Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 1096 |
| AccII | CGCG | 3 cut(s) | 191, 1025, 1032 |
| AciI | CCGC | 8 cut(s) | 191, 627, 1032, 1041, 1103, 1212, 1215, 1250 |
| AcoI | YGGCCR | 1 cut(s) | 792 |
| AcsI | RAATTY | 4 cut(s) | 180, 530, 812, 914 |
| AcuI | CTGAAG | 1 cut(s) | 1068 |
| AfaI | GTAC | 2 cut(s) | 377, 690 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 482 |
| AflIII | ACRYGT | 1 cut(s) | 691 |
| AgsI | TTSAA | 5 cut(s) | 187, 217, 275, 530, 785 |
| AjnI | CCWGG | 4 cut(s) | 56, 157, 610, 874 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 533, 565 |
| AluBI | AGCT | 4 cut(s) | 141, 152, 467, 1260 |
| AluI | AGCT | 4 cut(s) | 141, 152, 467, 1260 |
| Alw26I | GTCTC | 1 cut(s) | 1115 |
| AoxI | GGCC | 2 cut(s) | 586, 792 |
| ApeKI | GCWGC | 3 cut(s) | 221, 960, 1209 |
| ApoI | RAATTY | 4 cut(s) | 180, 530, 812, 914 |
| AspLEI | GCGC | 3 cut(s) | 715, 1032, 1097 |
| AspS9I | GGNCC | 5 cut(s) | 54, 193, 587, 624, 863 |
| AsuHPI | GGTGA | 1 cut(s) | 1031 |
| AsuII | TTCGAA | 3 cut(s) | 500, 729, 912 |
| AvaII | GGWCC | 4 cut(s) | 54, 193, 624, 863 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 994, 1027 |
| BanII | GRGCYC | 1 cut(s) | 325 |
| BbsI | GAAGAC | 3 cut(s) | 282, 429, 509 |
| BbvCI | CCTCAGC | 1 cut(s) | 835 |
| BbvI | GCAGC | 3 cut(s) | 233, 947, 1221 |
| BccI | CCATC | 4 cut(s) | 233, 311, 1124, 1212 |
| BceAI | ACGGC | 1 cut(s) | 1077 |
| BciT130I | CCWGG | 4 cut(s) | 58, 159, 612, 876 |
| BciVI | GTATCC | 2 cut(s) | 341, 995 |
| BcoDI | GTCTC | 1 cut(s) | 1115 |
| BfaI | CTAG | 3 cut(s) | 384, 1038, 1176 |
| BfuI | GTATCC | 2 cut(s) | 341, 995 |
| BisI | GCNGC | 5 cut(s) | 222, 961, 1033, 1210, 1213 |
| BlsI | GCNGC | 5 cut(s) | 223, 962, 1034, 1211, 1214 |
| Bme1390I | CCNGG | 4 cut(s) | 58, 159, 612, 876 |
| Bme18I | GGWCC | 4 cut(s) | 54, 193, 624, 863 |
| BmgT120I | GGNCC | 5 cut(s) | 54, 193, 587, 624, 863 |
| BmiI | GGNNCC | 5 cut(s) | 55, 176, 285, 322, 589 |
| BmrFI | CCNGG | 4 cut(s) | 58, 159, 612, 876 |
| BmsI | GCATC | 4 cut(s) | 224, 398, 730, 1073 |
| BpiI | GAAGAC | 3 cut(s) | 282, 429, 509 |
| Bpu10I | CCTNAGC | 2 cut(s) | 197, 835 |
| Bpu14I | TTCGAA | 3 cut(s) | 500, 729, 912 |
| BpuEI | CTTGAG | 1 cut(s) | 320 |
| Bsa29I | ATCGAT | 1 cut(s) | 315 |
| BsaBI | GATNNNNATC | 1 cut(s) | 660 |
| BsaI | GGTCTC | 1 cut(s) | 1115 |
| BsaJI | CCNNGG | 4 cut(s) | 229, 325, 610, 1233 |
| BsaWI | WCCGGW | 1 cut(s) | 262 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1035, 1065, 1141, 1171 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 482 |
| Bse8I | GATNNNNATC | 1 cut(s) | 660 |
| BseBI | CCWGG | 4 cut(s) | 58, 159, 612, 876 |
| BseCI | ATCGAT | 1 cut(s) | 315 |
| BseDI | CCNNGG | 4 cut(s) | 229, 325, 610, 1233 |
| BseGI | GGATG | 8 cut(s) | 225, 239, 421, 436, 661, 703, 1064, 1223 |
| BseJI | GATNNNNATC | 1 cut(s) | 660 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 482 |
| BseMII | CTCAG | 3 cut(s) | 59, 849, 1091 |
| BseRI | GAGGAG | 1 cut(s) | 1165 |
| BseXI | GCAGC | 3 cut(s) | 233, 947, 1221 |
| BseYI | CCCAGC | 1 cut(s) | 1241 |
| Bsh1236I | CGCG | 3 cut(s) | 191, 1025, 1032 |
| BshFI | GGCC | 2 cut(s) | 588, 794 |
| BshVI | ATCGAT | 1 cut(s) | 315 |
| BsiSI | CCGG | 1 cut(s) | 263 |
| BslFI | GGGAC | 1 cut(s) | 585 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 482 |
| BsmAI | GTCTC | 1 cut(s) | 1115 |
| BsmFI | GGGAC | 1 cut(s) | 585 |
| BsnI | GGCC | 2 cut(s) | 588, 794 |
| Bso31I | GGTCTC | 1 cut(s) | 1115 |
| Bsp119I | TTCGAA | 3 cut(s) | 500, 729, 912 |
| Bsp1286I | GDGCHC | 1 cut(s) | 325 |
| Bsp1407I | TGTACA | 1 cut(s) | 375 |
| Bsp143I | GATC | 3 cut(s) | 110, 308, 1270 |
| Bsp19I | CCATGG | 1 cut(s) | 1233 |
| BspACI | CCGC | 8 cut(s) | 191, 627, 1032, 1041, 1103, 1212, 1215, 1250 |
| BspANI | GGCC | 2 cut(s) | 588, 794 |
| BspCNI | CTCAG | 3 cut(s) | 60, 848, 1090 |
| BspDI | ATCGAT | 1 cut(s) | 315 |
| BspFNI | CGCG | 3 cut(s) | 191, 1025, 1032 |
| BspHI | TCATGA | 1 cut(s) | 736 |
| BspLI | GGNNCC | 5 cut(s) | 55, 176, 285, 322, 589 |
| BspT104I | TTCGAA | 3 cut(s) | 500, 729, 912 |
| BspTNI | GGTCTC | 1 cut(s) | 1115 |
| BsrGI | TGTACA | 1 cut(s) | 375 |
| BssECI | CCNNGG | 4 cut(s) | 229, 325, 610, 1233 |
| BssMI | GATC | 3 cut(s) | 110, 308, 1270 |
| BssT1I | CCWWGG | 3 cut(s) | 229, 325, 1233 |
| Bst2UI | CCWGG | 4 cut(s) | 58, 159, 612, 876 |
| Bst4CI | ACNGT | 4 cut(s) | 106, 361, 565, 1092 |
| Bst6I | CTCTTC | 1 cut(s) | 1118 |
| BstAUI | TGTACA | 1 cut(s) | 375 |
| BstBI | TTCGAA | 3 cut(s) | 500, 729, 912 |
| BstC8I | GCNNGC | 2 cut(s) | 343, 1162 |
| BstDEI | CTNAG | 5 cut(s) | 68, 197, 835, 867, 1077 |
| BstDSI | CCRYGG | 1 cut(s) | 1233 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 480 |
| BstF5I | GGATG | 8 cut(s) | 225, 239, 421, 436, 661, 703, 1064, 1223 |
| BstFNI | CGCG | 3 cut(s) | 191, 1025, 1032 |
| BstHHI | GCGC | 3 cut(s) | 715, 1032, 1097 |
| BstKTI | GATC | 3 cut(s) | 113, 311, 1273 |
| BstMAI | GTCTC | 1 cut(s) | 1115 |
| BstMBI | GATC | 3 cut(s) | 110, 308, 1270 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 79, 1038, 1061, 1206, 1247 |
| BstNI | CCWGG | 4 cut(s) | 58, 159, 612, 876 |
| BstNSI | RCATGY | 1 cut(s) | 695 |
| BstSCI | CCNGG | 4 cut(s) | 56, 157, 610, 874 |
| BstUI | CGCG | 3 cut(s) | 191, 1025, 1032 |
| BstV1I | GCAGC | 3 cut(s) | 233, 947, 1221 |
| BstV2I | GAAGAC | 3 cut(s) | 282, 429, 509 |
| BstX2I | RGATCY | 1 cut(s) | 1270 |
| BstYI | RGATCY | 1 cut(s) | 1270 |
| Bsu15I | ATCGAT | 1 cut(s) | 315 |
| BsuI | GTATCC | 2 cut(s) | 341, 995 |
| BsuRI | GGCC | 2 cut(s) | 588, 794 |
| BsuTUI | ATCGAT | 1 cut(s) | 315 |
| BtgI | CCRYGG | 1 cut(s) | 1233 |
| BtsCI | GGATG | 8 cut(s) | 225, 239, 421, 436, 661, 703, 1064, 1223 |
| BtsI | GCAGTG | 2 cut(s) | 303, 955 |
| BtsIMutI | CAGTG | 5 cut(s) | 303, 366, 690, 949, 955 |
| Cac8I | GCNNGC | 2 cut(s) | 343, 1162 |
| CciI | TCATGA | 1 cut(s) | 736 |
| CfoI | GCGC | 3 cut(s) | 715, 1032, 1097 |
| Cfr13I | GGNCC | 5 cut(s) | 54, 193, 587, 624, 863 |
| ClaI | ATCGAT | 1 cut(s) | 315 |
| CpoI | CGGWCCG | 1 cut(s) | 624 |
| CseI | GACGC | 2 cut(s) | 226, 1031 |
| Csp6I | GTAC | 2 cut(s) | 376, 689 |
| CspI | CGGWCCG | 1 cut(s) | 624 |
| CviAII | CATG | 8 cut(s) | 251, 427, 493, 692, 737, 1069, 1187, 1234 |
| CviQI | GTAC | 2 cut(s) | 376, 689 |
| DdeI | CTNAG | 5 cut(s) | 68, 197, 835, 867, 1077 |
| DpnI | GATC | 3 cut(s) | 112, 310, 1272 |
| DpnII | GATC | 3 cut(s) | 110, 308, 1270 |
| DraI | TTTAAA | 1 cut(s) | 471 |
| EaeI | YGGCCR | 1 cut(s) | 792 |
| Eam1104I | CTCTTC | 1 cut(s) | 1118 |
| EarI | CTCTTC | 1 cut(s) | 1118 |
| EciI | GGCGGA | 2 cut(s) | 1118, 1230 |
| Eco130I | CCWWGG | 3 cut(s) | 229, 325, 1233 |
| Eco24I | GRGCYC | 1 cut(s) | 325 |
| Eco31I | GGTCTC | 1 cut(s) | 1115 |
| Eco47I | GGWCC | 4 cut(s) | 54, 193, 624, 863 |
| Eco57I | CTGAAG | 1 cut(s) | 1068 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 480 |
| EcoO109I | RGGNCCY | 2 cut(s) | 54, 863 |
| EcoRII | CCWGG | 4 cut(s) | 56, 157, 610, 874 |
| EcoT14I | CCWWGG | 3 cut(s) | 229, 325, 1233 |
| EcoT38I | GRGCYC | 1 cut(s) | 325 |
| ErhI | CCWWGG | 3 cut(s) | 229, 325, 1233 |
| FaeI | CATG | 8 cut(s) | 254, 430, 496, 695, 740, 1072, 1190, 1237 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 329, 361, 881, 913 |
| FaqI | GGGAC | 1 cut(s) | 585 |
| FatI | CATG | 8 cut(s) | 250, 426, 492, 691, 736, 1068, 1186, 1233 |
| Fnu4HI | GCNGC | 5 cut(s) | 222, 961, 1033, 1210, 1213 |
| FokI | GGATG | 8 cut(s) | 212, 246, 428, 443, 668, 710, 1051, 1230 |
| FriOI | GRGCYC | 1 cut(s) | 325 |
| Fsp4HI | GCNGC | 5 cut(s) | 222, 961, 1033, 1210, 1213 |
| FspAI | RTGCGCAY | 1 cut(s) | 1096 |
| FspBI | CTAG | 3 cut(s) | 384, 1038, 1176 |
| FspI | TGCGCA | 1 cut(s) | 1096 |
| GlaI | GCGC | 3 cut(s) | 714, 1031, 1096 |
| GluI | GCNGC | 5 cut(s) | 222, 961, 1033, 1210, 1213 |
| GsaI | CCCAGC | 1 cut(s) | 1245 |
| HaeIII | GGCC | 2 cut(s) | 588, 794 |
| HapII | CCGG | 1 cut(s) | 263 |
| HgaI | GACGC | 2 cut(s) | 226, 1031 |
| HhaI | GCGC | 3 cut(s) | 715, 1032, 1097 |
| Hin1II | CATG | 8 cut(s) | 254, 430, 496, 695, 740, 1072, 1190, 1237 |
| Hin6I | GCGC | 3 cut(s) | 713, 1030, 1095 |
| HinP1I | GCGC | 3 cut(s) | 713, 1030, 1095 |
| HincII | GTYRAC | 1 cut(s) | 268 |
| HindII | GTYRAC | 1 cut(s) | 268 |
| HindIII | AAGCTT | 2 cut(s) | 139, 465 |
| HinfI | GANTC | 4 cut(s) | 64, 842, 902, 1119 |
| HpaII | CCGG | 1 cut(s) | 263 |
| HphI | GGTGA | 1 cut(s) | 1031 |
| Hpy166II | GTNNAC | 3 cut(s) | 268, 376, 378 |
| Hpy188I | TCNGA | 8 cut(s) | 69, 115, 242, 538, 624, 1001, 1087, 1118 |
| Hpy188III | TCNNGA | 2 cut(s) | 527, 737 |
| Hpy8I | GTNNAC | 3 cut(s) | 268, 376, 378 |
| Hpy99I | CGWCG | 4 cut(s) | 242, 1060, 1063, 1208 |
| HpyAV | CCTTC | 4 cut(s) | 582, 601, 964, 980 |
| HpyCH4III | ACNGT | 4 cut(s) | 106, 361, 565, 1092 |
| HpyCH4V | TGCA | 7 cut(s) | 221, 353, 389, 401, 743, 826, 963 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 79, 1038, 1061, 1206, 1247 |
| HpyF3I | CTNAG | 5 cut(s) | 68, 197, 835, 867, 1077 |
| Hsp92II | CATG | 8 cut(s) | 254, 430, 496, 695, 740, 1072, 1190, 1237 |
| HspAI | GCGC | 3 cut(s) | 713, 1030, 1095 |
| Kzo9I | GATC | 3 cut(s) | 110, 308, 1270 |
| LmnI | GCTCC | 4 cut(s) | 161, 180, 320, 1257 |
| Lsp1109I | GCAGC | 3 cut(s) | 233, 947, 1221 |
| LweI | GCATC | 4 cut(s) | 224, 398, 730, 1073 |
| MaeI | CTAG | 3 cut(s) | 384, 1038, 1176 |
| MaeIII | GTNAC | 6 cut(s) | 28, 86, 298, 446, 559, 1019 |
| MalI | GATC | 3 cut(s) | 112, 310, 1272 |
| MboI | GATC | 3 cut(s) | 110, 308, 1270 |
| MboII | GAAGA | 7 cut(s) | 179, 287, 434, 514, 797, 1105, 1219 |
| MfeI | CAATTG | 2 cut(s) | 757, 780 |
| MflI | RGATCY | 1 cut(s) | 1270 |
| MhlI | GDGCHC | 1 cut(s) | 325 |
| MluCI | AATT | 9 cut(s) | 180, 530, 567, 757, 780, 812, 821, 914, 951 |
| MlyI | GAGTC | 1 cut(s) | 851 |
| MmeI | TCCRAC | 2 cut(s) | 220, 1127 |
| MseI | TTAA | 5 cut(s) | 462, 470, 848, 858, 918 |
| MslI | CAYNNNNRTG | 3 cut(s) | 696, 738, 1169 |
| MspA1I | CMGCKG | 1 cut(s) | 1212 |
| MspI | CCGG | 1 cut(s) | 263 |
| MspR9I | CCNGG | 4 cut(s) | 58, 159, 612, 876 |
| MunI | CAATTG | 2 cut(s) | 757, 780 |
| MvaI | CCWGG | 4 cut(s) | 58, 159, 612, 876 |
| MvnI | CGCG | 3 cut(s) | 191, 1025, 1032 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 79, 1038, 1061, 1206, 1247 |
| NcoI | CCATGG | 1 cut(s) | 1233 |
| NdeII | GATC | 3 cut(s) | 110, 308, 1270 |
| NlaIII | CATG | 8 cut(s) | 254, 430, 496, 695, 740, 1072, 1190, 1237 |
| NlaIV | GGNNCC | 5 cut(s) | 55, 176, 285, 322, 589 |
| NmeAIII | GCCGAG | 1 cut(s) | 820 |
| NmuCI | GTSAC | 4 cut(s) | 298, 446, 559, 1019 |
| NsbI | TGCGCA | 1 cut(s) | 1096 |
| NspI | RCATGY | 1 cut(s) | 695 |
| NspV | TTCGAA | 3 cut(s) | 500, 729, 912 |
| PagI | TCATGA | 1 cut(s) | 736 |
| PciI | ACATGT | 1 cut(s) | 691 |
| PfeI | GAWTC | 3 cut(s) | 64, 902, 1119 |
| PkrI | GCNGC | 5 cut(s) | 223, 962, 1034, 1211, 1214 |
| PleI | GAGTC | 1 cut(s) | 850 |
| PpsI | GAGTC | 1 cut(s) | 850 |
| PpuMI | RGGWCCY | 2 cut(s) | 54, 863 |
| PscI | ACATGT | 1 cut(s) | 691 |
| Psp5II | RGGWCCY | 2 cut(s) | 54, 863 |
| Psp6I | CCWGG | 4 cut(s) | 56, 157, 610, 874 |
| PspFI | CCCAGC | 1 cut(s) | 1241 |
| PspGI | CCWGG | 4 cut(s) | 56, 157, 610, 874 |
| PspN4I | GGNNCC | 5 cut(s) | 55, 176, 285, 322, 589 |
| PspPI | GGNCC | 5 cut(s) | 54, 193, 587, 624, 863 |
| PspPPI | RGGWCCY | 2 cut(s) | 54, 863 |
| PsuI | RGATCY | 1 cut(s) | 1270 |
| RsaI | GTAC | 2 cut(s) | 377, 690 |
| RsaNI | GTAC | 2 cut(s) | 376, 689 |
| RseI | CAYNNNNRTG | 3 cut(s) | 696, 738, 1169 |
| Rsr2I | CGGWCCG | 1 cut(s) | 624 |
| RsrII | CGGWCCG | 1 cut(s) | 624 |
| SaqAI | TTAA | 5 cut(s) | 462, 470, 848, 858, 918 |
| SatI | GCNGC | 5 cut(s) | 222, 961, 1033, 1210, 1213 |
| Sau3AI | GATC | 3 cut(s) | 110, 308, 1270 |
| Sau96I | GGNCC | 5 cut(s) | 54, 193, 587, 624, 863 |
| SchI | GAGTC | 1 cut(s) | 851 |
| ScrFI | CCNGG | 4 cut(s) | 58, 159, 612, 876 |
| SduI | GDGCHC | 1 cut(s) | 325 |
| SfaNI | GCATC | 4 cut(s) | 224, 398, 730, 1073 |
| SfuI | TTCGAA | 3 cut(s) | 500, 729, 912 |
| SinI | GGWCC | 4 cut(s) | 54, 193, 624, 863 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 696, 738, 1169 |
| SmlI | CTYRAG | 1 cut(s) | 335 |
| SmoI | CTYRAG | 1 cut(s) | 335 |
| Sse9I | AATT | 9 cut(s) | 180, 530, 567, 757, 780, 812, 821, 914, 951 |
| SsiI | CCGC | 8 cut(s) | 191, 627, 1032, 1041, 1103, 1212, 1215, 1250 |
| SspMI | CTAG | 3 cut(s) | 384, 1038, 1176 |
| StyD4I | CCNGG | 4 cut(s) | 56, 157, 610, 874 |
| StyI | CCWWGG | 3 cut(s) | 229, 325, 1233 |
| TaaI | ACNGT | 4 cut(s) | 106, 361, 565, 1092 |
| TaqI | TCGA | 7 cut(s) | 315, 500, 729, 819, 912, 984, 1128 |
| TasI | AATT | 9 cut(s) | 180, 530, 567, 757, 780, 812, 821, 914, 951 |
| TatI | WGTACW | 1 cut(s) | 375 |
| TauI | GCSGC | 2 cut(s) | 1035, 1215 |
| TfiI | GAWTC | 3 cut(s) | 64, 902, 1119 |
| Tru1I | TTAA | 5 cut(s) | 462, 470, 848, 858, 918 |
| Tru9I | TTAA | 5 cut(s) | 462, 470, 848, 858, 918 |
| TscAI | CASTG | 5 cut(s) | 303, 366, 690, 949, 962 |
| TseFI | GTSAC | 4 cut(s) | 298, 446, 559, 1019 |
| TseI | GCWGC | 3 cut(s) | 221, 960, 1209 |
| Tsp45I | GTSAC | 4 cut(s) | 298, 446, 559, 1019 |
| TspDTI | ATGAA | 4 cut(s) | 37, 583, 672, 1175 |
| TspRI | CASTG | 5 cut(s) | 303, 366, 690, 949, 962 |
| VpaK11BI | GGWCC | 4 cut(s) | 54, 193, 624, 863 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 480 |
| XapI | RAATTY | 4 cut(s) | 180, 530, 812, 914 |
| XceI | RCATGY | 1 cut(s) | 695 |
| XspI | CTAG | 3 cut(s) | 384, 1038, 1176 |