Prupe.7G117300_v2.0.a1

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
14210269 .. 14211085
817 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G117300.1

Sequence Viewer

Length: 315 bp
ATGTTGCTAGTTTTGCAGACATGCGGGAAATACATTCATCGCACATTGAAGAACTCGAGCATGATAATCTCAAATTTGATTGGACCTGCGGAACAAATGTCTTTAGCTAATCATCCAATAAAAGGTTTCTACTTTTTGGTCGGTGATGGACCTCTGAGCCTTGAAATAACCATTGTAAGTTACGTGGGGAAAGTGAGGGCCGCCTTCAATATGGAAAAAGGTGTCATAGATCCACAAAAGTTGAAGTCGTGCATGGAAAATGCCTTGCAAATGATACTCAACGACTCGCACAAACATATGTCGCTTAACATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

105

Amino Acids

11.56

Weight (kDa)

9.0

Isoelectric Point (pI)

44.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 94
AciI CCGC 3 cut(s) 24, 89, 201
AclWI GGATC 1 cut(s) 224
AcsI RAATTY 1 cut(s) 73
AfiI CCNNNNNNNGG 1 cut(s) 122
AgsI TTSAA 4 cut(s) 49, 164, 208, 244
AluBI AGCT 1 cut(s) 107
AluI AGCT 1 cut(s) 107
AlwI GGATC 1 cut(s) 224
Ama87I CYCGRG 1 cut(s) 55
AoxI GGCC 1 cut(s) 198
ApoI RAATTY 1 cut(s) 73
AspS9I GGNCC 3 cut(s) 83, 149, 198
AsuHPI GGTGA 1 cut(s) 155
AvaI CYCGRG 1 cut(s) 55
AvaII GGWCC 2 cut(s) 83, 149
BccI CCATC 1 cut(s) 140
BfaI CTAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 94
BisI GCNGC 1 cut(s) 201
BlsI GCNGC 1 cut(s) 202
Bme18I GGWCC 2 cut(s) 83, 149
BmeT110I CYCGRG 1 cut(s) 55
BmgT120I GGNCC 3 cut(s) 83, 149, 198
BsaAI YACGTR 1 cut(s) 184
Bsc4I CCNNNNNNNGG 1 cut(s) 122
BseGI GGATG 1 cut(s) 112
BseLI CCNNNNNNNGG 1 cut(s) 122
BseMII CTCAG 1 cut(s) 146
BshFI GGCC 1 cut(s) 200
BsiHKCI CYCGRG 1 cut(s) 55
BslI CCNNNNNNNGG 1 cut(s) 122
BsnI GGCC 1 cut(s) 200
BsoBI CYCGRG 1 cut(s) 55
Bsp143I GATC 1 cut(s) 229
BspACI CCGC 3 cut(s) 24, 89, 201
BspANI GGCC 1 cut(s) 200
BspCNI CTCAG 1 cut(s) 147
BspMI ACCTGC 1 cut(s) 94
BspPI GGATC 1 cut(s) 224
BssMI GATC 1 cut(s) 229
BstBAI YACGTR 1 cut(s) 184
BstDEI CTNAG 1 cut(s) 155
BstF5I GGATG 1 cut(s) 112
BstKTI GATC 1 cut(s) 232
BstMBI GATC 1 cut(s) 229
BstMWI GCNNNNNNNGC 1 cut(s) 13
BstNSI RCATGY 1 cut(s) 24
BstX2I RGATCY 1 cut(s) 229
BstYI RGATCY 1 cut(s) 229
BsuRI GGCC 1 cut(s) 200
BtgZI GCGATG 1 cut(s) 23
BtsCI GGATG 1 cut(s) 112
BveI ACCTGC 1 cut(s) 94
Cfr13I GGNCC 3 cut(s) 83, 149, 198
CspCI CAANNNNNGTGG 2 cut(s) 222, 257
CviAII CATG 3 cut(s) 21, 61, 253
CviJI RGCY 3 cut(s) 107, 159, 200
CviKI_1 RGCY 3 cut(s) 107, 159, 200
DdeI CTNAG 1 cut(s) 155
DpnI GATC 1 cut(s) 231
DpnII GATC 1 cut(s) 229
Eco47I GGWCC 2 cut(s) 83, 149
Eco88I CYCGRG 1 cut(s) 55
FaeI CATG 3 cut(s) 24, 64, 256
FaiI YATR 7 cut(s) 22, 62, 212, 227, 254, 297, 299
FatI CATG 3 cut(s) 20, 60, 252
FauI CCCGC 1 cut(s) 17
FauNDI CATATG 1 cut(s) 297
Fnu4HI GCNGC 1 cut(s) 201
FokI GGATG 1 cut(s) 99
Fsp4HI GCNGC 1 cut(s) 201
FspBI CTAG 1 cut(s) 8
GluI GCNGC 1 cut(s) 201
HaeIII GGCC 1 cut(s) 200
Hin1II CATG 3 cut(s) 24, 64, 256
HinfI GANTC 1 cut(s) 284
HphI GGTGA 1 cut(s) 155
Hpy188I TCNGA 1 cut(s) 156
HpyAV CCTTC 1 cut(s) 214
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 3 cut(s) 16, 252, 268
HpyF10VI GCNNNNNNNGC 1 cut(s) 13
HpyF3I CTNAG 1 cut(s) 155
HpySE526I ACGT 1 cut(s) 183
Hsp92II CATG 3 cut(s) 24, 64, 256
Kzo9I GATC 1 cut(s) 229
LpnPI CCDG 1 cut(s) 99
MaeI CTAG 1 cut(s) 8
MaeII ACGT 1 cut(s) 183
MaeIII GTNAC 1 cut(s) 179
MalI GATC 1 cut(s) 231
MboI GATC 1 cut(s) 229
MboII GAAGA 1 cut(s) 61
MflI RGATCY 1 cut(s) 229
MluCI AATT 1 cut(s) 73
MlyI GAGTC 1 cut(s) 278
MnlI CCTC 2 cut(s) 162, 189
MseI TTAA 2 cut(s) 306, 313
MwoI GCNNNNNNNGC 1 cut(s) 13
NdeI CATATG 1 cut(s) 297
NdeII GATC 1 cut(s) 229
NlaIII CATG 3 cut(s) 24, 64, 256
NspI RCATGY 1 cut(s) 24
PaeR7I CTCGAG 1 cut(s) 55
PkrI GCNGC 1 cut(s) 202
PleI GAGTC 1 cut(s) 278
PpsI GAGTC 1 cut(s) 278
Ppu21I YACGTR 1 cut(s) 184
PspPI GGNCC 3 cut(s) 83, 149, 198
PspXI VCTCGAGB 1 cut(s) 55
PsuI RGATCY 1 cut(s) 229
SaqAI TTAA 2 cut(s) 306, 313
SatI GCNGC 1 cut(s) 201
Sau3AI GATC 1 cut(s) 229
Sau96I GGNCC 3 cut(s) 83, 149, 198
SchI GAGTC 1 cut(s) 278
SetI ASST 6 cut(s) 88, 109, 127, 154, 186, 223
Sfr274I CTCGAG 1 cut(s) 55
SinI GGWCC 2 cut(s) 83, 149
SlaI CTCGAG 1 cut(s) 55
SmlI CTYRAG 1 cut(s) 55
SmoI CTYRAG 1 cut(s) 55
Sse9I AATT 1 cut(s) 73
SsiI CCGC 3 cut(s) 24, 89, 201
SspMI CTAG 1 cut(s) 8
TaiI ACGT 1 cut(s) 186
TaqI TCGA 1 cut(s) 56
TasI AATT 1 cut(s) 73
TauI GCSGC 1 cut(s) 203
Tru1I TTAA 2 cut(s) 306, 313
Tru9I TTAA 2 cut(s) 306, 313
TspDTI ATGAA 1 cut(s) 26
VpaK11BI GGWCC 2 cut(s) 83, 149
XapI RAATTY 1 cut(s) 73
XceI RCATGY 1 cut(s) 24
XhoI CTCGAG 1 cut(s) 55
XspI CTAG 1 cut(s) 8
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.