Rroxscaffold_4G00304890

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000382
Physical Location & Seq
Reverse (-)
25518713 .. 25526651
7939 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00304890.1

Sequence Viewer

Length: 1422 bp
ATGGAGATTAAAGGTTACAAAGGAACTAATGTATCATCAACGAAACTGTTGAATACTGGCTTCAAATTTAAATGCGGCCTTGGGGAAATGTTTGATGGCGCTATTCAATCTTGCAAAGAGAAGGAACAAAAGAAAGATGTAAGCTTCCTCACAGCTCTACCAGGAGCAAAAGAAAGGCTCCAAATTTTCAACGCGGACCTGAGCAACCCGGAAAGTTTCAATGCAGCCATCCAAGGATGCGTCGGAGTGTTCCATGTTGCTACTCCAGTTGACTTCGAAGACAAGGAACCTGAACCAGTAGTGACCAAACGATCAGTCGATGGAGCCCTTGGTATCCTCAAGGCGTGCCTATATGCAAAAACAGTGAAACGTGTTGTGTACACTTCTAGTGTATTTGCTGTTCAATTTAACAACAAAAATGTGGAAGACATGGATGAGAGTTTTTGGAGTGACACAGATTACATTAAAGCTTTAAAGCCTTATCGAGGCTCATACATGATTTCGAAGACATTGACTGAAAGAGCAGTTTTCGAATTTTCGGAGAAAAATGGATTGGATGTTGTGACAGTAATTCCTTCTTTGGTTGTTGGCCCCTTCATTTGTCCCAAGTTCCCCAGCTCTGTTCGAAGCGCATTGGCTCTGGTTTTAGTGGTACATGTGGATGATGTCGCCAGAGCGCACATTTTCCTTTTCGAACATCATGATGCAAAAGGGAGAAACAATTGCTCATCAAATGTCATAACAATTGAAGAAATGGCCAAGTTCCTTTCTGCCAAATTCCCCGAATTTCAAATACCCTCAGCAGAGTCATTGAAGGAAGTTAAAGGTCCTAAGATTCCTGGTCTGTCATCAAAGAAACTCTTAGATACGGGTTTCAAATTTAAGTATGGGGTTGATGAGATGTTTAGTGAGGCAATTCACTGCTGCAAAGAGAATGCAAAGCCTCCGCCTCGTCAACATCATGGTCAAAGGAGAAGGAAAGCCACCGCCTCGTCGTCATCGGGTCGTGGACGAAGAGAAGTCATCGCCTCGTCGACATCAAGCTCATGGACTAAGGGAAGCCTCCGCCTCGTGGATGTCAAGGTCGAGAACGAAGGGAATCCTCCTCCTCGTTGTCATCGGTTTAGGGACGAAGGGAAGTCTCGCCTCGTTCTCGTCGAGGTTAACGACGAAGAGAAGCCTCCTACTCGTAGTCACCAGACAGTTACTAACTTAGGCATTGGAGGGTTTTCTATAGTTATTCCCCCTTCTCCTCAAATCGTGGACGAAGTGAAGCCCCGCATCGTCGATGTCAAGGCTAAACGTGTAGGAAAGCCTCCGCCTCGTCATTGTCAAGTCGTGGACAAAGAGAAGTCATCGCCTCATCGACGTCAAGCTCATGGACGAAGGGAAGCCTCCGCCTCATCGATGTCAAGGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00943 ko01110 map00943 map01110
Pfam Domains
Protein Families
Epimerase

Protein Analysis

473

Amino Acids

52.36

Weight (kDa)

9.38

Isoelectric Point (pI)

39.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Epimerase PF01370 44 - 238 2.8e-13 NAD dependent epimerase/dehydratase family
NAD_binding_4 PF07993 49 - 197 7e-09 Male sterility protein
3Beta_HSD PF01073 62 - 198 4.3e-10 3-beta hydroxysteroid dehydrogenase/isomerase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000382)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45400 AT2G45400 AT2G45400 AT2G45400
fragaria_vesca FvH4_7g11750 FvH4_7g11760 FvH4_7g11780 FvH4_7g11781 FvH4_7g11781 FvH4_7g11790 FvH4_7g11790
malus_domestica MD02G1205000.v1.1 MD07G1121700.v1.1 MD08G1231300.v1.1 MD08G1231400.v1.1 MD08G1231500.v1.1
prunus_persica Prupe.2G144600_v2.0.a1 Prupe.2G144700_v2.0.a1 Prupe.2G144800_v2.0.a1
pyrus_communis pycom08g20120
rosa_chinensis RchiOBHm_Chr1g0350271 RchiOBHm_Chr1g0350281 RchiOBHm_Chr1g0350311 RchiOBHm_Chr1g0350321 RchiOBHm_Chr1g0350341 RchiOBHm_Chr1g0350361 RchiOBHm_Chr1g0350371 RchiOBHm_Chr1g0350401 RchiOBHm_Chr1g0350411 RchiOBHm_Chr1g0350431 RchiOBHm_Chr1g0350441 RchiOBHm_Chr1g0350471
rosa_laevigata RLG00000028483 RLG00000028485 RLG00000028486 RLG00000028487 RLG00000028488 RLG00000028489 RLG00000028493 RLG00000028494 RLG00000035411
rosa_multiflora Rmu_co8173820.1_g000001 Rmu_sc0001037.1_g000006 Rmu_sc0001864.1_g000002 Rmu_sc0001864.1_g000009 Rmu_ssc0000083.1_g000008 Rmu_ssc0000083.1_g000013 Rmu_ssc0000083.1_g000018
rosa_roxburghii Rroxscaffold_4G00304840 Rroxscaffold_4G00304860 Rroxscaffold_4G00304890 Rroxscaffold_4G00304900 Rroxscaffold_4G00304920 Rroxscaffold_4G00304930
rosa_rugosa Rorug01G0210800 Rorug01G0210900 Rorug01G0211000 Rorug01G0211100 Rorug01G0211200 Rorug01G0211300 Rorug01G0211300 Rorug01G0211400
rosa_samantha Rh1AG225500 Rh1AG225600 Rh1AG225700 Rh1AG225800 Rh1AG225900 Rh1AG226000 Rh1BG193400 Rh1BG193600 Rh1BG193700 Rh1BG193800 Rh1BG193900 Rh1BG194000 Rh1BG194200 Rh1CG210300 Rh1CG210500 Rh1CG210600 Rh1CG210700 Rh1CG210900 Rh1DG221700 Rh1DG221900 Rh1DG222100 Rh1DG222200 Rh1DG222300 Rh1DG222400 Rh1DG222500 Rh2BG259100 Rh3DG280100 Rh5AG528000
rosa_wichuraiana Rw0G018730 Rw0G018740 Rw0G018750 Rw0G018760 Rw0G018770 Rw0G018790 Rw1G019390 Rw1G019410 Rw1G019420 Rw1G019430 Rw1G019440 Rw1G019450 Rw1G019480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1372
AccI GTMKAC 1 cut(s) 1034
AccII CGCG 1 cut(s) 194
AciI CCGC 8 cut(s) 75, 194, 947, 987, 1066, 1279, 1319, 1398
AcoI YGGCCR 1 cut(s) 756
AcsI RAATTY 6 cut(s) 65, 183, 533, 776, 785, 878
AcyI GRCGYC 1 cut(s) 1369
AfaI GTAC 2 cut(s) 380, 654
AfiI CCNNNNNNNGG 2 cut(s) 485, 1072
AflIII ACRYGT 3 cut(s) 370, 655, 1303
AjnI CCWGG 2 cut(s) 160, 838
AjuI GAANNNNNNNTTGG 2 cut(s) 536, 568
AluBI AGCT 6 cut(s) 144, 155, 470, 618, 1044, 1376
AluI AGCT 6 cut(s) 144, 155, 470, 618, 1044, 1376
Alw26I GTCTC 1 cut(s) 1146
AoxI GGCC 3 cut(s) 76, 589, 756
ApeKI GCWGC 2 cut(s) 224, 924
ApoI RAATTY 6 cut(s) 65, 183, 533, 776, 785, 878
ArsI GACNNNNNNTTYG 2 cut(s) 300, 332
AspLEI GCGC 3 cut(s) 101, 632, 679
AspS9I GGNCC 3 cut(s) 196, 590, 827
AsuC2I CCSGG 1 cut(s) 209
AsuHPI GGTGA 1 cut(s) 1187
AsuII TTCGAA 5 cut(s) 276, 503, 531, 625, 693
AvaII GGWCC 2 cut(s) 196, 827
BaeI ACNNNNGTAYC 2 cut(s) 15, 48
BalI TGGCCA 1 cut(s) 758
BanII GRGCYC 1 cut(s) 328
BauI CACGAG 1 cut(s) 1070
BbsI GAAGAC 3 cut(s) 285, 432, 512
BbvCI CCTCAGC 1 cut(s) 799
BbvI GCAGC 2 cut(s) 236, 911
BccI CCATC 3 cut(s) 89, 236, 314
BciT130I CCWGG 2 cut(s) 162, 840
BciVI GTATCC 1 cut(s) 344
BcnI CCSGG 1 cut(s) 209
BcoDI GTCTC 1 cut(s) 1146
BfaI CTAG 1 cut(s) 387
BfmI CTRYAG 1 cut(s) 1233
BfoI RGCGCY 1 cut(s) 102
BfuI GTATCC 1 cut(s) 344
BisI GCNGC 3 cut(s) 76, 225, 925
BlsI GCNGC 3 cut(s) 77, 226, 926
Bme1390I CCNGG 3 cut(s) 162, 209, 840
Bme18I GGWCC 2 cut(s) 196, 827
BmgT120I GGNCC 3 cut(s) 196, 590, 827
BmiI GGNNCC 4 cut(s) 179, 288, 325, 592
BmrFI CCNGG 3 cut(s) 162, 209, 840
BmsI GCATC 3 cut(s) 227, 694, 1290
BpiI GAAGAC 3 cut(s) 285, 432, 512
BpmI CTGGAG 1 cut(s) 249
Bpu10I CCTNAGC 2 cut(s) 200, 799
Bpu14I TTCGAA 5 cut(s) 276, 503, 531, 625, 693
BpuEI CTTGAG 1 cut(s) 323
BpuMI CCSGG 1 cut(s) 209
Bsa29I ATCGAT 1 cut(s) 1406
BsaHI GRCGYC 1 cut(s) 1369
BsaJI CCNNGG 3 cut(s) 79, 232, 328
Bsc4I CCNNNNNNNGG 2 cut(s) 485, 1072
Bse1I ACTGG 3 cut(s) 61, 266, 296
BseBI CCWGG 2 cut(s) 162, 840
BseCI ATCGAT 1 cut(s) 1406
BseDI CCNNGG 3 cut(s) 79, 232, 328
BseGI GGATG 6 cut(s) 228, 242, 439, 562, 667, 1081
BseLI CCNNNNNNNGG 2 cut(s) 485, 1072
BseMII CTCAG 2 cut(s) 191, 813
BseNI ACTGG 3 cut(s) 61, 266, 296
BseRI GAGGAG 3 cut(s) 1095, 1098, 1242
BseXI GCAGC 2 cut(s) 236, 911
BseYI CCCAGC 1 cut(s) 614
Bsh1236I CGCG 1 cut(s) 194
BshFI GGCC 3 cut(s) 78, 591, 758
BshVI ATCGAT 1 cut(s) 1406
BsiSI CCGG 1 cut(s) 209
BslFI GGGAC 2 cut(s) 588, 1142
BslI CCNNNNNNNGG 2 cut(s) 485, 1072
BsmAI GTCTC 1 cut(s) 1146
BsmFI GGGAC 2 cut(s) 588, 1142
BsmI GAATGC 1 cut(s) 940
BsnI GGCC 3 cut(s) 78, 591, 758
Bsp119I TTCGAA 5 cut(s) 276, 503, 531, 625, 693
Bsp1286I GDGCHC 1 cut(s) 328
Bsp1407I TGTACA 1 cut(s) 378
Bsp143I GATC 1 cut(s) 311
BspACI CCGC 8 cut(s) 75, 194, 947, 987, 1066, 1279, 1319, 1398
BspANI GGCC 3 cut(s) 78, 591, 758
BspCNI CTCAG 2 cut(s) 192, 812
BspDI ATCGAT 1 cut(s) 1406
BspFNI CGCG 1 cut(s) 194
BspHI TCATGA 1 cut(s) 700
BspLI GGNNCC 4 cut(s) 179, 288, 325, 592
BspT104I TTCGAA 5 cut(s) 276, 503, 531, 625, 693
BsrGI TGTACA 1 cut(s) 378
BsrI ACTGG 3 cut(s) 61, 266, 296
BssECI CCNNGG 3 cut(s) 79, 232, 328
BssMI GATC 1 cut(s) 311
BssNI GRCGYC 1 cut(s) 1369
BssSI CACGAG 1 cut(s) 1070
BssT1I CCWWGG 3 cut(s) 79, 232, 328
Bst2BI CACGAG 1 cut(s) 1070
Bst2UI CCWGG 2 cut(s) 162, 840
Bst4CI ACNGT 4 cut(s) 48, 364, 568, 1204
Bst6I CTCTTC 2 cut(s) 1009, 1167
BstACI GRCGYC 1 cut(s) 1369
BstAUI TGTACA 1 cut(s) 378
BstBI TTCGAA 5 cut(s) 276, 503, 531, 625, 693
BstC8I GCNNGC 1 cut(s) 346
BstDEI CTNAG 6 cut(s) 200, 799, 831, 862, 1053, 1213
BstENI CCTNNNNNAGG 1 cut(s) 483
BstF5I GGATG 6 cut(s) 228, 242, 439, 562, 667, 1081
BstFNI CGCG 1 cut(s) 194
BstH2I RGCGCY 1 cut(s) 102
BstHHI GCGC 3 cut(s) 101, 632, 679
BstKTI GATC 1 cut(s) 314
BstMAI GTCTC 1 cut(s) 1146
BstMBI GATC 1 cut(s) 311
BstNI CCWGG 2 cut(s) 162, 840
BstNSI RCATGY 1 cut(s) 659
BstSCI CCNGG 3 cut(s) 160, 207, 838
BstSFI CTRYAG 1 cut(s) 1233
BstUI CGCG 1 cut(s) 194
BstV1I GCAGC 2 cut(s) 236, 911
BstV2I GAAGAC 3 cut(s) 285, 432, 512
Bsu15I ATCGAT 1 cut(s) 1406
BsuI GTATCC 1 cut(s) 344
BsuRI GGCC 3 cut(s) 78, 591, 758
BsuTUI ATCGAT 1 cut(s) 1406
BtgZI GCGATG 2 cut(s) 1009, 1341
BtsCI GGATG 6 cut(s) 228, 242, 439, 562, 667, 1081
BtsI GCAGTG 1 cut(s) 919
BtsIMutI CAGTG 2 cut(s) 369, 919
Cac8I GCNNGC 1 cut(s) 346
CciI TCATGA 1 cut(s) 700
CfoI GCGC 3 cut(s) 101, 632, 679
Cfr13I GGNCC 3 cut(s) 196, 590, 827
ClaI ATCGAT 1 cut(s) 1406
CseI GACGC 1 cut(s) 229
Csp6I GTAC 2 cut(s) 379, 653
CviAII CATG 8 cut(s) 254, 430, 496, 656, 701, 962, 1047, 1379
CviQI GTAC 2 cut(s) 379, 653
DdeI CTNAG 6 cut(s) 200, 799, 831, 862, 1053, 1213
DpnI GATC 1 cut(s) 313
DpnII GATC 1 cut(s) 311
DraI TTTAAA 2 cut(s) 70, 474
EaeI YGGCCR 1 cut(s) 756
Eam1104I CTCTTC 2 cut(s) 1009, 1167
EarI CTCTTC 2 cut(s) 1009, 1167
EciI GGCGGA 4 cut(s) 936, 1055, 1308, 1387
Eco130I CCWWGG 3 cut(s) 79, 232, 328
Eco24I GRGCYC 1 cut(s) 328
Eco47I GGWCC 2 cut(s) 196, 827
EcoNI CCTNNNNNAGG 1 cut(s) 483
EcoO109I RGGNCCY 1 cut(s) 827
EcoRII CCWGG 2 cut(s) 160, 838
EcoT14I CCWWGG 3 cut(s) 79, 232, 328
EcoT38I GRGCYC 1 cut(s) 328
ErhI CCWWGG 3 cut(s) 79, 232, 328
FaeI CATG 8 cut(s) 257, 433, 499, 659, 704, 965, 1050, 1382
FalI AAGNNNNNCTT 2 cut(s) 845, 877
FaqI GGGAC 2 cut(s) 588, 1142
FatI CATG 8 cut(s) 253, 429, 495, 655, 700, 961, 1046, 1378
FauI CCCGC 1 cut(s) 1286
FblI GTMKAC 1 cut(s) 1034
Fnu4HI GCNGC 3 cut(s) 76, 225, 925
FokI GGATG 6 cut(s) 215, 249, 446, 569, 674, 1088
FriOI GRGCYC 1 cut(s) 328
Fsp4HI GCNGC 3 cut(s) 76, 225, 925
FspBI CTAG 1 cut(s) 387
GlaI GCGC 3 cut(s) 100, 631, 678
GluI GCNGC 3 cut(s) 76, 225, 925
GsaI CCCAGC 1 cut(s) 618
GsuI CTGGAG 1 cut(s) 249
HaeII RGCGCY 1 cut(s) 102
HaeIII GGCC 3 cut(s) 78, 591, 758
HapII CCGG 1 cut(s) 209
HgaI GACGC 1 cut(s) 229
HhaI GCGC 3 cut(s) 101, 632, 679
Hin1I GRCGYC 1 cut(s) 1369
Hin1II CATG 8 cut(s) 257, 433, 499, 659, 704, 965, 1050, 1382
Hin6I GCGC 3 cut(s) 99, 630, 677
HinP1I GCGC 3 cut(s) 99, 630, 677
HincII GTYRAC 4 cut(s) 271, 956, 1035, 1165
HindII GTYRAC 4 cut(s) 271, 956, 1035, 1165
HindIII AAGCTT 2 cut(s) 142, 468
HinfI GANTC 3 cut(s) 806, 835, 1099
HpaI GTTAAC 1 cut(s) 1165
HpaII CCGG 1 cut(s) 209
HphI GGTGA 1 cut(s) 1187
Hpy166II GTNNAC 9 cut(s) 271, 379, 381, 956, 1010, 1035, 1165, 1264, 1342
Hpy188I TCNGA 2 cut(s) 245, 541
Hpy188III TCNNGA 2 cut(s) 701, 1087
Hpy8I GTNNAC 9 cut(s) 271, 379, 381, 956, 1010, 1035, 1165, 1264, 1342
Hpy99I CGWCG 7 cut(s) 245, 997, 1036, 1160, 1172, 1289, 1371
HpyAV CCTTC 9 cut(s) 115, 585, 604, 808, 969, 1088, 1127, 1257, 1380
HpyCH4III ACNGT 4 cut(s) 48, 364, 568, 1204
HpyCH4IV ACGT 3 cut(s) 370, 1303, 1369
HpyCH4V TGCA 6 cut(s) 114, 224, 356, 707, 927, 938
HpyF3I CTNAG 6 cut(s) 200, 799, 831, 862, 1053, 1213
HpySE526I ACGT 3 cut(s) 370, 1303, 1369
Hsp92I GRCGYC 1 cut(s) 1369
Hsp92II CATG 8 cut(s) 257, 433, 499, 659, 704, 965, 1050, 1382
HspAI GCGC 3 cut(s) 99, 630, 677
KspAI GTTAAC 1 cut(s) 1165
Kzo9I GATC 1 cut(s) 311
LmnI GCTCC 3 cut(s) 164, 183, 323
Lsp1109I GCAGC 2 cut(s) 236, 911
LweI GCATC 3 cut(s) 227, 694, 1290
MaeI CTAG 1 cut(s) 387
MaeII ACGT 3 cut(s) 370, 1303, 1369
MaeIII GTNAC 6 cut(s) 14, 301, 449, 562, 1193, 1204
MalI GATC 1 cut(s) 313
MboI GATC 1 cut(s) 311
MboII GAAGA 6 cut(s) 290, 437, 517, 761, 1026, 1184
MfeI CAATTG 2 cut(s) 721, 744
MhlI GDGCHC 1 cut(s) 328
MlsI TGGCCA 1 cut(s) 758
MluNI TGGCCA 1 cut(s) 758
MlyI GAGTC 1 cut(s) 815
MmeI TCCRAC 1 cut(s) 223
Mox20I TGGCCA 1 cut(s) 758
MscI TGGCCA 1 cut(s) 758
MseI TTAA 8 cut(s) 9, 69, 408, 465, 473, 822, 882, 1164
MslI CAYNNNNRTG 2 cut(s) 660, 702
Msp20I TGGCCA 1 cut(s) 758
MspI CCGG 1 cut(s) 209
MspR9I CCNGG 3 cut(s) 162, 209, 840
MunI CAATTG 2 cut(s) 721, 744
Mva1269I GAATGC 1 cut(s) 940
MvaI CCWGG 2 cut(s) 162, 840
MvnI CGCG 1 cut(s) 194
NciI CCSGG 1 cut(s) 209
NdeII GATC 1 cut(s) 311
NlaIII CATG 8 cut(s) 257, 433, 499, 659, 704, 965, 1050, 1382
NlaIV GGNNCC 4 cut(s) 179, 288, 325, 592
NmuCI GTSAC 4 cut(s) 301, 449, 562, 1193
NspI RCATGY 1 cut(s) 659
NspV TTCGAA 5 cut(s) 276, 503, 531, 625, 693
PagI TCATGA 1 cut(s) 700
PciI ACATGT 1 cut(s) 655
PcsI WCGNNNNNNNCGW 2 cut(s) 1155, 1164
PctI GAATGC 1 cut(s) 940
PfeI GAWTC 2 cut(s) 835, 1099
PkrI GCNGC 3 cut(s) 77, 226, 926
PleI GAGTC 1 cut(s) 814
PpsI GAGTC 1 cut(s) 814
PpuMI RGGWCCY 1 cut(s) 827
PscI ACATGT 1 cut(s) 655
Psp5II RGGWCCY 1 cut(s) 827
Psp6I CCWGG 2 cut(s) 160, 838
PspFI CCCAGC 1 cut(s) 614
PspGI CCWGG 2 cut(s) 160, 838
PspN4I GGNNCC 4 cut(s) 179, 288, 325, 592
PspPI GGNCC 3 cut(s) 196, 590, 827
PspPPI RGGWCCY 1 cut(s) 827
PsrI GAACNNNNNNTAC 2 cut(s) 384, 416
RsaI GTAC 2 cut(s) 380, 654
RsaNI GTAC 2 cut(s) 379, 653
RseI CAYNNNNRTG 2 cut(s) 660, 702
SalI GTCGAC 1 cut(s) 1033
SaqAI TTAA 8 cut(s) 9, 69, 408, 465, 473, 822, 882, 1164
SatI GCNGC 3 cut(s) 76, 225, 925
Sau3AI GATC 1 cut(s) 311
Sau96I GGNCC 3 cut(s) 196, 590, 827
SchI GAGTC 1 cut(s) 815
ScrFI CCNGG 3 cut(s) 162, 209, 840
SduI GDGCHC 1 cut(s) 328
SfaNI GCATC 3 cut(s) 227, 694, 1290
SfcI CTRYAG 1 cut(s) 1233
SfuI TTCGAA 5 cut(s) 276, 503, 531, 625, 693
SinI GGWCC 2 cut(s) 196, 827
SmiI ATTTAAAT 1 cut(s) 70
SmiMI CAYNNNNRTG 2 cut(s) 660, 702
SmlI CTYRAG 1 cut(s) 338
SmoI CTYRAG 1 cut(s) 338
SsiI CCGC 8 cut(s) 75, 194, 947, 987, 1066, 1279, 1319, 1398
SspMI CTAG 1 cut(s) 387
StyD4I CCNGG 3 cut(s) 160, 207, 838
StyI CCWWGG 3 cut(s) 79, 232, 328
SwaI ATTTAAAT 1 cut(s) 70
TaaI ACNGT 4 cut(s) 48, 364, 568, 1204
TaiI ACGT 3 cut(s) 373, 1306, 1372
TatI WGTACW 1 cut(s) 378
TauI GCSGC 1 cut(s) 78
TfiI GAWTC 2 cut(s) 835, 1099
Tru1I TTAA 8 cut(s) 9, 69, 408, 465, 473, 822, 882, 1164
Tru9I TTAA 8 cut(s) 9, 69, 408, 465, 473, 822, 882, 1164
TscAI CASTG 2 cut(s) 369, 926
TseFI GTSAC 4 cut(s) 301, 449, 562, 1193
TseI GCWGC 2 cut(s) 224, 924
Tsp45I GTSAC 4 cut(s) 301, 449, 562, 1193
TspDTI ATGAA 1 cut(s) 586
TspRI CASTG 2 cut(s) 369, 926
VpaK11BI GGWCC 2 cut(s) 196, 827
XagI CCTNNNNNAGG 1 cut(s) 483
XapI RAATTY 6 cut(s) 65, 183, 533, 776, 785, 878
XceI RCATGY 1 cut(s) 659
XmiI GTMKAC 1 cut(s) 1034
XspI CTAG 1 cut(s) 387
ZraI GACGTC 1 cut(s) 1370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.