I GCNNGC 2 cut(s) 411, 995
CciI TCATGA 1 cut(s) 295
Cfr13I GGNCC 3 cut(s) 544, 599, 833
Cfr9I CCCGGG 1 cut(s) 1050
CseI GACGC 3 cut(s) 345, 499, 850
CspCI CAANNNNNGTGG 4 cut(s) 206, 241, 887, 922
CviAII CATG 9 cut(s) 232, 296, 371, 401, 651, 674, 793, 811, 1223
DdeI CTNAG 3 cut(s) 84, 661, 1180
DpnI GATC 5 cut(s) 101, 294, 678, 791, 1113
DpnII GATC 5 cut(s) 99, 292, 676, 789, 1111
DraI TTTAAA 1 cut(s) 427
DrdI GACNNNNNNGTC 1 cut(s) 944
DseDI GACNNNNNNGTC 1 cut(s) 944
EaeI YGGCCR 1 cut(s) 709
Eam1104I CTCTTC 1 cut(s) 121
EarI CTCTTC 1 cut(s) 121
Eco130I CCWWGG 1 cut(s) 594
Eco32I GATATC 1 cut(s) 589
Eco47I GGWCC 2 cut(s) 544, 599
Eco88I CYCGRG 1 cut(s) 1050
EcoRII CCWGG 1 cut(s) 604
EcoRV GATATC 1 cut(s) 589
EcoT14I CCWWGG 1 cut(s) 594
ErhI CCWWGG 1 cut(s) 594
Esp3I CGTCTC 1 cut(s) 363
FaeI CATG 9 cut(s) 235, 299, 374, 404, 654, 677, 796, 814, 1226
FalI AAGNNNNNCTT 2 cut(s) 519, 551
FaqI GGGAC 4 cut(s) 612, 767, 776, 1251
FatI CATG 9 cut(s) 231, 295, 370, 400, 650, 673, 792, 810, 1222
FbaI TGATCA 2 cut(s) 292, 676
FblI GTMKAC 2 cut(s) 129, 185
Fnu4HI GCNGC 6 cut(s) 174, 645, 648, 896, 966, 1130
FokI GGATG 2 cut(s) 227, 236
Fsp4HI GCNGC 6 cut(s) 174, 645, 648, 896, 966, 1130
FspBI CTAG 4 cut(s) 477, 1233, 1263, 1270
GluI GCNGC 6 cut(s) 174, 645, 648, 896, 966, 1130
HaeIII GGCC 3 cut(s) 505, 711, 834
HapII CCGG 3 cut(s) 15, 506, 1051
HgaI GACGC 3 cut(s) 345, 499, 850
Hin1II CATG 9 cut(s) 235, 299, 374, 404, 654, 677, 796, 814, 1226
HincII GTYRAC 1 cut(s) 130
HindII GTYRAC 1 cut(s) 130
HinfI GANTC 4 cut(s) 814, 866, 880, 1150
HpaII CCGG 3 cut(s) 15, 506, 1051
HphI GGTGA 2 cut(s) 887, 1121
Hpy166II GTNNAC 7 cut(s) 130, 186, 337, 671, 729, 937, 1228
Hpy188I TCNGA 4 cut(s) 544, 688, 919, 1022
Hpy188III TCNNGA 8 cut(s) 103, 296, 362, 419, 477, 827, 1103, 1217
Hpy8I GTNNAC 7 cut(s) 130, 186, 337, 671, 729, 937, 1228
HpyAV CCTTC 4 cut(s) 15, 558, 816, 976
HpyCH4III ACNGT 2 cut(s) 170, 726
HpyCH4IV ACGT 1 cut(s) 1097
HpyCH4V TGCA 7 cut(s) 323, 555, 650, 722, 951, 1091, 1132
HpyF10VI GCNNNNNNNGC 4 cut(s) 315, 521, 636, 1129
HpyF3I CTNAG 3 cut(s) 84, 661, 1180
HpySE526I ACGT 1 cut(s) 1097
Hsp92II CATG 9 cut(s) 235, 299, 374, 404, 654, 677, 796, 814, 1226
Ksp22I TGATCA 2 cut(s) 292, 676
Kzo9I GATC 5 cut(s) 99, 292, 676, 789, 1111
LmnI GCTCC 3 cut(s) 240, 892, 929
Lsp1109I GCAGC 5 cut(s) 160, 631, 634, 952, 1116
MaeI CTAG 4 cut(s) 477, 1233, 1263, 1270
MaeII ACGT 1 cut(s) 1097
MalI GATC 5 cut(s) 101, 294, 678, 791, 1113
MbiI CCGCTC 1 cut(s) 895
MboI GATC 5 cut(s) 99, 292, 676, 789, 1111
MboII GAAGA 5 cut(s) 30, 108, 150, 799, 1082
MhlI GDGCHC 1 cut(s) 275
MlsI TGGCCA 1 cut(s) 711
MluNI TGGCCA 1 cut(s) 711
MlyI GAGTC 1 cut(s) 875
MmeI TCCRAC 2 cut(s) 1121, 1138
Mox20I TGGCCA 1 cut(s) 711
MroXI GAANNNNTTC 2 cut(s) 453, 514
MscI TGGCCA 1 cut(s) 711
MseI TTAA 3 cut(s) 426, 956, 1197
MslI CAYNNNNRTG 3 cut(s) 375, 403, 705
Msp20I TGGCCA 1 cut(s) 711
MspI CCGG 3 cut(s) 15, 506, 1051
MspR9I CCNGG 4 cut(s) 507, 606, 1051, 1052
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 1 cut(s) 606
MwoI GCNNNNNNNGC 4 cut(s) 315, 521, 636, 1129
NciI CCSGG 3 cut(s) 507, 1051, 1052
NdeII GATC 5 cut(s) 99, 292, 676, 789, 1111
NlaIII CATG 9 cut(s) 235, 299, 374, 404, 654, 677, 796, 814, 1226
NlaIV GGNNCC 4 cut(s) 167, 272, 546, 600
NspI RCATGY 1 cut(s) 1226
NspV TTCGAA 1 cut(s) 119
OliI CACNNNNGTG 1 cut(s) 403
PagI TCATGA 1 cut(s) 295
PaqCI CACCTGC 1 cut(s) 294
PctI GAATGC 1 cut(s) 614
PdmI GAANNNNTTC 2 cut(s) 453, 514
PfeI GAWTC 3 cut(s) 814, 880, 1150
PflMI CCANNNNNTGG 1 cut(s) 975
PkrI GCNGC 6 cut(s) 175, 646, 649, 897, 967, 1131
PleI GAGTC 1 cut(s) 874
PpsI GAGTC 1 cut(s) 874
Psp6I CCWGG 1 cut(s) 604
PspGI CCWGG 1 cut(s) 604
PspN4I GGNNCC 4 cut(s) 167, 272, 546, 600
PspPI GGNCC 3 cut(s) 544, 599, 833
RseI CAYNNNNRTG 3 cut(s) 375, 403, 705
SalI GTCGAC 1 cut(s) 128
SaqAI TTAA 3 cut(s) 426, 956, 1197
SatI GCNGC 6 cut(s) 174, 645, 648, 896, 966, 1130
Sau3AI GATC 5 cut(s) 99, 292, 676, 789, 1111
Sau96I GGNCC 3 cut(s) 544, 599, 833
SchI GAGTC 1 cut(s) 875
ScrFI CCNGG 4 cut(s) 507, 606, 1051, 1052
SduI GDGCHC 1 cut(s) 275
SfuI TTCGAA 1 cut(s) 119
SinI GGWCC 2 cut(s) 544, 599
SmaI CCCGGG 1 cut(s) 1052
SmiMI CAYNNNNRTG 3 cut(s) 375, 403, 705
SmlI CTYRAG 1 cut(s) 360
SmoI CTYRAG 1 cut(s) 360
SpeI ACTAGT 1 cut(s) 1232
SsiI CCGC 3 cut(s) 602, 895, 1123
SspMI CTAG 4 cut(s) 477, 1233, 1263, 1270
StyD4I CCNGG 4 cut(s) 505, 604, 1049, 1050
StyI CCWWGG 1 cut(s) 594
TaaI ACNGT 2 cut(s) 170, 726
TaiI ACGT 1 cut(s) 1100
TaqI TCGA 4 cut(s) 119, 129, 255, 1079
TauI GCSGC 1 cut(s) 898
TfiI GAWTC 3 cut(s) 814, 880, 1150
Tru1I TTAA 3 cut(s) 426, 956, 1197
Tru9I TTAA 3 cut(s) 426, 956, 1197
TscAI CASTG 2 cut(s) 729, 939
TseI GCWGC 5 cut(s) 173, 644, 647, 965, 1129
TspDTI ATGAA 6 cut(s) 87, 359, 384, 446, 449, 827
TspGWI ACGGA 1 cut(s) 213
TspMI CCCGGG 1 cut(s) 1050
TspRI CASTG 2 cut(s) 729, 939
Van91I CCANNNNNTGG 1 cut(s) 975
VpaK11BI GGWCC 2 cut(s) 544, 599
XapI RAATTY 2 cut(s) 1063, 1172
XbaI TCTAGA 1 cut(s) 476
XceI RCATGY 1 cut(s) 1226
XcmI CCANNNNNNNNNTGG 2 cut(s) 790, 931
XmaI CCCGGG 1 cut(s) 1050
XmiI GTMKAC 2 cut(s) 129, 185
XmnI GAANNNNTTC 2 cut(s) 453, 514
XspI CTAG 4 cut(s) 477, 1233, 1263, 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.