Rmu_sc0006311.1_g000004

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006311.1
Physical Location & Seq
Reverse (-)
13156 .. 14394
1239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006311.1_g000004.1.cds

Sequence Viewer

Length: 1239 bp
atggtgcaattcaatctccatccagatctcatttcgttcatccccatcaatgttcctcatgttgatggactccctcccggcaccgaaaccacaaccgatattactttccatttgcacccccatcttgtcaccgccatggacctaactcgaccccaaattgaacaatccctttgcgaactcaaccctaacttcgtgttcttcgatttcagttactggttgcctgaattcctgcgtcaactaggtaagaacattaagtctgtgcattactgcacaattagtcctgcaactgtgggatacctgataagccctgagagaaaattgacggagaaaatgctaaccgaatttgaatacagggaggctccaacttcatttccttcgtcttcgattaagctacgagcccacgaagctcgaggactagtatatggtgcaaaccaggaatatggccgtgggattacatttctcaaacgccaacagatcaattttggtgattgtgatgccattgcatttaaaacttgtagagaattggagggtccattttgtaattatcttgaaacccaattgaggaagccggtgattcttgctggtccagtggtgccagagcctccaagttcgcagttggaagagaaatgggcaaaatggcttggagggttcgaaccaagagccctgattttctgtgcttttggaagtgaatgcattttgaaaaaagaacaattgcaagaactgttgttgggttttgagcttactggtttgcctttcttcgctgcactgaagccaccaaccggagttgaatcaattgaatcagcattgccacaagggtttttggagcgggttaaaggaaaaggggttgtttatgggggttgggttcagcagcctttgatacttaaacacccatctgtgggttgctttgtgactcattgtggctcggggtctttatccgaggcgctagtgaatgagtgtcaattggtccttctgccaaatgtgggagatcagttcatcaatgcgagaatgatgagtggcgatctgaaagtgggagttgaggttgagaaaggggatgaagatggcttgtttagcaaggccggggtttgcaaagctgtgaaagctgtgattgatgaggacagtgaggttgggaaggaggtgagggccaaccatgctaagtggagggagttcttctccagcaaagggcttgagaactcatacattgatgattttgtacacaggctccataaactgctaggatga

Protein Analysis

412

Amino Acids

45.99

Weight (kDa)

5.79

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000510)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g08341 FvH4_3g08360 FvH4_3g13460 FvH4_5g23070 FvH4_6g03920 FvH4_7g24190
malus_domestica MD05G1307700.v1.1 MD05G1307800.v1.1 MD05G1307900.v1.1 MD05G1308000.v1.1 MD10G1286900.v1.1 MD10G1287000.v1.1 MD10G1287100.v1.1
prunus_persica Prupe.4G054800_v2.0.a1
pyrus_communis pycom05g28450 pycom05g28470 pycom10g23980 pycom10g24010
rosa_chinensis RchiOBHm_Chr3g0452471 RchiOBHm_Chr5g0009541 RchiOBHm_Chr5g0009571 RchiOBHm_Chr5g0009591 RchiOBHm_Chr5g0009631 RchiOBHm_Chr5g0009641
rosa_laevigata RLG00000025599 RLG00000031670 RLG00000031671 RLG00000031673 RLG00000031674 RLG00000031676 RLG00000031677
rosa_multiflora Rmu_co8094034.1_g000001 Rmu_co8292439.1_g000001 Rmu_co8399121.1_g000001 Rmu_co8467919.1_g000001 Rmu_sc0002711.1_g000003 Rmu_sc0002711.1_g000007 Rmu_sc0006311.1_g000004 Rmu_sc0006311.1_g000008 Rmu_sc0011680.1_g000005 Rmu_sc0025450.1_g000001 Rmu_sc0025487.1_g000001 Rmu_sc0034739.1_g000001 Rmu_sc0034740.1_g000001 Rmu_sc0036612.1_g000001 Rmu_sc0036650.1_g000001
rosa_roxburghii Rroxscaffold_1G00066560 Rroxscaffold_1G00066570 Rroxscaffold_1G00066590 Rroxscaffold_1G00067280 Rroxscaffold_1G00067290 Rroxscaffold_6G00429480 Rroxscaffold_6G00429490
rosa_rugosa Rorug02G0641100 Rorug02G0641200 Rorug04G0444300 Rorug04G0444400 Rorug04G0444500
rosa_samantha Rh3AG042900 Rh3BG044600 Rh3CG043200 Rh3DG044000 Rh4DG097500 Rh4DG250600 Rh5AG075400 Rh5AG075700 Rh5AG076000 Rh5AG076100 Rh5BG070900 Rh5BG071000 Rh5BG071100 Rh5BG071200 Rh5CG083100 Rh5CG083600 Rh5CG083700 Rh5CG083800 Rh5DG070900 Rh5DG071400 Rh5DG071500 Rh5DG071600 Rh5DG071700 Rh5DG071800
rosa_wichuraiana Rw3G003320 Rw5G006950 Rw5G006980 Rw5G006990 Rw5G007000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 80, 592
AccBSI CCGCTC 1 cut(s) 826
AciI CCGC 2 cut(s) 132, 826
AcoI YGGCCR 1 cut(s) 442
AcsI RAATTY 2 cut(s) 224, 341
AcuI CTGAAG 1 cut(s) 788
AfaI GTAC 1 cut(s) 1212
AfiI CCNNNNNNNGG 6 cut(s) 561, 779, 895, 896, 980, 1179
AgsI TTSAA 7 cut(s) 13, 161, 347, 551, 700, 788, 797
AhlI ACTAGT 1 cut(s) 415
AjnI CCWGG 1 cut(s) 432
AluBI AGCT 5 cut(s) 391, 407, 739, 1091, 1100
AluI AGCT 5 cut(s) 391, 407, 739, 1091, 1100
AlwNI CAGNNNCTG 1 cut(s) 213
Ama87I CYCGRG 2 cut(s) 408, 922
AoxI GGCC 3 cut(s) 442, 1074, 1140
ApeKI GCWGC 2 cut(s) 761, 868
ApoI RAATTY 2 cut(s) 224, 341
AspLEI GCGC 1 cut(s) 943
AspS9I GGNCC 5 cut(s) 139, 530, 584, 964, 1140
AsuC2I CCSGG 2 cut(s) 78, 1078
AsuHPI GGTGA 4 cut(s) 121, 497, 583, 1147
AsuII TTCGAA 1 cut(s) 651
AvaI CYCGRG 2 cut(s) 408, 922
AvaII GGWCC 4 cut(s) 139, 530, 584, 964
BanI GGYRCC 2 cut(s) 80, 592
BanII GRGCYC 2 cut(s) 400, 664
BbsI GAAGAC 1 cut(s) 372
BbvI GCAGC 2 cut(s) 748, 880
BccI CCATC 6 cut(s) 27, 53, 59, 129, 898, 1052
BceAI ACGGC 1 cut(s) 429
BciT130I CCWGG 1 cut(s) 434
BciVI GTATCC 1 cut(s) 287
BcnI CCSGG 2 cut(s) 78, 1078
BcuI ACTAGT 1 cut(s) 415
BfaI CTAG 4 cut(s) 239, 416, 944, 1232
BfoI RGCGCY 1 cut(s) 944
BfuI GTATCC 1 cut(s) 287
BglII AGATCT 1 cut(s) 25
BisI GCNGC 2 cut(s) 762, 869
BlsI GCNGC 2 cut(s) 763, 870
Bme1390I CCNGG 3 cut(s) 78, 434, 1078
Bme18I GGWCC 4 cut(s) 139, 530, 584, 964
BmeT110I CYCGRG 2 cut(s) 408, 922
BmgT120I GGNCC 5 cut(s) 139, 530, 584, 964, 1140
BmiI GGNNCC 5 cut(s) 82, 360, 531, 594, 1220
BmrFI CCNGG 3 cut(s) 78, 434, 1078
BmsI GCATC 1 cut(s) 484
BpiI GAAGAC 1 cut(s) 372
BplI GAGNNNNNCTC 2 cut(s) 1154, 1186
BpmI CTGGAG 1 cut(s) 1156
Bpu14I TTCGAA 1 cut(s) 651
BpuEI CTTGAG 1 cut(s) 1205
BpuMI CCSGG 2 cut(s) 78, 1078
BsaJI CCNNGG 4 cut(s) 135, 445, 936, 1077
BsaWI WCCGGW 1 cut(s) 779
BsaXI ACNNNNNCTCC 4 cut(s) 1023, 1053, 1203, 1233
Bsc4I CCNNNNNNNGG 6 cut(s) 561, 779, 895, 896, 980, 1179
Bse118I RCCGGY 1 cut(s) 568
Bse1I ACTGG 3 cut(s) 218, 587, 748
Bse3DI GCAATG 2 cut(s) 498, 803
BseBI CCWGG 1 cut(s) 434
BseDI CCNNGG 4 cut(s) 135, 445, 936, 1077
BseGI GGATG 3 cut(s) 19, 39, 1057
BseLI CCNNNNNNNGG 6 cut(s) 561, 779, 895, 896, 980, 1179
BseMI GCAATG 2 cut(s) 498, 803
BseMII CTCAG 1 cut(s) 300
BseNI ACTGG 3 cut(s) 218, 587, 748
BseXI GCAGC 2 cut(s) 748, 880
BsgI GTGCAG 2 cut(s) 253, 747
BshFI GGCC 3 cut(s) 444, 1076, 1142
BshNI GGYRCC 2 cut(s) 80, 592
BsiHKCI CYCGRG 2 cut(s) 408, 922
BsiSI CCGG 4 cut(s) 78, 569, 780, 1077
BslI CCNNNNNNNGG 6 cut(s) 561, 779, 895, 896, 980, 1179
BsmI GAATGC 1 cut(s) 695
BsnI GGCC 3 cut(s) 444, 1076, 1142
BsoBI CYCGRG 2 cut(s) 408, 922
Bsp119I TTCGAA 1 cut(s) 651
Bsp1286I GDGCHC 2 cut(s) 400, 664
Bsp1407I TGTACA 1 cut(s) 1210
Bsp143I GATC 4 cut(s) 25, 474, 985, 1018
Bsp19I CCATGG 1 cut(s) 135
BspACI CCGC 2 cut(s) 132, 826
BspANI GGCC 3 cut(s) 444, 1076, 1142
BspCNI CTCAG 1 cut(s) 301
BspLI GGNNCC 5 cut(s) 82, 360, 531, 594, 1220
BspT104I TTCGAA 1 cut(s) 651
BspT107I GGYRCC 2 cut(s) 80, 592
BsrBI CCGCTC 1 cut(s) 826
BsrDI GCAATG 2 cut(s) 498, 803
BsrFI RCCGGY 1 cut(s) 568
BsrGI TGTACA 1 cut(s) 1210
BsrI ACTGG 3 cut(s) 218, 587, 748
BssAI RCCGGY 1 cut(s) 568
BssECI CCNNGG 4 cut(s) 135, 445, 936, 1077
BssMI GATC 4 cut(s) 25, 474, 985, 1018
BssT1I CCWWGG 1 cut(s) 135
Bst2UI CCWGG 1 cut(s) 434
Bst4CI ACNGT 3 cut(s) 289, 723, 1118
Bst6I CTCTTC 1 cut(s) 615
BstAUI TGTACA 1 cut(s) 1210
BstBI TTCGAA 1 cut(s) 651
BstDEI CTNAG 2 cut(s) 309, 1152
BstDSI CCRYGG 2 cut(s) 135, 445
BstF5I GGATG 3 cut(s) 19, 39, 1057
BstH2I RGCGCY 1 cut(s) 944
BstHHI GCGC 1 cut(s) 943
BstKTI GATC 4 cut(s) 28, 477, 988, 1021
BstMBI GATC 4 cut(s) 25, 474, 985, 1018
BstMWI GCNNNNNNNGC 4 cut(s) 404, 1068, 1097, 1148
BstNI CCWGG 1 cut(s) 434
BstSCI CCNGG 3 cut(s) 76, 432, 1076
BstV1I GCAGC 2 cut(s) 748, 880
BstV2I GAAGAC 1 cut(s) 372
BstX2I RGATCY 1 cut(s) 25
BstXI CCANNNNNNTGG 1 cut(s) 440
BstYI RGATCY 1 cut(s) 25
BsuI GTATCC 1 cut(s) 287
BsuRI GGCC 3 cut(s) 444, 1076, 1142
BtgI CCRYGG 2 cut(s) 135, 445
BtsCI GGATG 3 cut(s) 19, 39, 1057
BtsIMutI CAGTG 3 cut(s) 594, 764, 1123
CaiI CAGNNNCTG 1 cut(s) 213
CfoI GCGC 1 cut(s) 943
Cfr10I RCCGGY 1 cut(s) 568
Cfr13I GGNCC 5 cut(s) 139, 530, 584, 964, 1140
CseI GACGC 1 cut(s) 221
Csp6I GTAC 1 cut(s) 1211
CviAII CATG 3 cut(s) 59, 136, 1148
CviQI GTAC 1 cut(s) 1211
DdeI CTNAG 2 cut(s) 309, 1152
DpnI GATC 4 cut(s) 27, 476, 987, 1020
DpnII GATC 4 cut(s) 25, 474, 985, 1018
DraI TTTAAA 1 cut(s) 508
EaeI YGGCCR 1 cut(s) 442
Eam1104I CTCTTC 1 cut(s) 615
EarI CTCTTC 1 cut(s) 615
Eco130I CCWWGG 1 cut(s) 135
Eco24I GRGCYC 2 cut(s) 400, 664
Eco47I GGWCC 4 cut(s) 139, 530, 584, 964
Eco57I CTGAAG 1 cut(s) 788
Eco88I CYCGRG 2 cut(s) 408, 922
EcoRI GAATTC 1 cut(s) 224
EcoRII CCWGG 1 cut(s) 432
EcoT14I CCWWGG 1 cut(s) 135
EcoT22I ATGCAT 1 cut(s) 695
EcoT38I GRGCYC 2 cut(s) 400, 664
ErhI CCWWGG 1 cut(s) 135
FaeI CATG 3 cut(s) 62, 139, 1151
FaiI YATR 9 cut(s) 60, 137, 421, 423, 441, 852, 1149, 1195, 1224
FatI CATG 3 cut(s) 58, 135, 1147
FauI CCCGC 1 cut(s) 819
Fnu4HI GCNGC 2 cut(s) 762, 869
FokI GGATG 3 cut(s) 6, 26, 1064
FriOI GRGCYC 2 cut(s) 400, 664
Fsp4HI GCNGC 2 cut(s) 762, 869
FspBI CTAG 4 cut(s) 239, 416, 944, 1232
GlaI GCGC 1 cut(s) 942
GluI GCNGC 2 cut(s) 762, 869
GsuI CTGGAG 1 cut(s) 1156
HaeII RGCGCY 1 cut(s) 944
HaeIII GGCC 3 cut(s) 444, 1076, 1142
HapII CCGG 4 cut(s) 78, 569, 780, 1077
HgaI GACGC 1 cut(s) 221
HhaI GCGC 1 cut(s) 943
Hin1II CATG 3 cut(s) 62, 139, 1151
Hin6I GCGC 1 cut(s) 941
HinP1I GCGC 1 cut(s) 941
HincII GTYRAC 1 cut(s) 236
HindII GTYRAC 1 cut(s) 236
HinfI GANTC 5 cut(s) 69, 574, 788, 797, 910
HpaII CCGG 4 cut(s) 78, 569, 780, 1077
HphI GGTGA 4 cut(s) 121, 497, 583, 1147
Hpy166II GTNNAC 2 cut(s) 236, 1213
Hpy188I TCNGA 2 cut(s) 937, 1023
Hpy188III TCNNGA 2 cut(s) 23, 548
Hpy8I GTNNAC 2 cut(s) 236, 1213
HpyAV CCTTC 3 cut(s) 384, 977, 1123
HpyCH4III ACNGT 3 cut(s) 289, 723, 1118
HpyF10VI GCNNNNNNNGC 4 cut(s) 404, 1068, 1097, 1148
HpyF3I CTNAG 2 cut(s) 309, 1152
Hsp92II CATG 3 cut(s) 62, 139, 1151
HspAI GCGC 1 cut(s) 941
Kzo9I GATC 4 cut(s) 25, 474, 985, 1018
LmnI GCTCC 3 cut(s) 364, 823, 1224
Lsp1109I GCAGC 2 cut(s) 748, 880
LweI GCATC 1 cut(s) 484
MaeI CTAG 4 cut(s) 239, 416, 944, 1232
MaeIII GTNAC 3 cut(s) 127, 209, 907
MalI GATC 4 cut(s) 27, 476, 987, 1020
MbiI CCGCTC 1 cut(s) 826
MboI GATC 4 cut(s) 25, 474, 985, 1018
MboII GAAGA 6 cut(s) 190, 372, 632, 748, 1067, 1159
MfeI CAATTG 4 cut(s) 557, 710, 792, 959
MflI RGATCY 1 cut(s) 25
MhlI GDGCHC 2 cut(s) 400, 664
MlyI GAGTC 2 cut(s) 63, 904
MmeI TCCRAC 2 cut(s) 386, 597
Mph1103I ATGCAT 1 cut(s) 695
MseI TTAA 5 cut(s) 252, 387, 507, 831, 882
MslI CAYNNNNRTG 2 cut(s) 63, 134
MspI CCGG 4 cut(s) 78, 569, 780, 1077
MspR9I CCNGG 3 cut(s) 78, 434, 1078
MunI CAATTG 4 cut(s) 557, 710, 792, 959
Mva1269I GAATGC 1 cut(s) 695
MvaI CCWGG 1 cut(s) 434
MwoI GCNNNNNNNGC 4 cut(s) 404, 1068, 1097, 1148
NciI CCSGG 2 cut(s) 78, 1078
NcoI CCATGG 1 cut(s) 135
NdeII GATC 4 cut(s) 25, 474, 985, 1018
NlaIII CATG 3 cut(s) 62, 139, 1151
NlaIV GGNNCC 5 cut(s) 82, 360, 531, 594, 1220
NmuCI GTSAC 2 cut(s) 127, 907
NsiI ATGCAT 1 cut(s) 695
NspV TTCGAA 1 cut(s) 651
PaeR7I CTCGAG 1 cut(s) 408
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PctI GAATGC 1 cut(s) 695
PfeI GAWTC 3 cut(s) 574, 788, 797
PkrI GCNGC 2 cut(s) 763, 870
PleI GAGTC 2 cut(s) 63, 904
PpsI GAGTC 2 cut(s) 63, 904
Psp6I CCWGG 1 cut(s) 432
PspGI CCWGG 1 cut(s) 432
PspN4I GGNNCC 5 cut(s) 82, 360, 531, 594, 1220
PspPI GGNCC 5 cut(s) 139, 530, 584, 964, 1140
PspXI VCTCGAGB 1 cut(s) 408
PstNI CAGNNNCTG 1 cut(s) 213
PsuI RGATCY 1 cut(s) 25
RsaI GTAC 1 cut(s) 1212
RsaNI GTAC 1 cut(s) 1211
RseI CAYNNNNRTG 2 cut(s) 63, 134
SaqAI TTAA 5 cut(s) 252, 387, 507, 831, 882
SatI GCNGC 2 cut(s) 762, 869
Sau3AI GATC 4 cut(s) 25, 474, 985, 1018
Sau96I GGNCC 5 cut(s) 139, 530, 584, 964, 1140
SchI GAGTC 2 cut(s) 63, 904
ScrFI CCNGG 3 cut(s) 78, 434, 1078
SduI GDGCHC 2 cut(s) 400, 664
SfaNI GCATC 1 cut(s) 484
Sfr274I CTCGAG 1 cut(s) 408
SfuI TTCGAA 1 cut(s) 651
SinI GGWCC 4 cut(s) 139, 530, 584, 964
SlaI CTCGAG 1 cut(s) 408
SmiMI CAYNNNNRTG 2 cut(s) 63, 134
SmlI CTYRAG 2 cut(s) 408, 1184
SmoI CTYRAG 2 cut(s) 408, 1184
SpeI ACTAGT 1 cut(s) 415
SsiI CCGC 2 cut(s) 132, 826
SspMI CTAG 4 cut(s) 239, 416, 944, 1232
StyD4I CCNGG 3 cut(s) 76, 432, 1076
StyI CCWWGG 1 cut(s) 135
TaaI ACNGT 3 cut(s) 289, 723, 1118
TaqI TCGA 5 cut(s) 148, 201, 383, 409, 651
TatI WGTACW 1 cut(s) 1210
TfiI GAWTC 3 cut(s) 574, 788, 797
Tru1I TTAA 5 cut(s) 252, 387, 507, 831, 882
Tru9I TTAA 5 cut(s) 252, 387, 507, 831, 882
TscAI CASTG 3 cut(s) 594, 771, 1123
TseFI GTSAC 2 cut(s) 127, 907
TseI GCWGC 2 cut(s) 761, 868
Tsp45I GTSAC 2 cut(s) 127, 907
TspDTI ATGAA 4 cut(s) 28, 357, 982, 1068
TspGWI ACGGA 1 cut(s) 338
TspRI CASTG 3 cut(s) 594, 771, 1123
VpaK11BI GGWCC 4 cut(s) 139, 530, 584, 964
XapI RAATTY 2 cut(s) 224, 341
XhoI CTCGAG 1 cut(s) 408
XspI CTAG 4 cut(s) 239, 416, 944, 1232
Zsp2I ATGCAT 1 cut(s) 695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.