RLG00000031676

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
7244570 .. 7245390
821 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031676

Sequence Viewer

Length: 705 bp
ATGGCAAACATGGAATATGGTAGTGGTGTGACATTCGCCAAACGCCACTGGACCTCTTTCGGCAATTGTGATGCAATTTGTTTCCAAAGTTGCAGAGAATTCACAGGGTCATTTTGTAACTATATAGAAATACAAATGAACAAGCCAGTCATTCTTGCAGGGCCAGTGGAACAGTTCCAAGAGTTGTTACTTGGTTTTGAGCTAACTGGTTTGCCATTCTTCGCTGTCCTGAAGCCGCCAGCCGGAGTTGAATTAATTGACTCGGTACTGCCAGAAGGCTTTGAAGAGAGTGTAAAAGGAAAAGGAGTGGTTCATGGGGGTTGGGTTCAGCAGCCATTGATATTGAAGCACCCATCTGTGGATTGCTTTGTGACTCACTGTGGTTCTGGGTCTTTAAACGAGGCGTTGCTGAATGAGTGCCAATTGGTGTTTCTGCCAAATTGGGCTGATCAGGTAATCAACGCGAGAATGATGAGCGGTGATTTGAAAGTTGGTGTTGAAGTTGAGAAAGGGGATGAAGATGGATTGTTCACCAATGAAGGGGTTTGCAAAGCTGTGAAAGCTATGATGGATAAGAACAGTGAGGTTGGAAAGGAGGTGAGGTCCAACCATGCTAAGTGGAGGGAGTTCTTCTCCAATAAAGGAATTGAGAGCTCATACATTGATGGTTTTCTGCAGAAGCTGCATGAAGTACTGCTGGGATGA

Protein Analysis

235

Amino Acids

25.84

Weight (kDa)

5.09

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 108 - 193 6.8e-11 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000510)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g08341 FvH4_3g08360 FvH4_3g13460 FvH4_5g23070 FvH4_6g03920 FvH4_7g24190
malus_domestica MD05G1307700.v1.1 MD05G1307800.v1.1 MD05G1307900.v1.1 MD05G1308000.v1.1 MD10G1286900.v1.1 MD10G1287000.v1.1 MD10G1287100.v1.1
prunus_persica Prupe.4G054800_v2.0.a1
pyrus_communis pycom05g28450 pycom05g28470 pycom10g23980 pycom10g24010
rosa_chinensis RchiOBHm_Chr3g0452471 RchiOBHm_Chr5g0009541 RchiOBHm_Chr5g0009571 RchiOBHm_Chr5g0009591 RchiOBHm_Chr5g0009631 RchiOBHm_Chr5g0009641
rosa_laevigata RLG00000025599 RLG00000031670 RLG00000031671 RLG00000031673 RLG00000031674 RLG00000031676 RLG00000031677
rosa_multiflora Rmu_co8094034.1_g000001 Rmu_co8292439.1_g000001 Rmu_co8399121.1_g000001 Rmu_co8467919.1_g000001 Rmu_sc0002711.1_g000003 Rmu_sc0002711.1_g000007 Rmu_sc0006311.1_g000004 Rmu_sc0006311.1_g000008 Rmu_sc0011680.1_g000005 Rmu_sc0025450.1_g000001 Rmu_sc0025487.1_g000001 Rmu_sc0034739.1_g000001 Rmu_sc0034740.1_g000001 Rmu_sc0036612.1_g000001 Rmu_sc0036650.1_g000001
rosa_roxburghii Rroxscaffold_1G00066560 Rroxscaffold_1G00066570 Rroxscaffold_1G00066590 Rroxscaffold_1G00067280 Rroxscaffold_1G00067290 Rroxscaffold_6G00429480 Rroxscaffold_6G00429490
rosa_rugosa Rorug02G0641100 Rorug02G0641200 Rorug04G0444300 Rorug04G0444400 Rorug04G0444500
rosa_samantha Rh3AG042900 Rh3BG044600 Rh3CG043200 Rh3DG044000 Rh4DG097500 Rh4DG250600 Rh5AG075400 Rh5AG075700 Rh5AG076000 Rh5AG076100 Rh5BG070900 Rh5BG071000 Rh5BG071100 Rh5BG071200 Rh5CG083100 Rh5CG083600 Rh5CG083700 Rh5CG083800 Rh5DG070900 Rh5DG071400 Rh5DG071500 Rh5DG071600 Rh5DG071700 Rh5DG071800
rosa_wichuraiana Rw3G003320 Rw5G006950 Rw5G006980 Rw5G006990 Rw5G007000

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 477
AccII CGCG 1 cut(s) 464
AciI CCGC 2 cut(s) 236, 477
AcsI RAATTY 1 cut(s) 98
AcuI CTGAAG 1 cut(s) 251
AfaI GTAC 2 cut(s) 267, 693
AfiI CCNNNNNNNGG 3 cut(s) 242, 358, 540
AgsI TTSAA 5 cut(s) 251, 284, 346, 487, 500
AjuI GAANNNNNNNTTGG 2 cut(s) 414, 446
AluBI AGCT 5 cut(s) 202, 554, 563, 654, 682
AluI AGCT 5 cut(s) 202, 554, 563, 654, 682
Alw21I GWGCWC 1 cut(s) 656
AlwNI CAGNNNCTG 1 cut(s) 682
AoxI GGCC 1 cut(s) 161
ApeKI GCWGC 2 cut(s) 331, 682
ApoI RAATTY 1 cut(s) 98
AseI ATTAAT 1 cut(s) 254
AspS9I GGNCC 3 cut(s) 51, 161, 603
AsuHPI GGTGA 3 cut(s) 491, 523, 610
AvaII GGWCC 2 cut(s) 51, 603
BanII GRGCYC 1 cut(s) 656
Bbv12I GWGCWC 1 cut(s) 656
BbvI GCAGC 2 cut(s) 343, 669
BccI CCATC 4 cut(s) 361, 515, 562, 659
BclI TGATCA 1 cut(s) 448
BfmI CTRYAG 1 cut(s) 674
BisI GCNGC 3 cut(s) 236, 332, 683
BlsI GCNGC 3 cut(s) 237, 333, 684
BmcAI AGTACT 1 cut(s) 693
Bme18I GGWCC 2 cut(s) 51, 603
BmgT120I GGNCC 3 cut(s) 51, 161, 603
BmsI GCATC 1 cut(s) 61
BplI GAGNNNNNCTC 2 cut(s) 617, 649
BsaXI ACNNNNNCTCC 2 cut(s) 587, 617
Bsc4I CCNNNNNNNGG 3 cut(s) 242, 358, 540
Bse1I ACTGG 4 cut(s) 53, 146, 164, 211
BseGI GGATG 1 cut(s) 520
BseLI CCNNNNNNNGG 3 cut(s) 242, 358, 540
BseNI ACTGG 4 cut(s) 53, 146, 164, 211
BseXI GCAGC 2 cut(s) 343, 669
BseYI CCCAGC 1 cut(s) 697
Bsh1236I CGCG 1 cut(s) 464
BshFI GGCC 1 cut(s) 163
BsiHKAI GWGCWC 1 cut(s) 656
BsiSI CCGG 1 cut(s) 243
BslI CCNNNNNNNGG 3 cut(s) 242, 358, 540
BsnI GGCC 1 cut(s) 163
Bsp1286I GDGCHC 1 cut(s) 656
Bsp143I GATC 1 cut(s) 448
BspACI CCGC 2 cut(s) 236, 477
BspANI GGCC 1 cut(s) 163
BspFNI CGCG 1 cut(s) 464
BspMAI CTGCAG 1 cut(s) 678
BsrBI CCGCTC 1 cut(s) 477
BsrI ACTGG 4 cut(s) 53, 146, 164, 211
BssMI GATC 1 cut(s) 448
Bst4CI ACNGT 3 cut(s) 174, 380, 581
Bst6I CTCTTC 1 cut(s) 279
BstAPI GCANNNNNTGC 1 cut(s) 682
BstC8I GCNNGC 1 cut(s) 240
BstDEI CTNAG 1 cut(s) 615
BstF5I GGATG 1 cut(s) 520
BstFNI CGCG 1 cut(s) 464
BstKTI GATC 1 cut(s) 451
BstMBI GATC 1 cut(s) 448
BstMWI GCNNNNNNNGC 2 cut(s) 560, 682
BstSFI CTRYAG 1 cut(s) 674
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 2 cut(s) 343, 669
BsuRI GGCC 1 cut(s) 163
BtsCI GGATG 1 cut(s) 520
BtsIMutI CAGTG 4 cut(s) 46, 171, 376, 586
Cac8I GCNNGC 1 cut(s) 240
CaiI CAGNNNCTG 1 cut(s) 682
Cfr13I GGNCC 3 cut(s) 51, 161, 603
Csp6I GTAC 2 cut(s) 266, 692
CviAII CATG 4 cut(s) 10, 314, 611, 686
CviQI GTAC 2 cut(s) 266, 692
DdeI CTNAG 1 cut(s) 615
DpnI GATC 1 cut(s) 450
DpnII GATC 1 cut(s) 448
DraI TTTAAA 1 cut(s) 396
Eam1104I CTCTTC 1 cut(s) 279
EarI CTCTTC 1 cut(s) 279
Ecl136II GAGCTC 1 cut(s) 654
Eco24I GRGCYC 1 cut(s) 656
Eco47I GGWCC 2 cut(s) 51, 603
Eco53kI GAGCTC 1 cut(s) 654
Eco57I CTGAAG 1 cut(s) 251
EcoICRI GAGCTC 1 cut(s) 654
EcoRI GAATTC 1 cut(s) 98
EcoT38I GRGCYC 1 cut(s) 656
FaeI CATG 4 cut(s) 13, 317, 614, 689
FaiI YATR 9 cut(s) 11, 18, 123, 125, 315, 566, 612, 658, 687
FatI CATG 4 cut(s) 9, 313, 610, 685
FbaI TGATCA 1 cut(s) 448
Fnu4HI GCNGC 3 cut(s) 236, 332, 683
FokI GGATG 1 cut(s) 527
FriOI GRGCYC 1 cut(s) 656
Fsp4HI GCNGC 3 cut(s) 236, 332, 683
GluI GCNGC 3 cut(s) 236, 332, 683
GsaI CCCAGC 1 cut(s) 701
HaeIII GGCC 1 cut(s) 163
HapII CCGG 1 cut(s) 243
Hin1II CATG 4 cut(s) 13, 317, 614, 689
HinfI GANTC 2 cut(s) 260, 373
HpaII CCGG 1 cut(s) 243
HphI GGTGA 3 cut(s) 491, 523, 610
Hpy166II GTNNAC 1 cut(s) 531
Hpy188III TCNNGA 1 cut(s) 229
Hpy8I GTNNAC 1 cut(s) 531
HpyAV CCTTC 2 cut(s) 269, 533
HpyCH4III ACNGT 3 cut(s) 174, 380, 581
HpyCH4V TGCA 6 cut(s) 74, 93, 158, 549, 676, 685
HpyF10VI GCNNNNNNNGC 2 cut(s) 560, 682
HpyF3I CTNAG 1 cut(s) 615
Hsp92II CATG 4 cut(s) 13, 317, 614, 689
Ksp22I TGATCA 1 cut(s) 448
Kzo9I GATC 1 cut(s) 448
Lsp1109I GCAGC 2 cut(s) 343, 669
LweI GCATC 1 cut(s) 61
MaeIII GTNAC 4 cut(s) 28, 116, 186, 370
MalI GATC 1 cut(s) 450
MbiI CCGCTC 1 cut(s) 477
MboI GATC 1 cut(s) 448
MboII GAAGA 4 cut(s) 211, 296, 530, 622
MfeI CAATTG 2 cut(s) 64, 422
MhlI GDGCHC 1 cut(s) 656
MluCI AATT 8 cut(s) 64, 75, 98, 251, 255, 422, 439, 645
MlyI GAGTC 2 cut(s) 254, 367
MmeI TCCRAC 2 cut(s) 568, 630
MnlI CCTC 6 cut(s) 64, 394, 577, 589, 594, 615
MseI TTAA 2 cut(s) 254, 395
MspI CCGG 1 cut(s) 243
MunI CAATTG 2 cut(s) 64, 422
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 2 cut(s) 560, 682
NdeII GATC 1 cut(s) 448
NlaIII CATG 4 cut(s) 13, 317, 614, 689
NmuCI GTSAC 2 cut(s) 28, 370
PkrI GCNGC 3 cut(s) 237, 333, 684
PleI GAGTC 2 cut(s) 254, 367
PpsI GAGTC 2 cut(s) 254, 367
PshBI ATTAAT 1 cut(s) 254
Psp124BI GAGCTC 1 cut(s) 656
PspFI CCCAGC 1 cut(s) 697
PspPI GGNCC 3 cut(s) 51, 161, 603
PstI CTGCAG 1 cut(s) 678
PstNI CAGNNNCTG 1 cut(s) 682
RsaI GTAC 2 cut(s) 267, 693
RsaNI GTAC 2 cut(s) 266, 692
SacI GAGCTC 1 cut(s) 656
SaqAI TTAA 2 cut(s) 254, 395
SatI GCNGC 3 cut(s) 236, 332, 683
Sau3AI GATC 1 cut(s) 448
Sau96I GGNCC 3 cut(s) 51, 161, 603
ScaI AGTACT 1 cut(s) 693
SchI GAGTC 2 cut(s) 254, 367
SduI GDGCHC 1 cut(s) 656
SfaNI GCATC 1 cut(s) 61
SfcI CTRYAG 1 cut(s) 674
SinI GGWCC 2 cut(s) 51, 603
Sse9I AATT 8 cut(s) 64, 75, 98, 251, 255, 422, 439, 645
SsiI CCGC 2 cut(s) 236, 477
SstI GAGCTC 1 cut(s) 656
TaaI ACNGT 3 cut(s) 174, 380, 581
TasI AATT 8 cut(s) 64, 75, 98, 251, 255, 422, 439, 645
TatI WGTACW 1 cut(s) 691
TauI GCSGC 1 cut(s) 238
Tru1I TTAA 2 cut(s) 254, 395
Tru9I TTAA 2 cut(s) 254, 395
TscAI CASTG 4 cut(s) 53, 171, 383, 586
TseFI GTSAC 2 cut(s) 28, 370
TseI GCWGC 2 cut(s) 331, 682
Tsp45I GTSAC 2 cut(s) 28, 370
TspDTI ATGAA 5 cut(s) 152, 302, 531, 552, 702
TspRI CASTG 4 cut(s) 53, 171, 383, 586
VpaK11BI GGWCC 2 cut(s) 51, 603
VspI ATTAAT 1 cut(s) 254
XapI RAATTY 1 cut(s) 98
ZrmI AGTACT 1 cut(s) 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.