RLG00000013999

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
45390433 .. 45399178
8746 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013999

Sequence Viewer

Length: 1380 bp
ATGGAGTTGCAATTTGAGGGAGAAGAAGGACTGCAGCCGGTGAGCCCTCTCGGTCAGTACTTCACTAGCTCTGTGTTATCGGTATCGAATCTTGGTGTTTTGGAAACCGAGGTTCCAATCGATGAGCTTCCAGCTATGTCGTTGCTTCAAAATGTGTTCCTCCCCATCAGCCCACGGTTCTCCTCGATCATGGTTGAGAGAAGGGGAAAGAAGCAGTGGAAAAGGGTTGAAGTGAAGCTTGAAGACCATGTTAACATCCCTATTTTCCCTTCTGGCCTATCGCCTGCATCATACGATAAGTATCTTGATGACTACATATCAAAGTTAGCAATGGAAAGAGTCGAAAGACTTCCACAACACAAACCTCTCTGGGAAATTCACATTATCAAGTACCCAACTACCGATGCAGCCGGCACTGTAATATTCAAGCTTCACCAAGCGCTTGGTGATGGCTTCTCTCTCATGGGTGCTCTTCTCTCTTGTTTACAACAAGCTGACAATCCTTCTCTTCCCCTAACCTTCCCATCAAGAAGGAGGTTGCAGCCATGGAAGAGTGAAAATTTTGTGACTAAAGTTTTTTCTTCTGTCTTCAACACCATATCGGATTTTTTAAATAGCAACTTGGAGGAAGATGATCAAACACCAATCAGATCGGGGAATGATGGAATTGAGTTCAAGCCAATTGCAGTATCAACTATGACGATTTCCCTTGATAGAATCAAACTAATCAAGAGCAGGCTCGGAGTGACGATAAATGACGTTCTTACCGCGATGATCTTCCTTGGTACTCGACTATACATCCAAGAGACGAACAGAAGTTTAAGCAAAGCAAGAGGCACAGCAATTGTATTGCTCAACACAAGGATGATGGGGAATTACACCTCAGTTCAGGAGATGATCAAACCTAATAGCAAGTTGCCATGGGGGAACCATTTGTCACTGTTGCATGTACCAATACCCAATTATAATGCACTTGACTTTGTCTGGAAGACACAGAAAATTATAAGGAGTAAAAGGCATTCTTTGGGTATTCATCTCACTGCTGGGTTCTTGGAGATTCTCAACAAATTTGGAGGCCATGAGGCAATAGCAAGATACATCCGTAACACATTGAAGAAGTCGAGCATGATAGTTTCCAATATGAATGGACCGGTGGAACAGATGTCTTTGGCAAATCATCCAGTTAAAGGCTTATACTTTTTAGTCTTTGGTTCACCTGAGGGCCCTGATGTAACAATAGTAAGTTATATGGGAAAGGTGAGGATTGCCTTCAAGATGGAAAAGGGTCTTATTGATCCACCAAAGTTCCAGTCATGCATGGAAAAGTCTTTTGAGATGATACTCGAAGCCTCGGAGAAAACTGCCGTGCAGAAGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

460

Amino Acids

51.67

Weight (kDa)

9.12

Isoelectric Point (pI)

46.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 73 - 254 2.2e-08 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 308 - 447 7.1e-33 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 966, 1004
AccII CGCG 1 cut(s) 770
AciI CCGC 1 cut(s) 768
AclWI GGATC 1 cut(s) 1289
AcsI RAATTY 3 cut(s) 375, 559, 1067
AfaI GTAC 4 cut(s) 59, 392, 787, 951
AfeI AGCGCT 1 cut(s) 441
AfiI CCNNNNNNNGG 1 cut(s) 1187
AgeI ACCGGT 1 cut(s) 1150
AgsI TTSAA 8 cut(s) 149, 230, 242, 427, 592, 676, 1114, 1273
AluBI AGCT 6 cut(s) 69, 127, 134, 238, 430, 494
AluI AGCT 6 cut(s) 69, 127, 134, 238, 430, 494
Alw21I GWGCWC 1 cut(s) 472
Alw26I GTCTC 1 cut(s) 800
AlwI GGATC 1 cut(s) 1289
Aor51HI AGCGCT 1 cut(s) 441
AoxI GGCC 3 cut(s) 274, 1075, 1222
ApaI GGGCCC 1 cut(s) 1226
ApeKI GCWGC 3 cut(s) 34, 407, 541
ApoI RAATTY 3 cut(s) 375, 559, 1067
ArsI GACNNNNNNTTYG 2 cut(s) 1295, 1327
AsiGI ACCGGT 1 cut(s) 1150
Asp700I GAANNNNTTC 1 cut(s) 348
AspLEI GCGC 1 cut(s) 442
AspS9I GGNCC 3 cut(s) 1148, 1222, 1223
AsuHPI GGTGA 5 cut(s) 52, 425, 458, 1206, 1270
AvaII GGWCC 1 cut(s) 1148
AxyI CCTNAGG 1 cut(s) 1218
BaeGI GKGCMC 1 cut(s) 1226
BaeI ACNNNNGTAYC 2 cut(s) 1087, 1120
BanII GRGCYC 2 cut(s) 47, 1226
BbsI GAAGAC 3 cut(s) 249, 580, 995
Bbv12I GWGCWC 1 cut(s) 472
BbvI GCAGC 3 cut(s) 46, 419, 553
BccI CCATC 6 cut(s) 173, 443, 532, 656, 862, 1270
BceAI ACGGC 1 cut(s) 1349
BclI TGATCA 2 cut(s) 634, 897
BcoDI GTCTC 1 cut(s) 800
BfaI CTAG 1 cut(s) 66
BfmI CTRYAG 1 cut(s) 32
BfoI RGCGCY 1 cut(s) 443
BisI GCNGC 3 cut(s) 35, 408, 542
BlsI GCNGC 3 cut(s) 36, 409, 543
BmcAI AGTACT 1 cut(s) 59
Bme18I GGWCC 1 cut(s) 1148
BmgT120I GGNCC 3 cut(s) 1148, 1222, 1223
BmiI GGNNCC 3 cut(s) 114, 929, 1224
BmsI GCATC 2 cut(s) 296, 394
BpiI GAAGAC 3 cut(s) 249, 580, 995
Bsa29I ATCGAT 1 cut(s) 120
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 6 cut(s) 108, 173, 545, 781, 920, 1350
BsaWI WCCGGW 1 cut(s) 1150
Bsc4I CCNNNNNNNGG 1 cut(s) 1187
Bse118I RCCGGY 3 cut(s) 37, 410, 1150
Bse1I ACTGG 2 cut(s) 1181, 1309
Bse21I CCTNAGG 1 cut(s) 1218
Bse3DI GCAATG 1 cut(s) 336
Bse8I GATNNNNATC 1 cut(s) 300
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 6 cut(s) 108, 173, 545, 781, 920, 1350
BseGI GGATG 5 cut(s) 255, 798, 870, 1098, 1177
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 1 cut(s) 1187
BseMI GCAATG 1 cut(s) 336
BseMII CTCAG 2 cut(s) 897, 1209
BseNI ACTGG 2 cut(s) 1181, 1309
BseRI GAGGAG 1 cut(s) 172
BseSI GKGCMC 1 cut(s) 1226
BseXI GCAGC 3 cut(s) 46, 419, 553
BseYI CCCAGC 1 cut(s) 1043
Bsh1236I CGCG 1 cut(s) 770
BshFI GGCC 3 cut(s) 276, 1077, 1224
BshTI ACCGGT 1 cut(s) 1150
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 472
BsiSI CCGG 3 cut(s) 38, 411, 1151
BslI CCNNNNNNNGG 1 cut(s) 1187
BsmAI GTCTC 1 cut(s) 800
BsmBI CGTCTC 1 cut(s) 800
BsmI GAATGC 1 cut(s) 1018
BsnI GGCC 3 cut(s) 276, 1077, 1224
Bsp120I GGGCCC 1 cut(s) 1222
Bsp1286I GDGCHC 3 cut(s) 47, 472, 1226
Bsp143I GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
Bsp19I CCATGG 2 cut(s) 545, 920
BspACI CCGC 1 cut(s) 768
BspANI GGCC 3 cut(s) 276, 1077, 1224
BspCNI CTCAG 2 cut(s) 896, 1210
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 1 cut(s) 770
BspLI GGNNCC 3 cut(s) 114, 929, 1224
BspMAI CTGCAG 1 cut(s) 36
BspPI GGATC 1 cut(s) 1289
BspQI GCTCTTC 1 cut(s) 477
BsrDI GCAATG 1 cut(s) 336
BsrFI RCCGGY 3 cut(s) 37, 410, 1150
BsrI ACTGG 2 cut(s) 1181, 1309
BssAI RCCGGY 3 cut(s) 37, 410, 1150
BssECI CCNNGG 6 cut(s) 108, 173, 545, 781, 920, 1350
BssMI GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
BssT1I CCWWGG 3 cut(s) 545, 781, 920
Bst4CI ACNGT 3 cut(s) 177, 418, 942
Bst6I CTCTTC 3 cut(s) 477, 513, 545
BstC8I GCNNGC 3 cut(s) 285, 412, 737
BstDEI CTNAG 2 cut(s) 883, 1218
BstDSI CCRYGG 3 cut(s) 173, 545, 920
BstF5I GGATG 5 cut(s) 255, 798, 870, 1098, 1177
BstFNI CGCG 1 cut(s) 770
BstH2I RGCGCY 1 cut(s) 443
BstHHI GCGC 1 cut(s) 442
BstKTI GATC 6 cut(s) 189, 637, 653, 777, 900, 1297
BstMAI GTCTC 1 cut(s) 800
BstMBI GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
BstNSI RCATGY 1 cut(s) 950
BstSFI CTRYAG 1 cut(s) 32
BstSLI GKGCMC 1 cut(s) 1226
BstUI CGCG 1 cut(s) 770
BstV1I GCAGC 3 cut(s) 46, 419, 553
BstV2I GAAGAC 3 cut(s) 249, 580, 995
BstXI CCANNNNNNTGG 1 cut(s) 443
Bsu15I ATCGAT 1 cut(s) 120
Bsu36I CCTNAGG 1 cut(s) 1218
BsuRI GGCC 3 cut(s) 276, 1077, 1224
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 3 cut(s) 173, 545, 920
BtgZI GCGATG 1 cut(s) 785
BtsCI GGATG 5 cut(s) 255, 798, 870, 1098, 1177
BtsI GCAGTG 2 cut(s) 221, 1038
BtsIMutI CAGTG 4 cut(s) 221, 414, 938, 1038
Cac8I GCNNGC 3 cut(s) 285, 412, 737
CfoI GCGC 1 cut(s) 442
Cfr10I RCCGGY 3 cut(s) 37, 410, 1150
Cfr13I GGNCC 3 cut(s) 1148, 1222, 1223
ClaI ATCGAT 1 cut(s) 120
Csp6I GTAC 4 cut(s) 58, 391, 786, 950
CspAI ACCGGT 1 cut(s) 1150
CviQI GTAC 4 cut(s) 58, 391, 786, 950
DdeI CTNAG 2 cut(s) 883, 1218
DpnI GATC 6 cut(s) 188, 636, 652, 776, 899, 1296
DpnII GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
DraI TTTAAA 1 cut(s) 612
Eam1104I CTCTTC 3 cut(s) 477, 513, 545
EarI CTCTTC 3 cut(s) 477, 513, 545
Eco130I CCWWGG 3 cut(s) 545, 781, 920
Eco24I GRGCYC 2 cut(s) 47, 1226
Eco47I GGWCC 1 cut(s) 1148
Eco47III AGCGCT 1 cut(s) 441
Eco81I CCTNAGG 1 cut(s) 1218
EcoO109I RGGNCCY 2 cut(s) 1222, 1223
EcoT14I CCWWGG 3 cut(s) 545, 781, 920
EcoT22I ATGCAT 1 cut(s) 1319
EcoT38I GRGCYC 2 cut(s) 47, 1226
ErhI CCWWGG 3 cut(s) 545, 781, 920
Esp3I CGTCTC 1 cut(s) 800
FalI AAGNNNNNCTT 4 cut(s) 222, 254, 1006, 1038
FbaI TGATCA 2 cut(s) 634, 897
Fnu4HI GCNGC 3 cut(s) 35, 408, 542
FokI GGATG 5 cut(s) 242, 785, 877, 1085, 1164
FriOI GRGCYC 2 cut(s) 47, 1226
Fsp4HI GCNGC 3 cut(s) 35, 408, 542
FspBI CTAG 1 cut(s) 66
GlaI GCGC 1 cut(s) 441
GluI GCNGC 3 cut(s) 35, 408, 542
GsaI CCCAGC 1 cut(s) 1047
HaeII RGCGCY 1 cut(s) 443
HaeIII GGCC 3 cut(s) 276, 1077, 1224
HapII CCGG 3 cut(s) 38, 411, 1151
HhaI GCGC 1 cut(s) 442
Hin6I GCGC 1 cut(s) 440
HinP1I GCGC 1 cut(s) 440
HincII GTYRAC 1 cut(s) 253
HindII GTYRAC 1 cut(s) 253
HindIII AAGCTT 2 cut(s) 236, 428
HinfI GANTC 4 cut(s) 88, 339, 717, 1057
HpaI GTTAAC 1 cut(s) 253
HpaII CCGG 3 cut(s) 38, 411, 1151
HphI GGTGA 5 cut(s) 52, 425, 458, 1206, 1270
Hpy166II GTNNAC 3 cut(s) 253, 485, 1214
Hpy188I TCNGA 4 cut(s) 604, 650, 743, 1354
Hpy188III TCNNGA 6 cut(s) 305, 528, 730, 890, 985, 1273
Hpy8I GTNNAC 3 cut(s) 253, 485, 1214
HpyAV CCTTC 7 cut(s) 20, 195, 279, 513, 525, 529, 1279
HpyCH4III ACNGT 3 cut(s) 177, 418, 942
HpyCH4IV ACGT 1 cut(s) 759
HpyF3I CTNAG 2 cut(s) 883, 1218
HpySE526I ACGT 1 cut(s) 759
HspAI GCGC 1 cut(s) 440
KroI GCCGGC 1 cut(s) 410
KroNI GCCGGC 1 cut(s) 412
Ksp22I TGATCA 2 cut(s) 634, 897
KspAI GTTAAC 1 cut(s) 253
Kzo9I GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
LguI GCTCTTC 1 cut(s) 477
Lsp1109I GCAGC 3 cut(s) 46, 419, 553
LweI GCATC 2 cut(s) 296, 394
MaeI CTAG 1 cut(s) 66
MaeII ACGT 1 cut(s) 759
MaeIII GTNAC 5 cut(s) 565, 745, 936, 1103, 1231
MalI GATC 6 cut(s) 188, 636, 652, 776, 899, 1296
MboI GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
MfeI CAATTG 2 cut(s) 681, 843
MhlI GDGCHC 3 cut(s) 47, 472, 1226
MlyI GAGTC 1 cut(s) 348
Mph1103I ATGCAT 1 cut(s) 1319
MroNI GCCGGC 1 cut(s) 410
MroXI GAANNNNTTC 1 cut(s) 348
MseI TTAA 5 cut(s) 252, 611, 821, 1185, 1378
MslI CAYNNNNRTG 1 cut(s) 863
MspI CCGG 3 cut(s) 38, 411, 1151
MunI CAATTG 2 cut(s) 681, 843
Mva1269I GAATGC 1 cut(s) 1018
MvnI CGCG 1 cut(s) 770
NaeI GCCGGC 1 cut(s) 412
NcoI CCATGG 2 cut(s) 545, 920
NdeII GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
NgoMIV GCCGGC 1 cut(s) 410
NlaIV GGNNCC 3 cut(s) 114, 929, 1224
NmuCI GTSAC 3 cut(s) 565, 745, 936
NsiI ATGCAT 1 cut(s) 1319
NspI RCATGY 1 cut(s) 950
PciSI GCTCTTC 1 cut(s) 477
PctI GAATGC 1 cut(s) 1018
PdiI GCCGGC 1 cut(s) 412
PdmI GAANNNNTTC 1 cut(s) 348
PfeI GAWTC 3 cut(s) 88, 717, 1057
PflFI GACNNNGTC 1 cut(s) 980
PinAI ACCGGT 1 cut(s) 1150
PkrI GCNGC 3 cut(s) 36, 409, 543
PleI GAGTC 1 cut(s) 347
PpsI GAGTC 1 cut(s) 347
PsiI TTATAA 2 cut(s) 966, 1004
PspFI CCCAGC 1 cut(s) 1043
PspN4I GGNNCC 3 cut(s) 114, 929, 1224
PspOMI GGGCCC 1 cut(s) 1222
PspPI GGNCC 3 cut(s) 1148, 1222, 1223
PstI CTGCAG 1 cut(s) 36
PsyI GACNNNGTC 1 cut(s) 980
RsaI GTAC 4 cut(s) 59, 392, 787, 951
RsaNI GTAC 4 cut(s) 58, 391, 786, 950
RseI CAYNNNNRTG 1 cut(s) 863
SapI GCTCTTC 1 cut(s) 477
SaqAI TTAA 5 cut(s) 252, 611, 821, 1185, 1378
SatI GCNGC 3 cut(s) 35, 408, 542
Sau3AI GATC 6 cut(s) 186, 634, 650, 774, 897, 1294
Sau96I GGNCC 3 cut(s) 1148, 1222, 1223
ScaI AGTACT 1 cut(s) 59
SchI GAGTC 1 cut(s) 348
SduI GDGCHC 3 cut(s) 47, 472, 1226
SfaNI GCATC 2 cut(s) 296, 394
SfcI CTRYAG 1 cut(s) 32
SinI GGWCC 1 cut(s) 1148
SmiMI CAYNNNNRTG 1 cut(s) 863
SsiI CCGC 1 cut(s) 768
SspI AATATT 1 cut(s) 423
SspMI CTAG 1 cut(s) 66
StyI CCWWGG 3 cut(s) 545, 781, 920
TaaI ACNGT 3 cut(s) 177, 418, 942
TaiI ACGT 1 cut(s) 762
TaqI TCGA 7 cut(s) 86, 120, 185, 342, 790, 1121, 1344
TaqII GACCGA 1 cut(s) 41
TatI WGTACW 1 cut(s) 57
TfiI GAWTC 3 cut(s) 88, 717, 1057
Tru1I TTAA 5 cut(s) 252, 611, 821, 1185, 1378
Tru9I TTAA 5 cut(s) 252, 611, 821, 1185, 1378
TscAI CASTG 4 cut(s) 221, 421, 945, 1045
TseFI GTSAC 3 cut(s) 565, 745, 936
TseI GCWGC 3 cut(s) 34, 407, 541
Tsp45I GTSAC 3 cut(s) 565, 745, 936
TspDTI ATGAA 2 cut(s) 1022, 1157
TspGWI ACGGA 1 cut(s) 1091
TspRI CASTG 4 cut(s) 221, 421, 945, 1045
Tth111I GACNNNGTC 1 cut(s) 980
VpaK11BI GGWCC 1 cut(s) 1148
XapI RAATTY 3 cut(s) 375, 559, 1067
XceI RCATGY 1 cut(s) 950
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 1 cut(s) 66
ZrmI AGTACT 1 cut(s) 59
Zsp2I ATGCAT 1 cut(s) 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.