Prupe.3G140700_v2.0.a1

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000634
Physical Location & Seq
Reverse (-)
14881720 .. 14886202
4483 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G140700.1

Sequence Viewer

Length: 1395 bp
ATGGAGTTCGGGAACTTGGAAGGACTAGAGCCAGTGAGCCCAAATGGCCAGTACTTCAGCAGTGATGTGATAACTCTTTCGGTTCTTGCTGTTTTGGAATTTGAGATTCCAATTATTGATGCCGAGTCTCAAACAATGTCATTGCTTAAGAACGTCTTCCTCCCCATCAGCCCCCGTTTCTCCTCTATCATGGTTGAAAATGATGGAAAGAAAGAGTGGAGAAGGGTCGAAGTGAAGCTTGAAGACCACGTTATGATCCCTATTTTCCCTTCCAACCTGTCGCCTGAATCATATGACCAGTATCTTGAGGACTATTTGTCAAGGTTATCAACAGAAAGATATCCACAAGGCAAACCACTATGGGAAGTTCATATTATCAAGTACCCAACTAGCAATGCAGCTGGTAATGTAGTCTTCAAGTTTCACCATGCTCTAGGAGATGGCTACTCTCTCATGGGTGCTCTCATTTCTACCCTACAAAGAGCTGACAACCCTTCTCTCCCCTTAACTTTTCCTTCACGACAGCGGTCAGAATCGAAGAAGAGGGAGAATTTTTTTGTGACTAAGATTTTCTCATCTGCATGCAACACAATTTCAGATATTTTGTGGGGCATTTCGAAGACCTTGAAAGAAGATGATCTAACACCAATCAAGTCGAGCAACGATGCAATTGAATTTCGCCCAAGTACTATAGCAACTATGACCTTCTCTCTTGATCAACTCAAATCAATCAAGAACAAGTTTGGAGTGACTCTAAATGATGTTCTCACCGGGATGATCTTCTTCGGAACTCGACTGTACATGCAAGAGATTGACCAAAGTTCAAGCACAGCAGATTGTACAGCAATGGTGTTGCTGAACACAAGGCTCATGGGGGATTATATGCCAATTGAGGAGATGATCAAACCCAACAGCAAGATGCCATGGGGAAATCGTTTTACATTCTTGCAAGTACCCATACCCAATTTAACTGAACTCTCAAATGCGGAGGACTTTATCAGGCACACACACAAAATGATAAAGAGGAAGAGAAACTCTTTAGCTGCTCATTTCACTAGTAGGCTATTGGAGATTGTGAACAAATTTGGAAGCCGTGAGGCATCCAGCAGATACATTCATCGCACATTGAAGAACTCGAGCATGGTAATCTCAAATATGATTGGACCTGTGGAGCAGATGTCTCTGGCTAATCATCCAATTAAAGGTTTCTACTTTTTGGTTCCTGGTTTACCTCAGGGCTTTGACATAACCATTGTAAGTTATATGGGGAATGTGAGACTAGCCTTCAAGATGGAAAAAGGTATCATAGATCCACAGAAGTTAAAGTCATGCATGGAAAATGCCTTGGACATGATAGTCAAAGACTCCAACAAGAATCCGAACCTCAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

465

Amino Acids

52.6

Weight (kDa)

7.7

Isoelectric Point (pI)

51.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1355
AciI CCGC 2 cut(s) 526, 986
AclWI GGATC 2 cut(s) 250, 1304
AcoI YGGCCR 1 cut(s) 46
AcsI RAATTY 4 cut(s) 98, 550, 674, 1082
AcuI CTGAAG 1 cut(s) 40
AfaI GTAC 6 cut(s) 53, 383, 688, 800, 841, 954
AfiI CCNNNNNNNGG 1 cut(s) 1202
AflII CTTAAG 1 cut(s) 146
AgsI TTSAA 8 cut(s) 197, 242, 418, 628, 674, 825, 1129, 1288
AhdI GACNNNNNGTC 1 cut(s) 316
AhlI ACTAGT 1 cut(s) 1055
AjnI CCWGG 1 cut(s) 1222
AluBI AGCT 4 cut(s) 238, 401, 485, 1043
AluI AGCT 4 cut(s) 238, 401, 485, 1043
Alw21I GWGCWC 1 cut(s) 463
Alw26I GTCTC 3 cut(s) 132, 1185, 1270
AlwI GGATC 2 cut(s) 250, 1304
Ama87I CYCGRG 1 cut(s) 1135
AoxI GGCC 1 cut(s) 46
ApeKI GCWGC 2 cut(s) 398, 1043
ApoI RAATTY 4 cut(s) 98, 550, 674, 1082
Asp700I GAANNNNTTC 1 cut(s) 155
AspS9I GGNCC 1 cut(s) 1163
AsuC2I CCSGG 1 cut(s) 772
AsuHPI GGTGA 2 cut(s) 416, 760
AsuII TTCGAA 1 cut(s) 617
AvaI CYCGRG 1 cut(s) 1135
AvaII GGWCC 1 cut(s) 1163
AxyI CCTNAGG 1 cut(s) 1233
BalI TGGCCA 1 cut(s) 48
BanII GRGCYC 1 cut(s) 41
BbsI GAAGAC 4 cut(s) 148, 249, 406, 626
Bbv12I GWGCWC 1 cut(s) 463
BbvI GCAGC 2 cut(s) 410, 1030
BccI CCATC 4 cut(s) 173, 197, 434, 1285
BceAI ACGGC 1 cut(s) 1077
BciT130I CCWGG 1 cut(s) 1224
BclI TGATCA 2 cut(s) 715, 900
BcnI CCSGG 1 cut(s) 772
BcoDI GTCTC 3 cut(s) 132, 1185, 1270
BcuI ACTAGT 1 cut(s) 1055
BfaI CTAG 5 cut(s) 26, 390, 434, 1056, 1280
BfmI CTRYAG 1 cut(s) 690
BfrI CTTAAG 1 cut(s) 146
BglI GCCNNNNNGGC 1 cut(s) 45
BisI GCNGC 2 cut(s) 399, 1044
BlsI GCNGC 2 cut(s) 400, 1045
BmcAI AGTACT 2 cut(s) 53, 688
Bme1390I CCNGG 2 cut(s) 772, 1224
Bme18I GGWCC 1 cut(s) 1163
BmeRI GACNNNNNGTC 1 cut(s) 316
BmeT110I CYCGRG 1 cut(s) 1135
BmgT120I GGNCC 1 cut(s) 1163
BmiI GGNNCC 1 cut(s) 1221
BmrFI CCNGG 2 cut(s) 772, 1224
BmsI GCATC 4 cut(s) 109, 655, 909, 1109
BoxI GACNNNNGTC 1 cut(s) 526
BpiI GAAGAC 4 cut(s) 148, 249, 406, 626
Bpu14I TTCGAA 1 cut(s) 617
BpuEI CTTGAG 1 cut(s) 326
BpuMI CCSGG 1 cut(s) 772
BsaJI CCNNGG 2 cut(s) 923, 1344
BsaXI ACNNNNNCTCC 2 cut(s) 1163, 1193
Bsc4I CCNNNNNNNGG 1 cut(s) 1202
Bse1I ACTGG 3 cut(s) 32, 49, 298
Bse21I CCTNAGG 1 cut(s) 1233
Bse3DI GCAATG 3 cut(s) 140, 400, 852
BseBI CCWGG 1 cut(s) 1224
BseDI CCNNGG 2 cut(s) 923, 1344
BseGI GGATG 3 cut(s) 780, 1100, 1192
BseLI CCNNNNNNNGG 1 cut(s) 1202
BseMI GCAATG 3 cut(s) 140, 400, 852
BseMII CTCAG 1 cut(s) 1247
BseNI ACTGG 3 cut(s) 32, 49, 298
BseRI GAGGAG 2 cut(s) 172, 908
BseXI GCAGC 2 cut(s) 410, 1030
BshFI GGCC 1 cut(s) 48
BsiHKAI GWGCWC 1 cut(s) 463
BsiHKCI CYCGRG 1 cut(s) 1135
BsiSI CCGG 1 cut(s) 771
BslI CCNNNNNNNGG 1 cut(s) 1202
BsmAI GTCTC 3 cut(s) 132, 1185, 1270
BsnI GGCC 1 cut(s) 48
BsoBI CYCGRG 1 cut(s) 1135
Bsp119I TTCGAA 1 cut(s) 617
Bsp1286I GDGCHC 2 cut(s) 41, 463
Bsp1407I TGTACA 2 cut(s) 798, 839
Bsp143I GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
Bsp19I CCATGG 1 cut(s) 923
BspACI CCGC 2 cut(s) 526, 986
BspANI GGCC 1 cut(s) 48
BspCNI CTCAG 1 cut(s) 1246
BspLI GGNNCC 1 cut(s) 1221
BspPI GGATC 2 cut(s) 250, 1304
BspT104I TTCGAA 1 cut(s) 617
BspTI CTTAAG 1 cut(s) 146
BsrDI GCAATG 3 cut(s) 140, 400, 852
BsrGI TGTACA 2 cut(s) 798, 839
BsrI ACTGG 3 cut(s) 32, 49, 298
BssECI CCNNGG 2 cut(s) 923, 1344
BssMI GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
BssT1I CCWWGG 2 cut(s) 923, 1344
Bst2UI CCWGG 1 cut(s) 1224
Bst4CI ACNGT 1 cut(s) 798
Bst6I CTCTTC 2 cut(s) 536, 1022
BstAFI CTTAAG 1 cut(s) 146
BstAUI TGTACA 2 cut(s) 798, 839
BstBI TTCGAA 1 cut(s) 617
BstC8I GCNNGC 1 cut(s) 583
BstDEI CTNAG 2 cut(s) 564, 1233
BstDSI CCRYGG 1 cut(s) 923
BstF5I GGATG 3 cut(s) 780, 1100, 1192
BstKTI GATC 6 cut(s) 258, 640, 718, 780, 903, 1312
BstMAI GTCTC 3 cut(s) 132, 1185, 1270
BstMBI GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
BstMWI GCNNNNNNNGC 1 cut(s) 45
BstNI CCWGG 1 cut(s) 1224
BstNSI RCATGY 2 cut(s) 585, 805
BstPAI GACNNNNGTC 1 cut(s) 526
BstSCI CCNGG 2 cut(s) 770, 1222
BstSFI CTRYAG 1 cut(s) 690
BstV1I GCAGC 2 cut(s) 410, 1030
BstV2I GAAGAC 4 cut(s) 148, 249, 406, 626
BstX2I RGATCY 1 cut(s) 1309
BstYI RGATCY 1 cut(s) 1309
Bsu36I CCTNAGG 1 cut(s) 1233
BsuRI GGCC 1 cut(s) 48
BtgI CCRYGG 1 cut(s) 923
BtgZI GCGATG 1 cut(s) 1103
BtsCI GGATG 3 cut(s) 780, 1100, 1192
BtsI GCAGTG 1 cut(s) 67
BtsIMutI CAGTG 2 cut(s) 39, 67
Cac8I GCNNGC 1 cut(s) 583
Cfr13I GGNCC 1 cut(s) 1163
Csp6I GTAC 6 cut(s) 52, 382, 687, 799, 840, 953
CviQI GTAC 6 cut(s) 52, 382, 687, 799, 840, 953
DdeI CTNAG 2 cut(s) 564, 1233
DpnI GATC 6 cut(s) 257, 639, 717, 779, 902, 1311
DpnII GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
DrdI GACNNNNNNGTC 1 cut(s) 1355
DriI GACNNNNNGTC 1 cut(s) 316
DseDI GACNNNNNNGTC 1 cut(s) 1355
EaeI YGGCCR 1 cut(s) 46
Eam1104I CTCTTC 2 cut(s) 536, 1022
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 2 cut(s) 536, 1022
Eco130I CCWWGG 2 cut(s) 923, 1344
Eco24I GRGCYC 1 cut(s) 41
Eco32I GATATC 1 cut(s) 341
Eco47I GGWCC 1 cut(s) 1163
Eco57I CTGAAG 1 cut(s) 40
Eco81I CCTNAGG 1 cut(s) 1233
Eco88I CYCGRG 1 cut(s) 1135
EcoRII CCWGG 1 cut(s) 1222
EcoRV GATATC 1 cut(s) 341
EcoT14I CCWWGG 2 cut(s) 923, 1344
EcoT22I ATGCAT 1 cut(s) 1334
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 2 cut(s) 923, 1344
FalI AAGNNNNNCTT 4 cut(s) 140, 172, 222, 254
FauNDI CATATG 1 cut(s) 292
FbaI TGATCA 2 cut(s) 715, 900
Fnu4HI GCNGC 2 cut(s) 399, 1044
FokI GGATG 3 cut(s) 787, 1087, 1179
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 2 cut(s) 399, 1044
FspBI CTAG 5 cut(s) 26, 390, 434, 1056, 1280
GluI GCNGC 2 cut(s) 399, 1044
HaeIII GGCC 1 cut(s) 48
HapII CCGG 1 cut(s) 771
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 7 cut(s) 106, 125, 287, 533, 751, 1364, 1375
HpaII CCGG 1 cut(s) 771
HphI GGTGA 2 cut(s) 416, 760
Hpy166II GTNNAC 2 cut(s) 1078, 1229
Hpy188I TCNGA 4 cut(s) 532, 598, 788, 1380
Hpy188III TCNNGA 6 cut(s) 10, 305, 519, 713, 733, 1288
Hpy8I GTNNAC 2 cut(s) 1078, 1229
HpyAV CCTTC 7 cut(s) 14, 216, 279, 504, 525, 715, 1294
HpyCH4III ACNGT 1 cut(s) 798
HpyCH4IV ACGT 2 cut(s) 153, 249
HpyCH4V TGCA 7 cut(s) 398, 581, 585, 668, 805, 949, 1332
HpyF10VI GCNNNNNNNGC 1 cut(s) 45
HpyF3I CTNAG 2 cut(s) 564, 1233
HpySE526I ACGT 2 cut(s) 153, 249
Ksp22I TGATCA 2 cut(s) 715, 900
Kzo9I GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
LmnI GCTCC 1 cut(s) 1171
Lsp1109I GCAGC 2 cut(s) 410, 1030
LweI GCATC 4 cut(s) 109, 655, 909, 1109
MaeI CTAG 5 cut(s) 26, 390, 434, 1056, 1280
MaeII ACGT 2 cut(s) 153, 249
MaeIII GTNAC 2 cut(s) 559, 748
MalI GATC 6 cut(s) 257, 639, 717, 779, 902, 1311
MboI GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
MfeI CAATTG 2 cut(s) 669, 888
MflI RGATCY 1 cut(s) 1309
MhlI GDGCHC 2 cut(s) 41, 463
MlsI TGGCCA 1 cut(s) 48
MluNI TGGCCA 1 cut(s) 48
MlyI GAGTC 3 cut(s) 134, 745, 1358
MmeI TCCRAC 2 cut(s) 297, 1392
Mox20I TGGCCA 1 cut(s) 48
Mph1103I ATGCAT 1 cut(s) 1334
MroXI GAANNNNTTC 1 cut(s) 155
MscI TGGCCA 1 cut(s) 48
MseI TTAA 6 cut(s) 147, 506, 968, 1200, 1322, 1393
MslI CAYNNNNRTG 2 cut(s) 580, 773
Msp20I TGGCCA 1 cut(s) 48
MspA1I CMGCKG 2 cut(s) 401, 526
MspCI CTTAAG 1 cut(s) 146
MspI CCGG 1 cut(s) 771
MspR9I CCNGG 2 cut(s) 772, 1224
MunI CAATTG 2 cut(s) 669, 888
MvaI CCWGG 1 cut(s) 1224
MwoI GCNNNNNNNGC 1 cut(s) 45
NciI CCSGG 1 cut(s) 772
NcoI CCATGG 1 cut(s) 923
NdeI CATATG 1 cut(s) 292
NdeII GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
NlaIV GGNNCC 1 cut(s) 1221
NmeAIII GCCGAG 1 cut(s) 148
NmuCI GTSAC 2 cut(s) 559, 748
NsiI ATGCAT 1 cut(s) 1334
NspI RCATGY 2 cut(s) 585, 805
NspV TTCGAA 1 cut(s) 617
PaeI GCATGC 1 cut(s) 585
PaeR7I CTCGAG 1 cut(s) 1135
PdmI GAANNNNTTC 1 cut(s) 155
PfeI GAWTC 4 cut(s) 106, 287, 533, 1375
PkrI GCNGC 2 cut(s) 400, 1045
PleI GAGTC 3 cut(s) 133, 745, 1358
PpsI GAGTC 3 cut(s) 133, 745, 1358
PshAI GACNNNNGTC 1 cut(s) 526
Psp6I CCWGG 1 cut(s) 1222
PspGI CCWGG 1 cut(s) 1222
PspN4I GGNNCC 1 cut(s) 1221
PspPI GGNCC 1 cut(s) 1163
PspXI VCTCGAGB 1 cut(s) 1135
PsuI RGATCY 1 cut(s) 1309
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 6 cut(s) 53, 383, 688, 800, 841, 954
RsaNI GTAC 6 cut(s) 52, 382, 687, 799, 840, 953
RseI CAYNNNNRTG 2 cut(s) 580, 773
SaqAI TTAA 6 cut(s) 147, 506, 968, 1200, 1322, 1393
SatI GCNGC 2 cut(s) 399, 1044
Sau3AI GATC 6 cut(s) 255, 637, 715, 777, 900, 1309
Sau96I GGNCC 1 cut(s) 1163
ScaI AGTACT 2 cut(s) 53, 688
SchI GAGTC 3 cut(s) 134, 745, 1358
ScrFI CCNGG 2 cut(s) 772, 1224
SduI GDGCHC 2 cut(s) 41, 463
SfaNI GCATC 4 cut(s) 109, 655, 909, 1109
SfcI CTRYAG 1 cut(s) 690
Sfr274I CTCGAG 1 cut(s) 1135
SfuI TTCGAA 1 cut(s) 617
SinI GGWCC 1 cut(s) 1163
SlaI CTCGAG 1 cut(s) 1135
SmiMI CAYNNNNRTG 2 cut(s) 580, 773
SmlI CTYRAG 3 cut(s) 146, 305, 1135
SmoI CTYRAG 3 cut(s) 146, 305, 1135
SpeI ACTAGT 1 cut(s) 1055
SphI GCATGC 1 cut(s) 585
SsiI CCGC 2 cut(s) 526, 986
SspMI CTAG 5 cut(s) 26, 390, 434, 1056, 1280
StyD4I CCNGG 2 cut(s) 770, 1222
StyI CCWWGG 2 cut(s) 923, 1344
TaaI ACNGT 1 cut(s) 798
TaiI ACGT 2 cut(s) 156, 252
TaqI TCGA 6 cut(s) 228, 536, 617, 656, 793, 1136
TatI WGTACW 4 cut(s) 51, 686, 798, 839
TfiI GAWTC 4 cut(s) 106, 287, 533, 1375
Tru1I TTAA 6 cut(s) 147, 506, 968, 1200, 1322, 1393
Tru9I TTAA 6 cut(s) 147, 506, 968, 1200, 1322, 1393
TscAI CASTG 2 cut(s) 39, 67
TseFI GTSAC 2 cut(s) 559, 748
TseI GCWGC 2 cut(s) 398, 1043
Tsp45I GTSAC 2 cut(s) 559, 748
TspDTI ATGAA 2 cut(s) 359, 1106
TspRI CASTG 2 cut(s) 39, 67
Vha464I CTTAAG 1 cut(s) 146
VpaK11BI GGWCC 1 cut(s) 1163
XapI RAATTY 4 cut(s) 98, 550, 674, 1082
XceI RCATGY 2 cut(s) 585, 805
XhoI CTCGAG 1 cut(s) 1135
XmnI GAANNNNTTC 1 cut(s) 155
XspI CTAG 5 cut(s) 26, 390, 434, 1056, 1280
ZrmI AGTACT 2 cut(s) 53, 688
Zsp2I ATGCAT 1 cut(s) 1334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.