Prupe.4G258100_v2.0.a1

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000634
Physical Location & Seq
Forward (+)
18319321 .. 18324053
4733 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G258100.1

Sequence Viewer

Length: 1407 bp
ATGGAGTTTAGGGAGGAAGGAGAAGTAGAGCCAGTGAGCCCCACTGGTCAATACTTCAACAGTTCTATCTTGTCTGTTGCAATTCTTGCTGTTTTGGAATTTGAGCTTCCAATCAATGATTCCCAAGCTCTCTCTTTGCTTCAAGATGTCTTCCTCCCCATCAACCCTCGCTTCTCTTCTATCATGGTAAGTGACAATGTAGATCAAAAGAAACAATGGAAGAGGGTTGAAGTGAAGCTTGAAGACCATGTTCATGTCCCCATTTTCCCTTCTAAAATGTCACCAGAATCCTATGATGAGTATTTTGATGACTACATATCAAATATAGCAGCAGAAAAATTCCCACAAAACAGGCCATTATGGGAAATTCACATTCTCAAGTACCCAACAAGCCACGCAGCTGGTACCCTGATTTTCAAGCTTCACCATGCCCTAGGTGATGGCTACTCTCTAATGGGTGCTCTTCTTTCTTGTCTGCAAAGTGCTCAAAACCCTTCTGTTCCTCTAACATTTCCTTCCCTGAAGAGCTCAGGACCACAAACCACTCACAAGACTAAAATTGTGTCTCAGTTTTTCTCTTCAGTTTTCCAAACTGTATCGGATTTCAGTTGGAGCATTTTGAAGAGCAATTTCGTAGAAGATGATCGAACTCCGATTAGGTCTGGGGAAGATGGAGTTGAGTTTCGGCCAATAACACTATCAACCTTGACGTTCTCCATTGATGAAATCAAACTGATCAAGAACAAACTTGGAGTGACGACAAATGATGTGATTTCCGGAATCATCTTCTTGGGCACCAGAATATACATGCAAGAGGTTACCCAAAAATCAAGCAATGAACGTTGTACGGCATTGGTGCTACTCAACACCAGAAACATCGAGGGTTACATGCCAATCAAGGAGATGATCGAACCCAATCATGATGAGATGTCATGGGGAAACCAATTTGGCTTCTTACACGTGTCAGTGCCCAAGTCGACTGAAATCTCAAACCCACTCGACTTTGTTTGGGAAGCACAAAAAATAATCAAGAAAAAGAGAAGTTCTGCCGCTGGCTACCTCACTAGCTGGCTGTTGGACGTTTTAAAGAAATTTAGAGGCCCTGAGGGAGCAGCTAGATACATCCATGGCACACTCAAGAACTCGAGCATGACAATCTCAAATATGATTGGGCCAGTTGAACAAATGGCTTTGGCCAATCAGCCCATTTGTGGCTTCTACTATATGGTGGTTGGTCCACCTCAGTGTCTTACTATAACGGCCCTTAGTTATATGGGAAAGCTGAGGGTTGCATTCGGAGCTGAAAAAGGCTTCATAGATTCCCACAAATTGAAGGCATCCATGCAAAATGCCTTTGGGGTAATACTCAAAGCCTCTTACCAAATTCCTCCTGCAAAGGCAGCGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

469

Amino Acids

52.34

Weight (kDa)

6.61

Isoelectric Point (pI)

49.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 404
AccB1I GGYRCC 2 cut(s) 404, 794
AccI GTMKAC 1 cut(s) 977
AccIII TCCGGA 1 cut(s) 776
AciI CCGC 1 cut(s) 1050
AclI AACGTT 1 cut(s) 841
AcoI YGGCCR 2 cut(s) 686, 1194
AcsI RAATTY 5 cut(s) 98, 338, 366, 1091, 1383
AcuI CTGAAG 2 cut(s) 542, 564
AcvI CACGTG 1 cut(s) 961
AfaI GTAC 3 cut(s) 383, 406, 847
AfiI CCNNNNNNNGG 1 cut(s) 1211
AflIII ACRYGT 2 cut(s) 958, 960
AgsI TTSAA 8 cut(s) 58, 143, 230, 242, 418, 622, 1181, 1333
AjuI GAANNNNNNNTTGG 2 cut(s) 103, 135
AleI CACNNNNGTG 1 cut(s) 1243
Alw21I GWGCWC 3 cut(s) 463, 487, 530
Alw26I GTCTC 1 cut(s) 570
Ama87I CYCGRG 1 cut(s) 1144
Aor13HI TCCGGA 1 cut(s) 776
AoxI GGCC 6 cut(s) 353, 686, 1099, 1172, 1194, 1260
ApeKI GCWGC 4 cut(s) 329, 398, 1112, 1400
ApoI RAATTY 5 cut(s) 98, 338, 366, 1091, 1383
Asp718I GGTACC 1 cut(s) 404
AspA2I CCTAGG 1 cut(s) 433
AspS9I GGNCC 5 cut(s) 533, 1100, 1172, 1235, 1261
AsuHPI GGTGA 3 cut(s) 273, 416, 449
AvaI CYCGRG 1 cut(s) 1144
AvaII GGWCC 2 cut(s) 533, 1235
AvrII CCTAGG 1 cut(s) 433
AxyI CCTNAGG 1 cut(s) 1104
BaeGI GKGCMC 2 cut(s) 797, 972
BalI TGGCCA 1 cut(s) 1196
BanI GGYRCC 2 cut(s) 404, 794
BanII GRGCYC 2 cut(s) 41, 530
BbrPI CACGTG 1 cut(s) 961
BbsI GAAGAC 2 cut(s) 142, 249
Bbv12I GWGCWC 3 cut(s) 463, 487, 530
BbvCI CCTCAGC 1 cut(s) 1283
BbvI GCAGC 3 cut(s) 341, 410, 1124
BccI CCATC 3 cut(s) 167, 434, 665
BceAI ACGGC 2 cut(s) 864, 1275
BclI TGATCA 1 cut(s) 735
BcoDI GTCTC 1 cut(s) 570
BfaI CTAG 3 cut(s) 434, 1065, 1116
BisI GCNGC 5 cut(s) 330, 399, 1050, 1113, 1401
BlnI CCTAGG 1 cut(s) 433
BlsI GCNGC 5 cut(s) 331, 400, 1051, 1114, 1402
Bme18I GGWCC 2 cut(s) 533, 1235
BmeT110I CYCGRG 1 cut(s) 1144
BmgT120I GGNCC 5 cut(s) 533, 1100, 1172, 1235, 1261
BmiI GGNNCC 2 cut(s) 406, 796
BmsI GCATC 1 cut(s) 1346
BpiI GAAGAC 2 cut(s) 142, 249
Bpu10I CCTNAGC 2 cut(s) 529, 1283
BpuEI CTTGAG 2 cut(s) 362, 1121
BsaAI YACGTR 1 cut(s) 961
BsaJI CCNNGG 2 cut(s) 433, 1126
BsaWI WCCGGW 1 cut(s) 776
Bsc4I CCNNNNNNNGG 1 cut(s) 1211
Bse1I ACTGG 3 cut(s) 32, 49, 1175
Bse21I CCTNAGG 1 cut(s) 1104
Bse3DI GCAATG 1 cut(s) 841
BseAI TCCGGA 1 cut(s) 776
BseDI CCNNGG 2 cut(s) 433, 1126
BseGI GGATG 2 cut(s) 1122, 1337
BseLI CCNNNNNNNGG 1 cut(s) 1211
BseMI GCAATG 1 cut(s) 841
BseMII CTCAG 5 cut(s) 543, 581, 1095, 1256, 1274
BseNI ACTGG 3 cut(s) 32, 49, 1175
BseSI GKGCMC 2 cut(s) 797, 972
BseXI GCAGC 3 cut(s) 341, 410, 1124
BshFI GGCC 6 cut(s) 355, 688, 1101, 1174, 1196, 1262
BshNI GGYRCC 2 cut(s) 404, 794
BsiHKAI GWGCWC 3 cut(s) 463, 487, 530
BsiHKCI CYCGRG 1 cut(s) 1144
BsiSI CCGG 1 cut(s) 777
BslFI GGGAC 1 cut(s) 242
BslI CCNNNNNNNGG 1 cut(s) 1211
BsmAI GTCTC 1 cut(s) 570
BsmFI GGGAC 1 cut(s) 242
BsmI GAATGC 1 cut(s) 1292
BsnI GGCC 6 cut(s) 355, 688, 1101, 1174, 1196, 1262
BsoBI CYCGRG 1 cut(s) 1144
Bsp1286I GDGCHC 6 cut(s) 41, 463, 487, 530, 797, 972
Bsp13I TCCGGA 1 cut(s) 776
Bsp143I GATC 4 cut(s) 202, 643, 735, 906
Bsp19I CCATGG 1 cut(s) 1126
BspACI CCGC 1 cut(s) 1050
BspANI GGCC 6 cut(s) 355, 688, 1101, 1174, 1196, 1262
BspCNI CTCAG 5 cut(s) 542, 580, 1096, 1255, 1275
BspEI TCCGGA 1 cut(s) 776
BspHI TCATGA 1 cut(s) 919
BspLI GGNNCC 2 cut(s) 406, 796
BspQI GCTCTTC 3 cut(s) 468, 518, 617
BspT107I GGYRCC 2 cut(s) 404, 794
BsrDI GCAATG 1 cut(s) 841
BsrI ACTGG 3 cut(s) 32, 49, 1175
BssECI CCNNGG 2 cut(s) 433, 1126
BssMI GATC 4 cut(s) 202, 643, 735, 906
BssT1I CCWWGG 2 cut(s) 433, 1126
Bst4CI ACNGT 2 cut(s) 62, 595
Bst6I CTCTTC 6 cut(s) 181, 215, 468, 518, 583, 617
BstAPI GCANNNNNTGC 1 cut(s) 86
BstBAI YACGTR 1 cut(s) 961
BstC8I GCNNGC 2 cut(s) 1054, 1070
BstDEI CTNAG 6 cut(s) 529, 567, 1104, 1242, 1265, 1283
BstDSI CCRYGG 1 cut(s) 1126
BstEII GGTNACC 1 cut(s) 817
BstF5I GGATG 2 cut(s) 1122, 1337
BstKTI GATC 4 cut(s) 205, 646, 738, 909
BstMAI GTCTC 1 cut(s) 570
BstMBI GATC 4 cut(s) 202, 643, 735, 906
BstMWI GCNNNNNNNGC 3 cut(s) 86, 1298, 1400
BstNSI RCATGY 2 cut(s) 811, 892
BstPI GGTNACC 1 cut(s) 817
BstSLI GKGCMC 2 cut(s) 797, 972
BstV1I GCAGC 3 cut(s) 341, 410, 1124
BstV2I GAAGAC 2 cut(s) 142, 249
BstXI CCANNNNNNTGG 1 cut(s) 401
Bsu36I CCTNAGG 1 cut(s) 1104
BsuRI GGCC 6 cut(s) 355, 688, 1101, 1174, 1196, 1262
BtgI CCRYGG 1 cut(s) 1126
BtsCI GGATG 2 cut(s) 1122, 1337
BtsIMutI CAGTG 4 cut(s) 39, 42, 972, 1250
Cac8I GCNNGC 2 cut(s) 1054, 1070
CciI TCATGA 1 cut(s) 919
Cfr13I GGNCC 5 cut(s) 533, 1100, 1172, 1235, 1261
Csp6I GTAC 3 cut(s) 382, 405, 846
CviQI GTAC 3 cut(s) 382, 405, 846
DdeI CTNAG 6 cut(s) 529, 567, 1104, 1242, 1265, 1283
DpnI GATC 4 cut(s) 204, 645, 737, 908
DpnII GATC 4 cut(s) 202, 643, 735, 906
DraI TTTAAA 1 cut(s) 1086
EaeI YGGCCR 2 cut(s) 686, 1194
Eam1104I CTCTTC 6 cut(s) 181, 215, 468, 518, 583, 617
EarI CTCTTC 6 cut(s) 181, 215, 468, 518, 583, 617
Ecl136II GAGCTC 1 cut(s) 528
Eco130I CCWWGG 2 cut(s) 433, 1126
Eco24I GRGCYC 2 cut(s) 41, 530
Eco47I GGWCC 2 cut(s) 533, 1235
Eco53kI GAGCTC 1 cut(s) 528
Eco57I CTGAAG 2 cut(s) 542, 564
Eco72I CACGTG 1 cut(s) 961
Eco81I CCTNAGG 1 cut(s) 1104
Eco88I CYCGRG 1 cut(s) 1144
Eco91I GGTNACC 1 cut(s) 817
EcoICRI GAGCTC 1 cut(s) 528
EcoO109I RGGNCCY 1 cut(s) 1100
EcoO65I GGTNACC 1 cut(s) 817
EcoT14I CCWWGG 2 cut(s) 433, 1126
EcoT38I GRGCYC 2 cut(s) 41, 530
ErhI CCWWGG 2 cut(s) 433, 1126
FalI AAGNNNNNCTT 2 cut(s) 222, 254
FaqI GGGAC 1 cut(s) 242
FbaI TGATCA 1 cut(s) 735
FblI GTMKAC 1 cut(s) 977
Fnu4HI GCNGC 5 cut(s) 330, 399, 1050, 1113, 1401
FokI GGATG 2 cut(s) 1109, 1324
FriOI GRGCYC 2 cut(s) 41, 530
Fsp4HI GCNGC 5 cut(s) 330, 399, 1050, 1113, 1401
FspBI CTAG 3 cut(s) 434, 1065, 1116
GluI GCNGC 5 cut(s) 330, 399, 1050, 1113, 1401
HaeIII GGCC 6 cut(s) 355, 688, 1101, 1174, 1196, 1262
HapII CCGG 1 cut(s) 777
HincII GTYRAC 1 cut(s) 978
HindII GTYRAC 1 cut(s) 978
HindIII AAGCTT 2 cut(s) 236, 419
HinfI GANTC 4 cut(s) 119, 287, 780, 1319
HpaII CCGG 1 cut(s) 777
HphI GGTGA 3 cut(s) 273, 416, 449
Hpy166II GTNNAC 2 cut(s) 978, 1238
Hpy188I TCNGA 3 cut(s) 601, 654, 1298
Hpy188III TCNNGA 7 cut(s) 143, 531, 739, 777, 920, 1030, 1138
Hpy8I GTNNAC 2 cut(s) 978, 1238
HpyAV CCTTC 5 cut(s) 11, 279, 504, 525, 1327
HpyCH4III ACNGT 2 cut(s) 62, 595
HpyCH4IV ACGT 4 cut(s) 710, 841, 960, 1080
HpyCH4V TGCA 6 cut(s) 80, 478, 811, 1292, 1345, 1394
HpyF10VI GCNNNNNNNGC 3 cut(s) 86, 1298, 1400
HpyF3I CTNAG 6 cut(s) 529, 567, 1104, 1242, 1265, 1283
HpySE526I ACGT 4 cut(s) 710, 841, 960, 1080
Kpn2I TCCGGA 1 cut(s) 776
KpnI GGTACC 1 cut(s) 408
Ksp22I TGATCA 1 cut(s) 735
Kzo9I GATC 4 cut(s) 202, 643, 735, 906
LguI GCTCTTC 3 cut(s) 468, 518, 617
LmnI GCTCC 3 cut(s) 612, 1109, 1298
Lsp1109I GCAGC 3 cut(s) 341, 410, 1124
LweI GCATC 1 cut(s) 1346
MaeI CTAG 3 cut(s) 434, 1065, 1116
MaeII ACGT 4 cut(s) 710, 841, 960, 1080
MaeIII GTNAC 5 cut(s) 191, 279, 754, 817, 884
MalI GATC 4 cut(s) 204, 645, 737, 908
MboI GATC 4 cut(s) 202, 643, 735, 906
MhlI GDGCHC 6 cut(s) 41, 463, 487, 530, 797, 972
MlsI TGGCCA 1 cut(s) 1196
MluNI TGGCCA 1 cut(s) 1196
MmeI TCCRAC 2 cut(s) 590, 1056
Mox20I TGGCCA 1 cut(s) 1196
MroI TCCGGA 1 cut(s) 776
MscI TGGCCA 1 cut(s) 1196
MseI TTAA 1 cut(s) 1085
MslI CAYNNNNRTG 2 cut(s) 252, 1243
Msp20I TGGCCA 1 cut(s) 1196
MspA1I CMGCKG 2 cut(s) 401, 1052
MspI CCGG 1 cut(s) 777
Mva1269I GAATGC 1 cut(s) 1292
MwoI GCNNNNNNNGC 3 cut(s) 86, 1298, 1400
NcoI CCATGG 1 cut(s) 1126
NdeII GATC 4 cut(s) 202, 643, 735, 906
NlaIV GGNNCC 2 cut(s) 406, 796
NmuCI GTSAC 3 cut(s) 191, 279, 754
NspI RCATGY 2 cut(s) 811, 892
OliI CACNNNNGTG 1 cut(s) 1243
PaeR7I CTCGAG 1 cut(s) 1144
PagI TCATGA 1 cut(s) 919
PciSI GCTCTTC 3 cut(s) 468, 518, 617
PctI GAATGC 1 cut(s) 1292
PfeI GAWTC 4 cut(s) 119, 287, 780, 1319
PkrI GCNGC 5 cut(s) 331, 400, 1051, 1114, 1402
PmaCI CACGTG 1 cut(s) 961
PmlI CACGTG 1 cut(s) 961
Ppu21I YACGTR 1 cut(s) 961
Psp124BI GAGCTC 1 cut(s) 530
Psp1406I AACGTT 1 cut(s) 841
PspCI CACGTG 1 cut(s) 961
PspEI GGTNACC 1 cut(s) 817
PspN4I GGNNCC 2 cut(s) 406, 796
PspPI GGNCC 5 cut(s) 533, 1100, 1172, 1235, 1261
PspXI VCTCGAGB 1 cut(s) 1144
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 3 cut(s) 383, 406, 847
RsaNI GTAC 3 cut(s) 382, 405, 846
RseI CAYNNNNRTG 2 cut(s) 252, 1243
SacI GAGCTC 1 cut(s) 530
SalI GTCGAC 1 cut(s) 976
SapI GCTCTTC 3 cut(s) 468, 518, 617
SaqAI TTAA 1 cut(s) 1085
SatI GCNGC 5 cut(s) 330, 399, 1050, 1113, 1401
Sau3AI GATC 4 cut(s) 202, 643, 735, 906
Sau96I GGNCC 5 cut(s) 533, 1100, 1172, 1235, 1261
SduI GDGCHC 6 cut(s) 41, 463, 487, 530, 797, 972
SfaNI GCATC 1 cut(s) 1346
Sfr274I CTCGAG 1 cut(s) 1144
SinI GGWCC 2 cut(s) 533, 1235
SlaI CTCGAG 1 cut(s) 1144
SmiMI CAYNNNNRTG 2 cut(s) 252, 1243
SmlI CTYRAG 3 cut(s) 377, 1136, 1144
SmoI CTYRAG 3 cut(s) 377, 1136, 1144
SsiI CCGC 1 cut(s) 1050
SspMI CTAG 3 cut(s) 434, 1065, 1116
SstI GAGCTC 1 cut(s) 530
StyI CCWWGG 2 cut(s) 433, 1126
TaaI ACNGT 2 cut(s) 62, 595
TaiI ACGT 4 cut(s) 713, 844, 963, 1083
TaqI TCGA 6 cut(s) 646, 879, 909, 977, 999, 1145
TauI GCSGC 1 cut(s) 1052
TfiI GAWTC 4 cut(s) 119, 287, 780, 1319
Tru1I TTAA 1 cut(s) 1085
Tru9I TTAA 1 cut(s) 1085
TscAI CASTG 4 cut(s) 39, 49, 972, 1250
TseFI GTSAC 3 cut(s) 191, 279, 754
TseI GCWGC 4 cut(s) 329, 398, 1112, 1400
Tsp45I GTSAC 3 cut(s) 191, 279, 754
TspDTI ATGAA 4 cut(s) 242, 738, 852, 1303
TspRI CASTG 4 cut(s) 39, 49, 972, 1250
VpaK11BI GGWCC 2 cut(s) 533, 1235
XapI RAATTY 5 cut(s) 98, 338, 366, 1091, 1383
XceI RCATGY 2 cut(s) 811, 892
XhoI CTCGAG 1 cut(s) 1144
XmaJI CCTAGG 1 cut(s) 433
XmiI GTMKAC 1 cut(s) 977
XspI CTAG 3 cut(s) 434, 1065, 1116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.