Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000700

Physical Location & Seq

Genomic Coordinates Reverse (-)

37049450 .. 37052119

Gene Structure 2670 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00313550.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGGGATGATCAGCAAGAGGAGGAGATCACCATGGTGGGAAGGATCGGCCCATGCAACGTCGGTCGGGCAATCCGGAGGTTCGGCGGAGCGGAGCAAGCATCCGGGCCTGGGAGCAAAGCGGGCAGGGCCAGGGTCGCTCGGCGTGGCTGAGCACAAGGAGGGCCGGGTCGCCGGCGGAGGTGGCCGGAGGAAGAAGAAAAAGTCGGAACTACTAGAGTTGATCATGAAAAAGCTTACTTCTGTGGACATCCTTCGCTTTGAAGCTGTCTGTTCTTGTTGGAATCAAGCTGCAAAATCTTATATCTCTGCCCCATATTTCACACTCGACATGCCTCAAACCCCATGGCTTATGATTCCTGGTGGTGAAGAAAACCATGTCCATACTCGCCGCTTCTTCAACCTCGCAGAGTTCAAGTACTACACTATCAATAACGCGTTTGGAGATATTCCTGATGCCTGGTGTGTCGGTTCATCACATGGGTGGCTGGTCCTTACGGAGGAGAAAGGAACTGCTTTTCTTTTTAATCCGTTTTCTGGAGATAGGATTGAACTCCCATCAATATGGACACTGCATCCAGTCATAAGCAAGGATTATATCGCCAAAGCTGTCACCTCCTCCAAGCCACCATCGTCGTCATCCTCGTCTTCCAGTAAGGACTTCGTTGTTGCAATAATACTCTACTCTAATACGTGGATAACGCAACTTGCTTTCCATAGGCATGGAGACGATGCATGGACTGGCTTCGGCCAGAAGGGTACTGTCTATCATGACGGTATGTTCCACAGTACTAGTGGTCATTTTTTTGCATTGGCAACCGATTGCTCAGTTGAGGTTTGGGACTTGAGGAAATGTTTTCCCATAAAAACACTTCATCTGCAACCCCTTCTACACCGCCAATTAAACAATGACGATGATTTCAAATTTGATATTCAGAATTATTTGGTGGAGTCCTTGGGTGAAATTTTGTTGGTGAGGCGATTTATAGTGACGAAATTTTTTTATCATAAGGACCTACCCGATGTTATTCGTCCCTATAGAACCTCTCACTTTTATATCTACAGGCAGAAGTCCACTAGCTTAGGGTTCGAGTGGGAGAAGGTGGAAAGTTTGCACAATCGGGCTGTGTTTCTGGGTGGAAATCATTCAATGTCGTTATCCTCCCGGAACTTTCCAGAATGTGAAGAGAACTCAATTTACTTCACAGATCATAGGTGGGAAATGAACCCTAATAAATGCTTATCTGGTAAGAAGAGAATTGGCTGTGGGGGTCATGATCTTGGAGTGTACAACGTGAAAGATAATATTATGAAGCCAATGCCATGTTATTTGACATTTGATCGCTGGATTATAAATCCACCACCCTTTTGGATTGTTCCTGATATAATCCATGGTTTTGGTAATGGAAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000151 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009719 GO:0009725 GO:0009741 GO:0009742 GO:0009755 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010646 GO:0010647 GO:0014070 GO:0016567 GO:0016740 GO:0019005 GO:0019538 GO:0019787 GO:0019941 GO:0023051 GO:0023052 GO:0023056 GO:0030163 GO:0031461 GO:0031974 GO:0031981 GO:0032446 GO:0032870 GO:0032991 GO:0033993 GO:0036211 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043401 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048518 GO:0048522 GO:0048545 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051603 GO:0051716 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0070887 GO:0071310 GO:0071367 GO:0071383 GO:0071396 GO:0071407 GO:0071495 GO:0071704 GO:0140096 GO:1900457 GO:1900459 GO:1901564 GO:1901565 GO:1901575 GO:1901700 GO:1901701 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box

Protein Analysis

470

Amino Acids

53.28

Weight (kDa)

8.96

Isoelectric Point (pI)

47.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	132 - 431	1.8e-52	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000700)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27550
fragaria_vesca	FvH4_3g40651 FvH4_3g40751 FvH4_3g43771 FvH4_4g04480 FvH4_4g26310 FvH4_4g26320 FvH4_4g30091 FvH4_6g03860 FvH4_7g10560
malus_domestica	MD13G1117600.v1.1 MD13G1223500.v1.1 MD16G1228400.v1.1
prunus_persica	Prupe.1G050400_v2.0.a1 Prupe.1G050500_v2.0.a1 Prupe.1G227500_v2.0.a1 Prupe.1G227900_v2.0.a1 Prupe.1G228000_v2.0.a1 Prupe.1G228100_v2.0.a1 Prupe.6G285500_v2.0.a1
pyrus_communis	pycom13g10170 pycom16g10020
rosa_chinensis	RchiOBHm_Chr1g0339581 RchiOBHm_Chr3g0452431 RchiOBHm_Chr4g0395201 RchiOBHm_Chr4g0430571 RchiOBHm_Chr4g0433901
rosa_laevigata	RLG00000006969 RLG00000009529 RLG00000009536 RLG00000009538 RLG00000009542 RLG00000009640 RLG00000025603 RLG00000029238 RLG00000036257
rosa_multiflora	Rmu_co8444313.1_g000001 Rmu_sc0000352.1_g000004 Rmu_sc0002149.1_g000002 Rmu_sc0006211.1_g000002 Rmu_sc0011680.1_g000008 Rmu_sc0011680.1_g000009 Rmu_ssc0000387.1_g000032
rosa_roxburghii	Rroxscaffold_1G00007830 Rroxscaffold_1G00009290 Rroxscaffold_4G00313550 Rroxscaffold_5G00340130 Rroxscaffold_5G00375300 Rroxscaffold_6G00429450
rosa_rugosa	Rorug01G0140200.1 Rorug01G0140500.1 Rorug01G0179500 Rorug02G0640800 Rorug03G0359000.1 Rorug04G0244300 Rorug05G0415200
rosa_samantha	Rh1AG158200 Rh3AG042600 Rh3BG044200 Rh4CG062400 Rh4CG074400 Rh4CG324100 Rh4CG324200 Rh4CG350200 Rh5AG471400 Rh5BG491100
rosa_wichuraiana	Rw1G013110 Rw3G003280 Rw4G004620 Rw4G005740 Rw4G005750 Rw4G028350 Rw5G043800 Rw5G044960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1352
AccBSI	CCGCTC	1 cut(s)	91
AccII	CGCG	1 cut(s)	437
AccIII	TCCGGA	1 cut(s)	74
AciI	CCGC	6 cut(s)	86, 91, 121, 177, 391, 895
AclWI	GGATC	1 cut(s)	52
AcoI	YGGCCR	2 cut(s)	184, 748
AcsI	RAATTY	3 cut(s)	923, 963, 995
AfaI	GTAC	4 cut(s)	419, 760, 790, 1289
AfiI	CCNNNNNNNGG	3 cut(s)	110, 499, 536
AflIII	ACRYGT	1 cut(s)	435
AgsI	TTSAA	6 cut(s)	263, 400, 415, 551, 922, 1149
AhlI	ACTAGT	1 cut(s)	791
AjnI	CCWGG	4 cut(s)	108, 130, 358, 458
AleI	CACNNNNGTG	2 cut(s)	34, 481
AluBI	AGCT	6 cut(s)	235, 266, 290, 608, 1080, 1410
AluI	AGCT	6 cut(s)	235, 266, 290, 608, 1080, 1410
Alw21I	GWGCWC	1 cut(s)	156
Alw26I	GTCTC	1 cut(s)	720
AlwI	GGATC	1 cut(s)	52
Aor13HI	TCCGGA	1 cut(s)	74
AoxI	GGCC	6 cut(s)	48, 106, 128, 163, 184, 748
ApeKI	GCWGC	1 cut(s)	290
ApoI	RAATTY	3 cut(s)	923, 963, 995
Asp700I	GAANNNNTTC	1 cut(s)	1144
AspS9I	GGNCC	6 cut(s)	49, 106, 128, 163, 490, 1012
AsuC2I	CCSGG	3 cut(s)	105, 167, 1165
AsuHPI	GGTGA	5 cut(s)	21, 377, 604, 971, 985
AvaII	GGWCC	2 cut(s)	490, 1012
BbsI	GAAGAC	1 cut(s)	639
Bbv12I	GWGCWC	1 cut(s)	156
BbvI	GCAGC	1 cut(s)	277
BccI	CCATC	2 cut(s)	565, 637
BciT130I	CCWGG	4 cut(s)	110, 132, 360, 460
BclI	TGATCA	2 cut(s)	9, 222
BcnI	CCSGG	3 cut(s)	105, 167, 1165
BcoDI	GTCTC	1 cut(s)	720
BcuI	ACTAGT	1 cut(s)	791
BfaI	CTAG	3 cut(s)	215, 792, 1077
BfmI	CTRYAG	2 cut(s)	1036, 1060
BisI	GCNGC	2 cut(s)	291, 391
BlpI	GCTNAGC	1 cut(s)	150
BlsI	GCNGC	2 cut(s)	292, 392
BmcAI	AGTACT	2 cut(s)	419, 790
Bme1390I	CCNGG	7 cut(s)	105, 110, 132, 167, 360, 460, 1165
Bme18I	GGWCC	2 cut(s)	490, 1012
BmgT120I	GGNCC	6 cut(s)	49, 106, 128, 163, 490, 1012
BmrFI	CCNGG	7 cut(s)	105, 110, 132, 167, 360, 460, 1165
BmsI	GCATC	4 cut(s)	109, 445, 583, 721
BpiI	GAAGAC	1 cut(s)	639
BpmI	CTGGAG	1 cut(s)	558
Bpu10I	CCTNAGC	1 cut(s)	1081
Bpu1102I	GCTNAGC	1 cut(s)	150
BpuEI	CTTGAG	1 cut(s)	865
BpuMI	CCSGG	3 cut(s)	105, 167, 1165
BsaAI	YACGTR	1 cut(s)	693
BsaJI	CCNNGG	6 cut(s)	32, 109, 131, 344, 954, 1390
BsaWI	WCCGGW	1 cut(s)	74
Bsc4I	CCNNNNNNNGG	3 cut(s)	110, 499, 536
Bse118I	RCCGGY	1 cut(s)	173
Bse1I	ACTGG	3 cut(s)	578, 651, 745
BseAI	TCCGGA	1 cut(s)	74
BseBI	CCWGG	4 cut(s)	110, 132, 360, 460
BseDI	CCNNGG	6 cut(s)	32, 109, 131, 344, 954, 1390
BseGI	GGATG	5 cut(s)	12, 100, 249, 574, 638
BseLI	CCNNNNNNNGG	3 cut(s)	110, 499, 536
BseMII	CTCAG	2 cut(s)	141, 840
BseNI	ACTGG	3 cut(s)	578, 651, 745
BseRI	GAGGAG	4 cut(s)	34, 37, 515, 607
BseXI	GCAGC	1 cut(s)	277
Bsh1236I	CGCG	1 cut(s)	437
Bsh1285I	CGRYCG	1 cut(s)	66
BshFI	GGCC	6 cut(s)	50, 108, 130, 165, 186, 750
BsiEI	CGRYCG	1 cut(s)	66
BsiHKAI	GWGCWC	1 cut(s)	156
BsiSI	CCGG	6 cut(s)	75, 104, 166, 174, 187, 1165
BslFI	GGGAC	2 cut(s)	854, 1017
BslI	CCNNNNNNNGG	3 cut(s)	110, 499, 536
BsmAI	GTCTC	1 cut(s)	720
BsmBI	CGTCTC	1 cut(s)	720
BsmFI	GGGAC	2 cut(s)	854, 1017
BsnI	GGCC	6 cut(s)	50, 108, 130, 165, 186, 750
Bsp1286I	GDGCHC	1 cut(s)	156
Bsp13I	TCCGGA	1 cut(s)	74
Bsp1407I	TGTACA	1 cut(s)	1287
Bsp143I	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
Bsp1720I	GCTNAGC	1 cut(s)	150
Bsp19I	CCATGG	3 cut(s)	32, 344, 1390
BspACI	CCGC	6 cut(s)	86, 91, 121, 177, 391, 895
BspANI	GGCC	6 cut(s)	50, 108, 130, 165, 186, 750
BspCNI	CTCAG	2 cut(s)	142, 839
BspEI	TCCGGA	1 cut(s)	74
BspFNI	CGCG	1 cut(s)	437
BspHI	TCATGA	3 cut(s)	225, 769, 1273
BspPI	GGATC	1 cut(s)	52
BsrBI	CCGCTC	1 cut(s)	91
BsrFI	RCCGGY	1 cut(s)	173
BsrGI	TGTACA	1 cut(s)	1287
BsrI	ACTGG	3 cut(s)	578, 651, 745
BssAI	RCCGGY	1 cut(s)	173
BssECI	CCNNGG	6 cut(s)	32, 109, 131, 344, 954, 1390
BssMI	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
BssT1I	CCWWGG	4 cut(s)	32, 344, 954, 1390
Bst2UI	CCWGG	4 cut(s)	110, 132, 360, 460
Bst4CI	ACNGT	3 cut(s)	763, 776, 788
Bst6I	CTCTTC	2 cut(s)	1179, 1247
BstAUI	TGTACA	1 cut(s)	1287
BstBAI	YACGTR	1 cut(s)	693
BstC8I	GCNNGC	3 cut(s)	98, 123, 175
BstDEI	CTNAG	3 cut(s)	150, 826, 1081
BstDSI	CCRYGG	3 cut(s)	32, 344, 1390
BstENI	CCTNNNNNAGG	1 cut(s)	497
BstF5I	GGATG	5 cut(s)	12, 100, 249, 574, 638
BstFNI	CGCG	1 cut(s)	437
BstKTI	GATC	7 cut(s)	12, 29, 47, 225, 1210, 1279, 1342
BstMAI	GTCTC	1 cut(s)	720
BstMBI	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
BstMCI	CGRYCG	1 cut(s)	66
BstMWI	GCNNNNNNNGC	5 cut(s)	97, 122, 127, 136, 183
BstNI	CCWGG	4 cut(s)	110, 132, 360, 460
BstNSI	RCATGY	1 cut(s)	334
BstSCI	CCNGG	7 cut(s)	103, 108, 130, 165, 358, 458, 1163
BstSFI	CTRYAG	2 cut(s)	1036, 1060
BstUI	CGCG	1 cut(s)	437
BstV1I	GCAGC	1 cut(s)	277
BstV2I	GAAGAC	1 cut(s)	639
BstXI	CCANNNNNNTGG	4 cut(s)	564, 722, 1368, 1397
BsuRI	GGCC	6 cut(s)	50, 108, 130, 165, 186, 750
BtgI	CCRYGG	3 cut(s)	32, 344, 1390
BtsCI	GGATG	5 cut(s)	12, 100, 249, 574, 638
BtsI	GCAGTG	1 cut(s)	569
BtsIMutI	CAGTG	1 cut(s)	569
Cac8I	GCNNGC	3 cut(s)	98, 123, 175
CciI	TCATGA	3 cut(s)	225, 769, 1273
Cfr10I	RCCGGY	1 cut(s)	173
Cfr13I	GGNCC	6 cut(s)	49, 106, 128, 163, 490, 1012
Csp6I	GTAC	4 cut(s)	418, 759, 789, 1288
CviQI	GTAC	4 cut(s)	418, 759, 789, 1288
DdeI	CTNAG	3 cut(s)	150, 826, 1081
DpnI	GATC	7 cut(s)	11, 28, 46, 224, 1209, 1278, 1341
DpnII	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
EaeI	YGGCCR	2 cut(s)	184, 748
Eam1104I	CTCTTC	2 cut(s)	1179, 1247
EarI	CTCTTC	2 cut(s)	1179, 1247
EciI	GGCGGA	2 cut(s)	101, 192
Eco130I	CCWWGG	4 cut(s)	32, 344, 954, 1390
Eco47I	GGWCC	2 cut(s)	490, 1012
EcoNI	CCTNNNNNAGG	1 cut(s)	497
EcoO109I	RGGNCCY	1 cut(s)	1012
EcoRII	CCWGG	4 cut(s)	108, 130, 358, 458
EcoT14I	CCWWGG	4 cut(s)	32, 344, 954, 1390
EcoT22I	ATGCAT	1 cut(s)	736
ErhI	CCWWGG	4 cut(s)	32, 344, 954, 1390
Esp3I	CGTCTC	1 cut(s)	720
FaqI	GGGAC	2 cut(s)	854, 1017
FauI	CCCGC	1 cut(s)	114
FbaI	TGATCA	2 cut(s)	9, 222
Fnu4HI	GCNGC	2 cut(s)	291, 391
FokI	GGATG	5 cut(s)	19, 87, 236, 561, 625
Fsp4HI	GCNGC	2 cut(s)	291, 391
FspBI	CTAG	3 cut(s)	215, 792, 1077
GluI	GCNGC	2 cut(s)	291, 391
GsuI	CTGGAG	1 cut(s)	558
HaeIII	GGCC	6 cut(s)	50, 108, 130, 165, 186, 750
HapII	CCGG	6 cut(s)	75, 104, 166, 174, 187, 1165
HindIII	AAGCTT	1 cut(s)	233
HinfI	GANTC	3 cut(s)	283, 355, 950
HpaII	CCGG	6 cut(s)	75, 104, 166, 174, 187, 1165
HphI	GGTGA	5 cut(s)	21, 377, 604, 971, 985
Hpy166II	GTNNAC	3 cut(s)	247, 1074, 1288
Hpy188I	TCNGA	2 cut(s)	208, 936
Hpy188III	TCNNGA	8 cut(s)	75, 226, 452, 537, 770, 1175, 1274, 1379
Hpy8I	GTNNAC	3 cut(s)	247, 1074, 1288
Hpy99I	CGWCG	2 cut(s)	64, 637
HpyAV	CCTTC	5 cut(s)	35, 263, 748, 896, 1093
HpyCH4III	ACNGT	3 cut(s)	763, 776, 788
HpyCH4IV	ACGT	3 cut(s)	59, 692, 1293
HpyCH4V	TGCA	8 cut(s)	56, 293, 574, 671, 734, 809, 880, 1114
HpyF10VI	GCNNNNNNNGC	5 cut(s)	97, 122, 127, 136, 183
HpyF3I	CTNAG	3 cut(s)	150, 826, 1081
HpySE526I	ACGT	3 cut(s)	59, 692, 1293
Kpn2I	TCCGGA	1 cut(s)	74
KroI	GCCGGC	1 cut(s)	173
KroNI	GCCGGC	1 cut(s)	175
Ksp22I	TGATCA	2 cut(s)	9, 222
Kzo9I	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
LmnI	GCTCC	3 cut(s)	88, 93, 113
Lsp1109I	GCAGC	1 cut(s)	277
LweI	GCATC	4 cut(s)	109, 445, 583, 721
MaeI	CTAG	3 cut(s)	215, 792, 1077
MaeII	ACGT	3 cut(s)	59, 692, 1293
MaeIII	GTNAC	2 cut(s)	610, 988
MalI	GATC	7 cut(s)	11, 28, 46, 224, 1209, 1278, 1341
MbiI	CCGCTC	1 cut(s)	91
MboI	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
MboII	GAAGA	7 cut(s)	205, 208, 380, 388, 639, 1196, 1264
MhlI	GDGCHC	1 cut(s)	156
MluCI	AATT	7 cut(s)	899, 923, 937, 963, 995, 1194, 1257
MluI	ACGCGT	1 cut(s)	435
MlyI	GAGTC	1 cut(s)	959
MmeI	TCCRAC	2 cut(s)	186, 260
Mph1103I	ATGCAT	1 cut(s)	736
MreI	CGCCGGCG	1 cut(s)	173
MroI	TCCGGA	1 cut(s)	74
MroNI	GCCGGC	1 cut(s)	173
MroXI	GAANNNNTTC	1 cut(s)	1144
MseI	TTAA	2 cut(s)	525, 902
MslI	CAYNNNNRTG	4 cut(s)	34, 481, 562, 720
MspI	CCGG	6 cut(s)	75, 104, 166, 174, 187, 1165
MspR9I	CCNGG	7 cut(s)	105, 110, 132, 167, 360, 460, 1165
MvaI	CCWGG	4 cut(s)	110, 132, 360, 460
MvnI	CGCG	1 cut(s)	437
MwoI	GCNNNNNNNGC	5 cut(s)	97, 122, 127, 136, 183
NaeI	GCCGGC	1 cut(s)	175
NciI	CCSGG	3 cut(s)	105, 167, 1165
NcoI	CCATGG	3 cut(s)	32, 344, 1390
NdeII	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
NgoMIV	GCCGGC	1 cut(s)	173
NmeAIII	GCCGAG	1 cut(s)	120
NmuCI	GTSAC	2 cut(s)	610, 988
NsiI	ATGCAT	1 cut(s)	736
NspI	RCATGY	1 cut(s)	334
OliI	CACNNNNGTG	2 cut(s)	34, 481
PagI	TCATGA	3 cut(s)	225, 769, 1273
PcsI	WCGNNNNNNNCGW	1 cut(s)	641
PdiI	GCCGGC	1 cut(s)	175
PdmI	GAANNNNTTC	1 cut(s)	1144
PfeI	GAWTC	2 cut(s)	283, 355
PfoI	TCCNGGA	1 cut(s)	1163
PkrI	GCNGC	2 cut(s)	292, 392
PleI	GAGTC	1 cut(s)	958
PpsI	GAGTC	1 cut(s)	958
Ppu21I	YACGTR	1 cut(s)	693
PpuMI	RGGWCCY	1 cut(s)	1012
PsiI	TTATAA	1 cut(s)	1352
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	4 cut(s)	108, 130, 358, 458
PspGI	CCWGG	4 cut(s)	108, 130, 358, 458
PspPI	GGNCC	6 cut(s)	49, 106, 128, 163, 490, 1012
PspPPI	RGGWCCY	1 cut(s)	1012
PsrI	GAACNNNNNNTAC	2 cut(s)	1181, 1213
RsaI	GTAC	4 cut(s)	419, 760, 790, 1289
RsaNI	GTAC	4 cut(s)	418, 759, 789, 1288
RseI	CAYNNNNRTG	4 cut(s)	34, 481, 562, 720
SaqAI	TTAA	2 cut(s)	525, 902
SatI	GCNGC	2 cut(s)	291, 391
Sau3AI	GATC	7 cut(s)	9, 26, 44, 222, 1207, 1276, 1339
Sau96I	GGNCC	6 cut(s)	49, 106, 128, 163, 490, 1012
ScaI	AGTACT	2 cut(s)	419, 790
SchI	GAGTC	1 cut(s)	959
ScrFI	CCNGG	7 cut(s)	105, 110, 132, 167, 360, 460, 1165
SduI	GDGCHC	1 cut(s)	156
SfaNI	GCATC	4 cut(s)	109, 445, 583, 721
SfcI	CTRYAG	2 cut(s)	1036, 1060
SgrAI	CRCCGGYG	1 cut(s)	173
SinI	GGWCC	2 cut(s)	490, 1012
SmiMI	CAYNNNNRTG	4 cut(s)	34, 481, 562, 720
SmlI	CTYRAG	1 cut(s)	844
SmoI	CTYRAG	1 cut(s)	844
SpeI	ACTAGT	1 cut(s)	791
Sse9I	AATT	7 cut(s)	899, 923, 937, 963, 995, 1194, 1257
SsiI	CCGC	6 cut(s)	86, 91, 121, 177, 391, 895
SspI	AATATT	1 cut(s)	1306
SspMI	CTAG	3 cut(s)	215, 792, 1077
StyD4I	CCNGG	7 cut(s)	103, 108, 130, 165, 358, 458, 1163
StyI	CCWWGG	4 cut(s)	32, 344, 954, 1390
TaaI	ACNGT	3 cut(s)	763, 776, 788
TaiI	ACGT	3 cut(s)	62, 695, 1296
TaqI	TCGA	2 cut(s)	327, 1089
TaqII	GACCGA	1 cut(s)	52
TasI	AATT	7 cut(s)	899, 923, 937, 963, 995, 1194, 1257
TatI	WGTACW	3 cut(s)	417, 788, 1287
TauI	GCSGC	1 cut(s)	393
TfiI	GAWTC	2 cut(s)	283, 355
Tru1I	TTAA	2 cut(s)	525, 902
Tru9I	TTAA	2 cut(s)	525, 902
TscAI	CASTG	1 cut(s)	576
TseFI	GTSAC	2 cut(s)	610, 988
TseI	GCWGC	1 cut(s)	290
Tsp45I	GTSAC	2 cut(s)	610, 988
TspDTI	ATGAA	5 cut(s)	242, 462, 863, 1238, 1325
TspGWI	ACGGA	2 cut(s)	512, 519
TspRI	CASTG	1 cut(s)	576
VpaK11BI	GGWCC	2 cut(s)	490, 1012
XagI	CCTNNNNNAGG	1 cut(s)	497
XapI	RAATTY	3 cut(s)	923, 963, 995
XceI	RCATGY	1 cut(s)	334
XcmI	CCANNNNNNNNNTGG	2 cut(s)	791, 1365
XmnI	GAANNNNTTC	1 cut(s)	1144
XspI	CTAG	3 cut(s)	215, 792, 1077
ZrmI	AGTACT	2 cut(s)	419, 790
Zsp2I	ATGCAT	1 cut(s)	736

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.