Prupe.8G044700_v2.0.a1

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000634
Physical Location & Seq
Forward (+)
4645193 .. 4648216
3024 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G044700.1

Sequence Viewer

Length: 1401 bp
ATGGAGTTGGAGGAAGAAGAAATACTAGAGCCAGTGAGCCCTACTGGTCACTACTTCACCAGCTCTGTGTTGTCAGTGTCGAATCTTGCTGTTTTGGAAACTGAGATTCCATTCGATGAGTCTCAAACCATGTATTTAGTTCAGAATGTCTTCCTCCCAATCAGCCCACGCTTCTCCTCTATCATGGTTGAAAATAATGGGAAGAAACGGTGGAAAAGGGTTGAGGTGAAGCTTGAAGACCATGTAAACATCCCTATTTTCCCATCCAGCCTATCTCCAGAAGCATATGACAAGTATCTTGACGACTACATATCAAAGCTAGCAGTAGAAAGATTGTCACCAGAAAAACCACTTTGGGAATTTCATATCATCAAATACCCAACTAGCAATGCAGCTGGTAATGTAATCATCAAGCTCCACCATGCCCTAGGGGATGGCTTCTCTCTCATGAGTGCTCTTCTTTCTTGCCTACAACGGGCTGACGATCCTCGTCTTCCCCTAACTTTTCCTTCAAGGCAAAGGTCACAGCCAAAGAGTGAAAGTTTGGTGACAAAAGTTTGCTCATCAGTCTTTAACACCCTATCAGATTTTTGGTGGGGGATTTCAAACAGCACCATGGATGAAGATGATCTCACACCAATCAGGTCTGGGAAGGGAATTGAGTTTCAGCCCATTGCAGTGTCAACTATGACGTTCTCTCTTGATCAAATCAAATTAATCAAGAGTAAGCTTGGAGTGACAATAAATGACGTTCTTACGGGGATGATCTTCCTTGGCACTCGACTATACATGCAAGAGATTGACAAAAGTTCAAGAAAAGCACGAGGCACAGCAGTGGTGTTGCTCAACACAAGGATGATGGGGGATTATACTTCAATCCAGGAGATGATCAAACCCAACAGCAAGATGCCATGGGGCAATCATTTTACATTCTTGCATGTACCAATACCCAACTTATTCTTACCTGAAGATGATCATCCTCATGAATATTCAAATATTGCCCTTGAATTTGTCTCCAAGGCACAGAAAATAATCAGCACGAAAAGAAACTCTTTAGCTATTTACCTCACCAGCAGGTTCTTGGAGATTCTCAACAAATTTGGAGGCCATGAGGCAGCAGCCAAATACATTCGTAGCACATTGAAGAACTCGAGCATGGTAATCTCGAATTTGATTGGGCCTGTGGAACAAATGGCTTTGGGTAATCATCGAATTAAAGGCTTATACTTTTTGGTGTTAGGTTCACCTGAGGGCCTTGACGTGACAATAGTAAGTTACATGGGGAAGGTGAGGGTTGCCTTCAAAATGGAAAAGGGGCTTATCGATCCACAAAAGTTCAAGTCATGCATGGAAAATGCATTTGAGATGATACTCAAAGCATCGGACGCGAAGAACAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

467

Amino Acids

52.54

Weight (kDa)

6.85

Isoelectric Point (pI)

49.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1065
AccII CGCG 1 cut(s) 1388
AclWI GGATC 2 cut(s) 479, 1319
AcsI RAATTY 4 cut(s) 359, 1007, 1097, 1168
AcuI CTGAAG 1 cut(s) 987
AfaI GTAC 1 cut(s) 942
AfiI CCNNNNNNNGG 1 cut(s) 475
AjiI CACGTC 1 cut(s) 1261
AjnI CCWGG 1 cut(s) 879
AleI CACNNNNGTG 1 cut(s) 833
AluBI AGCT 7 cut(s) 63, 232, 319, 395, 415, 730, 1058
AluI AGCT 7 cut(s) 63, 232, 319, 395, 415, 730, 1058
Alw21I GWGCWC 1 cut(s) 457
Alw26I GTCTC 2 cut(s) 126, 1018
AlwI GGATC 2 cut(s) 479, 1319
Ama87I CYCGRG 1 cut(s) 1150
AoxI GGCC 3 cut(s) 1105, 1178, 1252
ApeKI GCWGC 3 cut(s) 392, 1115, 1118
ApoI RAATTY 4 cut(s) 359, 1007, 1097, 1168
AseI ATTAAT 1 cut(s) 716
Asp700I GAANNNNTTC 1 cut(s) 149
AspA2I CCTAGG 1 cut(s) 427
AspS9I GGNCC 2 cut(s) 1178, 1252
AsuHPI GGTGA 7 cut(s) 49, 238, 330, 559, 1060, 1236, 1300
AsuNHI GCTAGC 1 cut(s) 319
AvaI CYCGRG 1 cut(s) 1150
AvrII CCTAGG 1 cut(s) 427
AxyI CCTNAGG 1 cut(s) 1248
BanII GRGCYC 1 cut(s) 41
BarI GAAGNNNNNNTAC 1 cut(s) 38
BauI CACGAG 1 cut(s) 822
BbsI GAAGAC 3 cut(s) 142, 243, 485
Bbv12I GWGCWC 1 cut(s) 457
BbvI GCAGC 3 cut(s) 404, 1127, 1130
BccI CCATC 3 cut(s) 271, 428, 853
BciT130I CCWGG 1 cut(s) 881
BclI TGATCA 3 cut(s) 703, 888, 973
BcoDI GTCTC 2 cut(s) 126, 1018
BfaI CTAG 4 cut(s) 26, 320, 384, 428
BfuAI ACCTGC 1 cut(s) 1065
BisI GCNGC 3 cut(s) 393, 1116, 1119
BlnI CCTAGG 1 cut(s) 427
BlsI GCNGC 3 cut(s) 394, 1117, 1120
Bme1390I CCNGG 1 cut(s) 881
BmeT110I CYCGRG 1 cut(s) 1150
BmgBI CACGTC 1 cut(s) 1261
BmgT120I GGNCC 2 cut(s) 1178, 1252
BmrFI CCNGG 1 cut(s) 881
BmsI GCATC 2 cut(s) 897, 1388
BmtI GCTAGC 1 cut(s) 323
BpiI GAAGAC 3 cut(s) 142, 243, 485
BpmI CTGGAG 1 cut(s) 261
Bsa29I ATCGAT 1 cut(s) 1323
BsaBI GATNNNNATC 1 cut(s) 975
BsaJI CCNNGG 5 cut(s) 427, 615, 772, 911, 1017
Bsc4I CCNNNNNNNGG 1 cut(s) 475
Bse1I ACTGG 2 cut(s) 32, 49
Bse21I CCTNAGG 1 cut(s) 1248
Bse3DI GCAATG 2 cut(s) 394, 672
Bse8I GATNNNNATC 1 cut(s) 975
BseBI CCWGG 1 cut(s) 881
BseCI ATCGAT 1 cut(s) 1323
BseDI CCNNGG 5 cut(s) 427, 615, 772, 911, 1017
BseGI GGATG 7 cut(s) 249, 263, 439, 625, 768, 861, 976
BseJI GATNNNNATC 1 cut(s) 975
BseLI CCNNNNNNNGG 1 cut(s) 475
BseMI GCAATG 2 cut(s) 394, 672
BseMII CTCAG 2 cut(s) 93, 1239
BseNI ACTGG 2 cut(s) 32, 49
BseRI GAGGAG 1 cut(s) 166
BseXI GCAGC 3 cut(s) 404, 1127, 1130
Bsh1236I CGCG 1 cut(s) 1388
BshFI GGCC 3 cut(s) 1107, 1180, 1254
BshVI ATCGAT 1 cut(s) 1323
BsiHKAI GWGCWC 1 cut(s) 457
BsiHKCI CYCGRG 1 cut(s) 1150
BslI CCNNNNNNNGG 1 cut(s) 475
BsmAI GTCTC 2 cut(s) 126, 1018
BsnI GGCC 3 cut(s) 1107, 1180, 1254
BsoBI CYCGRG 1 cut(s) 1150
Bsp1286I GDGCHC 2 cut(s) 41, 457
Bsp143I GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
Bsp19I CCATGG 2 cut(s) 615, 911
BspANI GGCC 3 cut(s) 1107, 1180, 1254
BspCNI CTCAG 2 cut(s) 94, 1240
BspDI ATCGAT 1 cut(s) 1323
BspFNI CGCG 1 cut(s) 1388
BspHI TCATGA 2 cut(s) 447, 982
BspMI ACCTGC 1 cut(s) 1065
BspOI GCTAGC 1 cut(s) 323
BspPI GGATC 2 cut(s) 479, 1319
BspQI GCTCTTC 1 cut(s) 462
BsrDI GCAATG 2 cut(s) 394, 672
BsrI ACTGG 2 cut(s) 32, 49
BssECI CCNNGG 5 cut(s) 427, 615, 772, 911, 1017
BssMI GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
BssSI CACGAG 1 cut(s) 822
BssT1I CCWWGG 5 cut(s) 427, 615, 772, 911, 1017
Bst2BI CACGAG 1 cut(s) 822
Bst2UI CCWGG 1 cut(s) 881
Bst4CI ACNGT 1 cut(s) 210
Bst6I CTCTTC 1 cut(s) 462
BstC8I GCNNGC 1 cut(s) 321
BstDEI CTNAG 2 cut(s) 102, 1248
BstDSI CCRYGG 2 cut(s) 615, 911
BstF5I GGATG 7 cut(s) 249, 263, 439, 625, 768, 861, 976
BstFNI CGCG 1 cut(s) 1388
BstKTI GATC 7 cut(s) 487, 631, 706, 768, 891, 976, 1327
BstMAI GTCTC 2 cut(s) 126, 1018
BstMBI GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
BstMWI GCNNNNNNNGC 1 cut(s) 1385
BstNI CCWGG 1 cut(s) 881
BstNSI RCATGY 2 cut(s) 793, 941
BstSCI CCNGG 1 cut(s) 879
BstUI CGCG 1 cut(s) 1388
BstV1I GCAGC 3 cut(s) 404, 1127, 1130
BstV2I GAAGAC 3 cut(s) 142, 243, 485
Bsu15I ATCGAT 1 cut(s) 1323
Bsu36I CCTNAGG 1 cut(s) 1248
BsuRI GGCC 3 cut(s) 1107, 1180, 1254
BsuTUI ATCGAT 1 cut(s) 1323
BtgI CCRYGG 2 cut(s) 615, 911
BtrI CACGTC 1 cut(s) 1261
BtsCI GGATG 7 cut(s) 249, 263, 439, 625, 768, 861, 976
BtsI GCAGTG 2 cut(s) 684, 840
BtsIMutI CAGTG 4 cut(s) 39, 81, 684, 840
BveI ACCTGC 1 cut(s) 1065
Cac8I GCNNGC 1 cut(s) 321
CciI TCATGA 2 cut(s) 447, 982
Cfr13I GGNCC 2 cut(s) 1178, 1252
ClaI ATCGAT 1 cut(s) 1323
CseI GACGC 1 cut(s) 1394
Csp6I GTAC 1 cut(s) 941
CviQI GTAC 1 cut(s) 941
DdeI CTNAG 2 cut(s) 102, 1248
DpnI GATC 7 cut(s) 486, 630, 705, 767, 890, 975, 1326
DpnII GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
Eam1104I CTCTTC 1 cut(s) 462
EarI CTCTTC 1 cut(s) 462
Eco130I CCWWGG 5 cut(s) 427, 615, 772, 911, 1017
Eco24I GRGCYC 1 cut(s) 41
Eco57I CTGAAG 1 cut(s) 987
Eco81I CCTNAGG 1 cut(s) 1248
Eco88I CYCGRG 1 cut(s) 1150
EcoO109I RGGNCCY 1 cut(s) 1252
EcoRII CCWGG 1 cut(s) 879
EcoT14I CCWWGG 5 cut(s) 427, 615, 772, 911, 1017
EcoT22I ATGCAT 2 cut(s) 1349, 1360
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 5 cut(s) 427, 615, 772, 911, 1017
FalI AAGNNNNNCTT 2 cut(s) 1036, 1068
FauNDI CATATG 1 cut(s) 286
FbaI TGATCA 3 cut(s) 703, 888, 973
Fnu4HI GCNGC 3 cut(s) 393, 1116, 1119
FokI GGATG 7 cut(s) 236, 250, 446, 632, 775, 868, 963
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 3 cut(s) 393, 1116, 1119
FspBI CTAG 4 cut(s) 26, 320, 384, 428
GluI GCNGC 3 cut(s) 393, 1116, 1119
GsuI CTGGAG 1 cut(s) 261
HaeIII GGCC 3 cut(s) 1107, 1180, 1254
HgaI GACGC 1 cut(s) 1394
HincII GTYRAC 1 cut(s) 684
HindII GTYRAC 1 cut(s) 684
HindIII AAGCTT 2 cut(s) 230, 728
HinfI GANTC 4 cut(s) 82, 106, 119, 1087
HphI GGTGA 7 cut(s) 49, 238, 330, 559, 1060, 1236, 1300
Hpy166II GTNNAC 3 cut(s) 247, 684, 1244
Hpy188I TCNGA 3 cut(s) 144, 586, 1384
Hpy188III TCNNGA 8 cut(s) 278, 299, 448, 701, 721, 813, 983, 1165
Hpy8I GTNNAC 3 cut(s) 247, 684, 1244
HpyAV CCTTC 4 cut(s) 519, 646, 1279, 1309
HpyCH4III ACNGT 1 cut(s) 210
HpyCH4IV ACGT 3 cut(s) 692, 750, 1260
HpyCH4V TGCA 6 cut(s) 392, 677, 793, 937, 1347, 1358
HpyF10VI GCNNNNNNNGC 1 cut(s) 1385
HpyF3I CTNAG 2 cut(s) 102, 1248
HpySE526I ACGT 3 cut(s) 692, 750, 1260
Ksp22I TGATCA 3 cut(s) 703, 888, 973
Kzo9I GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
LguI GCTCTTC 1 cut(s) 462
LmnI GCTCC 1 cut(s) 420
Lsp1109I GCAGC 3 cut(s) 404, 1127, 1130
LweI GCATC 2 cut(s) 897, 1388
MaeI CTAG 4 cut(s) 26, 320, 384, 428
MaeII ACGT 3 cut(s) 692, 750, 1260
MaeIII GTNAC 7 cut(s) 47, 336, 522, 547, 736, 1261, 1274
MalI GATC 7 cut(s) 486, 630, 705, 767, 890, 975, 1326
MboI GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
MhlI GDGCHC 2 cut(s) 41, 457
MluCI AATT 8 cut(s) 359, 657, 713, 1007, 1097, 1168, 1212, 1396
MlyI GAGTC 1 cut(s) 128
Mph1103I ATGCAT 2 cut(s) 1349, 1360
MroXI GAANNNNTTC 1 cut(s) 149
MseI TTAA 4 cut(s) 573, 716, 1215, 1399
MslI CAYNNNNRTG 4 cut(s) 677, 833, 854, 981
MspA1I CMGCKG 1 cut(s) 395
MspR9I CCNGG 1 cut(s) 881
MvaI CCWGG 1 cut(s) 881
MvnI CGCG 1 cut(s) 1388
MwoI GCNNNNNNNGC 1 cut(s) 1385
NcoI CCATGG 2 cut(s) 615, 911
NdeI CATATG 1 cut(s) 286
NdeII GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
NheI GCTAGC 1 cut(s) 319
NmuCI GTSAC 6 cut(s) 47, 336, 522, 547, 736, 1261
NsiI ATGCAT 2 cut(s) 1349, 1360
NspI RCATGY 2 cut(s) 793, 941
OliI CACNNNNGTG 1 cut(s) 833
PaeR7I CTCGAG 1 cut(s) 1150
PagI TCATGA 2 cut(s) 447, 982
PciSI GCTCTTC 1 cut(s) 462
PdmI GAANNNNTTC 1 cut(s) 149
PfeI GAWTC 3 cut(s) 82, 106, 1087
PfoI TCCNGGA 1 cut(s) 879
PkrI GCNGC 3 cut(s) 394, 1117, 1120
PleI GAGTC 1 cut(s) 127
PpsI GAGTC 1 cut(s) 127
PshBI ATTAAT 1 cut(s) 716
Psp6I CCWGG 1 cut(s) 879
PspGI CCWGG 1 cut(s) 879
PspPI GGNCC 2 cut(s) 1178, 1252
PspXI VCTCGAGB 1 cut(s) 1150
PvuII CAGCTG 1 cut(s) 395
RsaI GTAC 1 cut(s) 942
RsaNI GTAC 1 cut(s) 941
RseI CAYNNNNRTG 4 cut(s) 677, 833, 854, 981
SapI GCTCTTC 1 cut(s) 462
SaqAI TTAA 4 cut(s) 573, 716, 1215, 1399
SatI GCNGC 3 cut(s) 393, 1116, 1119
Sau3AI GATC 7 cut(s) 484, 628, 703, 765, 888, 973, 1324
Sau96I GGNCC 2 cut(s) 1178, 1252
SchI GAGTC 1 cut(s) 128
ScrFI CCNGG 1 cut(s) 881
SduI GDGCHC 2 cut(s) 41, 457
SfaNI GCATC 2 cut(s) 897, 1388
Sfr274I CTCGAG 1 cut(s) 1150
SlaI CTCGAG 1 cut(s) 1150
SmiMI CAYNNNNRTG 4 cut(s) 677, 833, 854, 981
SmlI CTYRAG 1 cut(s) 1150
SmoI CTYRAG 1 cut(s) 1150
Sse9I AATT 8 cut(s) 359, 657, 713, 1007, 1097, 1168, 1212, 1396
SspI AATATT 2 cut(s) 989, 997
SspMI CTAG 4 cut(s) 26, 320, 384, 428
StyD4I CCNGG 1 cut(s) 879
StyI CCWWGG 5 cut(s) 427, 615, 772, 911, 1017
TaaI ACNGT 1 cut(s) 210
TaiI ACGT 3 cut(s) 695, 753, 1263
TaqI TCGA 7 cut(s) 80, 114, 781, 1151, 1166, 1210, 1323
TasI AATT 8 cut(s) 359, 657, 713, 1007, 1097, 1168, 1212, 1396
TfiI GAWTC 3 cut(s) 82, 106, 1087
Tru1I TTAA 4 cut(s) 573, 716, 1215, 1399
Tru9I TTAA 4 cut(s) 573, 716, 1215, 1399
TscAI CASTG 4 cut(s) 39, 81, 684, 840
TseFI GTSAC 6 cut(s) 47, 336, 522, 547, 736, 1261
TseI GCWGC 3 cut(s) 392, 1115, 1118
Tsp45I GTSAC 6 cut(s) 47, 336, 522, 547, 736, 1261
TspDTI ATGAA 3 cut(s) 353, 636, 999
TspRI CASTG 4 cut(s) 39, 81, 684, 840
VspI ATTAAT 1 cut(s) 716
XapI RAATTY 4 cut(s) 359, 1007, 1097, 1168
XceI RCATGY 2 cut(s) 793, 941
XcmI CCANNNNNNNNNTGG 1 cut(s) 1078
XhoI CTCGAG 1 cut(s) 1150
XmaJI CCTAGG 1 cut(s) 427
XmnI GAANNNNTTC 1 cut(s) 149
XspI CTAG 4 cut(s) 26, 320, 384, 428
Zsp2I ATGCAT 2 cut(s) 1349, 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.