Male sterility protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| NmrA | PF05368 | 7 - 129 | 2.3e-09 | NmrA-like family |
| Epimerase | PF01370 | 8 - 250 | 7e-23 | NAD dependent epimerase/dehydratase family |
| 3Beta_HSD | PF01073 | 10 - 192 | 3.2e-17 | 3-beta hydroxysteroid dehydrogenase/isomerase family |
| GDP_Man_Dehyd | PF16363 | 10 - 267 | 1.7e-13 | GDP-mannose 4,6 dehydratase |
| NAD_binding_4 | PF07993 | 10 - 197 | 3.8e-11 | Male sterility protein |
| NAD_binding_10 | PF13460 | 12 - 133 | 4.4e-08 | NAD(P)H-binding |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 810, 927 |
| AclWI | GGATC | 3 cut(s) | 105, 564, 766 |
| AcoI | YGGCCR | 1 cut(s) | 393 |
| AcsI | RAATTY | 1 cut(s) | 333 |
| AcuI | CTGAAG | 2 cut(s) | 62, 144 |
| AfaI | GTAC | 3 cut(s) | 585, 626, 758 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 125, 647 |
| AgeI | ACCGGT | 1 cut(s) | 242 |
| AgsI | TTSAA | 9 cut(s) | 220, 278, 340, 409, 425, 734, 916, 922, 959 |
| AjnI | CCWGG | 3 cut(s) | 160, 315, 528 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 768, 800 |
| AluBI | AGCT | 4 cut(s) | 144, 478, 486, 793 |
| AluI | AGCT | 4 cut(s) | 144, 478, 486, 793 |
| Alw21I | GWGCWC | 3 cut(s) | 169, 488, 696 |
| Alw26I | GTCTC | 2 cut(s) | 64, 206 |
| Alw44I | GTGCAC | 1 cut(s) | 692 |
| AlwI | GGATC | 3 cut(s) | 105, 564, 766 |
| Ama87I | CYCGRG | 1 cut(s) | 290 |
| AoxI | GGCC | 1 cut(s) | 393 |
| ApaLI | GTGCAC | 1 cut(s) | 692 |
| ApeKI | GCWGC | 2 cut(s) | 237, 707 |
| ApoI | RAATTY | 1 cut(s) | 333 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 582, 614 |
| AsiGI | ACCGGT | 1 cut(s) | 242 |
| AspLEI | GCGC | 1 cut(s) | 953 |
| AspS9I | GGNCC | 1 cut(s) | 590 |
| AsuHPI | GGTGA | 2 cut(s) | 254, 662 |
| AvaI | CYCGRG | 1 cut(s) | 290 |
| AvaII | GGWCC | 1 cut(s) | 590 |
| BaeGI | GKGCMC | 2 cut(s) | 696, 718 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 867, 900 |
| BalI | TGGCCA | 1 cut(s) | 395 |
| BanII | GRGCYC | 2 cut(s) | 316, 488 |
| BbsI | GAAGAC | 1 cut(s) | 241 |
| Bbv12I | GWGCWC | 3 cut(s) | 169, 488, 696 |
| BbvI | GCAGC | 2 cut(s) | 224, 719 |
| BccI | CCATC | 2 cut(s) | 236, 941 |
| BciT130I | CCWGG | 3 cut(s) | 162, 317, 530 |
| BcoDI | GTCTC | 2 cut(s) | 64, 206 |
| BfaI | CTAG | 2 cut(s) | 350, 387 |
| BfmI | CTRYAG | 2 cut(s) | 579, 983 |
| BfoI | RGCGCY | 1 cut(s) | 954 |
| BglII | AGATCT | 1 cut(s) | 196 |
| BisI | GCNGC | 3 cut(s) | 238, 708, 928 |
| BlsI | GCNGC | 3 cut(s) | 239, 709, 929 |
| BmcAI | AGTACT | 1 cut(s) | 585 |
| Bme1390I | CCNGG | 3 cut(s) | 162, 317, 530 |
| Bme18I | GGWCC | 1 cut(s) | 590 |
| BmeT110I | CYCGRG | 1 cut(s) | 290 |
| BmgT120I | GGNCC | 1 cut(s) | 590 |
| BmiI | GGNNCC | 1 cut(s) | 639 |
| BmrFI | CCNGG | 3 cut(s) | 162, 317, 530 |
| BmsI | GCATC | 2 cut(s) | 448, 694 |
| BpiI | GAAGAC | 1 cut(s) | 241 |
| BpmI | CTGGAG | 1 cut(s) | 551 |
| BsaI | GGTCTC | 1 cut(s) | 206 |
| BsaJI | CCNNGG | 5 cut(s) | 232, 267, 291, 315, 528 |
| BsaWI | WCCGGW | 1 cut(s) | 242 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 125, 647 |
| Bse118I | RCCGGY | 1 cut(s) | 242 |
| Bse1I | ACTGG | 2 cut(s) | 37, 639 |
| Bse3DI | GCAATG | 1 cut(s) | 668 |
| BseBI | CCWGG | 3 cut(s) | 162, 317, 530 |
| BseDI | CCNNGG | 5 cut(s) | 232, 267, 291, 315, 528 |
| BseGI | GGATG | 1 cut(s) | 228 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 125, 647 |
| BseMI | GCAATG | 1 cut(s) | 668 |
| BseMII | CTCAG | 2 cut(s) | 59, 201 |
| BseNI | ACTGG | 2 cut(s) | 37, 639 |
| BseSI | GKGCMC | 2 cut(s) | 696, 718 |
| BseXI | GCAGC | 2 cut(s) | 224, 719 |
| BseYI | CCCAGC | 1 cut(s) | 328 |
| BsgI | GTGCAG | 1 cut(s) | 223 |
| BshFI | GGCC | 1 cut(s) | 395 |
| BshTI | ACCGGT | 1 cut(s) | 242 |
| BsiHKAI | GWGCWC | 3 cut(s) | 169, 488, 696 |
| BsiHKCI | CYCGRG | 1 cut(s) | 290 |
| BsiSI | CCGG | 1 cut(s) | 243 |
| BslFI | GGGAC | 1 cut(s) | 645 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 125, 647 |
| BsmAI | GTCTC | 2 cut(s) | 64, 206 |
| BsmFI | GGGAC | 1 cut(s) | 645 |
| BsmI | GAATGC | 1 cut(s) | 910 |
| BsnI | GGCC | 1 cut(s) | 395 |
| Bso31I | GGTCTC | 1 cut(s) | 206 |
| BsoBI | CYCGRG | 1 cut(s) | 290 |
| Bsp1286I | GDGCHC | 5 cut(s) | 169, 316, 488, 696, 718 |
| Bsp1407I | TGTACA | 1 cut(s) | 624 |
| Bsp143I | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| Bsp19I | CCATGG | 1 cut(s) | 267 |
| BspACI | CCGC | 2 cut(s) | 810, 927 |
| BspANI | GGCC | 1 cut(s) | 395 |
| BspCNI | CTCAG | 2 cut(s) | 60, 202 |
| BspLI | GGNNCC | 1 cut(s) | 639 |
| BspPI | GGATC | 3 cut(s) | 105, 564, 766 |
| BspQI | GCTCTTC | 1 cut(s) | 493 |
| BspTNI | GGTCTC | 1 cut(s) | 206 |
| BsrDI | GCAATG | 1 cut(s) | 668 |
| BsrFI | RCCGGY | 1 cut(s) | 242 |
| BsrGI | TGTACA | 1 cut(s) | 624 |
| BsrI | ACTGG | 2 cut(s) | 37, 639 |
| BssAI | RCCGGY | 1 cut(s) | 242 |
| BssECI | CCNNGG | 5 cut(s) | 232, 267, 291, 315, 528 |
| BssMI | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| BssT1I | CCWWGG | 2 cut(s) | 232, 267 |
| Bst2UI | CCWGG | 3 cut(s) | 162, 317, 530 |
| Bst4CI | ACNGT | 7 cut(s) | 22, 106, 364, 511, 568, 883, 900 |
| Bst6I | CTCTTC | 1 cut(s) | 493 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 713 |
| BstAUI | TGTACA | 1 cut(s) | 624 |
| BstC8I | GCNNGC | 3 cut(s) | 99, 346, 910 |
| BstDEI | CTNAG | 2 cut(s) | 68, 210 |
| BstDSI | CCRYGG | 1 cut(s) | 267 |
| BstEII | GGTNACC | 1 cut(s) | 650 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 123 |
| BstF5I | GGATG | 1 cut(s) | 228 |
| BstH2I | RGCGCY | 1 cut(s) | 954 |
| BstHHI | GCGC | 1 cut(s) | 953 |
| BstKTI | GATC | 5 cut(s) | 113, 199, 559, 774, 847 |
| BstMAI | GTCTC | 2 cut(s) | 64, 206 |
| BstMBI | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 713 |
| BstNI | CCWGG | 3 cut(s) | 162, 317, 530 |
| BstNSI | RCATGY | 2 cut(s) | 348, 740 |
| BstPI | GGTNACC | 1 cut(s) | 650 |
| BstSCI | CCNGG | 3 cut(s) | 160, 315, 528 |
| BstSFI | CTRYAG | 2 cut(s) | 579, 983 |
| BstSLI | GKGCMC | 2 cut(s) | 696, 718 |
| BstV1I | GCAGC | 2 cut(s) | 224, 719 |
| BstV2I | GAAGAC | 1 cut(s) | 241 |
| BstX2I | RGATCY | 3 cut(s) | 110, 196, 556 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 511 |
| BstYI | RGATCY | 3 cut(s) | 110, 196, 556 |
| BsuRI | GGCC | 1 cut(s) | 395 |
| BtgI | CCRYGG | 1 cut(s) | 267 |
| BtsCI | GGATG | 1 cut(s) | 228 |
| BtsIMutI | CAGTG | 1 cut(s) | 564 |
| Cac8I | GCNNGC | 3 cut(s) | 99, 346, 910 |
| CfoI | GCGC | 1 cut(s) | 953 |
| Cfr10I | RCCGGY | 1 cut(s) | 242 |
| Cfr13I | GGNCC | 1 cut(s) | 590 |
| Csp6I | GTAC | 3 cut(s) | 584, 625, 757 |
| CspAI | ACCGGT | 1 cut(s) | 242 |
| CviAII | CATG | 8 cut(s) | 57, 83, 191, 268, 345, 444, 628, 737 |
| CviQI | GTAC | 3 cut(s) | 584, 625, 757 |
| DdeI | CTNAG | 2 cut(s) | 68, 210 |
| DpnI | GATC | 5 cut(s) | 112, 198, 558, 773, 846 |
| DpnII | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| EaeI | YGGCCR | 1 cut(s) | 393 |
| Eam1104I | CTCTTC | 1 cut(s) | 493 |
| EarI | CTCTTC | 1 cut(s) | 493 |
| Ecl136II | GAGCTC | 1 cut(s) | 486 |
| Eco130I | CCWWGG | 2 cut(s) | 232, 267 |
| Eco24I | GRGCYC | 2 cut(s) | 316, 488 |
| Eco31I | GGTCTC | 1 cut(s) | 206 |
| Eco47I | GGWCC | 1 cut(s) | 590 |
| Eco53kI | GAGCTC | 1 cut(s) | 486 |
| Eco57I | CTGAAG | 2 cut(s) | 62, 144 |
| Eco88I | CYCGRG | 1 cut(s) | 290 |
| Eco91I | GGTNACC | 1 cut(s) | 650 |
| EcoICRI | GAGCTC | 1 cut(s) | 486 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 123 |
| EcoO65I | GGTNACC | 1 cut(s) | 650 |
| EcoRII | CCWGG | 3 cut(s) | 160, 315, 528 |
| EcoT14I | CCWWGG | 2 cut(s) | 232, 267 |
| EcoT38I | GRGCYC | 2 cut(s) | 316, 488 |
| ErhI | CCWWGG | 2 cut(s) | 232, 267 |
| FaeI | CATG | 8 cut(s) | 60, 86, 194, 271, 348, 447, 631, 740 |
| FaqI | GGGAC | 1 cut(s) | 645 |
| FatI | CATG | 8 cut(s) | 56, 82, 190, 267, 344, 443, 627, 736 |
| Fnu4HI | GCNGC | 3 cut(s) | 238, 708, 928 |
| FokI | GGATG | 1 cut(s) | 215 |
| FriOI | GRGCYC | 2 cut(s) | 316, 488 |
| Fsp4HI | GCNGC | 3 cut(s) | 238, 708, 928 |
| FspBI | CTAG | 2 cut(s) | 350, 387 |
| GlaI | GCGC | 1 cut(s) | 952 |
| GluI | GCNGC | 3 cut(s) | 238, 708, 928 |
| GsaI | CCCAGC | 1 cut(s) | 332 |
| GsuI | CTGGAG | 1 cut(s) | 551 |
| HaeII | RGCGCY | 1 cut(s) | 954 |
| HaeIII | GGCC | 1 cut(s) | 395 |
| HapII | CCGG | 1 cut(s) | 243 |
| HhaI | GCGC | 1 cut(s) | 953 |
| Hin1II | CATG | 8 cut(s) | 60, 86, 194, 271, 348, 447, 631, 740 |
| Hin6I | GCGC | 1 cut(s) | 951 |
| HinP1I | GCGC | 1 cut(s) | 951 |
| HindIII | AAGCTT | 1 cut(s) | 476 |
| HinfI | GANTC | 3 cut(s) | 64, 353, 784 |
| HpaII | CCGG | 1 cut(s) | 243 |
| HphI | GGTGA | 2 cut(s) | 254, 662 |
| Hpy166II | GTNNAC | 3 cut(s) | 379, 625, 694 |
| Hpy188I | TCNGA | 2 cut(s) | 14, 69 |
| Hpy188III | TCNNGA | 2 cut(s) | 731, 788 |
| Hpy8I | GTNNAC | 3 cut(s) | 379, 625, 694 |
| Hpy99I | CGWCG | 1 cut(s) | 772 |
| HpyAV | CCTTC | 7 cut(s) | 119, 226, 272, 314, 334, 737, 967 |
| HpyCH4III | ACNGT | 7 cut(s) | 22, 106, 364, 511, 568, 883, 900 |
| HpyCH4IV | ACGT | 1 cut(s) | 273 |
| HpyCH4V | TGCA | 7 cut(s) | 194, 240, 539, 694, 707, 746, 966 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 713 |
| HpyF3I | CTNAG | 2 cut(s) | 68, 210 |
| HpySE526I | ACGT | 1 cut(s) | 273 |
| Hsp92II | CATG | 8 cut(s) | 60, 86, 194, 271, 348, 447, 631, 740 |
| HspAI | GCGC | 1 cut(s) | 951 |
| Kzo9I | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| LguI | GCTCTTC | 1 cut(s) | 493 |
| LmnI | GCTCC | 2 cut(s) | 164, 643 |
| Lsp1109I | GCAGC | 2 cut(s) | 224, 719 |
| LweI | GCATC | 2 cut(s) | 448, 694 |
| MaeI | CTAG | 2 cut(s) | 350, 387 |
| MaeII | ACGT | 1 cut(s) | 273 |
| MaeIII | GTNAC | 6 cut(s) | 28, 301, 470, 562, 650, 866 |
| MalI | GATC | 5 cut(s) | 112, 198, 558, 773, 846 |
| MboI | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| MboII | GAAGA | 5 cut(s) | 17, 241, 437, 480, 715 |
| MflI | RGATCY | 3 cut(s) | 110, 196, 556 |
| MhlI | GDGCHC | 5 cut(s) | 169, 316, 488, 696, 718 |
| MlsI | TGGCCA | 1 cut(s) | 395 |
| MluCI | AATT | 1 cut(s) | 333 |
| MluNI | TGGCCA | 1 cut(s) | 395 |
| MnlI | CCTC | 7 cut(s) | 8, 64, 286, 445, 513, 537, 747 |
| Mox20I | TGGCCA | 1 cut(s) | 395 |
| MscI | TGGCCA | 1 cut(s) | 395 |
| MseI | TTAA | 2 cut(s) | 851, 861 |
| MslI | CAYNNNNRTG | 3 cut(s) | 686, 699, 741 |
| Msp20I | TGGCCA | 1 cut(s) | 395 |
| MspI | CCGG | 1 cut(s) | 243 |
| MspR9I | CCNGG | 3 cut(s) | 162, 317, 530 |
| Mva1269I | GAATGC | 1 cut(s) | 910 |
| MvaI | CCWGG | 3 cut(s) | 162, 317, 530 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 713 |
| NcoI | CCATGG | 1 cut(s) | 267 |
| NdeII | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| NlaIII | CATG | 8 cut(s) | 60, 86, 194, 271, 348, 447, 631, 740 |
| NlaIV | GGNNCC | 1 cut(s) | 639 |
| NmuCI | GTSAC | 2 cut(s) | 562, 650 |
| NspI | RCATGY | 2 cut(s) | 348, 740 |
| PaeI | GCATGC | 1 cut(s) | 348 |
| PciSI | GCTCTTC | 1 cut(s) | 493 |
| PctI | GAATGC | 1 cut(s) | 910 |
| PfeI | GAWTC | 3 cut(s) | 64, 353, 784 |
| PinAI | ACCGGT | 1 cut(s) | 242 |
| PkrI | GCNGC | 3 cut(s) | 239, 709, 929 |
| Psp124BI | GAGCTC | 1 cut(s) | 488 |
| Psp6I | CCWGG | 3 cut(s) | 160, 315, 528 |
| PspEI | GGTNACC | 1 cut(s) | 650 |
| PspFI | CCCAGC | 1 cut(s) | 328 |
| PspGI | CCWGG | 3 cut(s) | 160, 315, 528 |
| PspN4I | GGNNCC | 1 cut(s) | 639 |
| PspPI | GGNCC | 1 cut(s) | 590 |
| PsuI | RGATCY | 3 cut(s) | 110, 196, 556 |
| RsaI | GTAC | 3 cut(s) | 585, 626, 758 |
| RsaNI | GTAC | 3 cut(s) | 584, 625, 757 |
| RseI | CAYNNNNRTG | 3 cut(s) | 686, 699, 741 |
| SacI | GAGCTC | 1 cut(s) | 488 |
| SapI | GCTCTTC | 1 cut(s) | 493 |
| SaqAI | TTAA | 2 cut(s) | 851, 861 |
| SatI | GCNGC | 3 cut(s) | 238, 708, 928 |
| Sau3AI | GATC | 5 cut(s) | 110, 196, 556, 771, 844 |
| Sau96I | GGNCC | 1 cut(s) | 590 |
| ScaI | AGTACT | 1 cut(s) | 585 |
| ScrFI | CCNGG | 3 cut(s) | 162, 317, 530 |
| SduI | GDGCHC | 5 cut(s) | 169, 316, 488, 696, 718 |
| SfaNI | GCATC | 2 cut(s) | 448, 694 |
| SfcI | CTRYAG | 2 cut(s) | 579, 983 |
| SgrAI | CRCCGGYG | 1 cut(s) | 242 |
| SinI | GGWCC | 1 cut(s) | 590 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 686, 699, 741 |
| SphI | GCATGC | 1 cut(s) | 348 |
| Sse9I | AATT | 1 cut(s) | 333 |
| SsiI | CCGC | 2 cut(s) | 810, 927 |
| SspMI | CTAG | 2 cut(s) | 350, 387 |
| SstI | GAGCTC | 1 cut(s) | 488 |
| StyD4I | CCNGG | 3 cut(s) | 160, 315, 528 |
| StyI | CCWWGG | 2 cut(s) | 232, 267 |
| TaaI | ACNGT | 7 cut(s) | 22, 106, 364, 511, 568, 883, 900 |
| TaiI | ACGT | 1 cut(s) | 276 |
| TaqI | TCGA | 2 cut(s) | 466, 770 |
| TasI | AATT | 1 cut(s) | 333 |
| TatI | WGTACW | 2 cut(s) | 583, 624 |
| TauI | GCSGC | 1 cut(s) | 930 |
| TfiI | GAWTC | 3 cut(s) | 64, 353, 784 |
| Tru1I | TTAA | 2 cut(s) | 851, 861 |
| Tru9I | TTAA | 2 cut(s) | 851, 861 |
| TscAI | CASTG | 1 cut(s) | 571 |
| TseFI | GTSAC | 2 cut(s) | 562, 650 |
| TseI | GCWGC | 2 cut(s) | 237, 707 |
| Tsp45I | GTSAC | 2 cut(s) | 562, 650 |
| TspDTI | ATGAA | 4 cut(s) | 179, 237, 818, 908 |
| TspRI | CASTG | 1 cut(s) | 571 |
| VneI | GTGCAC | 1 cut(s) | 692 |
| VpaK11BI | GGWCC | 1 cut(s) | 590 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 123 |
| XapI | RAATTY | 1 cut(s) | 333 |
| XceI | RCATGY | 2 cut(s) | 348, 740 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 313, 511 |
| XspI | CTAG | 2 cut(s) | 350, 387 |
| ZrmI | AGTACT | 1 cut(s) | 585 |