Rmu_sc0006211.1_g000002

Histone-lysine n-methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006211.1
Physical Location & Seq
Forward (+)
4786 .. 8434
3649 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006211.1_g000002.1.cds

Sequence Viewer

Length: 1452 bp
atggatctcgaccgcaccagaaagagaagatcgtcgccaccaatttggtctaagcttccacctgaactattagggttcatcacgacaaagcttggttcggtagacaccattcgctttaaagtcgtttgcccttcttggaatcgagcagccaaatcttacatctcttctccatgttacaaagtcatggagcaaactccgttgctcatgatccctagccaagaaaagaaggatccccatactcgccgcttcttcagccttgcagagaacaatactttcactctcaaaaacgtgtttcgagattttccggaggcttggtgtgtgggttcatcacacggatggctggtgcttatggatgggacaggaaaactggatctttttaatccgtttactgaagataggattgaactcccatcgctttggactcttcctcactttgccaaagttaaaactcaccccaacttctccgacgagtcgttcgcgcgcaataccaatttactgaagggctatatgatgggaaaagctgtcacttcttgtaacccgtcttgcaacaaggactttgctgttgtgataactcacaacttgcgaggaagacttgcattttgtaagcatgggaactacagatgtacatggacggacctaggagacgagtctgatcactatagtgatattatcttccacaatggccatttatatacattgacatccggcggttcagttggagtttgggacatgacgaaatcttttcccaccaaattttttgatcttcacccttttgcagaccagtcggagataaacaaagactttccctttgccaaatttgaagttcagcattatttggtggagtcgtcgggcgaccttttatttgtttggcgatttatagtgaagactattgaaggcgaaacgttcccatatagaaccttgcactttcctatctttaggctgagttccactagtaaagagtgggagaaagtggaatgtttgcatgaccgggctttgtttttgggtggcaatcattcaatgtcagtatcctcccgagtctttcctgaatgtcaagaaaactcgatttactttacagatgatatttcttatgagatgaatttaaagtacattgctaatgataaggaaggcggtcatgatagaggagtatacaatttaaaagataaggttgtcgagccattaccaggcctggcctctggcctcgccgacgtgctgtggtctgctgccggacgggatattgatgttactgcccagggtttccatgggagaaaggtttttccgctcgaggcttcagtatggtggtttggcgcaggtctcctgggtgtcgtcttgcgctacatcgacgtcagcttcgtagtggtgcggaccgggttgctcaggtcaaagtggcgtagttccatggcaacatggtggcccgagtcgtggaggctgaggcagcaagggatgtgggggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

483

Amino Acids

55.39

Weight (kDa)

8.44

Isoelectric Point (pI)

39.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1344
Acc36I ACCTGC 1 cut(s) 1298
AccBSI CCGCTC 1 cut(s) 1279
AccI GTMKAC 2 cut(s) 102, 1146
AccII CGCG 2 cut(s) 479, 481
AccIII TCCGGA 1 cut(s) 304
AciI CCGC 6 cut(s) 13, 244, 708, 1128, 1277, 1360
AclI AACGTT 1 cut(s) 902
AclWI GGATC 5 cut(s) 12, 202, 224, 237, 378
AcoI YGGCCR 1 cut(s) 682
AcsI RAATTY 3 cut(s) 752, 815, 1096
AcuI CTGAAG 4 cut(s) 235, 411, 518, 1272
AcyI GRCGYC 1 cut(s) 1341
AfaI GTAC 2 cut(s) 625, 1106
AfiI CCNNNNNNNGG 2 cut(s) 1181, 1419
AflIII ACRYGT 1 cut(s) 288
AgsI TTSAA 4 cut(s) 404, 821, 893, 1017
AhlI ACTAGT 1 cut(s) 950
AjiI CACGTC 1 cut(s) 1207
AjnI CCWGG 4 cut(s) 1180, 1185, 1248, 1314
AleI CACNNNNGTG 1 cut(s) 660
AluBI AGCT 4 cut(s) 55, 91, 521, 1347
AluI AGCT 4 cut(s) 55, 91, 521, 1347
Alw26I GTCTC 2 cut(s) 636, 1316
AlwI GGATC 5 cut(s) 12, 202, 224, 237, 378
Ama87I CYCGRG 3 cut(s) 1032, 1280, 1412
Aor13HI TCCGGA 1 cut(s) 304
AoxI GGCC 5 cut(s) 682, 1183, 1188, 1195, 1409
ApeKI GCWGC 3 cut(s) 146, 1220, 1432
ApoI RAATTY 3 cut(s) 752, 815, 1096
AspA2I CCTAGG 1 cut(s) 637
AspLEI GCGC 4 cut(s) 481, 483, 1307, 1332
AspS9I GGNCC 3 cut(s) 634, 1362, 1410
AsuC2I CCSGG 2 cut(s) 989, 1366
AsuHPI GGTGA 2 cut(s) 443, 758
AvaI CYCGRG 3 cut(s) 1032, 1280, 1412
AvaII GGWCC 2 cut(s) 634, 1362
AvrII CCTAGG 1 cut(s) 637
BalI TGGCCA 1 cut(s) 684
BamHI GGATCC 1 cut(s) 229
BbsI GAAGAC 2 cut(s) 595, 890
BbvCI CCTCAGC 1 cut(s) 1427
BbvI GCAGC 3 cut(s) 158, 1207, 1444
BccI CCATC 4 cut(s) 330, 347, 418, 505
BcgI CGANNNNNNTGC 2 cut(s) 765, 799
BciT130I CCWGG 4 cut(s) 1182, 1187, 1250, 1316
BciVI GTATCC 1 cut(s) 1036
BclI TGATCA 1 cut(s) 652
BcnI CCSGG 2 cut(s) 989, 1366
BcoDI GTCTC 2 cut(s) 636, 1316
BcuI ACTAGT 1 cut(s) 950
BfaI CTAG 3 cut(s) 213, 638, 951
BfmI CTRYAG 2 cut(s) 616, 658
BfuAI ACCTGC 1 cut(s) 1298
BfuI GTATCC 1 cut(s) 1036
BisI GCNGC 4 cut(s) 147, 244, 1221, 1433
BlnI CCTAGG 1 cut(s) 637
BlsI GCNGC 4 cut(s) 148, 245, 1222, 1434
Bme1390I CCNGG 6 cut(s) 989, 1182, 1187, 1250, 1316, 1366
Bme18I GGWCC 2 cut(s) 634, 1362
BmeT110I CYCGRG 3 cut(s) 1032, 1280, 1412
BmgBI CACGTC 1 cut(s) 1207
BmgT120I GGNCC 3 cut(s) 634, 1362, 1410
BmiI GGNNCC 1 cut(s) 231
BmrFI CCNGG 6 cut(s) 989, 1182, 1187, 1250, 1316, 1366
BpiI GAAGAC 2 cut(s) 595, 890
Bpu10I CCTNAGC 2 cut(s) 1373, 1427
BpuMI CCSGG 2 cut(s) 989, 1366
BsaHI GRCGYC 1 cut(s) 1341
BsaI GGTCTC 1 cut(s) 1316
BsaJI CCNNGG 6 cut(s) 637, 1248, 1249, 1258, 1315, 1395
BsaWI WCCGGW 1 cut(s) 304
BsaXI ACNNNNNCTCC 2 cut(s) 299, 329
Bsc4I CCNNNNNNNGG 2 cut(s) 1181, 1419
Bse1I ACTGG 2 cut(s) 372, 781
Bse3DI GCAATG 1 cut(s) 1107
BseAI TCCGGA 1 cut(s) 304
BseBI CCWGG 4 cut(s) 1182, 1187, 1250, 1316
BseDI CCNNGG 6 cut(s) 637, 1248, 1249, 1258, 1315, 1395
BseGI GGATG 4 cut(s) 341, 358, 701, 1446
BseLI CCNNNNNNNGG 2 cut(s) 1181, 1419
BseMI GCAATG 1 cut(s) 1107
BseMII CTCAG 3 cut(s) 932, 1387, 1418
BseNI ACTGG 2 cut(s) 372, 781
BsePI GCGCGC 1 cut(s) 479
BseRI GAGGAG 1 cut(s) 1155
BseXI GCAGC 3 cut(s) 158, 1207, 1444
Bsh1236I CGCG 2 cut(s) 479, 481
Bsh1285I CGRYCG 1 cut(s) 13
BshFI GGCC 5 cut(s) 684, 1185, 1190, 1197, 1411
BsiEI CGRYCG 1 cut(s) 13
BsiHKCI CYCGRG 3 cut(s) 1032, 1280, 1412
BsiSI CCGG 5 cut(s) 305, 705, 988, 1224, 1365
BslFI GGGAC 2 cut(s) 370, 740
BslI CCNNNNNNNGG 2 cut(s) 1181, 1419
BsmAI GTCTC 2 cut(s) 636, 1316
BsmBI CGTCTC 1 cut(s) 636
BsmFI GGGAC 2 cut(s) 370, 740
BsnI GGCC 5 cut(s) 684, 1185, 1190, 1197, 1411
Bso31I GGTCTC 1 cut(s) 1316
BsoBI CYCGRG 3 cut(s) 1032, 1280, 1412
Bsp13I TCCGGA 1 cut(s) 304
Bsp1407I TGTACA 1 cut(s) 623
Bsp143I GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
Bsp19I CCATGG 2 cut(s) 1258, 1395
BspACI CCGC 6 cut(s) 13, 244, 708, 1128, 1277, 1360
BspANI GGCC 5 cut(s) 684, 1185, 1190, 1197, 1411
BspCNI CTCAG 3 cut(s) 933, 1386, 1419
BspEI TCCGGA 1 cut(s) 304
BspFNI CGCG 2 cut(s) 479, 481
BspHI TCATGA 2 cut(s) 204, 1132
BspLI GGNNCC 1 cut(s) 231
BspMI ACCTGC 1 cut(s) 1298
BspPI GGATC 5 cut(s) 12, 202, 224, 237, 378
BspTNI GGTCTC 1 cut(s) 1316
BsrBI CCGCTC 1 cut(s) 1279
BsrDI GCAATG 1 cut(s) 1107
BsrGI TGTACA 1 cut(s) 623
BsrI ACTGG 2 cut(s) 372, 781
BssECI CCNNGG 6 cut(s) 637, 1248, 1249, 1258, 1315, 1395
BssHII GCGCGC 1 cut(s) 479
BssMI GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
BssNAI GTATAC 1 cut(s) 1147
BssNI GRCGYC 1 cut(s) 1341
BssT1I CCWWGG 3 cut(s) 637, 1258, 1395
Bst1107I GTATAC 1 cut(s) 1147
Bst2UI CCWGG 4 cut(s) 1182, 1187, 1250, 1316
Bst6I CTCTTC 2 cut(s) 169, 429
BstACI GRCGYC 1 cut(s) 1341
BstAUI TGTACA 1 cut(s) 623
BstC8I GCNNGC 1 cut(s) 481
BstDEI CTNAG 4 cut(s) 51, 941, 1373, 1427
BstDSI CCRYGG 2 cut(s) 1258, 1395
BstF5I GGATG 4 cut(s) 341, 358, 701, 1446
BstFNI CGCG 2 cut(s) 479, 481
BstHHI GCGC 4 cut(s) 481, 483, 1307, 1332
BstKTI GATC 7 cut(s) 7, 32, 210, 232, 373, 655, 763
BstMAI GTCTC 2 cut(s) 636, 1316
BstMBI GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
BstMCI CGRYCG 1 cut(s) 13
BstMWI GCNNNNNNNGC 2 cut(s) 252, 1432
BstNI CCWGG 4 cut(s) 1182, 1187, 1250, 1316
BstSCI CCNGG 6 cut(s) 987, 1180, 1185, 1248, 1314, 1364
BstSFI CTRYAG 2 cut(s) 616, 658
BstUI CGCG 2 cut(s) 479, 481
BstV1I GCAGC 3 cut(s) 158, 1207, 1444
BstV2I GAAGAC 2 cut(s) 595, 890
BstX2I RGATCY 3 cut(s) 4, 229, 370
BstXI CCANNNNNNTGG 2 cut(s) 45, 417
BstYI RGATCY 3 cut(s) 4, 229, 370
BstZ17I GTATAC 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 1036
BsuRI GGCC 5 cut(s) 684, 1185, 1190, 1197, 1411
BtgI CCRYGG 2 cut(s) 1258, 1395
BtgZI GCGATG 1 cut(s) 396
BtrI CACGTC 1 cut(s) 1207
BtsCI GGATG 4 cut(s) 341, 358, 701, 1446
BveI ACCTGC 1 cut(s) 1298
Cac8I GCNNGC 1 cut(s) 481
CciI TCATGA 2 cut(s) 204, 1132
CfoI GCGC 4 cut(s) 481, 483, 1307, 1332
Cfr13I GGNCC 3 cut(s) 634, 1362, 1410
CpoI CGGWCCG 1 cut(s) 1362
Csp6I GTAC 2 cut(s) 624, 1105
CspCI CAANNNNNGTGG 1 cut(s) 1424
CspI CGGWCCG 1 cut(s) 1362
CviQI GTAC 2 cut(s) 624, 1105
DdeI CTNAG 4 cut(s) 51, 941, 1373, 1427
DpnI GATC 7 cut(s) 6, 31, 209, 231, 372, 654, 762
DpnII GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
DraI TTTAAA 3 cut(s) 118, 1101, 1155
EaeI YGGCCR 1 cut(s) 682
Eam1104I CTCTTC 2 cut(s) 169, 429
EarI CTCTTC 2 cut(s) 169, 429
Eco130I CCWWGG 3 cut(s) 637, 1258, 1395
Eco147I AGGCCT 1 cut(s) 1185
Eco31I GGTCTC 1 cut(s) 1316
Eco47I GGWCC 2 cut(s) 634, 1362
Eco57I CTGAAG 4 cut(s) 235, 411, 518, 1272
Eco88I CYCGRG 3 cut(s) 1032, 1280, 1412
EcoRII CCWGG 4 cut(s) 1180, 1185, 1248, 1314
EcoT14I CCWWGG 3 cut(s) 637, 1258, 1395
ErhI CCWWGG 3 cut(s) 637, 1258, 1395
Esp3I CGTCTC 1 cut(s) 636
FaqI GGGAC 2 cut(s) 370, 740
FbaI TGATCA 1 cut(s) 652
FblI GTMKAC 2 cut(s) 102, 1146
Fnu4HI GCNGC 4 cut(s) 147, 244, 1221, 1433
FokI GGATG 3 cut(s) 348, 365, 688
Fsp4HI GCNGC 4 cut(s) 147, 244, 1221, 1433
FspBI CTAG 3 cut(s) 213, 638, 951
GlaI GCGC 4 cut(s) 480, 482, 1306, 1331
GluI GCNGC 4 cut(s) 147, 244, 1221, 1433
HaeIII GGCC 5 cut(s) 684, 1185, 1190, 1197, 1411
HapII CCGG 5 cut(s) 305, 705, 988, 1224, 1365
HhaI GCGC 4 cut(s) 481, 483, 1307, 1332
Hin1I GRCGYC 1 cut(s) 1341
Hin6I GCGC 4 cut(s) 479, 481, 1305, 1330
HinP1I GCGC 4 cut(s) 479, 481, 1305, 1330
HindIII AAGCTT 2 cut(s) 53, 89
HinfI GANTC 7 cut(s) 139, 421, 470, 647, 842, 1035, 1415
HpaII CCGG 5 cut(s) 305, 705, 988, 1224, 1365
HphI GGTGA 2 cut(s) 443, 758
Hpy166II GTNNAC 3 cut(s) 103, 387, 1147
Hpy188I TCNGA 3 cut(s) 466, 652, 787
Hpy188III TCNNGA 9 cut(s) 8, 82, 205, 296, 305, 1032, 1043, 1052, 1133
Hpy8I GTNNAC 3 cut(s) 103, 387, 1147
Hpy99I CGWCG 5 cut(s) 37, 470, 850, 1208, 1343
HpyAV CCTTC 5 cut(s) 141, 220, 493, 887, 1118
HpyCH4IV ACGT 4 cut(s) 288, 902, 1206, 1341
HpyCH4V TGCA 6 cut(s) 260, 546, 596, 776, 922, 982
HpyF10VI GCNNNNNNNGC 2 cut(s) 252, 1432
HpyF3I CTNAG 4 cut(s) 51, 941, 1373, 1427
HpySE526I ACGT 4 cut(s) 288, 902, 1206, 1341
Hsp92I GRCGYC 1 cut(s) 1341
HspAI GCGC 4 cut(s) 479, 481, 1305, 1330
Kpn2I TCCGGA 1 cut(s) 304
Ksp22I TGATCA 1 cut(s) 652
Kzo9I GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
LmnI GCTCC 1 cut(s) 187
Lsp1109I GCAGC 3 cut(s) 158, 1207, 1444
MaeI CTAG 3 cut(s) 213, 638, 951
MaeII ACGT 4 cut(s) 288, 902, 1206, 1341
MaeIII GTNAC 4 cut(s) 173, 523, 533, 1240
MalI GATC 7 cut(s) 6, 31, 209, 231, 372, 654, 762
MbiI CCGCTC 1 cut(s) 1279
MboI GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
MboII GAAGA 9 cut(s) 39, 156, 241, 404, 416, 600, 664, 755, 895
MflI RGATCY 3 cut(s) 4, 229, 370
MlsI TGGCCA 1 cut(s) 684
MluCI AATT 6 cut(s) 42, 490, 752, 815, 1096, 1150
MluNI TGGCCA 1 cut(s) 684
MlyI GAGTC 6 cut(s) 415, 479, 656, 851, 1044, 1424
MmeI TCCRAC 3 cut(s) 489, 697, 765
Mox20I TGGCCA 1 cut(s) 684
MroI TCCGGA 1 cut(s) 304
MscI TGGCCA 1 cut(s) 684
MseI TTAA 5 cut(s) 117, 378, 444, 1100, 1154
MslI CAYNNNNRTG 2 cut(s) 334, 660
Msp20I TGGCCA 1 cut(s) 684
MspI CCGG 5 cut(s) 305, 705, 988, 1224, 1365
MspR9I CCNGG 6 cut(s) 989, 1182, 1187, 1250, 1316, 1366
MvaI CCWGG 4 cut(s) 1182, 1187, 1250, 1316
MvnI CGCG 2 cut(s) 479, 481
MwoI GCNNNNNNNGC 2 cut(s) 252, 1432
NciI CCSGG 2 cut(s) 989, 1366
NcoI CCATGG 2 cut(s) 1258, 1395
NdeII GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
NlaIV GGNNCC 1 cut(s) 231
NmuCI GTSAC 1 cut(s) 523
OliI CACNNNNGTG 1 cut(s) 660
PaeR7I CTCGAG 1 cut(s) 1280
PagI TCATGA 2 cut(s) 204, 1132
PasI CCCWGGG 1 cut(s) 1249
PauI GCGCGC 1 cut(s) 479
PceI AGGCCT 1 cut(s) 1185
PcsI WCGNNNNNNNCGW 1 cut(s) 1347
PfeI GAWTC 1 cut(s) 139
PkrI GCNGC 4 cut(s) 148, 245, 1222, 1434
PleI GAGTC 6 cut(s) 415, 478, 655, 850, 1043, 1423
PpsI GAGTC 6 cut(s) 415, 478, 655, 850, 1043, 1423
Psp1406I AACGTT 1 cut(s) 902
Psp6I CCWGG 4 cut(s) 1180, 1185, 1248, 1314
PspGI CCWGG 4 cut(s) 1180, 1185, 1248, 1314
PspN4I GGNNCC 1 cut(s) 231
PspPI GGNCC 3 cut(s) 634, 1362, 1410
PspXI VCTCGAGB 1 cut(s) 1280
PsuI RGATCY 3 cut(s) 4, 229, 370
PteI GCGCGC 1 cut(s) 479
RsaI GTAC 2 cut(s) 625, 1106
RsaNI GTAC 2 cut(s) 624, 1105
RseI CAYNNNNRTG 2 cut(s) 334, 660
Rsr2I CGGWCCG 1 cut(s) 1362
RsrII CGGWCCG 1 cut(s) 1362
SaqAI TTAA 5 cut(s) 117, 378, 444, 1100, 1154
SatI GCNGC 4 cut(s) 147, 244, 1221, 1433
Sau3AI GATC 7 cut(s) 4, 29, 207, 229, 370, 652, 760
Sau96I GGNCC 3 cut(s) 634, 1362, 1410
SchI GAGTC 6 cut(s) 415, 479, 656, 851, 1044, 1424
ScrFI CCNGG 6 cut(s) 989, 1182, 1187, 1250, 1316, 1366
SfcI CTRYAG 2 cut(s) 616, 658
Sfr274I CTCGAG 1 cut(s) 1280
SinI GGWCC 2 cut(s) 634, 1362
SlaI CTCGAG 1 cut(s) 1280
SmiMI CAYNNNNRTG 2 cut(s) 334, 660
SmlI CTYRAG 1 cut(s) 1280
SmoI CTYRAG 1 cut(s) 1280
SpeI ACTAGT 1 cut(s) 950
Sse9I AATT 6 cut(s) 42, 490, 752, 815, 1096, 1150
SseBI AGGCCT 1 cut(s) 1185
SsiI CCGC 6 cut(s) 13, 244, 708, 1128, 1277, 1360
SspMI CTAG 3 cut(s) 213, 638, 951
StuI AGGCCT 1 cut(s) 1185
StyD4I CCNGG 6 cut(s) 987, 1180, 1185, 1248, 1314, 1364
StyI CCWWGG 3 cut(s) 637, 1258, 1395
TaiI ACGT 4 cut(s) 291, 905, 1209, 1344
TaqI TCGA 7 cut(s) 9, 142, 295, 1061, 1170, 1281, 1338
TasI AATT 6 cut(s) 42, 490, 752, 815, 1096, 1150
TatI WGTACW 2 cut(s) 623, 1104
TauI GCSGC 1 cut(s) 246
TfiI GAWTC 1 cut(s) 139
Tru1I TTAA 5 cut(s) 117, 378, 444, 1100, 1154
Tru9I TTAA 5 cut(s) 117, 378, 444, 1100, 1154
TseFI GTSAC 1 cut(s) 523
TseI GCWGC 3 cut(s) 146, 1220, 1432
Tsp45I GTSAC 1 cut(s) 523
TspDTI ATGAA 3 cut(s) 67, 315, 1109
TspGWI ACGGA 4 cut(s) 186, 348, 372, 647
VpaK11BI GGWCC 2 cut(s) 634, 1362
XapI RAATTY 3 cut(s) 752, 815, 1096
XcmI CCANNNNNNNNNTGG 1 cut(s) 1256
XhoI CTCGAG 1 cut(s) 1280
XmaJI CCTAGG 1 cut(s) 637
XmiI GTMKAC 2 cut(s) 102, 1146
XspI CTAG 3 cut(s) 213, 638, 951
ZraI GACGTC 1 cut(s) 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.