Prupe.4G257800_v2.0.a1

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000634
Physical Location & Seq
Forward (+)
18302708 .. 18307625
4918 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G257800.2

Sequence Viewer

Length: 1410 bp
ATGGAGTTTAGGGAGGAAGGAGAAGGAGAGCCTGTGAGCCCCACTGGCCAATACTTCAACAGTTCTATCTTGTCTGTTGCAATTCTTGCAGTTTTGGAATTTGAGGTTCCATTCAATGATTCCCAAGCTCTCTCTTTGCTTCAAGATGTCTTTCTCCCTATCAACCCTCGCTTCTCTTCTATCATGATAAGTGACAAGGCAGATCAAAAGAAACAATGGAAGAGGGTTGAAGTAAAGCTTGAAGACCATGTTCGTGTCCCCATTTTCCCTTCTAACATGTCACCAGAATCCTATGATGAGTATTTTGATAACTACATATCAAATATAGCAGCAGAAAGACTCCCACAAAACAGGCCATTATGGGAAATTCACATTCTCAAGTACCCAACAAGCCATGCAGCCGGTACCCTGATTTTCAAGCTTCACCATGCCCTAGGTGATGGCTACTCTCTAATGGGTGCTCTTCTTTCTTGTCTGCAAACTGCTCAAAACCCTTCTGTTCCTCTAACATTTCCTTCCCTGAAGAGCTCATCAGGACCAAAAACTACTCACATGACTAAAACTGTGTCTCAGTTTTTCTCTTCAGTTTTCCAAACTCTATCGGATTTCAGTTGGAGCATTTTGAAGAGCAGTTTCGTAGAAGATGATCGAACTCCGATTAGGTCTGGGGAAGATGGAGTTGAGTTTCGGCCAATAACACTATCAACCTTGACGTTCTCCATTGATGAAATCAAACTGATCAAGAACAAACTTCGAGTGACGATAAATGATGTGATTGCTGGAATAATATTCTTGGGCACCAGAATATACATGCAAGAGGTTACCCAAAAATCAAGCAATGAACGTTGTACGGCATTGGTGCTGCTCAGAACCAGAAACATGGAGGGTTACTTGTCAACTAAAGAGATGATCGAACCCAATAATGCTAATATGTCATGGGGAAACCAATTTGCCTTTTTACACTTGCCAGTGCCCAAGTCAAGTGAAACTTTAAACCCACTCGACTTTGTTTGGGAAGCACAAAAGATGATCAAGAAAAAGAAAAGTTCTGCGGCTAGCTACCTCACTAGTTGGCTGTTGGACGTTTTGAAGAAATTTAGAGGCCCCGAGGGAGCAGCTAGATACATTCATGGCACGCTCAAGAACTCGAGCATGACAATCTCGAATATGATTGGGCCAGTTGAAAAAATGGCTTTGGACAATCAGCCCGTTGGTGGCTTATACTTTATGGTGGTTGGTCCACCTCAGTGTCTTACTGTGACTGCACTTAGTTATATGGGAAAGCTGAGGGTTGCCTTCGGAGCTGAAAAAGGCTTCATAGATTCCCAGAAATTGAAGGCGTCCATGCAAAATGCCTTTGGGATAATACTCGAAGCCTCCAACCCAATTCCTCCTGCAAAGGCAGCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

470

Amino Acids

52.33

Weight (kDa)

8.21

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 404
AccB1I GGYRCC 2 cut(s) 404, 797
AciI CCGC 1 cut(s) 1052
AclI AACGTT 1 cut(s) 844
AcoI YGGCCR 2 cut(s) 46, 689
AcsI RAATTY 3 cut(s) 98, 366, 1094
AcuI CTGAAG 2 cut(s) 542, 567
AcyI GRCGYC 1 cut(s) 1340
AfaI GTAC 3 cut(s) 383, 406, 850
AfiI CCNNNNNNNGG 1 cut(s) 1214
AflIII ACRYGT 1 cut(s) 276
AhlI ACTAGT 1 cut(s) 1067
AleI CACNNNNGTG 1 cut(s) 1246
AluBI AGCT 8 cut(s) 128, 238, 421, 528, 1059, 1118, 1285, 1304
AluI AGCT 8 cut(s) 128, 238, 421, 528, 1059, 1118, 1285, 1304
Alw21I GWGCWC 2 cut(s) 463, 530
Alw26I GTCTC 1 cut(s) 573
Ama87I CYCGRG 2 cut(s) 1106, 1147
AoxI GGCC 5 cut(s) 46, 353, 689, 1102, 1175
ApeKI GCWGC 5 cut(s) 329, 398, 862, 1115, 1403
ApoI RAATTY 3 cut(s) 98, 366, 1094
Asp718I GGTACC 1 cut(s) 404
AspA2I CCTAGG 1 cut(s) 433
AspS9I GGNCC 4 cut(s) 536, 1103, 1175, 1238
AsuHPI GGTGA 3 cut(s) 273, 416, 449
AsuNHI GCTAGC 1 cut(s) 1055
AvaI CYCGRG 2 cut(s) 1106, 1147
AvaII GGWCC 2 cut(s) 536, 1238
AvrII CCTAGG 1 cut(s) 433
BaeGI GKGCMC 2 cut(s) 800, 975
BalI TGGCCA 1 cut(s) 48
BanI GGYRCC 2 cut(s) 404, 797
BanII GRGCYC 2 cut(s) 41, 530
BbsI GAAGAC 1 cut(s) 249
Bbv12I GWGCWC 2 cut(s) 463, 530
BbvCI CCTCAGC 1 cut(s) 1286
BbvI GCAGC 4 cut(s) 341, 410, 849, 1127
BccI CCATC 2 cut(s) 434, 668
BceAI ACGGC 1 cut(s) 867
BclI TGATCA 2 cut(s) 738, 1029
BcoDI GTCTC 1 cut(s) 573
BcuI ACTAGT 1 cut(s) 1067
BfaI CTAG 4 cut(s) 434, 1056, 1068, 1119
BglI GCCNNNNNGGC 1 cut(s) 45
BisI GCNGC 6 cut(s) 330, 399, 863, 1053, 1116, 1404
BlnI CCTAGG 1 cut(s) 433
BlsI GCNGC 6 cut(s) 331, 400, 864, 1054, 1117, 1405
Bme18I GGWCC 2 cut(s) 536, 1238
BmeT110I CYCGRG 2 cut(s) 1106, 1147
BmgT120I GGNCC 4 cut(s) 536, 1103, 1175, 1238
BmiI GGNNCC 4 cut(s) 108, 406, 799, 1105
BmtI GCTAGC 1 cut(s) 1059
BpiI GAAGAC 1 cut(s) 249
Bpu10I CCTNAGC 1 cut(s) 1286
BpuEI CTTGAG 2 cut(s) 362, 1124
BsaHI GRCGYC 1 cut(s) 1340
BsaJI CCNNGG 2 cut(s) 433, 1107
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
Bsc4I CCNNNNNNNGG 1 cut(s) 1214
Bse118I RCCGGY 1 cut(s) 401
Bse1I ACTGG 3 cut(s) 49, 968, 1178
Bse3DI GCAATG 1 cut(s) 844
BseDI CCNNGG 2 cut(s) 433, 1107
BseLI CCNNNNNNNGG 1 cut(s) 1214
BseMI GCAATG 1 cut(s) 844
BseMII CTCAG 4 cut(s) 584, 880, 1259, 1277
BseNI ACTGG 3 cut(s) 49, 968, 1178
BseSI GKGCMC 2 cut(s) 800, 975
BseXI GCAGC 4 cut(s) 341, 410, 849, 1127
BsgI GTGCAG 1 cut(s) 1248
BshFI GGCC 5 cut(s) 48, 355, 691, 1104, 1177
BshNI GGYRCC 2 cut(s) 404, 797
BsiHKAI GWGCWC 2 cut(s) 463, 530
BsiHKCI CYCGRG 2 cut(s) 1106, 1147
BsiSI CCGG 1 cut(s) 402
BslFI GGGAC 1 cut(s) 242
BslI CCNNNNNNNGG 1 cut(s) 1214
BsmAI GTCTC 1 cut(s) 573
BsmFI GGGAC 1 cut(s) 242
BsnI GGCC 5 cut(s) 48, 355, 691, 1104, 1177
BsoBI CYCGRG 2 cut(s) 1106, 1147
Bsp1286I GDGCHC 5 cut(s) 41, 463, 530, 800, 975
Bsp143I GATC 5 cut(s) 202, 646, 738, 909, 1029
BspACI CCGC 1 cut(s) 1052
BspANI GGCC 5 cut(s) 48, 355, 691, 1104, 1177
BspCNI CTCAG 4 cut(s) 583, 879, 1258, 1278
BspHI TCATGA 1 cut(s) 183
BspLI GGNNCC 4 cut(s) 108, 406, 799, 1105
BspOI GCTAGC 1 cut(s) 1059
BspQI GCTCTTC 3 cut(s) 468, 518, 620
BspT107I GGYRCC 2 cut(s) 404, 797
BsrDI GCAATG 1 cut(s) 844
BsrFI RCCGGY 1 cut(s) 401
BsrI ACTGG 3 cut(s) 49, 968, 1178
BssAI RCCGGY 1 cut(s) 401
BssECI CCNNGG 2 cut(s) 433, 1107
BssMI GATC 5 cut(s) 202, 646, 738, 909, 1029
BssNI GRCGYC 1 cut(s) 1340
BssT1I CCWWGG 1 cut(s) 433
Bst4CI ACNGT 3 cut(s) 62, 565, 1258
Bst6I CTCTTC 6 cut(s) 181, 215, 468, 518, 586, 620
BstACI GRCGYC 1 cut(s) 1340
BstAPI GCANNNNNTGC 1 cut(s) 86
BstC8I GCNNGC 2 cut(s) 1057, 1136
BstDEI CTNAG 5 cut(s) 570, 866, 1245, 1268, 1286
BstEII GGTNACC 1 cut(s) 820
BstKTI GATC 5 cut(s) 205, 649, 741, 912, 1032
BstMAI GTCTC 1 cut(s) 573
BstMBI GATC 5 cut(s) 202, 646, 738, 909, 1029
BstMWI GCNNNNNNNGC 4 cut(s) 45, 86, 1301, 1403
BstNSI RCATGY 2 cut(s) 280, 814
BstPI GGTNACC 1 cut(s) 820
BstSLI GKGCMC 2 cut(s) 800, 975
BstV1I GCAGC 4 cut(s) 341, 410, 849, 1127
BstV2I GAAGAC 1 cut(s) 249
BstXI CCANNNNNNTGG 1 cut(s) 880
BsuRI GGCC 5 cut(s) 48, 355, 691, 1104, 1177
BtsIMutI CAGTG 3 cut(s) 42, 975, 1253
Cac8I GCNNGC 2 cut(s) 1057, 1136
CciI TCATGA 1 cut(s) 183
Cfr10I RCCGGY 1 cut(s) 401
Cfr13I GGNCC 4 cut(s) 536, 1103, 1175, 1238
CseI GACGC 1 cut(s) 1329
Csp6I GTAC 3 cut(s) 382, 405, 849
CviQI GTAC 3 cut(s) 382, 405, 849
DdeI CTNAG 5 cut(s) 570, 866, 1245, 1268, 1286
DpnI GATC 5 cut(s) 204, 648, 740, 911, 1031
DpnII GATC 5 cut(s) 202, 646, 738, 909, 1029
DraI TTTAAA 1 cut(s) 993
EaeI YGGCCR 2 cut(s) 46, 689
Eam1104I CTCTTC 6 cut(s) 181, 215, 468, 518, 586, 620
EarI CTCTTC 6 cut(s) 181, 215, 468, 518, 586, 620
Ecl136II GAGCTC 1 cut(s) 528
Eco130I CCWWGG 1 cut(s) 433
Eco24I GRGCYC 2 cut(s) 41, 530
Eco47I GGWCC 2 cut(s) 536, 1238
Eco53kI GAGCTC 1 cut(s) 528
Eco57I CTGAAG 2 cut(s) 542, 567
Eco88I CYCGRG 2 cut(s) 1106, 1147
Eco91I GGTNACC 1 cut(s) 820
EcoICRI GAGCTC 1 cut(s) 528
EcoO109I RGGNCCY 1 cut(s) 1103
EcoO65I GGTNACC 1 cut(s) 820
EcoT14I CCWWGG 1 cut(s) 433
EcoT38I GRGCYC 2 cut(s) 41, 530
ErhI CCWWGG 1 cut(s) 433
FalI AAGNNNNNCTT 4 cut(s) 222, 254, 973, 1005
FaqI GGGAC 1 cut(s) 242
FbaI TGATCA 2 cut(s) 738, 1029
Fnu4HI GCNGC 6 cut(s) 330, 399, 863, 1053, 1116, 1404
FriOI GRGCYC 2 cut(s) 41, 530
Fsp4HI GCNGC 6 cut(s) 330, 399, 863, 1053, 1116, 1404
FspBI CTAG 4 cut(s) 434, 1056, 1068, 1119
GluI GCNGC 6 cut(s) 330, 399, 863, 1053, 1116, 1404
HaeIII GGCC 5 cut(s) 48, 355, 691, 1104, 1177
HapII CCGG 1 cut(s) 402
HgaI GACGC 1 cut(s) 1329
Hin1I GRCGYC 1 cut(s) 1340
HincII GTYRAC 1 cut(s) 897
HindII GTYRAC 1 cut(s) 897
HindIII AAGCTT 2 cut(s) 236, 419
HinfI GANTC 4 cut(s) 119, 287, 339, 1322
HpaII CCGG 1 cut(s) 402
HphI GGTGA 3 cut(s) 273, 416, 449
Hpy166II GTNNAC 2 cut(s) 897, 1241
Hpy188I TCNGA 4 cut(s) 604, 657, 869, 1301
Hpy188III TCNNGA 7 cut(s) 143, 184, 534, 742, 1033, 1141, 1162
Hpy8I GTNNAC 2 cut(s) 897, 1241
HpyAV CCTTC 7 cut(s) 11, 17, 279, 504, 525, 1306, 1330
HpyCH4III ACNGT 3 cut(s) 62, 565, 1258
HpyCH4IV ACGT 3 cut(s) 713, 844, 1083
HpyCH4V TGCA 8 cut(s) 80, 89, 398, 478, 814, 1265, 1348, 1397
HpyF10VI GCNNNNNNNGC 4 cut(s) 45, 86, 1301, 1403
HpyF3I CTNAG 5 cut(s) 570, 866, 1245, 1268, 1286
HpySE526I ACGT 3 cut(s) 713, 844, 1083
Hsp92I GRCGYC 1 cut(s) 1340
KpnI GGTACC 1 cut(s) 408
Ksp22I TGATCA 2 cut(s) 738, 1029
Kzo9I GATC 5 cut(s) 202, 646, 738, 909, 1029
LguI GCTCTTC 3 cut(s) 468, 518, 620
LmnI GCTCC 3 cut(s) 615, 1112, 1301
Lsp1109I GCAGC 4 cut(s) 341, 410, 849, 1127
MaeI CTAG 4 cut(s) 434, 1056, 1068, 1119
MaeII ACGT 3 cut(s) 713, 844, 1083
MaeIII GTNAC 6 cut(s) 191, 279, 757, 820, 887, 1258
MalI GATC 5 cut(s) 204, 648, 740, 911, 1031
MboI GATC 5 cut(s) 202, 646, 738, 909, 1029
MhlI GDGCHC 5 cut(s) 41, 463, 530, 800, 975
MlsI TGGCCA 1 cut(s) 48
MluCI AATT 7 cut(s) 81, 98, 366, 947, 1094, 1331, 1386
MluNI TGGCCA 1 cut(s) 48
MlyI GAGTC 1 cut(s) 333
MmeI TCCRAC 3 cut(s) 593, 1059, 1404
Mox20I TGGCCA 1 cut(s) 48
MscI TGGCCA 1 cut(s) 48
MseI TTAA 1 cut(s) 992
MslI CAYNNNNRTG 2 cut(s) 252, 1246
Msp20I TGGCCA 1 cut(s) 48
MspI CCGG 1 cut(s) 402
MwoI GCNNNNNNNGC 4 cut(s) 45, 86, 1301, 1403
NdeII GATC 5 cut(s) 202, 646, 738, 909, 1029
NheI GCTAGC 1 cut(s) 1055
NlaIV GGNNCC 4 cut(s) 108, 406, 799, 1105
NmuCI GTSAC 4 cut(s) 191, 279, 757, 1258
NspI RCATGY 2 cut(s) 280, 814
OliI CACNNNNGTG 1 cut(s) 1246
PaeR7I CTCGAG 1 cut(s) 1147
PagI TCATGA 1 cut(s) 183
PciI ACATGT 1 cut(s) 276
PciSI GCTCTTC 3 cut(s) 468, 518, 620
PfeI GAWTC 3 cut(s) 119, 287, 1322
PkrI GCNGC 6 cut(s) 331, 400, 864, 1054, 1117, 1405
PleI GAGTC 1 cut(s) 333
PpsI GAGTC 1 cut(s) 333
PscI ACATGT 1 cut(s) 276
Psp124BI GAGCTC 1 cut(s) 530
Psp1406I AACGTT 1 cut(s) 844
PspEI GGTNACC 1 cut(s) 820
PspN4I GGNNCC 4 cut(s) 108, 406, 799, 1105
PspPI GGNCC 4 cut(s) 536, 1103, 1175, 1238
PspXI VCTCGAGB 1 cut(s) 1147
RsaI GTAC 3 cut(s) 383, 406, 850
RsaNI GTAC 3 cut(s) 382, 405, 849
RseI CAYNNNNRTG 2 cut(s) 252, 1246
SacI GAGCTC 1 cut(s) 530
SapI GCTCTTC 3 cut(s) 468, 518, 620
SaqAI TTAA 1 cut(s) 992
SatI GCNGC 6 cut(s) 330, 399, 863, 1053, 1116, 1404
Sau3AI GATC 5 cut(s) 202, 646, 738, 909, 1029
Sau96I GGNCC 4 cut(s) 536, 1103, 1175, 1238
SchI GAGTC 1 cut(s) 333
SduI GDGCHC 5 cut(s) 41, 463, 530, 800, 975
Sfr274I CTCGAG 1 cut(s) 1147
SinI GGWCC 2 cut(s) 536, 1238
SlaI CTCGAG 1 cut(s) 1147
SmiMI CAYNNNNRTG 2 cut(s) 252, 1246
SmlI CTYRAG 3 cut(s) 377, 1139, 1147
SmoI CTYRAG 3 cut(s) 377, 1139, 1147
SpeI ACTAGT 1 cut(s) 1067
Sse9I AATT 7 cut(s) 81, 98, 366, 947, 1094, 1331, 1386
SsiI CCGC 1 cut(s) 1052
SspI AATATT 1 cut(s) 789
SspMI CTAG 4 cut(s) 434, 1056, 1068, 1119
SstI GAGCTC 1 cut(s) 530
StyI CCWWGG 1 cut(s) 433
TaaI ACNGT 3 cut(s) 62, 565, 1258
TaiI ACGT 3 cut(s) 716, 847, 1086
TaqI TCGA 7 cut(s) 649, 754, 912, 1002, 1148, 1163, 1371
TasI AATT 7 cut(s) 81, 98, 366, 947, 1094, 1331, 1386
TauI GCSGC 1 cut(s) 1055
TfiI GAWTC 3 cut(s) 119, 287, 1322
Tru1I TTAA 1 cut(s) 992
Tru9I TTAA 1 cut(s) 992
TscAI CASTG 3 cut(s) 49, 975, 1253
TseFI GTSAC 4 cut(s) 191, 279, 757, 1258
TseI GCWGC 5 cut(s) 329, 398, 862, 1115, 1403
Tsp45I GTSAC 4 cut(s) 191, 279, 757, 1258
TspDTI ATGAA 4 cut(s) 741, 855, 1118, 1306
TspRI CASTG 3 cut(s) 49, 975, 1253
VpaK11BI GGWCC 2 cut(s) 536, 1238
XapI RAATTY 3 cut(s) 98, 366, 1094
XceI RCATGY 2 cut(s) 280, 814
XhoI CTCGAG 1 cut(s) 1147
XmaJI CCTAGG 1 cut(s) 433
XspI CTAG 4 cut(s) 434, 1056, 1068, 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.