Rorug06G0243300

Wax ester synthase-like Acyl-CoA acyltransferase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000634
Physical Location & Seq
Forward (+)
38712673 .. 38716106
3434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0243300.1

Sequence Viewer

Length: 1371 bp
ATGGGTTTCTCTAACCTCACCCTGCTCCTCACCCTCGCCCTCCTCATCTCAACCCTCACCGCCCCCTCCTCCGCCGCCACCTTCAACTGCACTACCCTCTCCGCCAATTCCACCTGCCAATCCCTCATCGACTTCGCCCCCACAAACGCCACCACTCTCAACGCCGTCAAGACCCTCTTCAACATCACCCACCTCCGCACCTTACTCGGAGCCAACAACCTCAACCTCTCGACCCGACCCAGCCAACCCGTCACCGCCAACCAGAAGCTCCGAATCCCCTTCTCCTGCCGCTGCCTCAACGGCTCCGGCGTCTCCGACCGCCGCCCCCAGCACATCGTCAAGGCCGGCGACGGCCTCTACGACATAGCCAGCTTGTTCTCGAGCGTGGTCACGTTCGAGGAGATCGCCCGGGTCAATGGCATACCCGACCCGAATCAGATCGAGGTCGGGCAGAAGCTGTGGATCCCACTGCCGTGTAGCTGCGACAAAGTGGACGGCAAGGATGTAGTGCATTACGGACACAAGGTGGACCCTGGGAGCTCGGTGCAGGGGATCGCCGATGAATATGGGACCACCCAGGAGACGCTCCTTCGGATCAATGGAATGACTGACCCCACTAAACTCATGGCTGATCAGGTCCTTGATGTTCCTCTCAGAGCTTGTGCATCGTCAGTACGAAATGACTCGATAGATTCCCCGTTACTTGTTCCTAATAACACCTATGTCTTCACTGCTTACAATTGTGTGAAGTGCCAATGTAGTTCTGCGAACAACTGGACATTACAATGCGAGCCATCAATTCTTAATTCAACTCTCTGGTCGAAATGCCCTTCGATGCAATGCCAAGATTCAAATCAATTATACATTGGCAACACCACATCTTCCTCCTGCAATCAAACAACTTGTGCCTATGGGGGTTACAATGCCAAAACCATTCTTACAAATCTGGTAGCGCAGTCTAACTGTTCAATAGTTCTGAGCATAATTGCATATGGTCCTGGGCCATTCTCTCAGCCATGGCATTGTCACCATAAAACATCTCATCAAATTATTCTCAGGGCCAGCCGGGCAGATATCTTTTCACTAGGCATCATATTGTTGGACACCTGTAATAACTGTGTTCATCAATTCAAACTGATATCTGTGCCTTTCATTGGCCTACAGCTCCTAGCATCGCTTCAAAGATGGGATTACACAGCTGGGGAGGATGATGAAGCAGACTCATATGGTGCAATTCTTCTGTACATCCTTAATATACAAATTAGGGGCATCTCCAACTCTAGTGTCAAGTCCAGCATCTCCATCCCAATAGAAAAGGGAGTCAAAATGACTCTGAGTCGAAAGCTTAGTCATTTTGACCAAGTTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

456

Amino Acids

49.55

Weight (kDa)

7.07

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LysM PF01476 111 - 156 1.1e-10 LysM domain
LysM PF01476 174 - 217 1.4e-08 LysM domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 122
Acc36I ACCTGC 1 cut(s) 122
AciI CCGC 9 cut(s) 60, 72, 75, 102, 196, 255, 289, 319, 322
AclWI GGATC 4 cut(s) 457, 470, 560, 602
AcyI GRCGYC 1 cut(s) 309
AdeI CACNNNGTG 1 cut(s) 526
AfaI GTAC 2 cut(s) 675, 1244
AfiI CCNNNNNNNGG 1 cut(s) 1154
AgsI TTSAA 7 cut(s) 85, 181, 810, 852, 969, 1132, 1181
AhdI GACNNNNNGTC 1 cut(s) 1335
AjnI CCWGG 3 cut(s) 532, 576, 997
AleI CACNNNNGTG 1 cut(s) 472
AluBI AGCT 9 cut(s) 268, 372, 457, 480, 540, 659, 1165, 1199, 1345
AluI AGCT 9 cut(s) 268, 372, 457, 480, 540, 659, 1165, 1199, 1345
Alw21I GWGCWC 1 cut(s) 542
Alw26I GTCTC 2 cut(s) 316, 575
AlwI GGATC 4 cut(s) 457, 470, 560, 602
AlwNI CAGNNNCTG 1 cut(s) 457
Ama87I CYCGRG 2 cut(s) 379, 408
AoxI GGCC 5 cut(s) 342, 352, 1001, 1059, 1156
ApeKI GCWGC 2 cut(s) 291, 480
ArsI GACNNNNNNTTYG 2 cut(s) 1333, 1365
AspLEI GCGC 1 cut(s) 955
AspS9I GGNCC 6 cut(s) 529, 570, 637, 995, 1001, 1059
AsuC2I CCSGG 3 cut(s) 409, 410, 1067
AsuHPI GGTGA 6 cut(s) 10, 22, 49, 178, 244, 1019
AvaI CYCGRG 2 cut(s) 379, 408
AvaII GGWCC 4 cut(s) 529, 570, 637, 995
BamHI GGATCC 1 cut(s) 462
BanII GRGCYC 1 cut(s) 542
BbsI GAAGAC 1 cut(s) 718
Bbv12I GWGCWC 1 cut(s) 542
BbvI GCAGC 2 cut(s) 278, 467
BccI CCATC 3 cut(s) 802, 1179, 1310
BceAI ACGGC 5 cut(s) 149, 316, 367, 457, 511
BcgI CGANNNNNNTGC 2 cut(s) 187, 221
BciT130I CCWGG 3 cut(s) 534, 578, 999
BclI TGATCA 1 cut(s) 631
BcnI CCSGG 3 cut(s) 409, 410, 1067
BcoDI GTCTC 2 cut(s) 316, 575
BfaI CTAG 3 cut(s) 1085, 1169, 1281
BfmI CTRYAG 1 cut(s) 1160
BfuAI ACCTGC 1 cut(s) 122
BglI GCCNNNNNGGC 2 cut(s) 300, 1067
BisI GCNGC 5 cut(s) 75, 289, 292, 322, 481
BlsI GCNGC 5 cut(s) 76, 290, 293, 323, 482
Bme1390I CCNGG 6 cut(s) 409, 410, 534, 578, 999, 1067
Bme18I GGWCC 4 cut(s) 529, 570, 637, 995
BmeRI GACNNNNNGTC 1 cut(s) 1335
BmeT110I CYCGRG 2 cut(s) 379, 408
BmgT120I GGNCC 6 cut(s) 529, 570, 637, 995, 1001, 1059
BmiI GGNNCC 5 cut(s) 211, 304, 464, 531, 571
BmrFI CCNGG 6 cut(s) 409, 410, 534, 578, 999, 1067
BmsI GCATC 6 cut(s) 674, 825, 1098, 1181, 1278, 1305
BpiI GAAGAC 1 cut(s) 718
BpuMI CCSGG 3 cut(s) 409, 410, 1067
BsaBI GATNNNNATC 1 cut(s) 852
BsaHI GRCGYC 1 cut(s) 309
BsaJI CCNNGG 6 cut(s) 408, 532, 533, 576, 998, 1016
Bsc4I CCNNNNNNNGG 1 cut(s) 1154
Bse118I RCCGGY 1 cut(s) 344
Bse1I ACTGG 1 cut(s) 779
Bse3DI GCAATG 1 cut(s) 845
Bse8I GATNNNNATC 1 cut(s) 852
BseBI CCWGG 3 cut(s) 534, 578, 999
BseDI CCNNGG 6 cut(s) 408, 532, 533, 576, 998, 1016
BseGI GGATG 4 cut(s) 508, 1213, 1245, 1302
BseJI GATNNNNATC 1 cut(s) 852
BseLI CCNNNNNNNGG 1 cut(s) 1154
BseMI GCAATG 1 cut(s) 845
BseMII CTCAG 5 cut(s) 667, 968, 1025, 1069, 1325
BseNI ACTGG 1 cut(s) 779
BseRI GAGGAG 4 cut(s) 17, 32, 58, 413
BseXI GCAGC 2 cut(s) 278, 467
BseYI CCCAGC 3 cut(s) 239, 327, 1199
BsgI GTGCAG 2 cut(s) 73, 566
Bsh1285I CGRYCG 1 cut(s) 319
BshFI GGCC 5 cut(s) 344, 354, 1003, 1061, 1158
BsiEI CGRYCG 1 cut(s) 319
BsiHKAI GWGCWC 1 cut(s) 542
BsiHKCI CYCGRG 2 cut(s) 379, 408
BsiSI CCGG 4 cut(s) 306, 345, 409, 1066
BslFI GGGAC 1 cut(s) 583
BslI CCNNNNNNNGG 1 cut(s) 1154
BsmAI GTCTC 2 cut(s) 316, 575
BsmBI CGTCTC 2 cut(s) 316, 575
BsmFI GGGAC 1 cut(s) 583
BsnI GGCC 5 cut(s) 344, 354, 1003, 1061, 1158
BsoBI CYCGRG 2 cut(s) 379, 408
Bsp1286I GDGCHC 1 cut(s) 542
Bsp1407I TGTACA 1 cut(s) 1242
Bsp143I GATC 6 cut(s) 402, 438, 462, 552, 594, 631
Bsp19I CCATGG 1 cut(s) 1016
BspACI CCGC 9 cut(s) 60, 72, 75, 102, 196, 255, 289, 319, 322
BspANI GGCC 5 cut(s) 344, 354, 1003, 1061, 1158
BspCNI CTCAG 5 cut(s) 666, 969, 1024, 1068, 1326
BspLI GGNNCC 5 cut(s) 211, 304, 464, 531, 571
BspMI ACCTGC 1 cut(s) 122
BspPI GGATC 4 cut(s) 457, 470, 560, 602
BsrDI GCAATG 1 cut(s) 845
BsrFI RCCGGY 1 cut(s) 344
BsrGI TGTACA 1 cut(s) 1242
BsrI ACTGG 1 cut(s) 779
BssAI RCCGGY 1 cut(s) 344
BssECI CCNNGG 6 cut(s) 408, 532, 533, 576, 998, 1016
BssMI GATC 6 cut(s) 402, 438, 462, 552, 594, 631
BssNI GRCGYC 1 cut(s) 309
BssT1I CCWWGG 1 cut(s) 1016
Bst2UI CCWGG 3 cut(s) 534, 578, 999
Bst4CI ACNGT 2 cut(s) 965, 1118
Bst6I CTCTTC 1 cut(s) 182
BstACI GRCGYC 1 cut(s) 309
BstAUI TGTACA 1 cut(s) 1242
BstC8I GCNNGC 4 cut(s) 346, 370, 791, 1063
BstDEI CTNAG 6 cut(s) 653, 977, 1011, 1055, 1334, 1346
BstDSI CCRYGG 1 cut(s) 1016
BstF5I GGATG 4 cut(s) 508, 1213, 1245, 1302
BstHHI GCGC 1 cut(s) 955
BstKTI GATC 6 cut(s) 405, 441, 465, 555, 597, 634
BstMAI GTCTC 2 cut(s) 316, 575
BstMBI GATC 6 cut(s) 402, 438, 462, 552, 594, 631
BstMCI CGRYCG 1 cut(s) 319
BstMWI GCNNNNNNNGC 2 cut(s) 300, 1067
BstNI CCWGG 3 cut(s) 534, 578, 999
BstSCI CCNGG 6 cut(s) 407, 408, 532, 576, 997, 1065
BstSFI CTRYAG 1 cut(s) 1160
BstV1I GCAGC 2 cut(s) 278, 467
BstV2I GAAGAC 1 cut(s) 718
BstX2I RGATCY 1 cut(s) 462
BstYI RGATCY 1 cut(s) 462
BsuRI GGCC 5 cut(s) 344, 354, 1003, 1061, 1158
BtgI CCRYGG 1 cut(s) 1016
BtgZI GCGATG 1 cut(s) 1158
BtsCI GGATG 4 cut(s) 508, 1213, 1245, 1302
BtsI GCAGTG 2 cut(s) 467, 729
BtsIMutI CAGTG 2 cut(s) 467, 729
BveI ACCTGC 1 cut(s) 122
Cac8I GCNNGC 4 cut(s) 346, 370, 791, 1063
CaiI CAGNNNCTG 1 cut(s) 457
CfoI GCGC 1 cut(s) 955
Cfr10I RCCGGY 1 cut(s) 344
Cfr13I GGNCC 6 cut(s) 529, 570, 637, 995, 1001, 1059
Cfr9I CCCGGG 1 cut(s) 408
CseI GACGC 2 cut(s) 298, 592
Csp6I GTAC 2 cut(s) 674, 1243
CviAII CATG 2 cut(s) 625, 1017
CviQI GTAC 2 cut(s) 674, 1243
DdeI CTNAG 6 cut(s) 653, 977, 1011, 1055, 1334, 1346
DpnI GATC 6 cut(s) 404, 440, 464, 554, 596, 633
DpnII GATC 6 cut(s) 402, 438, 462, 552, 594, 631
DraIII CACNNNGTG 1 cut(s) 526
DriI GACNNNNNGTC 1 cut(s) 1335
Eam1104I CTCTTC 1 cut(s) 182
Eam1105I GACNNNNNGTC 1 cut(s) 1335
EarI CTCTTC 1 cut(s) 182
EciI GGCGGA 2 cut(s) 61, 91
Ecl136II GAGCTC 1 cut(s) 540
Eco130I CCWWGG 1 cut(s) 1016
Eco24I GRGCYC 1 cut(s) 542
Eco32I GATATC 2 cut(s) 1075, 1140
Eco47I GGWCC 4 cut(s) 529, 570, 637, 995
Eco53kI GAGCTC 1 cut(s) 540
Eco88I CYCGRG 2 cut(s) 379, 408
EcoICRI GAGCTC 1 cut(s) 540
EcoO109I RGGNCCY 1 cut(s) 637
EcoRII CCWGG 3 cut(s) 532, 576, 997
EcoRV GATATC 2 cut(s) 1075, 1140
EcoT14I CCWWGG 1 cut(s) 1016
EcoT38I GRGCYC 1 cut(s) 542
ErhI CCWWGG 1 cut(s) 1016
Esp3I CGTCTC 2 cut(s) 316, 575
FaeI CATG 2 cut(s) 628, 1020
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FaqI GGGAC 1 cut(s) 583
FatI CATG 2 cut(s) 624, 1016
FauNDI CATATG 2 cut(s) 991, 1225
FbaI TGATCA 1 cut(s) 631
Fnu4HI GCNGC 5 cut(s) 75, 289, 292, 322, 481
FokI GGATG 4 cut(s) 515, 1220, 1232, 1289
FriOI GRGCYC 1 cut(s) 542
Fsp4HI GCNGC 5 cut(s) 75, 289, 292, 322, 481
FspBI CTAG 3 cut(s) 1085, 1169, 1281
GlaI GCGC 1 cut(s) 954
GluI GCNGC 5 cut(s) 75, 289, 292, 322, 481
GsaI CCCAGC 3 cut(s) 243, 331, 1203
HaeIII GGCC 5 cut(s) 344, 354, 1003, 1061, 1158
HapII CCGG 4 cut(s) 306, 345, 409, 1066
HgaI GACGC 2 cut(s) 298, 592
HhaI GCGC 1 cut(s) 955
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 2 cut(s) 628, 1020
Hin6I GCGC 1 cut(s) 953
HinP1I GCGC 1 cut(s) 953
HindIII AAGCTT 1 cut(s) 1343
HinfI GANTC 9 cut(s) 273, 433, 683, 692, 848, 1220, 1320, 1330, 1336
HpaII CCGG 4 cut(s) 306, 345, 409, 1066
HphI GGTGA 6 cut(s) 10, 22, 49, 178, 244, 1019
Hpy166II GTNNAC 2 cut(s) 493, 529
Hpy188I TCNGA 8 cut(s) 209, 272, 316, 438, 594, 656, 978, 1335
Hpy188III TCNNGA 3 cut(s) 169, 229, 379
Hpy8I GTNNAC 2 cut(s) 493, 529
Hpy99I CGWCG 1 cut(s) 353
HpyAV CCTTC 4 cut(s) 91, 289, 599, 840
HpyCH4III ACNGT 2 cut(s) 965, 1118
HpyCH4IV ACGT 1 cut(s) 392
HpyCH4V TGCA 8 cut(s) 90, 511, 547, 665, 838, 891, 989, 1232
HpyF10VI GCNNNNNNNGC 2 cut(s) 300, 1067
HpyF3I CTNAG 6 cut(s) 653, 977, 1011, 1055, 1334, 1346
HpySE526I ACGT 1 cut(s) 392
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 2 cut(s) 628, 1020
HspAI GCGC 1 cut(s) 953
KroI GCCGGC 1 cut(s) 344
KroNI GCCGGC 1 cut(s) 346
Ksp22I TGATCA 1 cut(s) 631
Kzo9I GATC 6 cut(s) 402, 438, 462, 552, 594, 631
LmnI GCTCC 7 cut(s) 30, 209, 273, 308, 537, 591, 1170
Lsp1109I GCAGC 2 cut(s) 278, 467
LweI GCATC 6 cut(s) 674, 825, 1098, 1181, 1278, 1305
MaeI CTAG 3 cut(s) 1085, 1169, 1281
MaeII ACGT 1 cut(s) 392
MaeIII GTNAC 5 cut(s) 250, 388, 699, 917, 1025
MalI GATC 6 cut(s) 404, 440, 464, 554, 596, 633
MboI GATC 6 cut(s) 402, 438, 462, 552, 594, 631
MboII GAAGA 4 cut(s) 169, 718, 873, 1229
MfeI CAATTG 1 cut(s) 739
MflI RGATCY 1 cut(s) 462
MhlI GDGCHC 1 cut(s) 542
MlyI GAGTC 5 cut(s) 677, 1214, 1324, 1329, 1345
MmeI TCCRAC 3 cut(s) 339, 1080, 1299
MroNI GCCGGC 1 cut(s) 344
MseI TTAA 2 cut(s) 804, 1251
MslI CAYNNNNRTG 2 cut(s) 472, 784
MspA1I CMGCKG 2 cut(s) 291, 1199
MspI CCGG 4 cut(s) 306, 345, 409, 1066
MspR9I CCNGG 6 cut(s) 409, 410, 534, 578, 999, 1067
MunI CAATTG 1 cut(s) 739
MvaI CCWGG 3 cut(s) 534, 578, 999
MwoI GCNNNNNNNGC 2 cut(s) 300, 1067
NaeI GCCGGC 1 cut(s) 346
NciI CCSGG 3 cut(s) 409, 410, 1067
NcoI CCATGG 1 cut(s) 1016
NdeI CATATG 2 cut(s) 991, 1225
NdeII GATC 6 cut(s) 402, 438, 462, 552, 594, 631
NgoMIV GCCGGC 1 cut(s) 344
NlaIII CATG 2 cut(s) 628, 1020
NlaIV GGNNCC 5 cut(s) 211, 304, 464, 531, 571
NmuCI GTSAC 3 cut(s) 250, 388, 1025
OliI CACNNNNGTG 1 cut(s) 472
PaeR7I CTCGAG 1 cut(s) 379
PaqCI CACCTGC 1 cut(s) 122
PasI CCCWGGG 1 cut(s) 533
PcsI WCGNNNNNNNCGW 2 cut(s) 306, 357
PdiI GCCGGC 1 cut(s) 346
PfeI GAWTC 4 cut(s) 273, 433, 692, 848
PkrI GCNGC 5 cut(s) 76, 290, 293, 323, 482
PleI GAGTC 5 cut(s) 677, 1214, 1324, 1328, 1344
PpsI GAGTC 5 cut(s) 677, 1214, 1324, 1328, 1344
PpuMI RGGWCCY 1 cut(s) 637
Psp124BI GAGCTC 1 cut(s) 542
Psp5II RGGWCCY 1 cut(s) 637
Psp6I CCWGG 3 cut(s) 532, 576, 997
PspFI CCCAGC 3 cut(s) 239, 327, 1199
PspGI CCWGG 3 cut(s) 532, 576, 997
PspN4I GGNNCC 5 cut(s) 211, 304, 464, 531, 571
PspPI GGNCC 6 cut(s) 529, 570, 637, 995, 1001, 1059
PspPPI RGGWCCY 1 cut(s) 637
PstNI CAGNNNCTG 1 cut(s) 457
PsuI RGATCY 1 cut(s) 462
PvuII CAGCTG 1 cut(s) 1199
RsaI GTAC 2 cut(s) 675, 1244
RsaNI GTAC 2 cut(s) 674, 1243
RseI CAYNNNNRTG 2 cut(s) 472, 784
SacI GAGCTC 1 cut(s) 542
SaqAI TTAA 2 cut(s) 804, 1251
SatI GCNGC 5 cut(s) 75, 289, 292, 322, 481
Sau3AI GATC 6 cut(s) 402, 438, 462, 552, 594, 631
Sau96I GGNCC 6 cut(s) 529, 570, 637, 995, 1001, 1059
SchI GAGTC 5 cut(s) 677, 1214, 1324, 1329, 1345
ScrFI CCNGG 6 cut(s) 409, 410, 534, 578, 999, 1067
SduI GDGCHC 1 cut(s) 542
SfaNI GCATC 6 cut(s) 674, 825, 1098, 1181, 1278, 1305
SfcI CTRYAG 1 cut(s) 1160
Sfr274I CTCGAG 1 cut(s) 379
SinI GGWCC 4 cut(s) 529, 570, 637, 995
SlaI CTCGAG 1 cut(s) 379
SmaI CCCGGG 1 cut(s) 410
SmiMI CAYNNNNRTG 2 cut(s) 472, 784
SmlI CTYRAG 1 cut(s) 379
SmoI CTYRAG 1 cut(s) 379
SsiI CCGC 9 cut(s) 60, 72, 75, 102, 196, 255, 289, 319, 322
SspMI CTAG 3 cut(s) 1085, 1169, 1281
SstI GAGCTC 1 cut(s) 542
StyD4I CCNGG 6 cut(s) 407, 408, 532, 576, 997, 1065
StyI CCWWGG 1 cut(s) 1016
TaaI ACNGT 2 cut(s) 965, 1118
TaiI ACGT 1 cut(s) 395
TaqI TCGA 9 cut(s) 129, 230, 380, 396, 441, 686, 821, 833, 1339
TatI WGTACW 1 cut(s) 1242
TauI GCSGC 3 cut(s) 77, 291, 324
TfiI GAWTC 4 cut(s) 273, 433, 692, 848
Tru1I TTAA 2 cut(s) 804, 1251
Tru9I TTAA 2 cut(s) 804, 1251
TscAI CASTG 2 cut(s) 474, 736
TseFI GTSAC 3 cut(s) 250, 388, 1025
TseI GCWGC 2 cut(s) 291, 480
Tsp45I GTSAC 3 cut(s) 250, 388, 1025
TspDTI ATGAA 4 cut(s) 576, 1112, 1141, 1227
TspGWI ACGGA 1 cut(s) 531
TspMI CCCGGG 1 cut(s) 408
TspRI CASTG 2 cut(s) 474, 736
VpaK11BI GGWCC 4 cut(s) 529, 570, 637, 995
XcmI CCANNNNNNNNNTGG 1 cut(s) 622
XhoI CTCGAG 1 cut(s) 379
XmaI CCCGGG 1 cut(s) 408
XspI CTAG 3 cut(s) 1085, 1169, 1281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.