MD10G1287000.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
37638302 .. 37639330
1029 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1287000.v1.1.491

Sequence Viewer

Length: 1029 bp
ATGTATCCATGGTTTGCCATGGGACACTTAACCTCCTACCTCCACCTCTCCAACAAGCTAGCTGAAAGAGGCCACAGAATCTCCTTCTTCGTACCAACCAAAACCCAGCAAAAATTACAAGCTTTAAACCTCCACCCTCATCTCATATCCTTCATCCCCATCACCGTCCCTCACGTCGACGGCCTTCCGCCGGGCGCTGAAACCACAAACGATGTCCCTATCCCTTCCTACTCTCTCATTATGGCCGCCATGGACCTCACACAGCCAGCAATCCTGCAAGCAATCTGTGAACTAAACCCTGATTTTGTTTTCTTCGACTTCACGCCATGGTTGCCAAAACTATTACGTCAGCTAGGTACAGGCATTAAATCTATAAACTACATCATTATTAGTCCTGCATTTGTGGGTTATGTGAGAAGCCCAGAAAGAAAAGTACTAATGGAGAAATCGGTGTTGACGGAAGATGATCTTATCTACGATCTTGTCAACCCGCCGCCATCTTTTCCACCATCTTCAATCAAGCTACCAGCACACGAAGCTCGAATGCTGGCGCCATTCCTGCTGAAGGAGTTCGGCAGCGGGAGGAAATTCATCGAGCGCCAAATGATCTCCTTGAACGACTGCGACGCGGCGGCTTTCAGGACTTGTAGGGAGATGGAAGGGAAGTACTGCGATTATCTTGAAACCCAATTGAGAAAGCCGGTGCTTCTCGCAGGGCCGTTGGTGCCAGAGACCCCGACTACAGAGTTGGACGAGAAGTGGGCAAAATGGCTTGAAAGGTTCGAAGCGAAAAGCGTGATATATTGTGCGTTTGGAACTGAATGCGTTCTGAAAATTGATCAGTTTCAAGAATTGTTGTTGGGTTTTGAGCTCACGGGTTTACCCTTCTTCGCTGCACTGAAGCCGCCGATGGGAGTTGAAGCGATCGAGTCAGCGTTGCCGGAAGGGTTTGAAGGGAGGGTAAAAGGAAGAGGGGTTGTGAGTTGGGGTTGGGTGCAGCAGCCATTGATGTTGAAGCACCCTTCGTGA

Protein Analysis

343

Amino Acids

38.54

Weight (kDa)

6.1

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000510)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g08341 FvH4_3g08360 FvH4_3g13460 FvH4_5g23070 FvH4_6g03920 FvH4_7g24190
malus_domestica MD05G1307700.v1.1 MD05G1307800.v1.1 MD05G1307900.v1.1 MD05G1308000.v1.1 MD10G1286900.v1.1 MD10G1287000.v1.1 MD10G1287100.v1.1
prunus_persica Prupe.4G054800_v2.0.a1
pyrus_communis pycom05g28450 pycom05g28470 pycom10g23980 pycom10g24010
rosa_chinensis RchiOBHm_Chr3g0452471 RchiOBHm_Chr5g0009541 RchiOBHm_Chr5g0009571 RchiOBHm_Chr5g0009591 RchiOBHm_Chr5g0009631 RchiOBHm_Chr5g0009641
rosa_laevigata RLG00000025599 RLG00000031670 RLG00000031671 RLG00000031673 RLG00000031674 RLG00000031676 RLG00000031677
rosa_multiflora Rmu_co8094034.1_g000001 Rmu_co8292439.1_g000001 Rmu_co8399121.1_g000001 Rmu_co8467919.1_g000001 Rmu_sc0002711.1_g000003 Rmu_sc0002711.1_g000007 Rmu_sc0006311.1_g000004 Rmu_sc0006311.1_g000008 Rmu_sc0011680.1_g000005 Rmu_sc0025450.1_g000001 Rmu_sc0025487.1_g000001 Rmu_sc0034739.1_g000001 Rmu_sc0034740.1_g000001 Rmu_sc0036612.1_g000001 Rmu_sc0036650.1_g000001
rosa_roxburghii Rroxscaffold_1G00066560 Rroxscaffold_1G00066570 Rroxscaffold_1G00066590 Rroxscaffold_1G00067280 Rroxscaffold_1G00067290 Rroxscaffold_6G00429480 Rroxscaffold_6G00429490
rosa_rugosa Rorug02G0641100 Rorug02G0641200 Rorug04G0444300 Rorug04G0444400 Rorug04G0444500
rosa_samantha Rh3AG042900 Rh3BG044600 Rh3CG043200 Rh3DG044000 Rh4DG097500 Rh4DG250600 Rh5AG075400 Rh5AG075700 Rh5AG076000 Rh5AG076100 Rh5BG070900 Rh5BG071000 Rh5BG071100 Rh5BG071200 Rh5CG083100 Rh5CG083600 Rh5CG083700 Rh5CG083800 Rh5DG070900 Rh5DG071400 Rh5DG071500 Rh5DG071600 Rh5DG071700 Rh5DG071800
rosa_wichuraiana Rw3G003320 Rw5G006950 Rw5G006980 Rw5G006990 Rw5G007000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 550, 724
AccI GTMKAC 1 cut(s) 177
AccII CGCG 1 cut(s) 629
AciI CCGC 8 cut(s) 188, 246, 491, 494, 579, 629, 632, 905
AcoI YGGCCR 1 cut(s) 243
AcsI RAATTY 1 cut(s) 587
AcuI CTGAAG 2 cut(s) 584, 920
AcyI GRCGYC 1 cut(s) 551
AfaI GTAC 4 cut(s) 93, 358, 435, 668
AfiI CCNNNNNNNGG 3 cut(s) 190, 565, 911
AgsI TTSAA 8 cut(s) 516, 616, 683, 776, 848, 920, 953, 1015
AjiI CACGTC 1 cut(s) 175
AluBI AGCT 7 cut(s) 58, 62, 122, 352, 523, 539, 871
AluI AGCT 7 cut(s) 58, 62, 122, 352, 523, 539, 871
Alw21I GWGCWC 1 cut(s) 873
Alw26I GTCTC 1 cut(s) 725
AoxI GGCC 4 cut(s) 70, 181, 243, 716
ApeKI GCWGC 4 cut(s) 576, 893, 997, 1000
ApoI RAATTY 1 cut(s) 587
Asp700I GAANNNNTTC 2 cut(s) 569, 825
AspLEI GCGC 3 cut(s) 197, 553, 600
AspS9I GGNCC 2 cut(s) 253, 716
AsuC2I CCSGG 1 cut(s) 192
AsuHPI GGTGA 1 cut(s) 154
AsuII TTCGAA 1 cut(s) 783
AsuNHI GCTAGC 1 cut(s) 58
AvaII GGWCC 1 cut(s) 253
BanI GGYRCC 2 cut(s) 550, 724
BanII GRGCYC 1 cut(s) 873
Bbv12I GWGCWC 1 cut(s) 873
BbvI GCAGC 4 cut(s) 588, 880, 1009, 1012
BccI CCATC 5 cut(s) 167, 505, 517, 649, 904
BceAI ACGGC 2 cut(s) 196, 703
BciVI GTATCC 1 cut(s) 15
BclI TGATCA 1 cut(s) 838
BcnI CCSGG 1 cut(s) 192
BcoDI GTCTC 1 cut(s) 725
BfaI CTAG 2 cut(s) 59, 353
BfmI CTRYAG 1 cut(s) 741
BfoI RGCGCY 3 cut(s) 198, 554, 601
BfuI GTATCC 1 cut(s) 15
BisI GCNGC 9 cut(s) 246, 494, 577, 630, 633, 894, 905, 998, 1001
BlsI GCNGC 9 cut(s) 247, 495, 578, 631, 634, 895, 906, 999, 1002
BmcAI AGTACT 2 cut(s) 435, 668
Bme1390I CCNGG 1 cut(s) 192
Bme18I GGWCC 1 cut(s) 253
BmgBI CACGTC 1 cut(s) 175
BmgT120I GGNCC 2 cut(s) 253, 716
BmiI GGNNCC 2 cut(s) 552, 726
BmrFI CCNGG 1 cut(s) 192
BmtI GCTAGC 1 cut(s) 62
Bpu14I TTCGAA 1 cut(s) 783
BpuMI CCSGG 1 cut(s) 192
BsaHI GRCGYC 1 cut(s) 551
BsaI GGTCTC 1 cut(s) 725
BsaJI CCNNGG 4 cut(s) 8, 18, 249, 326
BsaXI ACNNNNNCTCC 4 cut(s) 17, 47, 65, 95
Bsc4I CCNNNNNNNGG 3 cut(s) 190, 565, 911
Bse118I RCCGGY 1 cut(s) 700
BseDI CCNNGG 4 cut(s) 8, 18, 249, 326
BseGI GGATG 1 cut(s) 153
BseLI CCNNNNNNNGG 3 cut(s) 190, 565, 911
BseXI GCAGC 4 cut(s) 588, 880, 1009, 1012
BseYI CCCAGC 1 cut(s) 105
BsgI GTGCAG 2 cut(s) 879, 1016
Bsh1236I CGCG 1 cut(s) 629
Bsh1285I CGRYCG 1 cut(s) 927
BshFI GGCC 4 cut(s) 72, 183, 245, 718
BshNI GGYRCC 2 cut(s) 550, 724
BsiEI CGRYCG 1 cut(s) 927
BsiHKAI GWGCWC 1 cut(s) 873
BsiSI CCGG 3 cut(s) 191, 701, 941
BslFI GGGAC 3 cut(s) 36, 152, 200
BslI CCNNNNNNNGG 3 cut(s) 190, 565, 911
BsmAI GTCTC 1 cut(s) 725
BsmFI GGGAC 3 cut(s) 36, 152, 200
BsmI GAATGC 2 cut(s) 549, 827
BsnI GGCC 4 cut(s) 72, 183, 245, 718
Bso31I GGTCTC 1 cut(s) 725
Bsp119I TTCGAA 1 cut(s) 783
Bsp1286I GDGCHC 1 cut(s) 873
Bsp143I GATC 5 cut(s) 466, 478, 606, 838, 924
Bsp19I CCATGG 4 cut(s) 8, 18, 249, 326
BspACI CCGC 8 cut(s) 188, 246, 491, 494, 579, 629, 632, 905
BspANI GGCC 4 cut(s) 72, 183, 245, 718
BspFNI CGCG 1 cut(s) 629
BspLI GGNNCC 2 cut(s) 552, 726
BspOI GCTAGC 1 cut(s) 62
BspT104I TTCGAA 1 cut(s) 783
BspT107I GGYRCC 2 cut(s) 550, 724
BspTNI GGTCTC 1 cut(s) 725
BsrFI RCCGGY 1 cut(s) 700
BssAI RCCGGY 1 cut(s) 700
BssECI CCNNGG 4 cut(s) 8, 18, 249, 326
BssMI GATC 5 cut(s) 466, 478, 606, 838, 924
BssNI GRCGYC 1 cut(s) 551
BssT1I CCWWGG 4 cut(s) 8, 18, 249, 326
Bst4CI ACNGT 1 cut(s) 166
Bst6I CTCTTC 1 cut(s) 964
BstACI GRCGYC 1 cut(s) 551
BstBI TTCGAA 1 cut(s) 783
BstC8I GCNNGC 4 cut(s) 60, 267, 279, 549
BstDSI CCRYGG 4 cut(s) 8, 18, 249, 326
BstENI CCTNNNNNAGG 1 cut(s) 563
BstF5I GGATG 1 cut(s) 153
BstFNI CGCG 1 cut(s) 629
BstH2I RGCGCY 3 cut(s) 198, 554, 601
BstHHI GCGC 3 cut(s) 197, 553, 600
BstKTI GATC 5 cut(s) 469, 481, 609, 841, 927
BstMAI GTCTC 1 cut(s) 725
BstMBI GATC 5 cut(s) 466, 478, 606, 838, 924
BstMCI CGRYCG 1 cut(s) 927
BstMWI GCNNNNNNNGC 4 cut(s) 331, 536, 559, 724
BstSCI CCNGG 1 cut(s) 190
BstSFI CTRYAG 1 cut(s) 741
BstUI CGCG 1 cut(s) 629
BstV1I GCAGC 4 cut(s) 588, 880, 1009, 1012
BsuI GTATCC 1 cut(s) 15
BsuRI GGCC 4 cut(s) 72, 183, 245, 718
BtgI CCRYGG 4 cut(s) 8, 18, 249, 326
BtrI CACGTC 1 cut(s) 175
BtsCI GGATG 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 896
Cac8I GCNNGC 4 cut(s) 60, 267, 279, 549
CfoI GCGC 3 cut(s) 197, 553, 600
Cfr10I RCCGGY 1 cut(s) 700
Cfr13I GGNCC 2 cut(s) 253, 716
CseI GACGC 1 cut(s) 635
Csp6I GTAC 4 cut(s) 92, 357, 434, 667
CviAII CATG 4 cut(s) 9, 19, 250, 327
CviQI GTAC 4 cut(s) 92, 357, 434, 667
DinI GGCGCC 1 cut(s) 552
DpnI GATC 5 cut(s) 468, 480, 608, 840, 926
DpnII GATC 5 cut(s) 466, 478, 606, 838, 924
DraI TTTAAA 1 cut(s) 126
EaeI YGGCCR 1 cut(s) 243
Eam1104I CTCTTC 1 cut(s) 964
EarI CTCTTC 1 cut(s) 964
EciI GGCGGA 1 cut(s) 177
Ecl136II GAGCTC 1 cut(s) 871
Eco130I CCWWGG 4 cut(s) 8, 18, 249, 326
Eco24I GRGCYC 1 cut(s) 873
Eco31I GGTCTC 1 cut(s) 725
Eco47I GGWCC 1 cut(s) 253
Eco53kI GAGCTC 1 cut(s) 871
Eco57I CTGAAG 2 cut(s) 584, 920
EcoICRI GAGCTC 1 cut(s) 871
EcoNI CCTNNNNNAGG 1 cut(s) 563
EcoT14I CCWWGG 4 cut(s) 8, 18, 249, 326
EcoT38I GRGCYC 1 cut(s) 873
EgeI GGCGCC 1 cut(s) 552
EheI GGCGCC 1 cut(s) 552
ErhI CCWWGG 4 cut(s) 8, 18, 249, 326
FaeI CATG 4 cut(s) 12, 22, 253, 330
FaiI YATR 9 cut(s) 10, 20, 146, 242, 251, 328, 374, 411, 802
FalI AAGNNNNNCTT 2 cut(s) 453, 485
FaqI GGGAC 3 cut(s) 36, 152, 200
FatI CATG 4 cut(s) 8, 18, 249, 326
FauI CCCGC 2 cut(s) 498, 572
FbaI TGATCA 1 cut(s) 838
FblI GTMKAC 1 cut(s) 177
Fnu4HI GCNGC 9 cut(s) 246, 494, 577, 630, 633, 894, 905, 998, 1001
FokI GGATG 1 cut(s) 140
FriOI GRGCYC 1 cut(s) 873
Fsp4HI GCNGC 9 cut(s) 246, 494, 577, 630, 633, 894, 905, 998, 1001
FspBI CTAG 2 cut(s) 59, 353
GlaI GCGC 3 cut(s) 196, 552, 599
GluI GCNGC 9 cut(s) 246, 494, 577, 630, 633, 894, 905, 998, 1001
GsaI CCCAGC 1 cut(s) 109
HaeII RGCGCY 3 cut(s) 198, 554, 601
HaeIII GGCC 4 cut(s) 72, 183, 245, 718
HapII CCGG 3 cut(s) 191, 701, 941
HgaI GACGC 1 cut(s) 635
HhaI GCGC 3 cut(s) 197, 553, 600
Hin1I GRCGYC 1 cut(s) 551
Hin1II CATG 4 cut(s) 12, 22, 253, 330
Hin6I GCGC 3 cut(s) 195, 551, 598
HinP1I GCGC 3 cut(s) 195, 551, 598
HincII GTYRAC 3 cut(s) 178, 456, 487
HindII GTYRAC 3 cut(s) 178, 456, 487
HindIII AAGCTT 1 cut(s) 120
HinfI GANTC 2 cut(s) 78, 929
HpaII CCGG 3 cut(s) 191, 701, 941
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 5 cut(s) 178, 290, 456, 487, 881
Hpy188I TCNGA 1 cut(s) 831
Hpy188III TCNNGA 4 cut(s) 640, 680, 848, 1026
Hpy8I GTNNAC 5 cut(s) 178, 290, 456, 487, 881
Hpy99I CGWCG 3 cut(s) 179, 182, 629
HpyAV CCTTC 9 cut(s) 94, 160, 194, 234, 559, 653, 895, 938, 947
HpyCH4III ACNGT 1 cut(s) 166
HpyCH4IV ACGT 2 cut(s) 174, 346
HpyCH4V TGCA 4 cut(s) 277, 398, 896, 997
HpyF10VI GCNNNNNNNGC 4 cut(s) 331, 536, 559, 724
HpySE526I ACGT 2 cut(s) 174, 346
Hsp92I GRCGYC 1 cut(s) 551
Hsp92II CATG 4 cut(s) 12, 22, 253, 330
HspAI GCGC 3 cut(s) 195, 551, 598
KasI GGCGCC 1 cut(s) 550
Ksp22I TGATCA 1 cut(s) 838
Kzo9I GATC 5 cut(s) 466, 478, 606, 838, 924
Lsp1109I GCAGC 4 cut(s) 588, 880, 1009, 1012
MaeI CTAG 2 cut(s) 59, 353
MaeII ACGT 2 cut(s) 174, 346
MalI GATC 5 cut(s) 468, 480, 608, 840, 926
MboI GATC 5 cut(s) 466, 478, 606, 838, 924
MboII GAAGA 6 cut(s) 79, 304, 473, 504, 880, 981
MfeI CAATTG 1 cut(s) 689
MhlI GDGCHC 1 cut(s) 873
MluCI AATT 5 cut(s) 113, 587, 689, 834, 851
Mly113I GGCGCC 1 cut(s) 551
MlyI GAGTC 1 cut(s) 938
MmeI TCCRAC 2 cut(s) 75, 729
MroXI GAANNNNTTC 2 cut(s) 569, 825
MseI TTAA 3 cut(s) 29, 125, 366
MspA1I CMGCKG 1 cut(s) 579
MspI CCGG 3 cut(s) 191, 701, 941
MspR9I CCNGG 1 cut(s) 192
MunI CAATTG 1 cut(s) 689
Mva1269I GAATGC 2 cut(s) 549, 827
MvnI CGCG 1 cut(s) 629
MwoI GCNNNNNNNGC 4 cut(s) 331, 536, 559, 724
NarI GGCGCC 1 cut(s) 551
NciI CCSGG 1 cut(s) 192
NcoI CCATGG 4 cut(s) 8, 18, 249, 326
NdeII GATC 5 cut(s) 466, 478, 606, 838, 924
NheI GCTAGC 1 cut(s) 58
NlaIII CATG 4 cut(s) 12, 22, 253, 330
NlaIV GGNNCC 2 cut(s) 552, 726
NspV TTCGAA 1 cut(s) 783
PctI GAATGC 2 cut(s) 549, 827
PdmI GAANNNNTTC 2 cut(s) 569, 825
PfeI GAWTC 1 cut(s) 78
PkrI GCNGC 9 cut(s) 247, 495, 578, 631, 634, 895, 906, 999, 1002
Ple19I CGATCG 1 cut(s) 927
PleI GAGTC 1 cut(s) 937
PluTI GGCGCC 1 cut(s) 554
PpsI GAGTC 1 cut(s) 937
Psp124BI GAGCTC 1 cut(s) 873
PspFI CCCAGC 1 cut(s) 105
PspN4I GGNNCC 2 cut(s) 552, 726
PspPI GGNCC 2 cut(s) 253, 716
PvuI CGATCG 1 cut(s) 927
RsaI GTAC 4 cut(s) 93, 358, 435, 668
RsaNI GTAC 4 cut(s) 92, 357, 434, 667
SacI GAGCTC 1 cut(s) 873
SalI GTCGAC 1 cut(s) 176
SaqAI TTAA 3 cut(s) 29, 125, 366
SatI GCNGC 9 cut(s) 246, 494, 577, 630, 633, 894, 905, 998, 1001
Sau3AI GATC 5 cut(s) 466, 478, 606, 838, 924
Sau96I GGNCC 2 cut(s) 253, 716
ScaI AGTACT 2 cut(s) 435, 668
SchI GAGTC 1 cut(s) 938
ScrFI CCNGG 1 cut(s) 192
SduI GDGCHC 1 cut(s) 873
SfcI CTRYAG 1 cut(s) 741
SfoI GGCGCC 1 cut(s) 552
SfuI TTCGAA 1 cut(s) 783
SgrDI CGTCGACG 1 cut(s) 176
SinI GGWCC 1 cut(s) 253
Sse9I AATT 5 cut(s) 113, 587, 689, 834, 851
SsiI CCGC 8 cut(s) 188, 246, 491, 494, 579, 629, 632, 905
SspDI GGCGCC 1 cut(s) 550
SspMI CTAG 2 cut(s) 59, 353
SstI GAGCTC 1 cut(s) 873
StyD4I CCNGG 1 cut(s) 190
StyI CCWWGG 4 cut(s) 8, 18, 249, 326
TaaI ACNGT 1 cut(s) 166
TaiI ACGT 2 cut(s) 177, 349
TaqI TCGA 6 cut(s) 177, 315, 541, 594, 783, 927
TasI AATT 5 cut(s) 113, 587, 689, 834, 851
TatI WGTACW 2 cut(s) 433, 666
TauI GCSGC 5 cut(s) 248, 496, 632, 635, 907
TfiI GAWTC 1 cut(s) 78
Tru1I TTAA 3 cut(s) 29, 125, 366
Tru9I TTAA 3 cut(s) 29, 125, 366
TscAI CASTG 1 cut(s) 903
TseI GCWGC 4 cut(s) 576, 893, 997, 1000
TspDTI ATGAA 2 cut(s) 142, 580
TspGWI ACGGA 1 cut(s) 473
TspRI CASTG 1 cut(s) 903
VpaK11BI GGWCC 1 cut(s) 253
XagI CCTNNNNNAGG 1 cut(s) 563
XapI RAATTY 1 cut(s) 587
XmiI GTMKAC 1 cut(s) 177
XmnI GAANNNNTTC 2 cut(s) 569, 825
XspI CTAG 2 cut(s) 59, 353
ZrmI AGTACT 2 cut(s) 435, 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.