RLG00000009640

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
55762846 .. 55764153
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009640

Sequence Viewer

Length: 1308 bp
ATGGATCTCGACTACACCAGAAAGAGAAGATCGTCACCACCAATTTGGTCTAAGCTTCCACCTGAACTATTAGGGTTCATCACGACAAAGCTTGGTTCGGTAGACACCATTCGCTTTAAAGTCGTTTGCCCTTCTTGGAATCGAGCAGCCAAATCTTACATCTCTTCTCCATCTTACAAAGTCATGGAGCAAACTCCGTTGCTCATGATCCCTAGCCAAGAAAAGAAAGATCTCCATACTCGCCGCTTCTTCAGCCTTGCAGAGAACAATACTTTCACTCTCAAAAACGTGTTTCGAGATTTTCCGGAGGCTTGGTGTGTGGGTTCATCACACGGATGGCTGGTGCTTATGGATGGTACAGGAAAACTGGATCTTTTTAATCCGTTTACTGAAGATAGGATTGAACTCCCATCGCTTTGGACTCTTCCACGCTTTGCCAAAATTAAAACTCTCGCCAACTTCTCCGATGAGTCGTTCGCGCGCAATACCAATTTATTGAAGGGCTATATAATGGGAAGAGCTGTCACTTCTTGTAACCCGTCTTGCAACAAGGACTTTGCTGTTGTGATAACTCACAGCTTGCAAGGAAGACTTGCATTTTGTAAGCATGGGAACAACAGTTGTACATGGACTGACCTAGGAGACGAGTCTGATCACTATAGTGATATTATCTTCCACAATGGCCATTTATACACATTGACATCCGGCGGTTCAGTTGGAGTTTGGGACATGACGAAATCTTTTCCCACCAAAATTTTTTATCTGCACCCTTTTGCAGACCAGTCGGAGATAAATAAAGACTTTCCCTTTGCCAAATTTGATGTTCAGCATTATTTGGTGGAGTCGTCGGGCGACCTTTTATTTGTTTGGCGATTTATAGTGAAGACTATTGAAGGCGAAACGTTCCCATATAGAACCTTGCACTTTCATATCTTTAGGCTGAGTTCCACTAGTAAAGAGTGGGAGAAAGTGGAATGTTTGCATGACCGGGCTCTGTTTTTGGGTGGCAATCATTCAATGTCAGTATCCTCCCGAGTCTTTCCTGAGTGTCAAGAAAACTCGATTTACTTTACAGATGATAATTCTTATGAGATGTATTCAAAGTACATTGCTAATGATCAGGAAGGCGGTCATGATATGGGAGTATACAGTTTAAAAGATGAGGTTGTCGAGCCATTACCAGGTCACCAATATTTTGATAAGTGGACAATTTATGATCCACTTCCCTTCTGGATTTTTCCAAACCCTTGGCCTTCCACAGTGAGCTACAATGCAGCATCACCCTCGCTATCAGGGCCACGACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

436

Amino Acids

49.96

Weight (kDa)

6.31

Isoelectric Point (pI)

45.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 83 - 384 3.3e-62 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 102, 1146
AccII CGCG 2 cut(s) 479, 481
AccIII TCCGGA 1 cut(s) 304
AciI CCGC 3 cut(s) 244, 708, 1128
AclI AACGTT 1 cut(s) 902
AclWI GGATC 4 cut(s) 12, 202, 378, 1211
AcoI YGGCCR 1 cut(s) 682
AcsI RAATTY 2 cut(s) 753, 815
AcuI CTGAAG 2 cut(s) 235, 411
AfaI GTAC 3 cut(s) 358, 625, 1106
AfiI CCNNNNNNNGG 1 cut(s) 1181
AflIII ACRYGT 1 cut(s) 288
AgsI TTSAA 5 cut(s) 404, 499, 893, 1017, 1101
AhlI ACTAGT 1 cut(s) 950
AjnI CCWGG 1 cut(s) 1180
AleI CACNNNNGTG 1 cut(s) 660
AluBI AGCT 5 cut(s) 55, 91, 521, 579, 1266
AluI AGCT 5 cut(s) 55, 91, 521, 579, 1266
Alw26I GTCTC 1 cut(s) 636
AlwI GGATC 4 cut(s) 12, 202, 378, 1211
Ama87I CYCGRG 1 cut(s) 1032
Aor13HI TCCGGA 1 cut(s) 304
AoxI GGCC 3 cut(s) 682, 1250, 1295
ApeKI GCWGC 2 cut(s) 146, 1274
ApoI RAATTY 2 cut(s) 753, 815
ArsI GACNNNNNNTTYG 6 cut(s) 582, 614, 791, 823, 845, 877
AspA2I CCTAGG 1 cut(s) 637
AspLEI GCGC 2 cut(s) 481, 483
AspS9I GGNCC 1 cut(s) 1295
AsuC2I CCSGG 1 cut(s) 989
AsuHPI GGTGA 3 cut(s) 27, 1178, 1272
AvaI CYCGRG 1 cut(s) 1032
AvrII CCTAGG 1 cut(s) 637
BalI TGGCCA 1 cut(s) 684
BanII GRGCYC 1 cut(s) 994
BbsI GAAGAC 2 cut(s) 595, 890
BbvI GCAGC 2 cut(s) 158, 1286
BccI CCATC 4 cut(s) 178, 330, 347, 418
BcgI CGANNNNNNTGC 4 cut(s) 765, 799, 1266, 1300
BciT130I CCWGG 1 cut(s) 1182
BciVI GTATCC 1 cut(s) 1036
BclI TGATCA 2 cut(s) 652, 1117
BcnI CCSGG 1 cut(s) 989
BcoDI GTCTC 1 cut(s) 636
BcuI ACTAGT 1 cut(s) 950
BfaI CTAG 3 cut(s) 213, 638, 951
BfmI CTRYAG 1 cut(s) 658
BfuI GTATCC 1 cut(s) 1036
BglII AGATCT 1 cut(s) 229
BisI GCNGC 3 cut(s) 147, 244, 1275
BlnI CCTAGG 1 cut(s) 637
BlsI GCNGC 3 cut(s) 148, 245, 1276
Bme1390I CCNGG 2 cut(s) 989, 1182
BmeT110I CYCGRG 1 cut(s) 1032
BmgT120I GGNCC 1 cut(s) 1295
BmrFI CCNGG 2 cut(s) 989, 1182
BmsI GCATC 1 cut(s) 1286
BpiI GAAGAC 2 cut(s) 595, 890
BpuMI CCSGG 1 cut(s) 989
BsaJI CCNNGG 2 cut(s) 637, 1247
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 1 cut(s) 1181
Bse1I ACTGG 2 cut(s) 372, 781
Bse3DI GCAATG 1 cut(s) 1107
BseAI TCCGGA 1 cut(s) 304
BseBI CCWGG 1 cut(s) 1182
BseDI CCNNGG 2 cut(s) 637, 1247
BseGI GGATG 3 cut(s) 341, 358, 701
BseLI CCNNNNNNNGG 1 cut(s) 1181
BseMI GCAATG 1 cut(s) 1107
BseMII CTCAG 2 cut(s) 932, 1035
BseNI ACTGG 2 cut(s) 372, 781
BsePI GCGCGC 1 cut(s) 479
BseXI GCAGC 2 cut(s) 158, 1286
BsgI GTGCAG 1 cut(s) 749
Bsh1236I CGCG 2 cut(s) 479, 481
BshFI GGCC 3 cut(s) 684, 1252, 1297
BsiHKCI CYCGRG 1 cut(s) 1032
BsiSI CCGG 3 cut(s) 305, 705, 988
BslFI GGGAC 1 cut(s) 740
BslI CCNNNNNNNGG 1 cut(s) 1181
BsmAI GTCTC 1 cut(s) 636
BsmBI CGTCTC 1 cut(s) 636
BsmFI GGGAC 1 cut(s) 740
BsnI GGCC 3 cut(s) 684, 1252, 1297
BsoBI CYCGRG 1 cut(s) 1032
Bsp1286I GDGCHC 1 cut(s) 994
Bsp13I TCCGGA 1 cut(s) 304
Bsp1407I TGTACA 1 cut(s) 623
Bsp143I GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
BspACI CCGC 3 cut(s) 244, 708, 1128
BspANI GGCC 3 cut(s) 684, 1252, 1297
BspCNI CTCAG 2 cut(s) 933, 1036
BspEI TCCGGA 1 cut(s) 304
BspFNI CGCG 2 cut(s) 479, 481
BspHI TCATGA 2 cut(s) 204, 1132
BspPI GGATC 4 cut(s) 12, 202, 378, 1211
BspQI GCTCTTC 1 cut(s) 511
BsrDI GCAATG 1 cut(s) 1107
BsrGI TGTACA 1 cut(s) 623
BsrI ACTGG 2 cut(s) 372, 781
BssECI CCNNGG 2 cut(s) 637, 1247
BssHII GCGCGC 1 cut(s) 479
BssMI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
BssNAI GTATAC 1 cut(s) 1147
BssT1I CCWWGG 2 cut(s) 637, 1247
Bst1107I GTATAC 1 cut(s) 1147
Bst2UI CCWGG 1 cut(s) 1182
Bst4CI ACNGT 3 cut(s) 620, 1151, 1261
Bst6I CTCTTC 3 cut(s) 169, 429, 511
BstAUI TGTACA 1 cut(s) 623
BstC8I GCNNGC 2 cut(s) 481, 581
BstDEI CTNAG 3 cut(s) 51, 941, 1044
BstEII GGTNACC 1 cut(s) 1184
BstF5I GGATG 3 cut(s) 341, 358, 701
BstFNI CGCG 2 cut(s) 479, 481
BstHHI GCGC 2 cut(s) 481, 483
BstKTI GATC 8 cut(s) 7, 32, 210, 232, 373, 655, 1120, 1219
BstMAI GTCTC 1 cut(s) 636
BstMBI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
BstMWI GCNNNNNNNGC 2 cut(s) 252, 1294
BstNI CCWGG 1 cut(s) 1182
BstPI GGTNACC 1 cut(s) 1184
BstSCI CCNGG 2 cut(s) 987, 1180
BstSFI CTRYAG 1 cut(s) 658
BstUI CGCG 2 cut(s) 479, 481
BstV1I GCAGC 2 cut(s) 158, 1286
BstV2I GAAGAC 2 cut(s) 595, 890
BstX2I RGATCY 3 cut(s) 4, 229, 370
BstXI CCANNNNNNTGG 3 cut(s) 45, 417, 1248
BstYI RGATCY 3 cut(s) 4, 229, 370
BstZ17I GTATAC 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 1036
BsuRI GGCC 3 cut(s) 684, 1252, 1297
BtgZI GCGATG 1 cut(s) 396
BtsCI GGATG 3 cut(s) 341, 358, 701
BtsIMutI CAGTG 1 cut(s) 1266
Cac8I GCNNGC 2 cut(s) 481, 581
CciI TCATGA 2 cut(s) 204, 1132
CfoI GCGC 2 cut(s) 481, 483
Cfr13I GGNCC 1 cut(s) 1295
CsiI ACCWGGT 1 cut(s) 1180
Csp6I GTAC 3 cut(s) 357, 624, 1105
CviAII CATG 7 cut(s) 184, 205, 608, 627, 730, 983, 1133
CviQI GTAC 3 cut(s) 357, 624, 1105
DdeI CTNAG 3 cut(s) 51, 941, 1044
DpnI GATC 8 cut(s) 6, 31, 209, 231, 372, 654, 1119, 1218
DpnII GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
DraI TTTAAA 2 cut(s) 118, 1155
EaeI YGGCCR 1 cut(s) 682
Eam1104I CTCTTC 3 cut(s) 169, 429, 511
EarI CTCTTC 3 cut(s) 169, 429, 511
Eco130I CCWWGG 2 cut(s) 637, 1247
Eco24I GRGCYC 1 cut(s) 994
Eco57I CTGAAG 2 cut(s) 235, 411
Eco88I CYCGRG 1 cut(s) 1032
Eco91I GGTNACC 1 cut(s) 1184
EcoO65I GGTNACC 1 cut(s) 1184
EcoRII CCWGG 1 cut(s) 1180
EcoT14I CCWWGG 2 cut(s) 637, 1247
EcoT38I GRGCYC 1 cut(s) 994
ErhI CCWWGG 2 cut(s) 637, 1247
Esp3I CGTCTC 1 cut(s) 636
FaeI CATG 7 cut(s) 187, 208, 611, 630, 733, 986, 1136
FalI AAGNNNNNCTT 2 cut(s) 576, 608
FaqI GGGAC 1 cut(s) 740
FatI CATG 7 cut(s) 183, 204, 607, 626, 729, 982, 1132
FbaI TGATCA 2 cut(s) 652, 1117
FblI GTMKAC 2 cut(s) 102, 1146
Fnu4HI GCNGC 3 cut(s) 147, 244, 1275
FokI GGATG 3 cut(s) 348, 365, 688
FriOI GRGCYC 1 cut(s) 994
Fsp4HI GCNGC 3 cut(s) 147, 244, 1275
FspBI CTAG 3 cut(s) 213, 638, 951
GlaI GCGC 2 cut(s) 480, 482
GluI GCNGC 3 cut(s) 147, 244, 1275
HaeIII GGCC 3 cut(s) 684, 1252, 1297
HapII CCGG 3 cut(s) 305, 705, 988
HhaI GCGC 2 cut(s) 481, 483
Hin1II CATG 7 cut(s) 187, 208, 611, 630, 733, 986, 1136
Hin6I GCGC 2 cut(s) 479, 481
HinP1I GCGC 2 cut(s) 479, 481
HindIII AAGCTT 2 cut(s) 53, 89
HinfI GANTC 6 cut(s) 139, 421, 470, 647, 842, 1035
HpaII CCGG 3 cut(s) 305, 705, 988
HphI GGTGA 3 cut(s) 27, 1178, 1272
Hpy166II GTNNAC 4 cut(s) 103, 387, 1147, 1206
Hpy188I TCNGA 3 cut(s) 466, 652, 787
Hpy8I GTNNAC 4 cut(s) 103, 387, 1147, 1206
Hpy99I CGWCG 1 cut(s) 850
HpyAV CCTTC 6 cut(s) 141, 493, 887, 1118, 1237, 1263
HpyCH4III ACNGT 3 cut(s) 620, 1151, 1261
HpyCH4IV ACGT 2 cut(s) 288, 902
HpyCH4V TGCA 9 cut(s) 260, 546, 583, 596, 766, 776, 922, 982, 1274
HpyF10VI GCNNNNNNNGC 2 cut(s) 252, 1294
HpyF3I CTNAG 3 cut(s) 51, 941, 1044
HpySE526I ACGT 2 cut(s) 288, 902
Hsp92II CATG 7 cut(s) 187, 208, 611, 630, 733, 986, 1136
HspAI GCGC 2 cut(s) 479, 481
Kpn2I TCCGGA 1 cut(s) 304
Ksp22I TGATCA 2 cut(s) 652, 1117
Kzo9I GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
LguI GCTCTTC 1 cut(s) 511
LmnI GCTCC 1 cut(s) 187
Lsp1109I GCAGC 2 cut(s) 158, 1286
LweI GCATC 1 cut(s) 1286
MabI ACCWGGT 1 cut(s) 1180
MaeI CTAG 3 cut(s) 213, 638, 951
MaeII ACGT 2 cut(s) 288, 902
MaeIII GTNAC 4 cut(s) 33, 523, 533, 1184
MalI GATC 8 cut(s) 6, 31, 209, 231, 372, 654, 1119, 1218
MboI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
MboII GAAGA 9 cut(s) 39, 156, 241, 404, 416, 528, 600, 664, 895
MflI RGATCY 3 cut(s) 4, 229, 370
MhlI GDGCHC 1 cut(s) 994
MlsI TGGCCA 1 cut(s) 684
MluCI AATT 7 cut(s) 42, 441, 490, 753, 815, 1081, 1209
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 5 cut(s) 415, 479, 656, 851, 1044
MmeI TCCRAC 2 cut(s) 697, 765
MnlI CCTC 4 cut(s) 301, 1039, 1156, 1294
Mox20I TGGCCA 1 cut(s) 684
MroI TCCGGA 1 cut(s) 304
MscI TGGCCA 1 cut(s) 684
MseI TTAA 4 cut(s) 117, 378, 444, 1154
MslI CAYNNNNRTG 2 cut(s) 334, 660
Msp20I TGGCCA 1 cut(s) 684
MspI CCGG 3 cut(s) 305, 705, 988
MspR9I CCNGG 2 cut(s) 989, 1182
MvaI CCWGG 1 cut(s) 1182
MvnI CGCG 2 cut(s) 479, 481
MwoI GCNNNNNNNGC 2 cut(s) 252, 1294
NciI CCSGG 1 cut(s) 989
NdeII GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
NlaIII CATG 7 cut(s) 187, 208, 611, 630, 733, 986, 1136
NmuCI GTSAC 3 cut(s) 33, 523, 1184
OliI CACNNNNGTG 1 cut(s) 660
PagI TCATGA 2 cut(s) 204, 1132
PauI GCGCGC 1 cut(s) 479
PciSI GCTCTTC 1 cut(s) 511
PfeI GAWTC 1 cut(s) 139
PkrI GCNGC 3 cut(s) 148, 245, 1276
PleI GAGTC 5 cut(s) 415, 478, 655, 850, 1043
PpsI GAGTC 5 cut(s) 415, 478, 655, 850, 1043
Psp1406I AACGTT 1 cut(s) 902
Psp6I CCWGG 1 cut(s) 1180
PspEI GGTNACC 1 cut(s) 1184
PspGI CCWGG 1 cut(s) 1180
PspPI GGNCC 1 cut(s) 1295
PsuI RGATCY 3 cut(s) 4, 229, 370
PteI GCGCGC 1 cut(s) 479
RsaI GTAC 3 cut(s) 358, 625, 1106
RsaNI GTAC 3 cut(s) 357, 624, 1105
RseI CAYNNNNRTG 2 cut(s) 334, 660
SapI GCTCTTC 1 cut(s) 511
SaqAI TTAA 4 cut(s) 117, 378, 444, 1154
SatI GCNGC 3 cut(s) 147, 244, 1275
Sau3AI GATC 8 cut(s) 4, 29, 207, 229, 370, 652, 1117, 1216
Sau96I GGNCC 1 cut(s) 1295
SchI GAGTC 5 cut(s) 415, 479, 656, 851, 1044
ScrFI CCNGG 2 cut(s) 989, 1182
SduI GDGCHC 1 cut(s) 994
SexAI ACCWGGT 1 cut(s) 1180
SfaNI GCATC 1 cut(s) 1286
SfcI CTRYAG 1 cut(s) 658
SmiMI CAYNNNNRTG 2 cut(s) 334, 660
SpeI ACTAGT 1 cut(s) 950
Sse9I AATT 7 cut(s) 42, 441, 490, 753, 815, 1081, 1209
SsiI CCGC 3 cut(s) 244, 708, 1128
SspI AATATT 1 cut(s) 1193
SspMI CTAG 3 cut(s) 213, 638, 951
StyD4I CCNGG 2 cut(s) 987, 1180
StyI CCWWGG 2 cut(s) 637, 1247
TaaI ACNGT 3 cut(s) 620, 1151, 1261
TaiI ACGT 2 cut(s) 291, 905
TaqI TCGA 5 cut(s) 9, 142, 295, 1061, 1170
TasI AATT 7 cut(s) 42, 441, 490, 753, 815, 1081, 1209
TatI WGTACW 2 cut(s) 623, 1104
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 4 cut(s) 117, 378, 444, 1154
Tru9I TTAA 4 cut(s) 117, 378, 444, 1154
TscAI CASTG 1 cut(s) 1266
TseFI GTSAC 3 cut(s) 33, 523, 1184
TseI GCWGC 2 cut(s) 146, 1274
Tsp45I GTSAC 3 cut(s) 33, 523, 1184
TspDTI ATGAA 3 cut(s) 67, 315, 917
TspGWI ACGGA 3 cut(s) 186, 348, 372
TspRI CASTG 1 cut(s) 1266
XapI RAATTY 2 cut(s) 753, 815
XcmI CCANNNNNNNNNTGG 1 cut(s) 1227
XmaJI CCTAGG 1 cut(s) 637
XmiI GTMKAC 2 cut(s) 102, 1146
XspI CTAG 3 cut(s) 213, 638, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.