Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 452 |
| AciI | CCGC | 2 cut(s) | 444, 1124 |
| AcsI | RAATTY | 5 cut(s) | 20, 311, 520, 721, 849 |
| AcuI | CTGAAG | 3 cut(s) | 641, 1068, 1163 |
| AfaI | GTAC | 3 cut(s) | 86, 692, 861 |
| AflII | CTTAAG | 2 cut(s) | 863, 1199 |
| AgsI | TTSAA | 7 cut(s) | 43, 116, 183, 625, 764, 784, 931 |
| AjiI | CACGTC | 1 cut(s) | 499 |
| AjnI | CCWGG | 1 cut(s) | 1084 |
| AluBI | AGCT | 7 cut(s) | 97, 653, 661, 677, 758, 776, 1052 |
| AluI | AGCT | 7 cut(s) | 97, 653, 661, 677, 758, 776, 1052 |
| Ama87I | CYCGRG | 1 cut(s) | 12 |
| ApeKI | GCWGC | 1 cut(s) | 530 |
| ApoI | RAATTY | 5 cut(s) | 20, 311, 520, 721, 849 |
| AseI | ATTAAT | 1 cut(s) | 1152 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 178, 654, 905 |
| AspA2I | CCTAGG | 1 cut(s) | 769 |
| AspS9I | GGNCC | 1 cut(s) | 427 |
| AsuC2I | CCSGG | 1 cut(s) | 695 |
| AsuHPI | GGTGA | 1 cut(s) | 1114 |
| AvaI | CYCGRG | 1 cut(s) | 12 |
| AvaII | GGWCC | 1 cut(s) | 427 |
| AvrII | CCTAGG | 1 cut(s) | 769 |
| BbsI | GAAGAC | 2 cut(s) | 740, 1169 |
| BbvI | GCAGC | 1 cut(s) | 517 |
| BccI | CCATC | 1 cut(s) | 513 |
| BciT130I | CCWGG | 1 cut(s) | 1086 |
| BciVI | GTATCC | 1 cut(s) | 335 |
| BcnI | CCSGG | 1 cut(s) | 695 |
| BfaI | CTAG | 5 cut(s) | 368, 579, 755, 770, 827 |
| BfmI | CTRYAG | 1 cut(s) | 984 |
| BfrI | CTTAAG | 2 cut(s) | 863, 1199 |
| BfuI | GTATCC | 1 cut(s) | 335 |
| BisI | GCNGC | 2 cut(s) | 444, 531 |
| BlnI | CCTAGG | 1 cut(s) | 769 |
| BlsI | GCNGC | 2 cut(s) | 445, 532 |
| Bme1390I | CCNGG | 2 cut(s) | 695, 1086 |
| Bme18I | GGWCC | 1 cut(s) | 427 |
| BmeT110I | CYCGRG | 1 cut(s) | 12 |
| BmgBI | CACGTC | 1 cut(s) | 499 |
| BmgT120I | GGNCC | 1 cut(s) | 427 |
| BmiI | GGNNCC | 1 cut(s) | 442 |
| BmrFI | CCNGG | 2 cut(s) | 695, 1086 |
| BmsI | GCATC | 1 cut(s) | 145 |
| BpiI | GAAGAC | 2 cut(s) | 740, 1169 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 289, 321 |
| BpuEI | CTTGAG | 1 cut(s) | 1130 |
| BpuMI | CCSGG | 1 cut(s) | 695 |
| BsaBI | GATNNNNATC | 1 cut(s) | 945 |
| BsaJI | CCNNGG | 1 cut(s) | 769 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 448, 478, 1080, 1110 |
| Bse1I | ACTGG | 1 cut(s) | 1045 |
| Bse8I | GATNNNNATC | 1 cut(s) | 945 |
| BseBI | CCWGG | 1 cut(s) | 1086 |
| BseDI | CCNNGG | 1 cut(s) | 769 |
| BseGI | GGATG | 4 cut(s) | 136, 411, 421, 505 |
| BseJI | GATNNNNATC | 1 cut(s) | 945 |
| BseMII | CTCAG | 4 cut(s) | 406, 858, 1071, 1127 |
| BseNI | ACTGG | 1 cut(s) | 1045 |
| BseRI | GAGGAG | 2 cut(s) | 231, 908 |
| BseXI | GCAGC | 1 cut(s) | 517 |
| BsiHKCI | CYCGRG | 1 cut(s) | 12 |
| BsiSI | CCGG | 2 cut(s) | 670, 695 |
| BsoBI | CYCGRG | 1 cut(s) | 12 |
| Bsp143I | GATC | 2 cut(s) | 877, 946 |
| BspACI | CCGC | 2 cut(s) | 444, 1124 |
| BspCNI | CTCAG | 4 cut(s) | 405, 857, 1072, 1128 |
| BspHI | TCATGA | 1 cut(s) | 307 |
| BspLI | GGNNCC | 1 cut(s) | 442 |
| BspMAI | CTGCAG | 1 cut(s) | 988 |
| BspQI | GCTCTTC | 1 cut(s) | 660 |
| BspTI | CTTAAG | 2 cut(s) | 863, 1199 |
| BsrI | ACTGG | 1 cut(s) | 1045 |
| BssECI | CCNNGG | 1 cut(s) | 769 |
| BssMI | GATC | 2 cut(s) | 877, 946 |
| BssT1I | CCWWGG | 1 cut(s) | 769 |
| Bst2UI | CCWGG | 1 cut(s) | 1086 |
| Bst6I | CTCTTC | 2 cut(s) | 660, 803 |
| BstAFI | CTTAAG | 2 cut(s) | 863, 1199 |
| BstDEI | CTNAG | 5 cut(s) | 392, 844, 910, 1080, 1136 |
| BstF5I | GGATG | 4 cut(s) | 136, 411, 421, 505 |
| BstKTI | GATC | 2 cut(s) | 880, 949 |
| BstMBI | GATC | 2 cut(s) | 877, 946 |
| BstNI | CCWGG | 1 cut(s) | 1086 |
| BstNSI | RCATGY | 1 cut(s) | 924 |
| BstSCI | CCNGG | 2 cut(s) | 693, 1084 |
| BstSFI | CTRYAG | 1 cut(s) | 984 |
| BstV1I | GCAGC | 1 cut(s) | 517 |
| BstV2I | GAAGAC | 2 cut(s) | 740, 1169 |
| BsuI | GTATCC | 1 cut(s) | 335 |
| BtrI | CACGTC | 1 cut(s) | 499 |
| BtsCI | GGATG | 4 cut(s) | 136, 411, 421, 505 |
| BtsIMutI | CAGTG | 1 cut(s) | 400 |
| CciI | TCATGA | 1 cut(s) | 307 |
| Cfr13I | GGNCC | 1 cut(s) | 427 |
| Csp6I | GTAC | 3 cut(s) | 85, 691, 860 |
| CviAII | CATG | 4 cut(s) | 308, 605, 921, 1022 |
| CviQI | GTAC | 3 cut(s) | 85, 691, 860 |
| DdeI | CTNAG | 5 cut(s) | 392, 844, 910, 1080, 1136 |
| DpnI | GATC | 2 cut(s) | 879, 948 |
| DpnII | GATC | 2 cut(s) | 877, 946 |
| DraI | TTTAAA | 1 cut(s) | 519 |
| Eam1104I | CTCTTC | 2 cut(s) | 660, 803 |
| EarI | CTCTTC | 2 cut(s) | 660, 803 |
| Eco130I | CCWWGG | 1 cut(s) | 769 |
| Eco47I | GGWCC | 1 cut(s) | 427 |
| Eco57I | CTGAAG | 3 cut(s) | 641, 1068, 1163 |
| Eco88I | CYCGRG | 1 cut(s) | 12 |
| EcoRI | GAATTC | 1 cut(s) | 721 |
| EcoRII | CCWGG | 1 cut(s) | 1084 |
| EcoT14I | CCWWGG | 1 cut(s) | 769 |
| ErhI | CCWWGG | 1 cut(s) | 769 |
| FaeI | CATG | 4 cut(s) | 311, 608, 924, 1025 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 890, 922, 936, 968 |
| FatI | CATG | 4 cut(s) | 307, 604, 920, 1021 |
| Fnu4HI | GCNGC | 2 cut(s) | 444, 531 |
| FokI | GGATG | 4 cut(s) | 123, 418, 428, 492 |
| Fsp4HI | GCNGC | 2 cut(s) | 444, 531 |
| FspBI | CTAG | 5 cut(s) | 368, 579, 755, 770, 827 |
| GluI | GCNGC | 2 cut(s) | 444, 531 |
| HapII | CCGG | 2 cut(s) | 670, 695 |
| Hin1II | CATG | 4 cut(s) | 311, 608, 924, 1025 |
| HincII | GTYRAC | 1 cut(s) | 373 |
| HindII | GTYRAC | 1 cut(s) | 373 |
| HindIII | AAGCTT | 1 cut(s) | 675 |
| HinfI | GANTC | 4 cut(s) | 179, 621, 811, 1205 |
| HpaI | GTTAAC | 1 cut(s) | 373 |
| HpaII | CCGG | 2 cut(s) | 670, 695 |
| HphI | GGTGA | 1 cut(s) | 1114 |
| Hpy166II | GTNNAC | 4 cut(s) | 126, 373, 824, 1162 |
| Hpy188I | TCNGA | 1 cut(s) | 847 |
| Hpy8I | GTNNAC | 4 cut(s) | 126, 373, 824, 1162 |
| HpyAV | CCTTC | 3 cut(s) | 338, 440, 1052 |
| HpyCH4IV | ACGT | 4 cut(s) | 165, 228, 498, 858 |
| HpyCH4V | TGCA | 7 cut(s) | 136, 190, 281, 533, 920, 986, 1072 |
| HpyF3I | CTNAG | 5 cut(s) | 392, 844, 910, 1080, 1136 |
| HpySE526I | ACGT | 4 cut(s) | 165, 228, 498, 858 |
| Hsp92II | CATG | 4 cut(s) | 311, 608, 924, 1025 |
| KspAI | GTTAAC | 1 cut(s) | 373 |
| Kzo9I | GATC | 2 cut(s) | 877, 946 |
| LguI | GCTCTTC | 1 cut(s) | 660 |
| LmnI | GCTCC | 2 cut(s) | 440, 773 |
| LpnPI | CCDG | 9 cut(s) | 36, 522, 616, 683, 708, 775, 1026, 1071, 1098 |
| Lsp1109I | GCAGC | 1 cut(s) | 517 |
| LweI | GCATC | 1 cut(s) | 145 |
| MaeI | CTAG | 5 cut(s) | 368, 579, 755, 770, 827 |
| MaeII | ACGT | 4 cut(s) | 165, 228, 498, 858 |
| MaeIII | GTNAC | 1 cut(s) | 839 |
| MalI | GATC | 2 cut(s) | 879, 948 |
| MboI | GATC | 2 cut(s) | 877, 946 |
| MfeI | CAATTG | 1 cut(s) | 69 |
| MlyI | GAGTC | 1 cut(s) | 820 |
| MmeI | TCCRAC | 1 cut(s) | 151 |
| MroXI | GAANNNNTTC | 3 cut(s) | 178, 654, 905 |
| MseI | TTAA | 7 cut(s) | 372, 518, 596, 864, 1028, 1152, 1200 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1067 |
| MspA1I | CMGCKG | 1 cut(s) | 1126 |
| MspCI | CTTAAG | 2 cut(s) | 863, 1199 |
| MspI | CCGG | 2 cut(s) | 670, 695 |
| MspR9I | CCNGG | 2 cut(s) | 695, 1086 |
| MunI | CAATTG | 1 cut(s) | 69 |
| MvaI | CCWGG | 1 cut(s) | 1086 |
| NciI | CCSGG | 1 cut(s) | 695 |
| NdeII | GATC | 2 cut(s) | 877, 946 |
| NlaIII | CATG | 4 cut(s) | 311, 608, 924, 1025 |
| NlaIV | GGNNCC | 1 cut(s) | 442 |
| NspI | RCATGY | 1 cut(s) | 924 |
| PaeR7I | CTCGAG | 1 cut(s) | 12 |
| PagI | TCATGA | 1 cut(s) | 307 |
| PciSI | GCTCTTC | 1 cut(s) | 660 |
| PdmI | GAANNNNTTC | 3 cut(s) | 178, 654, 905 |
| PfeI | GAWTC | 3 cut(s) | 179, 621, 1205 |
| PkrI | GCNGC | 2 cut(s) | 445, 532 |
| PleI | GAGTC | 1 cut(s) | 819 |
| PpsI | GAGTC | 1 cut(s) | 819 |
| PshBI | ATTAAT | 1 cut(s) | 1152 |
| PsiI | TTATAA | 1 cut(s) | 452 |
| Psp6I | CCWGG | 1 cut(s) | 1084 |
| PspGI | CCWGG | 1 cut(s) | 1084 |
| PspN4I | GGNNCC | 1 cut(s) | 442 |
| PspPI | GGNCC | 1 cut(s) | 427 |
| PstI | CTGCAG | 1 cut(s) | 988 |
| RsaI | GTAC | 3 cut(s) | 86, 692, 861 |
| RsaNI | GTAC | 3 cut(s) | 85, 691, 860 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1067 |
| SapI | GCTCTTC | 1 cut(s) | 660 |
| SaqAI | TTAA | 7 cut(s) | 372, 518, 596, 864, 1028, 1152, 1200 |
| SatI | GCNGC | 2 cut(s) | 444, 531 |
| Sau3AI | GATC | 2 cut(s) | 877, 946 |
| Sau96I | GGNCC | 1 cut(s) | 427 |
| SchI | GAGTC | 1 cut(s) | 820 |
| ScrFI | CCNGG | 2 cut(s) | 695, 1086 |
| SfaNI | GCATC | 1 cut(s) | 145 |
| SfcI | CTRYAG | 1 cut(s) | 984 |
| Sfr274I | CTCGAG | 1 cut(s) | 12 |
| SinI | GGWCC | 1 cut(s) | 427 |
| SlaI | CTCGAG | 1 cut(s) | 12 |
| SmiI | ATTTAAAT | 1 cut(s) | 519 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1067 |
| SmlI | CTYRAG | 4 cut(s) | 12, 863, 1145, 1199 |
| SmoI | CTYRAG | 4 cut(s) | 12, 863, 1145, 1199 |
| SsiI | CCGC | 2 cut(s) | 444, 1124 |
| SspMI | CTAG | 5 cut(s) | 368, 579, 755, 770, 827 |
| StyD4I | CCNGG | 2 cut(s) | 693, 1084 |
| StyI | CCWWGG | 1 cut(s) | 769 |
| SwaI | ATTTAAAT | 1 cut(s) | 519 |
| TaiI | ACGT | 4 cut(s) | 168, 231, 501, 861 |
| TaqI | TCGA | 4 cut(s) | 13, 719, 949, 1056 |
| TauI | GCSGC | 1 cut(s) | 446 |
| TfiI | GAWTC | 3 cut(s) | 179, 621, 1205 |
| Tru1I | TTAA | 7 cut(s) | 372, 518, 596, 864, 1028, 1152, 1200 |
| Tru9I | TTAA | 7 cut(s) | 372, 518, 596, 864, 1028, 1152, 1200 |
| TscAI | CASTG | 1 cut(s) | 400 |
| TseI | GCWGC | 1 cut(s) | 530 |
| TspDTI | ATGAA | 4 cut(s) | 324, 422, 422, 663 |
| TspGWI | ACGGA | 1 cut(s) | 804 |
| TspRI | CASTG | 1 cut(s) | 400 |
| Vha464I | CTTAAG | 2 cut(s) | 863, 1199 |
| VpaK11BI | GGWCC | 1 cut(s) | 427 |
| VspI | ATTAAT | 1 cut(s) | 1152 |
| XapI | RAATTY | 5 cut(s) | 20, 311, 520, 721, 849 |
| XceI | RCATGY | 1 cut(s) | 924 |
| XhoI | CTCGAG | 1 cut(s) | 12 |
| XmaJI | CCTAGG | 1 cut(s) | 769 |
| XmnI | GAANNNNTTC | 3 cut(s) | 178, 654, 905 |
| XspI | CTAG | 5 cut(s) | 368, 579, 755, 770, 827 |