MD05G1308000.v1.1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000510
Physical Location & Seq
Forward (+)
43930469 .. 43931848
1380 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1308000.v1.1.491

Sequence Viewer

Length: 1380 bp
ATGGGGGACAAGAAACTTCACGTTGCCATGTATCCTTGGTTTGCAATGGGGCACCTGATCGCATTCCTCCACACCTGCAACAAATTAGCTGAGAGAGGCCACAGAATCTCCTTCTTTGTCCCCGTCCAAACCCTACAAAAGTTACAGGCTTTTAATCTCTACCCGGATCGCATTGCCTTCATCCCCATCAATGTCCCTCACGTTGACGGCCTTCCCCCGGGCACTGAAACCACAACTGACGTTCCTTTCCCCCTGCACTCGCTCCTCATGACCGCCATGGACCTCACCCGGCCTGCAGTTGGACAAGCCCTCAGGGAACTCAAGCCCGATTTTGTTTTCTTTGACTTCACGCATTGGATGCCGGAGTTGTTACATGAGCTTGATATGGGCATTAAGTCCATACATTACTGCATAATTAGTCCTGCAACTATCGGGTACCTGTCAACCCCCGAAAGAAATCCGACGGAGAAACTGCCAACGGCTGCTGACCTTATGCTGCCTCCGCCATCTTTCCCTGCATCATCGATTACCCTACGAACGCACGAAGCTCGTGGGCTTGTAGCTGTCTTGTTGAAGGAATTCGGCCGTGGAATGACATTCATGCAACGCCAATTTCTTTCTTTTAGTGGATGTGATGCTATTGCTTTCAAAACTTGTAGAGAGATGGAAGGGCCCTATAGCGATTATATCGAAACCCAATATAAGAAGCCGGTGATTCTCGCAGGGTCGGTGGTGCCAGAGACCTCAACTACAGAGTTGGACGAGAAATGGGCAAAATGGCTTGAAGGGTTCGAGGCCAAAAGCATGATTTACTGCGCGTTTGGAAGCGAATGCATTCTGAAAATTGATCAGTTTCAAGAATTGTTGTTGGGCTTTGAGCTCACAGGTTTACCTTTCTTCGCAGCGTTGAAGCCGCCTATGGGAGCTGAATCGATCGAGTCAGCATTGCCGGAAGGGTTTGAGGAGAGGACACGAGGAAGAGGCGTTGTTTACGGGGGTTGGGTTCAGCAGCCATTATTCTTGAGGCACCCTTCTGTGGGGTGCTTTGTGACCCATTGCGGCTCAGGGTCTTTGTCCGAGGCGCTAGTGAATGAGTGCCAACTGGTGCTGCTGCCGAATGTTGGGGATCAGATCATCAATGCGCGAATGATGGGCTGCGATCTGAAGGTTGGAGTGGAAGTGGAGAAACGAGACTTAGACGGGCTGTTCACGAAGGAGGGTGTTGCCAAGGCAGTGGAAGCTGTGATGGAGGATGGCGGTGAGTTAGCCGAGGAGGTGAGGAGCAACCATGCAAAATGGAGGGAATTTTTCTCCGGCCAAGGGCTTGGTAACTCTTATTTGGACAGTTTCGAACAAAAGCTGCATAAACTGCTTGAATGA

Protein Analysis

460

Amino Acids

51.23

Weight (kDa)

5.46

Isoelectric Point (pI)

37.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 333 - 418 1.1e-11 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000510)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g08341 FvH4_3g08360 FvH4_3g13460 FvH4_5g23070 FvH4_6g03920 FvH4_7g24190
malus_domestica MD05G1307700.v1.1 MD05G1307800.v1.1 MD05G1307900.v1.1 MD05G1308000.v1.1 MD10G1286900.v1.1 MD10G1287000.v1.1 MD10G1287100.v1.1
prunus_persica Prupe.4G054800_v2.0.a1
pyrus_communis pycom05g28450 pycom05g28470 pycom10g23980 pycom10g24010
rosa_chinensis RchiOBHm_Chr3g0452471 RchiOBHm_Chr5g0009541 RchiOBHm_Chr5g0009571 RchiOBHm_Chr5g0009591 RchiOBHm_Chr5g0009631 RchiOBHm_Chr5g0009641
rosa_laevigata RLG00000025599 RLG00000031670 RLG00000031671 RLG00000031673 RLG00000031674 RLG00000031676 RLG00000031677
rosa_multiflora Rmu_co8094034.1_g000001 Rmu_co8292439.1_g000001 Rmu_co8399121.1_g000001 Rmu_co8467919.1_g000001 Rmu_sc0002711.1_g000003 Rmu_sc0002711.1_g000007 Rmu_sc0006311.1_g000004 Rmu_sc0006311.1_g000008 Rmu_sc0011680.1_g000005 Rmu_sc0025450.1_g000001 Rmu_sc0025487.1_g000001 Rmu_sc0034739.1_g000001 Rmu_sc0034740.1_g000001 Rmu_sc0036612.1_g000001 Rmu_sc0036650.1_g000001
rosa_roxburghii Rroxscaffold_1G00066560 Rroxscaffold_1G00066570 Rroxscaffold_1G00066590 Rroxscaffold_1G00067280 Rroxscaffold_1G00067290 Rroxscaffold_6G00429480 Rroxscaffold_6G00429490
rosa_rugosa Rorug02G0641100 Rorug02G0641200 Rorug04G0444300 Rorug04G0444400 Rorug04G0444500
rosa_samantha Rh3AG042900 Rh3BG044600 Rh3CG043200 Rh3DG044000 Rh4DG097500 Rh4DG250600 Rh5AG075400 Rh5AG075700 Rh5AG076000 Rh5AG076100 Rh5BG070900 Rh5BG071000 Rh5BG071100 Rh5BG071200 Rh5CG083100 Rh5CG083600 Rh5CG083700 Rh5CG083800 Rh5DG070900 Rh5DG071400 Rh5DG071500 Rh5DG071600 Rh5DG071700 Rh5DG071800
rosa_wichuraiana Rw3G003320 Rw5G006950 Rw5G006980 Rw5G006990 Rw5G007000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 83
Acc36I ACCTGC 1 cut(s) 83
Acc65I GGTACC 1 cut(s) 435
AccB1I GGYRCC 4 cut(s) 51, 435, 733, 1026
AccII CGCG 2 cut(s) 818, 1144
AciI CCGC 5 cut(s) 273, 503, 914, 1059, 1257
AclWI GGATC 2 cut(s) 174, 1134
AcoI YGGCCR 2 cut(s) 583, 1315
AcsI RAATTY 2 cut(s) 578, 1304
AcuI CTGAAG 1 cut(s) 1184
AfaI GTAC 1 cut(s) 437
AfiI CCNNNNNNNGG 7 cut(s) 217, 299, 920, 1036, 1037, 1121, 1320
AgsI TTSAA 6 cut(s) 574, 649, 785, 857, 910, 1376
AluBI AGCT 8 cut(s) 89, 379, 548, 563, 880, 926, 1241, 1360
AluI AGCT 8 cut(s) 89, 379, 548, 563, 880, 926, 1241, 1360
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 2 cut(s) 734, 1185
AlwI GGATC 2 cut(s) 174, 1134
Ama87I CYCGRG 1 cut(s) 217
AoxI GGCC 7 cut(s) 97, 208, 290, 583, 671, 795, 1315
ApaI GGGCCC 1 cut(s) 675
ApeKI GCWGC 8 cut(s) 482, 496, 902, 1009, 1108, 1111, 1155, 1360
ApoI RAATTY 2 cut(s) 578, 1304
Asp700I GAANNNNTTC 2 cut(s) 578, 834
Asp718I GGTACC 1 cut(s) 435
AspLEI GCGC 3 cut(s) 818, 1084, 1144
AspS9I GGNCC 3 cut(s) 280, 671, 672
AsuC2I CCSGG 4 cut(s) 164, 218, 219, 289
AsuHPI GGTGA 4 cut(s) 277, 724, 1271, 1288
AsuII TTCGAA 1 cut(s) 1350
AvaI CYCGRG 1 cut(s) 217
AvaII GGWCC 1 cut(s) 280
AxyI CCTNAGG 1 cut(s) 311
BaeGI GKGCMC 3 cut(s) 54, 224, 675
BanI GGYRCC 4 cut(s) 51, 435, 733, 1026
BanII GRGCYC 2 cut(s) 675, 882
BauI CACGAG 2 cut(s) 549, 972
Bbv12I GWGCWC 1 cut(s) 882
BbvI GCAGC 8 cut(s) 469, 483, 914, 1021, 1095, 1098, 1142, 1347
BccI CCATC 6 cut(s) 194, 514, 658, 1144, 1240, 1247
BceAI ACGGC 3 cut(s) 223, 495, 570
BcgI CGANNNNNNTGC 2 cut(s) 530, 564
BciVI GTATCC 1 cut(s) 42
BclI TGATCA 1 cut(s) 847
BcnI CCSGG 4 cut(s) 164, 218, 219, 289
BcoDI GTCTC 2 cut(s) 734, 1185
BfaI CTAG 1 cut(s) 1085
BfmI CTRYAG 3 cut(s) 294, 676, 750
BfoI RGCGCY 1 cut(s) 1085
BfuAI ACCTGC 1 cut(s) 83
BfuI GTATCC 1 cut(s) 42
Bme1390I CCNGG 4 cut(s) 164, 218, 219, 289
Bme18I GGWCC 1 cut(s) 280
BmeT110I CYCGRG 1 cut(s) 217
BmgT120I GGNCC 3 cut(s) 280, 671, 672
BmiI GGNNCC 5 cut(s) 53, 437, 673, 735, 1028
BmrFI CCNGG 4 cut(s) 164, 218, 219, 289
BmsI GCATC 3 cut(s) 348, 527, 625
Bpu10I CCTNAGC 1 cut(s) 1063
Bpu14I TTCGAA 1 cut(s) 1350
BpuEI CTTGAG 2 cut(s) 305, 1042
BpuMI CCSGG 4 cut(s) 164, 218, 219, 289
Bsa29I ATCGAT 2 cut(s) 524, 932
BsaI GGTCTC 1 cut(s) 734
BsaJI CCNNGG 9 cut(s) 35, 216, 217, 276, 586, 1077, 1227, 1269, 1318
BsaXI ACNNNNNCTCC 4 cut(s) 92, 122, 1164, 1194
Bsc4I CCNNNNNNNGG 7 cut(s) 217, 299, 920, 1036, 1037, 1121, 1320
Bse118I RCCGGY 1 cut(s) 709
Bse1I ACTGG 1 cut(s) 1107
Bse21I CCTNAGG 1 cut(s) 311
Bse3DI GCAATG 4 cut(s) 51, 171, 944, 1054
BseCI ATCGAT 2 cut(s) 524, 932
BseDI CCNNGG 9 cut(s) 35, 216, 217, 276, 586, 1077, 1227, 1269, 1318
BseGI GGATG 4 cut(s) 180, 363, 635, 1258
BseLI CCNNNNNNNGG 7 cut(s) 217, 299, 920, 1036, 1037, 1121, 1320
BseMI GCAATG 4 cut(s) 51, 171, 944, 1054
BseMII CTCAG 3 cut(s) 81, 325, 1077
BseNI ACTGG 1 cut(s) 1107
BseRI GAGGAG 4 cut(s) 254, 977, 1286, 1294
BseSI GKGCMC 3 cut(s) 54, 224, 675
BseX3I CGGCCG 1 cut(s) 583
BseXI GCAGC 8 cut(s) 469, 483, 914, 1021, 1095, 1098, 1142, 1347
BsgI GTGCAG 1 cut(s) 239
Bsh1236I CGCG 2 cut(s) 818, 1144
Bsh1285I CGRYCG 2 cut(s) 586, 936
BshFI GGCC 7 cut(s) 99, 210, 292, 585, 673, 797, 1317
BshNI GGYRCC 4 cut(s) 51, 435, 733, 1026
BshVI ATCGAT 2 cut(s) 524, 932
BsiEI CGRYCG 2 cut(s) 586, 936
BsiHKAI GWGCWC 1 cut(s) 882
BsiHKCI CYCGRG 1 cut(s) 217
BsiSI CCGG 7 cut(s) 164, 218, 289, 362, 710, 950, 1314
BslFI GGGAC 3 cut(s) 20, 104, 179
BslI CCNNNNNNNGG 7 cut(s) 217, 299, 920, 1036, 1037, 1121, 1320
BsmAI GTCTC 2 cut(s) 734, 1185
BsmFI GGGAC 3 cut(s) 20, 104, 179
BsmI GAATGC 3 cut(s) 62, 834, 836
BsnI GGCC 7 cut(s) 99, 210, 292, 585, 673, 797, 1317
Bso31I GGTCTC 1 cut(s) 734
BsoBI CYCGRG 1 cut(s) 217
Bsp119I TTCGAA 1 cut(s) 1350
Bsp120I GGGCCC 1 cut(s) 671
Bsp1286I GDGCHC 4 cut(s) 54, 224, 675, 882
Bsp143I GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
Bsp19I CCATGG 1 cut(s) 276
BspACI CCGC 5 cut(s) 273, 503, 914, 1059, 1257
BspANI GGCC 7 cut(s) 99, 210, 292, 585, 673, 797, 1317
BspCNI CTCAG 3 cut(s) 82, 324, 1076
BspDI ATCGAT 2 cut(s) 524, 932
BspFNI CGCG 2 cut(s) 818, 1144
BspHI TCATGA 1 cut(s) 267
BspLI GGNNCC 5 cut(s) 53, 437, 673, 735, 1028
BspMAI CTGCAG 1 cut(s) 298
BspMI ACCTGC 1 cut(s) 83
BspPI GGATC 2 cut(s) 174, 1134
BspT104I TTCGAA 1 cut(s) 1350
BspT107I GGYRCC 4 cut(s) 51, 435, 733, 1026
BspTNI GGTCTC 1 cut(s) 734
BsrDI GCAATG 4 cut(s) 51, 171, 944, 1054
BsrFI RCCGGY 1 cut(s) 709
BsrI ACTGG 1 cut(s) 1107
BssAI RCCGGY 1 cut(s) 709
BssECI CCNNGG 9 cut(s) 35, 216, 217, 276, 586, 1077, 1227, 1269, 1318
BssMI GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
BssSI CACGAG 2 cut(s) 549, 972
BssT1I CCWWGG 4 cut(s) 35, 276, 1227, 1318
Bst2BI CACGAG 2 cut(s) 549, 972
Bst4CI ACNGT 1 cut(s) 1346
Bst6I CTCTTC 1 cut(s) 973
BstAPI GCANNNNNTGC 2 cut(s) 358, 1369
BstBI TTCGAA 1 cut(s) 1350
BstC8I GCNNGC 1 cut(s) 294
BstDEI CTNAG 4 cut(s) 90, 311, 1063, 1195
BstDSI CCRYGG 2 cut(s) 276, 586
BstF5I GGATG 4 cut(s) 180, 363, 635, 1258
BstFNI CGCG 2 cut(s) 818, 1144
BstH2I RGCGCY 1 cut(s) 1085
BstHHI GCGC 3 cut(s) 818, 1084, 1144
BstKTI GATC 7 cut(s) 60, 169, 850, 936, 1129, 1134, 1162
BstMAI GTCTC 2 cut(s) 734, 1185
BstMBI GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
BstMCI CGRYCG 2 cut(s) 586, 936
BstMWI GCNNNNNNNGC 4 cut(s) 358, 502, 1238, 1369
BstSCI CCNGG 4 cut(s) 162, 216, 217, 287
BstSFI CTRYAG 3 cut(s) 294, 676, 750
BstSLI GKGCMC 3 cut(s) 54, 224, 675
BstUI CGCG 2 cut(s) 818, 1144
BstV1I GCAGC 8 cut(s) 469, 483, 914, 1021, 1095, 1098, 1142, 1347
BstXI CCANNNNNNTGG 2 cut(s) 1234, 1325
BstZI CGGCCG 1 cut(s) 583
Bsu15I ATCGAT 2 cut(s) 524, 932
Bsu36I CCTNAGG 1 cut(s) 311
BsuI GTATCC 1 cut(s) 42
BsuRI GGCC 7 cut(s) 99, 210, 292, 585, 673, 797, 1317
BsuTUI ATCGAT 2 cut(s) 524, 932
BtgI CCRYGG 2 cut(s) 276, 586
BtsCI GGATG 4 cut(s) 180, 363, 635, 1258
BtsI GCAGTG 1 cut(s) 1239
BtsIMutI CAGTG 2 cut(s) 222, 1239
BveI ACCTGC 1 cut(s) 83
Cac8I GCNNGC 1 cut(s) 294
CciI TCATGA 1 cut(s) 267
CfoI GCGC 3 cut(s) 818, 1084, 1144
Cfr10I RCCGGY 1 cut(s) 709
Cfr13I GGNCC 3 cut(s) 280, 671, 672
Cfr9I CCCGGG 1 cut(s) 217
ClaI ATCGAT 2 cut(s) 524, 932
Csp6I GTAC 1 cut(s) 436
CviAII CATG 7 cut(s) 28, 268, 277, 374, 601, 805, 1289
CviQI GTAC 1 cut(s) 436
DdeI CTNAG 4 cut(s) 90, 311, 1063, 1195
DpnI GATC 7 cut(s) 59, 168, 849, 935, 1128, 1133, 1161
DpnII GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
EaeI YGGCCR 2 cut(s) 583, 1315
EagI CGGCCG 1 cut(s) 583
Eam1104I CTCTTC 1 cut(s) 973
EarI CTCTTC 1 cut(s) 973
EciI GGCGGA 1 cut(s) 492
Ecl136II GAGCTC 1 cut(s) 880
EclXI CGGCCG 1 cut(s) 583
Eco130I CCWWGG 4 cut(s) 35, 276, 1227, 1318
Eco24I GRGCYC 2 cut(s) 675, 882
Eco31I GGTCTC 1 cut(s) 734
Eco47I GGWCC 1 cut(s) 280
Eco52I CGGCCG 1 cut(s) 583
Eco53kI GAGCTC 1 cut(s) 880
Eco57I CTGAAG 1 cut(s) 1184
Eco81I CCTNAGG 1 cut(s) 311
Eco88I CYCGRG 1 cut(s) 217
EcoICRI GAGCTC 1 cut(s) 880
EcoO109I RGGNCCY 2 cut(s) 671, 672
EcoRI GAATTC 1 cut(s) 578
EcoT14I CCWWGG 4 cut(s) 35, 276, 1227, 1318
EcoT22I ATGCAT 1 cut(s) 836
EcoT38I GRGCYC 2 cut(s) 675, 882
ErhI CCWWGG 4 cut(s) 35, 276, 1227, 1318
FaeI CATG 7 cut(s) 31, 271, 280, 377, 604, 808, 1292
FaqI GGGAC 3 cut(s) 20, 104, 179
FatI CATG 7 cut(s) 27, 267, 276, 373, 600, 804, 1288
FbaI TGATCA 1 cut(s) 847
FokI GGATG 4 cut(s) 167, 370, 642, 1265
FriOI GRGCYC 2 cut(s) 675, 882
FspBI CTAG 1 cut(s) 1085
GlaI GCGC 3 cut(s) 817, 1083, 1143
HaeII RGCGCY 1 cut(s) 1085
HaeIII GGCC 7 cut(s) 99, 210, 292, 585, 673, 797, 1317
HapII CCGG 7 cut(s) 164, 218, 289, 362, 710, 950, 1314
HhaI GCGC 3 cut(s) 818, 1084, 1144
Hin1II CATG 7 cut(s) 31, 271, 280, 377, 604, 808, 1292
Hin6I GCGC 3 cut(s) 816, 1082, 1142
HinP1I GCGC 3 cut(s) 816, 1082, 1142
HincII GTYRAC 2 cut(s) 205, 444
HindII GTYRAC 2 cut(s) 205, 444
HinfI GANTC 4 cut(s) 105, 715, 929, 938
HpaII CCGG 7 cut(s) 164, 218, 289, 362, 710, 950, 1314
HphI GGTGA 4 cut(s) 277, 724, 1271, 1288
Hpy166II GTNNAC 5 cut(s) 205, 444, 890, 991, 1209
Hpy188I TCNGA 5 cut(s) 462, 840, 1078, 1131, 1164
Hpy188III TCNNGA 4 cut(s) 268, 857, 1021, 1210
Hpy8I GTNNAC 5 cut(s) 205, 444, 890, 991, 1209
Hpy99I CGWCG 1 cut(s) 466
HpyCH4III ACNGT 1 cut(s) 1346
HpyCH4IV ACGT 3 cut(s) 21, 201, 240
HpyF10VI GCNNNNNNNGC 4 cut(s) 358, 502, 1238, 1369
HpyF3I CTNAG 4 cut(s) 90, 311, 1063, 1195
HpySE526I ACGT 3 cut(s) 21, 201, 240
Hsp92II CATG 7 cut(s) 31, 271, 280, 377, 604, 808, 1292
HspAI GCGC 3 cut(s) 816, 1082, 1142
KpnI GGTACC 1 cut(s) 439
Ksp22I TGATCA 1 cut(s) 847
Kzo9I GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
LmnI GCTCC 3 cut(s) 267, 923, 1281
Lsp1109I GCAGC 8 cut(s) 469, 483, 914, 1021, 1095, 1098, 1142, 1347
LweI GCATC 3 cut(s) 348, 527, 625
MaeI CTAG 1 cut(s) 1085
MaeII ACGT 3 cut(s) 21, 201, 240
MaeIII GTNAC 4 cut(s) 141, 369, 1048, 1328
MalI GATC 7 cut(s) 59, 168, 849, 935, 1128, 1133, 1161
MboI GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
MboII GAAGA 2 cut(s) 889, 990
MhlI GDGCHC 4 cut(s) 54, 224, 675, 882
MluCI AATT 7 cut(s) 83, 414, 578, 611, 843, 860, 1304
MlyI GAGTC 1 cut(s) 947
MmeI TCCRAC 4 cut(s) 280, 485, 738, 1150
Mph1103I ATGCAT 1 cut(s) 836
MroXI GAANNNNTTC 2 cut(s) 578, 834
MseI TTAA 2 cut(s) 153, 393
MspI CCGG 7 cut(s) 164, 218, 289, 362, 710, 950, 1314
MspR9I CCNGG 4 cut(s) 164, 218, 219, 289
Mva1269I GAATGC 3 cut(s) 62, 834, 836
MvnI CGCG 2 cut(s) 818, 1144
MwoI GCNNNNNNNGC 4 cut(s) 358, 502, 1238, 1369
NciI CCSGG 4 cut(s) 164, 218, 219, 289
NcoI CCATGG 1 cut(s) 276
NdeII GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
NlaIII CATG 7 cut(s) 31, 271, 280, 377, 604, 808, 1292
NlaIV GGNNCC 5 cut(s) 53, 437, 673, 735, 1028
NmeAIII GCCGAG 1 cut(s) 1294
NmuCI GTSAC 1 cut(s) 1048
NsiI ATGCAT 1 cut(s) 836
NspV TTCGAA 1 cut(s) 1350
PagI TCATGA 1 cut(s) 267
PaqCI CACCTGC 1 cut(s) 83
PctI GAATGC 3 cut(s) 62, 834, 836
PdmI GAANNNNTTC 2 cut(s) 578, 834
PfeI GAWTC 3 cut(s) 105, 715, 929
Ple19I CGATCG 1 cut(s) 936
PleI GAGTC 1 cut(s) 946
PpsI GAGTC 1 cut(s) 946
Psp124BI GAGCTC 1 cut(s) 882
PspN4I GGNNCC 5 cut(s) 53, 437, 673, 735, 1028
PspOMI GGGCCC 1 cut(s) 671
PspPI GGNCC 3 cut(s) 280, 671, 672
PstI CTGCAG 1 cut(s) 298
PvuI CGATCG 1 cut(s) 936
RsaI GTAC 1 cut(s) 437
RsaNI GTAC 1 cut(s) 436
SacI GAGCTC 1 cut(s) 882
SaqAI TTAA 2 cut(s) 153, 393
Sau3AI GATC 7 cut(s) 57, 166, 847, 933, 1126, 1131, 1159
Sau96I GGNCC 3 cut(s) 280, 671, 672
SchI GAGTC 1 cut(s) 947
ScrFI CCNGG 4 cut(s) 164, 218, 219, 289
SduI GDGCHC 4 cut(s) 54, 224, 675, 882
SfaNI GCATC 3 cut(s) 348, 527, 625
SfcI CTRYAG 3 cut(s) 294, 676, 750
SfuI TTCGAA 1 cut(s) 1350
SinI GGWCC 1 cut(s) 280
SmaI CCCGGG 1 cut(s) 219
SmlI CTYRAG 2 cut(s) 320, 1021
SmoI CTYRAG 2 cut(s) 320, 1021
Sse9I AATT 7 cut(s) 83, 414, 578, 611, 843, 860, 1304
SsiI CCGC 5 cut(s) 273, 503, 914, 1059, 1257
SspMI CTAG 1 cut(s) 1085
SstI GAGCTC 1 cut(s) 882
StyD4I CCNGG 4 cut(s) 162, 216, 217, 287
StyI CCWWGG 4 cut(s) 35, 276, 1227, 1318
TaaI ACNGT 1 cut(s) 1346
TaiI ACGT 3 cut(s) 24, 204, 243
TaqI TCGA 6 cut(s) 524, 690, 792, 932, 936, 1350
TasI AATT 7 cut(s) 83, 414, 578, 611, 843, 860, 1304
TauI GCSGC 2 cut(s) 916, 1062
TfiI GAWTC 3 cut(s) 105, 715, 929
Tru1I TTAA 2 cut(s) 153, 393
Tru9I TTAA 2 cut(s) 153, 393
TscAI CASTG 2 cut(s) 229, 1239
TseFI GTSAC 1 cut(s) 1048
TseI GCWGC 8 cut(s) 482, 496, 902, 1009, 1108, 1111, 1155, 1360
Tsp45I GTSAC 1 cut(s) 1048
TspDTI ATGAA 2 cut(s) 169, 589
TspGWI ACGGA 1 cut(s) 479
TspMI CCCGGG 1 cut(s) 217
TspRI CASTG 2 cut(s) 229, 1239
VpaK11BI GGWCC 1 cut(s) 280
XapI RAATTY 2 cut(s) 578, 1304
XmaI CCCGGG 1 cut(s) 217
XmnI GAANNNNTTC 2 cut(s) 578, 834
XspI CTAG 1 cut(s) 1085
Zsp2I ATGCAT 1 cut(s) 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.