Rmu_sc0000446.1_g000056

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000446.1
OG0000634
Physical Location & Seq
Forward (+)
264573 .. 269205
4633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000446.1_g000056.1.cds

Sequence Viewer

Length: 1332 bp
atgatgaaggacaatggttgctggagagcaggcaagcaagatcagagtcatcctatgctcagacgggttacaggtggccccatgattggttcgagttggggtcacaggatcgagtggcagcttcgttgggatctactggtttttgttcgaatcaggaataaaggggatgatggagggtggaatggtcggatcatgcttccacgacatcaagttggaggcgggacgatgagggctcacgttgaaggtgtcgatgaaaagaataagcagtggaagagggttgaagtgaagctggaagaccatgtgcatgtccccattttccccactggaatgtcacttgaatcatacgatacttactttgatgagtatataacgaagatagcatcagaaacattcccacaaagcaggccattgtgggaacttcatcttttcaagtacccaacaagtcatgcggctggacagataatattcaagatgcaccatgcccttggcgatggctactctctcatgggtgcccttctctcttgtctccaaaatgctcaaaatccttctcttcccctgacatttccttcactaaagggtgcaaagaatgaaactaatagtcgatctcgtgtgtttgagtttgtgcctaagatattttctgccgttatcaacggtgcatgggatttatgttggagcattttgaagggcacttgggttgaagatgatcgaacaccaataaggtccggtgttgatggagttgagtttcgacctttgtccgtatcgaccttgatgctgcctattgaggaaattaaacttatcaagaacaagcttggagtgacgataaatgatgtgatttcaggaacaatctttctgagcatccgaatgtacattcaagagatggataatgaaaaatcaagtagccagaattgcaccgcattggtgttgctgaatagtagacttgctgcgggttacaagtcagtgcaggagatgttgatcgaaacaaacaagtcttggggaaaccgaattgtgttcttgcccgtctcggtgcccaagtcaagtgaagttacaaagccactggattttgtgtgggaagcacataatataatcaagagacagagaaactcttcatcttggtacctcaccactaggctcttggatattttgaagaaatttagaggccctgagggtttttggaggattgaatggccaaatttcttgattttggttggagaaatggaaagaggggaggaagaggagaaaatctggaaattttggttgaaatccggcttcctgcgaccgcggcggtcggcggcgatttcaggagagaatgaagagagagaagctctcgggtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

443

Amino Acids

50.79

Weight (kDa)

9.07

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1113
AccB1I GGYRCC 3 cut(s) 509, 1024, 1113
AccI GTMKAC 1 cut(s) 934
AccII CGCG 1 cut(s) 1279
AciI CCGC 8 cut(s) 219, 449, 912, 944, 1277, 1279, 1282, 1289
AclWI GGATC 3 cut(s) 116, 138, 197
AcoI YGGCCR 1 cut(s) 1184
AcsI RAATTY 3 cut(s) 1148, 1189, 1247
AfaI GTAC 3 cut(s) 434, 866, 1115
AfiI CCNNNNNNNGG 1 cut(s) 86
AluBI AGCT 4 cut(s) 121, 289, 808, 1322
AluI AGCT 4 cut(s) 121, 289, 808, 1322
Alw26I GTCTC 3 cut(s) 530, 1024, 1084
AlwI GGATC 3 cut(s) 116, 138, 197
Ama87I CYCGRG 1 cut(s) 1325
AoxI GGCC 4 cut(s) 76, 404, 1156, 1184
ApeKI GCWGC 3 cut(s) 118, 772, 941
ApoI RAATTY 3 cut(s) 1148, 1189, 1247
Asp700I GAANNNNTTC 1 cut(s) 1102
Asp718I GGTACC 1 cut(s) 1113
AspS9I GGNCC 3 cut(s) 77, 720, 1157
AsuHPI GGTGA 1 cut(s) 1111
AsuII TTCGAA 1 cut(s) 148
AvaI CYCGRG 1 cut(s) 1325
AvaII GGWCC 1 cut(s) 720
AxyI CCTNAGG 1 cut(s) 1161
BaeGI GKGCMC 3 cut(s) 514, 689, 1029
BalI TGGCCA 1 cut(s) 1186
BanI GGYRCC 3 cut(s) 509, 1024, 1113
BanII GRGCYC 1 cut(s) 235
BauI CACGAG 1 cut(s) 606
BbsI GAAGAC 1 cut(s) 300
BbvI GCAGC 3 cut(s) 130, 759, 928
BccI CCATC 4 cut(s) 164, 485, 725, 871
BceAI ACGGC 1 cut(s) 626
BcgI CGANNNNNNTGC 2 cut(s) 751, 785
BcoDI GTCTC 3 cut(s) 530, 1024, 1084
BfaI CTAG 1 cut(s) 1125
BisI GCNGC 6 cut(s) 119, 450, 773, 942, 1280, 1290
BlsI GCNGC 6 cut(s) 120, 451, 774, 943, 1281, 1291
Bme18I GGWCC 1 cut(s) 720
BmeT110I CYCGRG 1 cut(s) 1325
BmgT120I GGNCC 3 cut(s) 77, 720, 1157
BmiI GGNNCC 4 cut(s) 79, 511, 1026, 1115
BmsI GCATC 4 cut(s) 389, 462, 759, 864
BoxI GACNNNNGTC 1 cut(s) 751
BpiI GAAGAC 1 cut(s) 300
BplI GAGNNNNNCTC 2 cut(s) 1306, 1308
BpmI CTGGAG 1 cut(s) 43
Bpu14I TTCGAA 1 cut(s) 148
BsaBI GATNNNNATC 1 cut(s) 971
BsaJI CCNNGG 2 cut(s) 484, 1277
BsaWI WCCGGW 1 cut(s) 722
Bsc4I CCNNNNNNNGG 1 cut(s) 86
Bse1I ACTGG 3 cut(s) 141, 328, 1059
Bse21I CCTNAGG 1 cut(s) 1161
Bse8I GATNNNNATC 1 cut(s) 971
BseDI CCNNGG 2 cut(s) 484, 1277
BseGI GGATG 3 cut(s) 49, 172, 855
BseJI GATNNNNATC 1 cut(s) 971
BseLI CCNNNNNNNGG 1 cut(s) 86
BseMII CTCAG 3 cut(s) 73, 842, 1152
BseNI ACTGG 3 cut(s) 141, 328, 1059
BseRI GAGGAG 1 cut(s) 1247
BseSI GKGCMC 3 cut(s) 514, 689, 1029
BseXI GCAGC 3 cut(s) 130, 759, 928
BsgI GTGCAG 1 cut(s) 980
Bsh1236I CGCG 1 cut(s) 1279
Bsh1285I CGRYCG 2 cut(s) 1277, 1286
BshFI GGCC 4 cut(s) 78, 406, 1158, 1186
BshNI GGYRCC 3 cut(s) 509, 1024, 1113
BsiEI CGRYCG 2 cut(s) 1277, 1286
BsiHKCI CYCGRG 1 cut(s) 1325
BsiSI CCGG 2 cut(s) 723, 1263
BslFI GGGAC 2 cut(s) 235, 293
BslI CCNNNNNNNGG 1 cut(s) 86
BsmAI GTCTC 3 cut(s) 530, 1024, 1084
BsmBI CGTCTC 1 cut(s) 1024
BsmFI GGGAC 2 cut(s) 235, 293
BsnI GGCC 4 cut(s) 78, 406, 1158, 1186
BsoBI CYCGRG 1 cut(s) 1325
Bsp119I TTCGAA 1 cut(s) 148
Bsp1286I GDGCHC 4 cut(s) 235, 514, 689, 1029
Bsp1407I TGTACA 1 cut(s) 864
Bsp143I GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
BspACI CCGC 8 cut(s) 219, 449, 912, 944, 1277, 1279, 1282, 1289
BspANI GGCC 4 cut(s) 78, 406, 1158, 1186
BspCNI CTCAG 3 cut(s) 72, 843, 1153
BspFNI CGCG 1 cut(s) 1279
BspLI GGNNCC 4 cut(s) 79, 511, 1026, 1115
BspPI GGATC 3 cut(s) 116, 138, 197
BspT104I TTCGAA 1 cut(s) 148
BspT107I GGYRCC 3 cut(s) 509, 1024, 1113
BsrGI TGTACA 1 cut(s) 864
BsrI ACTGG 3 cut(s) 141, 328, 1059
BssECI CCNNGG 2 cut(s) 484, 1277
BssMI GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
BssSI CACGAG 1 cut(s) 606
BssT1I CCWWGG 1 cut(s) 484
Bst2BI CACGAG 1 cut(s) 606
Bst4CI ACNGT 1 cut(s) 653
Bst6I CTCTTC 5 cut(s) 266, 555, 1108, 1224, 1305
BstAUI TGTACA 1 cut(s) 864
BstBI TTCGAA 1 cut(s) 148
BstC8I GCNNGC 3 cut(s) 31, 35, 404
BstDEI CTNAG 4 cut(s) 59, 627, 851, 1161
BstDSI CCRYGG 1 cut(s) 1277
BstF5I GGATG 3 cut(s) 49, 172, 855
BstFNI CGCG 1 cut(s) 1279
BstKTI GATC 7 cut(s) 43, 111, 133, 192, 605, 706, 975
BstMAI GTCTC 3 cut(s) 530, 1024, 1084
BstMBI GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
BstMCI CGRYCG 2 cut(s) 1277, 1286
BstMWI GCNNNNNNNGC 2 cut(s) 906, 1279
BstNSI RCATGY 1 cut(s) 308
BstPAI GACNNNNGTC 1 cut(s) 751
BstSLI GKGCMC 3 cut(s) 514, 689, 1029
BstUI CGCG 1 cut(s) 1279
BstV1I GCAGC 3 cut(s) 130, 759, 928
BstV2I GAAGAC 1 cut(s) 300
BstX2I RGATCY 1 cut(s) 130
BstXI CCANNNNNNTGG 1 cut(s) 485
BstYI RGATCY 1 cut(s) 130
Bsu36I CCTNAGG 1 cut(s) 1161
BsuRI GGCC 4 cut(s) 78, 406, 1158, 1186
BtgI CCRYGG 1 cut(s) 1277
BtgZI GCGATG 1 cut(s) 504
BtsCI GGATG 3 cut(s) 49, 172, 855
BtsI GCAGTG 1 cut(s) 272
BtsIMutI CAGTG 4 cut(s) 272, 321, 963, 1052
Cac8I GCNNGC 3 cut(s) 31, 35, 404
Cfr13I GGNCC 3 cut(s) 77, 720, 1157
Cfr42I CCGCGG 1 cut(s) 1280
Csp6I GTAC 3 cut(s) 433, 865, 1114
CviAII CATG 8 cut(s) 82, 193, 299, 305, 446, 479, 505, 657
CviQI GTAC 3 cut(s) 433, 865, 1114
DdeI CTNAG 4 cut(s) 59, 627, 851, 1161
DpnI GATC 7 cut(s) 42, 110, 132, 191, 604, 705, 974
DpnII GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
EaeI YGGCCR 1 cut(s) 1184
Eam1104I CTCTTC 5 cut(s) 266, 555, 1108, 1224, 1305
EarI CTCTTC 5 cut(s) 266, 555, 1108, 1224, 1305
Eco130I CCWWGG 1 cut(s) 484
Eco24I GRGCYC 1 cut(s) 235
Eco47I GGWCC 1 cut(s) 720
Eco81I CCTNAGG 1 cut(s) 1161
Eco88I CYCGRG 1 cut(s) 1325
EcoO109I RGGNCCY 1 cut(s) 1157
EcoT14I CCWWGG 1 cut(s) 484
EcoT38I GRGCYC 1 cut(s) 235
ErhI CCWWGG 1 cut(s) 484
Esp3I CGTCTC 1 cut(s) 1024
FaeI CATG 8 cut(s) 85, 196, 302, 308, 449, 482, 508, 660
FaqI GGGAC 2 cut(s) 235, 293
FatI CATG 8 cut(s) 81, 192, 298, 304, 445, 478, 504, 656
FauI CCCGC 2 cut(s) 212, 937
FblI GTMKAC 1 cut(s) 934
Fnu4HI GCNGC 6 cut(s) 119, 450, 773, 942, 1280, 1290
FokI GGATG 3 cut(s) 36, 179, 842
FriOI GRGCYC 1 cut(s) 235
Fsp4HI GCNGC 6 cut(s) 119, 450, 773, 942, 1280, 1290
FspBI CTAG 1 cut(s) 1125
GluI GCNGC 6 cut(s) 119, 450, 773, 942, 1280, 1290
GsuI CTGGAG 1 cut(s) 43
HaeIII GGCC 4 cut(s) 78, 406, 1158, 1186
HapII CCGG 2 cut(s) 723, 1263
Hin1II CATG 8 cut(s) 85, 196, 302, 308, 449, 482, 508, 660
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 3 cut(s) 46, 150, 338
HpaII CCGG 2 cut(s) 723, 1263
HphI GGTGA 1 cut(s) 1111
Hpy166II GTNNAC 1 cut(s) 935
Hpy188I TCNGA 6 cut(s) 45, 62, 189, 385, 852, 860
Hpy188III TCNNGA 9 cut(s) 154, 469, 799, 837, 872, 1087, 1195, 1243, 1299
Hpy8I GTNNAC 1 cut(s) 935
HpyAV CCTTC 5 cut(s) 236, 524, 555, 576, 676
HpyCH4III ACNGT 1 cut(s) 653
HpyCH4IV ACGT 1 cut(s) 237
HpyCH4V TGCA 6 cut(s) 304, 475, 581, 656, 909, 961
HpyF10VI GCNNNNNNNGC 2 cut(s) 906, 1279
HpyF3I CTNAG 4 cut(s) 59, 627, 851, 1161
HpySE526I ACGT 1 cut(s) 237
Hsp92II CATG 8 cut(s) 85, 196, 302, 308, 449, 482, 508, 660
KpnI GGTACC 1 cut(s) 1117
KspI CCGCGG 1 cut(s) 1280
Kzo9I GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
LmnI GCTCC 1 cut(s) 672
Lsp1109I GCAGC 3 cut(s) 130, 759, 928
LweI GCATC 4 cut(s) 389, 462, 759, 864
MaeI CTAG 1 cut(s) 1125
MaeII ACGT 1 cut(s) 237
MaeIII GTNAC 6 cut(s) 67, 101, 330, 814, 947, 1042
MalI GATC 7 cut(s) 42, 110, 132, 191, 604, 705, 974
MboI GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
MboII GAAGA 9 cut(s) 283, 305, 385, 542, 710, 1095, 1156, 1241, 1322
MflI RGATCY 1 cut(s) 130
MhlI GDGCHC 4 cut(s) 235, 514, 689, 1029
MlsI TGGCCA 1 cut(s) 1186
MluCI AATT 6 cut(s) 786, 904, 1002, 1148, 1189, 1247
MluNI TGGCCA 1 cut(s) 1186
MlyI GAGTC 1 cut(s) 55
MmeI TCCRAC 4 cut(s) 167, 193, 650, 1186
Mox20I TGGCCA 1 cut(s) 1186
MroXI GAANNNNTTC 1 cut(s) 1102
MscI TGGCCA 1 cut(s) 1186
MseI TTAA 1 cut(s) 789
MslI CAYNNNNRTG 3 cut(s) 303, 326, 860
Msp20I TGGCCA 1 cut(s) 1186
MspA1I CMGCKG 1 cut(s) 1279
MspI CCGG 2 cut(s) 723, 1263
MvnI CGCG 1 cut(s) 1279
MwoI GCNNNNNNNGC 2 cut(s) 906, 1279
NdeII GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
NlaIII CATG 8 cut(s) 85, 196, 302, 308, 449, 482, 508, 660
NlaIV GGNNCC 4 cut(s) 79, 511, 1026, 1115
NmuCI GTSAC 3 cut(s) 101, 330, 814
NspI RCATGY 1 cut(s) 308
NspV TTCGAA 1 cut(s) 148
PdmI GAANNNNTTC 1 cut(s) 1102
PfeI GAWTC 2 cut(s) 150, 338
PkrI GCNGC 6 cut(s) 120, 451, 774, 943, 1281, 1291
PleI GAGTC 1 cut(s) 54
PpsI GAGTC 1 cut(s) 54
PshAI GACNNNNGTC 1 cut(s) 751
PspN4I GGNNCC 4 cut(s) 79, 511, 1026, 1115
PspPI GGNCC 3 cut(s) 77, 720, 1157
PsuI RGATCY 1 cut(s) 130
RsaI GTAC 3 cut(s) 434, 866, 1115
RsaNI GTAC 3 cut(s) 433, 865, 1114
RseI CAYNNNNRTG 3 cut(s) 303, 326, 860
SacII CCGCGG 1 cut(s) 1280
SaqAI TTAA 1 cut(s) 789
SatI GCNGC 6 cut(s) 119, 450, 773, 942, 1280, 1290
Sau3AI GATC 7 cut(s) 40, 108, 130, 189, 602, 703, 972
Sau96I GGNCC 3 cut(s) 77, 720, 1157
SchI GAGTC 1 cut(s) 55
SduI GDGCHC 4 cut(s) 235, 514, 689, 1029
SfaNI GCATC 4 cut(s) 389, 462, 759, 864
Sfr303I CCGCGG 1 cut(s) 1280
SfuI TTCGAA 1 cut(s) 148
SgrBI CCGCGG 1 cut(s) 1280
SinI GGWCC 1 cut(s) 720
SmiMI CAYNNNNRTG 3 cut(s) 303, 326, 860
Sse9I AATT 6 cut(s) 786, 904, 1002, 1148, 1189, 1247
SsiI CCGC 8 cut(s) 219, 449, 912, 944, 1277, 1279, 1282, 1289
SspI AATATT 1 cut(s) 465
SspMI CTAG 1 cut(s) 1125
StyI CCWWGG 1 cut(s) 484
TaaI ACNGT 1 cut(s) 653
TaiI ACGT 1 cut(s) 240
TaqI TCGA 9 cut(s) 92, 111, 148, 249, 601, 706, 745, 761, 975
TasI AATT 6 cut(s) 786, 904, 1002, 1148, 1189, 1247
TatI WGTACW 1 cut(s) 864
TauI GCSGC 3 cut(s) 452, 1282, 1292
TfiI GAWTC 2 cut(s) 150, 338
Tru1I TTAA 1 cut(s) 789
Tru9I TTAA 1 cut(s) 789
TscAI CASTG 4 cut(s) 272, 328, 963, 1059
TseFI GTSAC 3 cut(s) 101, 330, 814
TseI GCWGC 3 cut(s) 118, 772, 941
Tsp45I GTSAC 3 cut(s) 101, 330, 814
TspDTI ATGAA 7 cut(s) 20, 267, 410, 603, 900, 1095, 1323
TspGWI ACGGA 1 cut(s) 745
TspRI CASTG 4 cut(s) 272, 328, 963, 1059
VpaK11BI GGWCC 1 cut(s) 720
XapI RAATTY 3 cut(s) 1148, 1189, 1247
XceI RCATGY 1 cut(s) 308
XcmI CCANNNNNNNNNTGG 1 cut(s) 1129
XmiI GTMKAC 1 cut(s) 934
XmnI GAANNNNTTC 1 cut(s) 1102
XspI CTAG 1 cut(s) 1125
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.