Rmu_ssc0000387.1_g000032

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000387.1
Physical Location & Seq
Forward (+)
151681 .. 152988
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000387.1_g000032.1.cds

Sequence Viewer

Length: 1308 bp
atggatctcgaccgcaccagaaagagaagatcgtcaccaccaatttggtctaagcttccacctgaactattagggttcatcacgacaaagcttggttcggtagacaccattcgctttaaagtcgtttgcccttcttggaatcgagcagccaaatcttacatctcttctccatgttacaaagtcatggagcaaactccgttgctcatgatccctagccaagaaaagaaggatccccatactcgccgcttcttcagccttgcagagaacaatactttcactctcaaaaacgtgtttcgagattttccggaggcttggtgtgtgggttcatcacacggatggctggtgcttatggacgggacaggaaaactggatctttttaatccgtttactgaagataggattgacctcccatcgctttggtctcttcctcactttgccaaaattaaaactcaccccaacttctccgatgagtcgttcgcgcgcaataccaatttactaaagggctatatgatgggaaaagctgtcacttcttgtaacccatcttgcaacaaggactttgctgttgtgttaactcacaacttgcgaggaagacttgcattttgtaagcatgggaactacagatgtacatggacggacctaggagacgagtctgatcactatagtgatattatcttccacaatggccatttatatacattgacatccggcggttcagttggagtttgggacatgacgaaatcttttcccaccaaattttttgatcttcacccttttgcagaccagtcggagataaacaaagactttccctttgccaaatttgaagttcagcattatttggtggagtcgtcgggcgaccttttatttgtttggcgatttatagtgaagactattgaaggcgaaacgttcccatatagaactttgcactttcatatctttaggctgagttccactagtaaagagtgggagaaagtggaatgtttgcatgaccgggctctgtttttgggtggcaatcattcaatgtcagtatcctcccgagtctttcctgaatgtcaagaaaactcgatttactttacagatgatatttcttatgagatgaatttaaagtacattgctaatgataaggaaggcggtcatgatagaggagtatacaatttaaaagataaggttgtcgagccattaccaggtcaccaattttttgataagtggacaatttatgatccacttcccttctggatttttcccaacccttggccttccacagtgagctacaatgcagcatcaccctcgatatcagggccacgaccttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

435

Amino Acids

50.13

Weight (kDa)

7.26

Isoelectric Point (pI)

41.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1248
AccI GTMKAC 2 cut(s) 102, 1146
AccII CGCG 2 cut(s) 479, 481
AccIII TCCGGA 1 cut(s) 304
AciI CCGC 4 cut(s) 13, 244, 708, 1128
AclI AACGTT 1 cut(s) 902
AclWI GGATC 6 cut(s) 12, 202, 224, 237, 378, 1211
AcoI YGGCCR 1 cut(s) 682
AcsI RAATTY 3 cut(s) 752, 815, 1096
AcuI CTGAAG 2 cut(s) 235, 411
AfaI GTAC 2 cut(s) 625, 1106
AfiI CCNNNNNNNGG 2 cut(s) 1181, 1248
AflIII ACRYGT 1 cut(s) 288
AgsI TTSAA 3 cut(s) 821, 893, 1017
AhlI ACTAGT 1 cut(s) 950
AjnI CCWGG 1 cut(s) 1180
AleI CACNNNNGTG 1 cut(s) 660
AluBI AGCT 4 cut(s) 55, 91, 521, 1266
AluI AGCT 4 cut(s) 55, 91, 521, 1266
Alw26I GTCTC 2 cut(s) 426, 636
AlwI GGATC 6 cut(s) 12, 202, 224, 237, 378, 1211
Ama87I CYCGRG 1 cut(s) 1032
Aor13HI TCCGGA 1 cut(s) 304
AoxI GGCC 3 cut(s) 682, 1250, 1295
ApeKI GCWGC 2 cut(s) 146, 1274
ApoI RAATTY 3 cut(s) 752, 815, 1096
ArsI GACNNNNNNTTYG 6 cut(s) 582, 614, 791, 823, 845, 877
AspA2I CCTAGG 1 cut(s) 637
AspLEI GCGC 2 cut(s) 481, 483
AspS9I GGNCC 2 cut(s) 634, 1295
AsuC2I CCSGG 1 cut(s) 989
AsuHPI GGTGA 5 cut(s) 27, 443, 758, 1178, 1272
AvaI CYCGRG 1 cut(s) 1032
AvaII GGWCC 1 cut(s) 634
AvrII CCTAGG 1 cut(s) 637
BalI TGGCCA 1 cut(s) 684
BamHI GGATCC 1 cut(s) 229
BanII GRGCYC 1 cut(s) 994
BbsI GAAGAC 2 cut(s) 595, 890
BbvI GCAGC 2 cut(s) 158, 1286
BccI CCATC 4 cut(s) 330, 418, 505, 547
BcgI CGANNNNNNTGC 4 cut(s) 765, 799, 1266, 1300
BciT130I CCWGG 1 cut(s) 1182
BciVI GTATCC 1 cut(s) 1036
BclI TGATCA 1 cut(s) 652
BcnI CCSGG 1 cut(s) 989
BcoDI GTCTC 2 cut(s) 426, 636
BcuI ACTAGT 1 cut(s) 950
BfaI CTAG 3 cut(s) 213, 638, 951
BfmI CTRYAG 2 cut(s) 616, 658
BfuI GTATCC 1 cut(s) 1036
BisI GCNGC 3 cut(s) 147, 244, 1275
BlnI CCTAGG 1 cut(s) 637
BlsI GCNGC 3 cut(s) 148, 245, 1276
Bme1390I CCNGG 2 cut(s) 989, 1182
Bme18I GGWCC 1 cut(s) 634
BmeT110I CYCGRG 1 cut(s) 1032
BmgT120I GGNCC 2 cut(s) 634, 1295
BmiI GGNNCC 1 cut(s) 231
BmrFI CCNGG 2 cut(s) 989, 1182
BmsI GCATC 1 cut(s) 1286
BpiI GAAGAC 2 cut(s) 595, 890
BpuMI CCSGG 1 cut(s) 989
BsaI GGTCTC 1 cut(s) 426
BsaJI CCNNGG 2 cut(s) 637, 1247
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 2 cut(s) 1181, 1248
Bse1I ACTGG 2 cut(s) 372, 781
Bse3DI GCAATG 1 cut(s) 1107
BseAI TCCGGA 1 cut(s) 304
BseBI CCWGG 1 cut(s) 1182
BseDI CCNNGG 2 cut(s) 637, 1247
BseGI GGATG 2 cut(s) 341, 701
BseLI CCNNNNNNNGG 2 cut(s) 1181, 1248
BseMI GCAATG 1 cut(s) 1107
BseMII CTCAG 1 cut(s) 932
BseNI ACTGG 2 cut(s) 372, 781
BsePI GCGCGC 1 cut(s) 479
BseRI GAGGAG 1 cut(s) 1155
BseXI GCAGC 2 cut(s) 158, 1286
Bsh1236I CGCG 2 cut(s) 479, 481
Bsh1285I CGRYCG 1 cut(s) 13
BshFI GGCC 3 cut(s) 684, 1252, 1297
BsiEI CGRYCG 1 cut(s) 13
BsiHKCI CYCGRG 1 cut(s) 1032
BsiSI CCGG 3 cut(s) 305, 705, 988
BslFI GGGAC 2 cut(s) 370, 740
BslI CCNNNNNNNGG 2 cut(s) 1181, 1248
BsmAI GTCTC 2 cut(s) 426, 636
BsmBI CGTCTC 1 cut(s) 636
BsmFI GGGAC 2 cut(s) 370, 740
BsnI GGCC 3 cut(s) 684, 1252, 1297
Bso31I GGTCTC 1 cut(s) 426
BsoBI CYCGRG 1 cut(s) 1032
Bsp1286I GDGCHC 1 cut(s) 994
Bsp13I TCCGGA 1 cut(s) 304
Bsp1407I TGTACA 1 cut(s) 623
Bsp143I GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
BspACI CCGC 4 cut(s) 13, 244, 708, 1128
BspANI GGCC 3 cut(s) 684, 1252, 1297
BspCNI CTCAG 1 cut(s) 933
BspEI TCCGGA 1 cut(s) 304
BspFNI CGCG 2 cut(s) 479, 481
BspHI TCATGA 2 cut(s) 204, 1132
BspLI GGNNCC 1 cut(s) 231
BspPI GGATC 6 cut(s) 12, 202, 224, 237, 378, 1211
BspTNI GGTCTC 1 cut(s) 426
BsrDI GCAATG 1 cut(s) 1107
BsrGI TGTACA 1 cut(s) 623
BsrI ACTGG 2 cut(s) 372, 781
BssECI CCNNGG 2 cut(s) 637, 1247
BssHII GCGCGC 1 cut(s) 479
BssMI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
BssNAI GTATAC 1 cut(s) 1147
BssT1I CCWWGG 2 cut(s) 637, 1247
Bst1107I GTATAC 1 cut(s) 1147
Bst2UI CCWGG 1 cut(s) 1182
Bst4CI ACNGT 1 cut(s) 1261
Bst6I CTCTTC 2 cut(s) 169, 429
BstAUI TGTACA 1 cut(s) 623
BstC8I GCNNGC 1 cut(s) 481
BstDEI CTNAG 2 cut(s) 51, 941
BstEII GGTNACC 1 cut(s) 1184
BstF5I GGATG 2 cut(s) 341, 701
BstFNI CGCG 2 cut(s) 479, 481
BstHHI GCGC 2 cut(s) 481, 483
BstKTI GATC 8 cut(s) 7, 32, 210, 232, 373, 655, 763, 1219
BstMAI GTCTC 2 cut(s) 426, 636
BstMBI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
BstMCI CGRYCG 1 cut(s) 13
BstMWI GCNNNNNNNGC 1 cut(s) 252
BstNI CCWGG 1 cut(s) 1182
BstPI GGTNACC 1 cut(s) 1184
BstSCI CCNGG 2 cut(s) 987, 1180
BstSFI CTRYAG 2 cut(s) 616, 658
BstUI CGCG 2 cut(s) 479, 481
BstV1I GCAGC 2 cut(s) 158, 1286
BstV2I GAAGAC 2 cut(s) 595, 890
BstX2I RGATCY 3 cut(s) 4, 229, 370
BstXI CCANNNNNNTGG 2 cut(s) 45, 417
BstYI RGATCY 3 cut(s) 4, 229, 370
BstZ17I GTATAC 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 1036
BsuRI GGCC 3 cut(s) 684, 1252, 1297
BtgZI GCGATG 1 cut(s) 396
BtsCI GGATG 2 cut(s) 341, 701
BtsIMutI CAGTG 1 cut(s) 1266
Cac8I GCNNGC 1 cut(s) 481
CciI TCATGA 2 cut(s) 204, 1132
CfoI GCGC 2 cut(s) 481, 483
Cfr13I GGNCC 2 cut(s) 634, 1295
CsiI ACCWGGT 1 cut(s) 1180
Csp6I GTAC 2 cut(s) 624, 1105
CviAII CATG 8 cut(s) 171, 184, 205, 608, 627, 730, 983, 1133
CviQI GTAC 2 cut(s) 624, 1105
DdeI CTNAG 2 cut(s) 51, 941
DpnI GATC 8 cut(s) 6, 31, 209, 231, 372, 654, 762, 1218
DpnII GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
DraI TTTAAA 3 cut(s) 118, 1101, 1155
EaeI YGGCCR 1 cut(s) 682
Eam1104I CTCTTC 2 cut(s) 169, 429
EarI CTCTTC 2 cut(s) 169, 429
Eco130I CCWWGG 2 cut(s) 637, 1247
Eco24I GRGCYC 1 cut(s) 994
Eco31I GGTCTC 1 cut(s) 426
Eco32I GATATC 1 cut(s) 1290
Eco47I GGWCC 1 cut(s) 634
Eco57I CTGAAG 2 cut(s) 235, 411
Eco88I CYCGRG 1 cut(s) 1032
Eco91I GGTNACC 1 cut(s) 1184
EcoO65I GGTNACC 1 cut(s) 1184
EcoRII CCWGG 1 cut(s) 1180
EcoRV GATATC 1 cut(s) 1290
EcoT14I CCWWGG 2 cut(s) 637, 1247
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 2 cut(s) 637, 1247
Esp3I CGTCTC 1 cut(s) 636
FaeI CATG 8 cut(s) 174, 187, 208, 611, 630, 733, 986, 1136
FaqI GGGAC 2 cut(s) 370, 740
FatI CATG 8 cut(s) 170, 183, 204, 607, 626, 729, 982, 1132
FbaI TGATCA 1 cut(s) 652
FblI GTMKAC 2 cut(s) 102, 1146
Fnu4HI GCNGC 3 cut(s) 147, 244, 1275
FokI GGATG 2 cut(s) 348, 688
FriOI GRGCYC 1 cut(s) 994
Fsp4HI GCNGC 3 cut(s) 147, 244, 1275
FspBI CTAG 3 cut(s) 213, 638, 951
GlaI GCGC 2 cut(s) 480, 482
GluI GCNGC 3 cut(s) 147, 244, 1275
HaeIII GGCC 3 cut(s) 684, 1252, 1297
HapII CCGG 3 cut(s) 305, 705, 988
HhaI GCGC 2 cut(s) 481, 483
Hin1II CATG 8 cut(s) 174, 187, 208, 611, 630, 733, 986, 1136
Hin6I GCGC 2 cut(s) 479, 481
HinP1I GCGC 2 cut(s) 479, 481
HincII GTYRAC 1 cut(s) 570
HindII GTYRAC 1 cut(s) 570
HindIII AAGCTT 2 cut(s) 53, 89
HinfI GANTC 5 cut(s) 139, 470, 647, 842, 1035
HpaI GTTAAC 1 cut(s) 570
HpaII CCGG 3 cut(s) 305, 705, 988
HphI GGTGA 5 cut(s) 27, 443, 758, 1178, 1272
Hpy166II GTNNAC 5 cut(s) 103, 387, 570, 1147, 1206
Hpy188I TCNGA 3 cut(s) 466, 652, 787
Hpy8I GTNNAC 5 cut(s) 103, 387, 570, 1147, 1206
Hpy99I CGWCG 1 cut(s) 850
HpyAV CCTTC 6 cut(s) 141, 220, 887, 1118, 1237, 1263
HpyCH4III ACNGT 1 cut(s) 1261
HpyCH4IV ACGT 2 cut(s) 288, 902
HpyCH4V TGCA 7 cut(s) 260, 546, 596, 776, 922, 982, 1274
HpyF10VI GCNNNNNNNGC 1 cut(s) 252
HpyF3I CTNAG 2 cut(s) 51, 941
HpySE526I ACGT 2 cut(s) 288, 902
Hsp92II CATG 8 cut(s) 174, 187, 208, 611, 630, 733, 986, 1136
HspAI GCGC 2 cut(s) 479, 481
Kpn2I TCCGGA 1 cut(s) 304
Ksp22I TGATCA 1 cut(s) 652
KspAI GTTAAC 1 cut(s) 570
Kzo9I GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
LmnI GCTCC 1 cut(s) 187
Lsp1109I GCAGC 2 cut(s) 158, 1286
LweI GCATC 1 cut(s) 1286
MabI ACCWGGT 1 cut(s) 1180
MaeI CTAG 3 cut(s) 213, 638, 951
MaeII ACGT 2 cut(s) 288, 902
MaeIII GTNAC 5 cut(s) 33, 173, 523, 533, 1184
MalI GATC 8 cut(s) 6, 31, 209, 231, 372, 654, 762, 1218
MboI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
MboII GAAGA 9 cut(s) 39, 156, 241, 404, 416, 600, 664, 755, 895
MflI RGATCY 3 cut(s) 4, 229, 370
MhlI GDGCHC 1 cut(s) 994
MlsI TGGCCA 1 cut(s) 684
MluCI AATT 9 cut(s) 42, 441, 490, 752, 815, 1096, 1150, 1190, 1209
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 4 cut(s) 479, 656, 851, 1044
MmeI TCCRAC 2 cut(s) 697, 765
MnlI CCTC 7 cut(s) 301, 416, 438, 578, 1039, 1133, 1294
Mox20I TGGCCA 1 cut(s) 684
MroI TCCGGA 1 cut(s) 304
MscI TGGCCA 1 cut(s) 684
MseI TTAA 6 cut(s) 117, 378, 444, 569, 1100, 1154
MslI CAYNNNNRTG 2 cut(s) 334, 660
Msp20I TGGCCA 1 cut(s) 684
MspI CCGG 3 cut(s) 305, 705, 988
MspR9I CCNGG 2 cut(s) 989, 1182
MvaI CCWGG 1 cut(s) 1182
MvnI CGCG 2 cut(s) 479, 481
MwoI GCNNNNNNNGC 1 cut(s) 252
NciI CCSGG 1 cut(s) 989
NdeII GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
NlaIII CATG 8 cut(s) 174, 187, 208, 611, 630, 733, 986, 1136
NlaIV GGNNCC 1 cut(s) 231
NmuCI GTSAC 3 cut(s) 33, 523, 1184
OliI CACNNNNGTG 1 cut(s) 660
PagI TCATGA 2 cut(s) 204, 1132
PauI GCGCGC 1 cut(s) 479
PfeI GAWTC 1 cut(s) 139
PflMI CCANNNNNTGG 1 cut(s) 1248
PkrI GCNGC 3 cut(s) 148, 245, 1276
PleI GAGTC 4 cut(s) 478, 655, 850, 1043
PpsI GAGTC 4 cut(s) 478, 655, 850, 1043
Psp1406I AACGTT 1 cut(s) 902
Psp6I CCWGG 1 cut(s) 1180
PspEI GGTNACC 1 cut(s) 1184
PspGI CCWGG 1 cut(s) 1180
PspN4I GGNNCC 1 cut(s) 231
PspPI GGNCC 2 cut(s) 634, 1295
PsuI RGATCY 3 cut(s) 4, 229, 370
PteI GCGCGC 1 cut(s) 479
RsaI GTAC 2 cut(s) 625, 1106
RsaNI GTAC 2 cut(s) 624, 1105
RseI CAYNNNNRTG 2 cut(s) 334, 660
SaqAI TTAA 6 cut(s) 117, 378, 444, 569, 1100, 1154
SatI GCNGC 3 cut(s) 147, 244, 1275
Sau3AI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 760, 1216
Sau96I GGNCC 2 cut(s) 634, 1295
SchI GAGTC 4 cut(s) 479, 656, 851, 1044
ScrFI CCNGG 2 cut(s) 989, 1182
SduI GDGCHC 1 cut(s) 994
SexAI ACCWGGT 1 cut(s) 1180
SfaNI GCATC 1 cut(s) 1286
SfcI CTRYAG 2 cut(s) 616, 658
SinI GGWCC 1 cut(s) 634
SmiMI CAYNNNNRTG 2 cut(s) 334, 660
SpeI ACTAGT 1 cut(s) 950
Sse9I AATT 9 cut(s) 42, 441, 490, 752, 815, 1096, 1150, 1190, 1209
SsiI CCGC 4 cut(s) 13, 244, 708, 1128
SspMI CTAG 3 cut(s) 213, 638, 951
StyD4I CCNGG 2 cut(s) 987, 1180
StyI CCWWGG 2 cut(s) 637, 1247
TaaI ACNGT 1 cut(s) 1261
TaiI ACGT 2 cut(s) 291, 905
TaqI TCGA 6 cut(s) 9, 142, 295, 1061, 1170, 1286
TasI AATT 9 cut(s) 42, 441, 490, 752, 815, 1096, 1150, 1190, 1209
TatI WGTACW 2 cut(s) 623, 1104
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 6 cut(s) 117, 378, 444, 569, 1100, 1154
Tru9I TTAA 6 cut(s) 117, 378, 444, 569, 1100, 1154
TscAI CASTG 1 cut(s) 1266
TseFI GTSAC 3 cut(s) 33, 523, 1184
TseI GCWGC 2 cut(s) 146, 1274
Tsp45I GTSAC 3 cut(s) 33, 523, 1184
TspDTI ATGAA 4 cut(s) 67, 315, 917, 1109
TspGWI ACGGA 4 cut(s) 186, 348, 372, 647
TspRI CASTG 1 cut(s) 1266
Van91I CCANNNNNTGG 1 cut(s) 1248
VpaK11BI GGWCC 1 cut(s) 634
XapI RAATTY 3 cut(s) 752, 815, 1096
XcmI CCANNNNNNNNNTGG 1 cut(s) 1227
XmaJI CCTAGG 1 cut(s) 637
XmiI GTMKAC 2 cut(s) 102, 1146
XspI CTAG 3 cut(s) 213, 638, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.