f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 89 - 389 | 4.5e-52 | KIB1-4 beta-propeller |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1226 |
| AccII | CGCG | 1 cut(s) | 308 |
| AciI | CCGC | 1 cut(s) | 766 |
| AcoI | YGGCCR | 1 cut(s) | 619 |
| AcsI | RAATTY | 3 cut(s) | 794, 834, 866 |
| AfaI | GTAC | 4 cut(s) | 290, 631, 661, 1163 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 370, 407 |
| AflIII | ACRYGT | 1 cut(s) | 306 |
| AgsI | TTSAA | 7 cut(s) | 9, 134, 271, 286, 422, 761, 793 |
| AhlI | ACTAGT | 1 cut(s) | 662 |
| AjnI | CCWGG | 2 cut(s) | 229, 329 |
| AleI | CACNNNNGTG | 1 cut(s) | 352 |
| AluBI | AGCT | 6 cut(s) | 70, 106, 137, 161, 479, 1284 |
| AluI | AGCT | 6 cut(s) | 70, 106, 137, 161, 479, 1284 |
| Alw21I | GWGCWC | 1 cut(s) | 72 |
| Alw26I | GTCTC | 1 cut(s) | 591 |
| AoxI | GGCC | 1 cut(s) | 619 |
| ApeKI | GCWGC | 1 cut(s) | 161 |
| ApoI | RAATTY | 3 cut(s) | 794, 834, 866 |
| AspS9I | GGNCC | 2 cut(s) | 361, 883 |
| AsuC2I | CCSGG | 1 cut(s) | 1039 |
| AsuHPI | GGTGA | 4 cut(s) | 248, 475, 842, 856 |
| AvaII | GGWCC | 2 cut(s) | 361, 883 |
| BanII | GRGCYC | 1 cut(s) | 72 |
| BbsI | GAAGAC | 2 cut(s) | 52, 510 |
| Bbv12I | GWGCWC | 1 cut(s) | 72 |
| BbvI | GCAGC | 1 cut(s) | 148 |
| BccI | CCATC | 2 cut(s) | 436, 508 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 943, 977 |
| BciT130I | CCWGG | 2 cut(s) | 231, 331 |
| BclI | TGATCA | 2 cut(s) | 30, 93 |
| BcnI | CCSGG | 1 cut(s) | 1039 |
| BcoDI | GTCTC | 1 cut(s) | 591 |
| BcuI | ACTAGT | 1 cut(s) | 662 |
| BfaI | CTAG | 3 cut(s) | 86, 663, 951 |
| BfmI | CTRYAG | 2 cut(s) | 910, 934 |
| BisI | GCNGC | 1 cut(s) | 162 |
| BlsI | GCNGC | 1 cut(s) | 163 |
| BmcAI | AGTACT | 2 cut(s) | 290, 661 |
| Bme1390I | CCNGG | 3 cut(s) | 231, 331, 1039 |
| Bme18I | GGWCC | 2 cut(s) | 361, 883 |
| BmgT120I | GGNCC | 2 cut(s) | 361, 883 |
| BmrFI | CCNGG | 3 cut(s) | 231, 331, 1039 |
| BmsI | GCATC | 2 cut(s) | 316, 454 |
| BoxI | GACNNNNGTC | 1 cut(s) | 52 |
| BpiI | GAAGAC | 2 cut(s) | 52, 510 |
| BpmI | CTGGAG | 1 cut(s) | 429 |
| BpuEI | CTTGAG | 1 cut(s) | 736 |
| BpuMI | CCSGG | 1 cut(s) | 1039 |
| BsaJI | CCNNGG | 3 cut(s) | 50, 215, 825 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 370, 407 |
| Bse1I | ACTGG | 3 cut(s) | 449, 522, 616 |
| BseBI | CCWGG | 2 cut(s) | 231, 331 |
| BseDI | CCNNGG | 3 cut(s) | 50, 215, 825 |
| BseGI | GGATG | 3 cut(s) | 120, 445, 509 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 370, 407 |
| BseMII | CTCAG | 2 cut(s) | 57, 711 |
| BseNI | ACTGG | 3 cut(s) | 449, 522, 616 |
| BseRI | GAGGAG | 2 cut(s) | 386, 478 |
| BseXI | GCAGC | 1 cut(s) | 148 |
| Bsh1236I | CGCG | 1 cut(s) | 308 |
| BshFI | GGCC | 1 cut(s) | 621 |
| BsiHKAI | GWGCWC | 1 cut(s) | 72 |
| BsiSI | CCGG | 1 cut(s) | 1039 |
| BslFI | GGGAC | 2 cut(s) | 725, 891 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 370, 407 |
| BsmAI | GTCTC | 1 cut(s) | 591 |
| BsmBI | CGTCTC | 1 cut(s) | 591 |
| BsmFI | GGGAC | 2 cut(s) | 725, 891 |
| BsnI | GGCC | 1 cut(s) | 621 |
| Bsp1286I | GDGCHC | 1 cut(s) | 72 |
| Bsp1407I | TGTACA | 1 cut(s) | 1161 |
| Bsp143I | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| Bsp19I | CCATGG | 1 cut(s) | 215 |
| BspACI | CCGC | 1 cut(s) | 766 |
| BspANI | GGCC | 1 cut(s) | 621 |
| BspCNI | CTCAG | 2 cut(s) | 58, 710 |
| BspFNI | CGCG | 1 cut(s) | 308 |
| BspHI | TCATGA | 3 cut(s) | 96, 640, 1147 |
| BsrGI | TGTACA | 1 cut(s) | 1161 |
| BsrI | ACTGG | 3 cut(s) | 449, 522, 616 |
| BssECI | CCNNGG | 3 cut(s) | 50, 215, 825 |
| BssMI | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| BssT1I | CCWWGG | 3 cut(s) | 50, 215, 825 |
| Bst2UI | CCWGG | 2 cut(s) | 231, 331 |
| Bst4CI | ACNGT | 3 cut(s) | 634, 647, 659 |
| Bst6I | CTCTTC | 2 cut(s) | 1053, 1121 |
| BstAUI | TGTACA | 1 cut(s) | 1161 |
| BstC8I | GCNNGC | 1 cut(s) | 108 |
| BstDEI | CTNAG | 2 cut(s) | 66, 697 |
| BstDSI | CCRYGG | 1 cut(s) | 215 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 368 |
| BstF5I | GGATG | 3 cut(s) | 120, 445, 509 |
| BstFNI | CGCG | 1 cut(s) | 308 |
| BstKTI | GATC | 4 cut(s) | 33, 96, 1153, 1216 |
| BstMAI | GTCTC | 1 cut(s) | 591 |
| BstMBI | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| BstNI | CCWGG | 2 cut(s) | 231, 331 |
| BstNSI | RCATGY | 1 cut(s) | 205 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 52 |
| BstSCI | CCNGG | 3 cut(s) | 229, 329, 1037 |
| BstSFI | CTRYAG | 2 cut(s) | 910, 934 |
| BstUI | CGCG | 1 cut(s) | 308 |
| BstV1I | GCAGC | 1 cut(s) | 148 |
| BstV2I | GAAGAC | 2 cut(s) | 52, 510 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 435, 593, 1242, 1271 |
| BsuRI | GGCC | 1 cut(s) | 621 |
| BtgI | CCRYGG | 1 cut(s) | 215 |
| BtsCI | GGATG | 3 cut(s) | 120, 445, 509 |
| BtsI | GCAGTG | 1 cut(s) | 440 |
| BtsIMutI | CAGTG | 1 cut(s) | 440 |
| Cac8I | GCNNGC | 1 cut(s) | 108 |
| CciI | TCATGA | 3 cut(s) | 96, 640, 1147 |
| Cfr13I | GGNCC | 2 cut(s) | 361, 883 |
| CseI | GACGC | 1 cut(s) | 611 |
| Csp6I | GTAC | 4 cut(s) | 289, 630, 660, 1162 |
| CviQI | GTAC | 4 cut(s) | 289, 630, 660, 1162 |
| DdeI | CTNAG | 2 cut(s) | 66, 697 |
| DpnI | GATC | 4 cut(s) | 32, 95, 1152, 1215 |
| DpnII | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| EaeI | YGGCCR | 1 cut(s) | 619 |
| Eam1104I | CTCTTC | 2 cut(s) | 1053, 1121 |
| EarI | CTCTTC | 2 cut(s) | 1053, 1121 |
| Ecl136II | GAGCTC | 1 cut(s) | 70 |
| Eco130I | CCWWGG | 3 cut(s) | 50, 215, 825 |
| Eco24I | GRGCYC | 1 cut(s) | 72 |
| Eco47I | GGWCC | 2 cut(s) | 361, 883 |
| Eco53kI | GAGCTC | 1 cut(s) | 70 |
| EcoICRI | GAGCTC | 1 cut(s) | 70 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 368 |
| EcoO109I | RGGNCCY | 1 cut(s) | 883 |
| EcoRII | CCWGG | 2 cut(s) | 229, 329 |
| EcoT14I | CCWWGG | 3 cut(s) | 50, 215, 825 |
| EcoT38I | GRGCYC | 1 cut(s) | 72 |
| ErhI | CCWWGG | 3 cut(s) | 50, 215, 825 |
| Esp3I | CGTCTC | 1 cut(s) | 591 |
| FaqI | GGGAC | 2 cut(s) | 725, 891 |
| FbaI | TGATCA | 2 cut(s) | 30, 93 |
| Fnu4HI | GCNGC | 1 cut(s) | 162 |
| FokI | GGATG | 3 cut(s) | 107, 432, 496 |
| FriOI | GRGCYC | 1 cut(s) | 72 |
| Fsp4HI | GCNGC | 1 cut(s) | 162 |
| FspBI | CTAG | 3 cut(s) | 86, 663, 951 |
| GluI | GCNGC | 1 cut(s) | 162 |
| GsuI | CTGGAG | 1 cut(s) | 429 |
| HaeIII | GGCC | 1 cut(s) | 621 |
| HapII | CCGG | 1 cut(s) | 1039 |
| HgaI | GACGC | 1 cut(s) | 611 |
| HindIII | AAGCTT | 1 cut(s) | 104 |
| HinfI | GANTC | 3 cut(s) | 154, 226, 821 |
| HpaII | CCGG | 1 cut(s) | 1039 |
| HphI | GGTGA | 4 cut(s) | 248, 475, 842, 856 |
| Hpy166II | GTNNAC | 3 cut(s) | 118, 948, 1162 |
| Hpy188I | TCNGA | 3 cut(s) | 67, 750, 807 |
| Hpy188III | TCNNGA | 6 cut(s) | 97, 408, 641, 1049, 1148, 1253 |
| Hpy8I | GTNNAC | 3 cut(s) | 118, 948, 1162 |
| Hpy99I | CGWCG | 3 cut(s) | 264, 508, 605 |
| HpyAV | CCTTC | 2 cut(s) | 752, 967 |
| HpyCH4III | ACNGT | 3 cut(s) | 634, 647, 659 |
| HpyCH4IV | ACGT | 1 cut(s) | 1167 |
| HpyCH4V | TGCA | 5 cut(s) | 164, 445, 542, 680, 988 |
| HpyF3I | CTNAG | 2 cut(s) | 66, 697 |
| HpySE526I | ACGT | 1 cut(s) | 1167 |
| Ksp22I | TGATCA | 2 cut(s) | 30, 93 |
| Kzo9I | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| LmnI | GCTCC | 1 cut(s) | 75 |
| Lsp1109I | GCAGC | 1 cut(s) | 148 |
| LweI | GCATC | 2 cut(s) | 316, 454 |
| MaeI | CTAG | 3 cut(s) | 86, 663, 951 |
| MaeII | ACGT | 1 cut(s) | 1167 |
| MaeIII | GTNAC | 3 cut(s) | 345, 481, 859 |
| MalI | GATC | 4 cut(s) | 32, 95, 1152, 1215 |
| MboI | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| MboII | GAAGA | 7 cut(s) | 57, 251, 259, 510, 1026, 1070, 1138 |
| MhlI | GDGCHC | 1 cut(s) | 72 |
| MluCI | AATT | 7 cut(s) | 770, 794, 808, 834, 866, 1068, 1131 |
| MluI | ACGCGT | 1 cut(s) | 306 |
| MlyI | GAGTC | 1 cut(s) | 830 |
| MmeI | TCCRAC | 1 cut(s) | 131 |
| MnlI | CCTC | 9 cut(s) | 216, 284, 364, 496, 499, 523, 697, 840, 928 |
| MseI | TTAA | 2 cut(s) | 396, 773 |
| MslI | CAYNNNNRTG | 4 cut(s) | 38, 352, 433, 591 |
| MspI | CCGG | 1 cut(s) | 1039 |
| MspR9I | CCNGG | 3 cut(s) | 231, 331, 1039 |
| MvaI | CCWGG | 2 cut(s) | 231, 331 |
| MvnI | CGCG | 1 cut(s) | 308 |
| NciI | CCSGG | 1 cut(s) | 1039 |
| NcoI | CCATGG | 1 cut(s) | 215 |
| NdeII | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| NmuCI | GTSAC | 3 cut(s) | 345, 481, 859 |
| NspI | RCATGY | 1 cut(s) | 205 |
| OliI | CACNNNNGTG | 1 cut(s) | 352 |
| PagI | TCATGA | 3 cut(s) | 96, 640, 1147 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 512 |
| PfeI | GAWTC | 2 cut(s) | 154, 226 |
| PfoI | TCCNGGA | 1 cut(s) | 1037 |
| PkrI | GCNGC | 1 cut(s) | 163 |
| PleI | GAGTC | 1 cut(s) | 829 |
| PpsI | GAGTC | 1 cut(s) | 829 |
| PpuMI | RGGWCCY | 1 cut(s) | 883 |
| PshAI | GACNNNNGTC | 1 cut(s) | 52 |
| PsiI | TTATAA | 1 cut(s) | 1226 |
| Psp124BI | GAGCTC | 1 cut(s) | 72 |
| Psp5II | RGGWCCY | 1 cut(s) | 883 |
| Psp6I | CCWGG | 2 cut(s) | 229, 329 |
| PspGI | CCWGG | 2 cut(s) | 229, 329 |
| PspPI | GGNCC | 2 cut(s) | 361, 883 |
| PspPPI | RGGWCCY | 1 cut(s) | 883 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1055, 1087 |
| RsaI | GTAC | 4 cut(s) | 290, 631, 661, 1163 |
| RsaNI | GTAC | 4 cut(s) | 289, 630, 660, 1162 |
| RseI | CAYNNNNRTG | 4 cut(s) | 38, 352, 433, 591 |
| SacI | GAGCTC | 1 cut(s) | 72 |
| SaqAI | TTAA | 2 cut(s) | 396, 773 |
| SatI | GCNGC | 1 cut(s) | 162 |
| Sau3AI | GATC | 4 cut(s) | 30, 93, 1150, 1213 |
| Sau96I | GGNCC | 2 cut(s) | 361, 883 |
| ScaI | AGTACT | 2 cut(s) | 290, 661 |
| SchI | GAGTC | 1 cut(s) | 830 |
| ScrFI | CCNGG | 3 cut(s) | 231, 331, 1039 |
| SduI | GDGCHC | 1 cut(s) | 72 |
| SfaNI | GCATC | 2 cut(s) | 316, 454 |
| SfcI | CTRYAG | 2 cut(s) | 910, 934 |
| SinI | GGWCC | 2 cut(s) | 361, 883 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 38, 352, 433, 591 |
| SmlI | CTYRAG | 1 cut(s) | 715 |
| SmoI | CTYRAG | 1 cut(s) | 715 |
| SpeI | ACTAGT | 1 cut(s) | 662 |
| Sse9I | AATT | 7 cut(s) | 770, 794, 808, 834, 866, 1068, 1131 |
| SsiI | CCGC | 1 cut(s) | 766 |
| SspI | AATATT | 1 cut(s) | 1180 |
| SspMI | CTAG | 3 cut(s) | 86, 663, 951 |
| SstI | GAGCTC | 1 cut(s) | 72 |
| StyD4I | CCNGG | 3 cut(s) | 229, 329, 1037 |
| StyI | CCWWGG | 3 cut(s) | 50, 215, 825 |
| TaaI | ACNGT | 3 cut(s) | 634, 647, 659 |
| TaiI | ACGT | 1 cut(s) | 1170 |
| TaqI | TCGA | 3 cut(s) | 15, 198, 963 |
| TasI | AATT | 7 cut(s) | 770, 794, 808, 834, 866, 1068, 1131 |
| TatI | WGTACW | 3 cut(s) | 288, 659, 1161 |
| TfiI | GAWTC | 2 cut(s) | 154, 226 |
| Tru1I | TTAA | 2 cut(s) | 396, 773 |
| Tru9I | TTAA | 2 cut(s) | 396, 773 |
| TscAI | CASTG | 1 cut(s) | 447 |
| TseFI | GTSAC | 3 cut(s) | 345, 481, 859 |
| TseI | GCWGC | 1 cut(s) | 161 |
| Tsp45I | GTSAC | 3 cut(s) | 345, 481, 859 |
| TspDTI | ATGAA | 4 cut(s) | 113, 734, 1112, 1199 |
| TspGWI | ACGGA | 2 cut(s) | 383, 390 |
| TspRI | CASTG | 1 cut(s) | 447 |
| VpaK11BI | GGWCC | 2 cut(s) | 361, 883 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 368 |
| XapI | RAATTY | 3 cut(s) | 794, 834, 866 |
| XceI | RCATGY | 1 cut(s) | 205 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 57, 662, 1239 |
| XspI | CTAG | 3 cut(s) | 86, 663, 951 |
| ZrmI | AGTACT | 2 cut(s) | 290, 661 |