Rw5G031910

Wax ester synthase-like Acyl-CoA acyltransferase domain

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Reverse (-)
53333573 .. 53349118
15546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G031910.1

Sequence Viewer

Length: 1407 bp
ATGGAGTTTGGCGAAGGAGGACTACCACAAGAGCCGGTGAGCCCGGGAAGTCAATTACTCAACAGCTCTGTCTTATCTCTTGCAATTCTTGCCGTTTTGGAATCACAAGTTCCAGTCGACGATTCTCAAACTTTTTTGCTCCTTAAAAATGTCTTCCTCCCGATTAATCCACGCTTCTCTTCCATCATGGTTGAAGGTGTGGATGAAAAGAATAAGCAGTGGAAGAGGGTTGAAGTGAAGCTGGAAGACCATGTGCATGTCCCCATTTTCCCCTCTGGAATGTCACTTGAATCATACGATACATACTTTGATGAGTATATAACGAAGATAGCATCAGAAACATTCCCACAAAGCAGGCCATTGTGGGAACTTCATCTTTTCAAGTACCCAACAAGTCATGCAGCTGGACAGATAATATTCAAGATCCACCATGCCCTTGGCGATGGCTACTCTCTCATGGGTGCTCTTCTCTCTTGTCTCCAAAATGCTCAAAATCCTTCTCTTCCCCTGACATTTCCTTCACTAAAGGGTGCAAAGAATGAAGCTAATAGTCGATCCCGTGTGTTTGAGTTTGTGCCTAAGATATTTTCTGCCGTCATCAACGGTGCATGGGATTCATGTTGGAGCATTTTGAAGGGCATTTGGGTTGAAGATGATCGAACACCAATAAGGTCCGGCGTTGATGGAGTTGAGTTTCGACCTTTGTCCGTGTCGACCTTGAAGCTGCCTATTGAGGAAATTAAACTTATCAAGAACAAGCTTGGAGTGACGATAAATGATGTGATTTCAGGAACAATCTTTCTGGGCATCCGAATGTACATTCAAGAGATGGATAATGAAAAATCAAGTAGCCAGAATTGCACCGCATTGGTGTTGCTGAATAGTAGACTTGCTGCGGGTTACAAGTCAGTGCAGGAGATGTTGATCGAAACAAACAAGTCTTGGGGAAACCGAATTGTGTTCTTGCCCGTCTCAGTGCCCAAGTCAAGTGAAGTTACAAAGCCACTGGATTTTGTGTGGGAAGCACATAATATAATCAAGAGACAGAGAAACTCTTCATCTTGGTACCTCACCACTAGGCTCTTGGATATTTTGAAGAAATTTAGAGGCCCTGAGGTAGTATCTAAATATATCTATAATACACTGAAAAACTCAAGCACAGGAATCACAAATATGATTGGACCATTGGAACAAATGAGTATCGCCAATCACCCCATTAAAGGAATTTACTTTATAGTGACCGGTGCACCTCAGTGTCTTGCTATAACAGCAATGAGTTATATGGGAAAGCTAAGGATTGCCTTTGGAGCTGAAAAAGGCTTCATAGATACTAATGTATTGCAGGCATGCATGATAGATGCCTTTCGGGGGATATGCGAAGCTGCGAATGAATTTCCTATCAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

468

Amino Acids

52.22

Weight (kDa)

7.61

Isoelectric Point (pI)

45.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 70 - 262 2.9e-10 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 315 - 458 2.5e-34 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1065
AccB1I GGYRCC 1 cut(s) 1065
AccI GTMKAC 3 cut(s) 117, 713, 886
AciI CCGC 2 cut(s) 864, 896
AclWI GGATC 2 cut(s) 418, 549
AcsI RAATTY 3 cut(s) 1100, 1224, 1391
AfaI GTAC 3 cut(s) 386, 818, 1067
AfiI CCNNNNNNNGG 2 cut(s) 1220, 1368
AgeI ACCGGT 1 cut(s) 1241
AleI CACNNNNGTG 1 cut(s) 1252
AluBI AGCT 9 cut(s) 66, 241, 404, 545, 724, 760, 1291, 1310, 1382
AluI AGCT 9 cut(s) 66, 241, 404, 545, 724, 760, 1291, 1310, 1382
Alw21I GWGCWC 2 cut(s) 466, 1249
Alw26I GTCTC 3 cut(s) 482, 976, 1036
Alw44I GTGCAC 1 cut(s) 1245
AlwI GGATC 2 cut(s) 418, 549
Ama87I CYCGRG 1 cut(s) 43
AoxI GGCC 2 cut(s) 356, 1108
ApaLI GTGCAC 1 cut(s) 1245
ApeKI GCWGC 4 cut(s) 401, 724, 893, 1382
ApoI RAATTY 3 cut(s) 1100, 1224, 1391
AseI ATTAAT 1 cut(s) 165
AsiGI ACCGGT 1 cut(s) 1241
Asp700I GAANNNNTTC 1 cut(s) 1054
Asp718I GGTACC 1 cut(s) 1065
AspS9I GGNCC 3 cut(s) 672, 1109, 1181
AsuC2I CCSGG 2 cut(s) 44, 45
AsuHPI GGTGA 3 cut(s) 49, 1063, 1202
AvaI CYCGRG 1 cut(s) 43
AvaII GGWCC 2 cut(s) 672, 1181
AxyI CCTNAGG 1 cut(s) 1113
BaeGI GKGCMC 2 cut(s) 981, 1249
BaeI ACNNNNGTAYC 2 cut(s) 1320, 1353
BanI GGYRCC 1 cut(s) 1065
BanII GRGCYC 1 cut(s) 44
BarI GAAGNNNNNNTAC 1 cut(s) 38
BbsI GAAGAC 2 cut(s) 145, 252
Bbv12I GWGCWC 2 cut(s) 466, 1249
BbvI GCAGC 4 cut(s) 413, 711, 880, 1369
BccI CCATC 4 cut(s) 191, 437, 677, 823
BceAI ACGGC 2 cut(s) 77, 578
BcnI CCSGG 2 cut(s) 44, 45
BcoDI GTCTC 3 cut(s) 482, 976, 1036
BfaI CTAG 1 cut(s) 1077
BisI GCNGC 4 cut(s) 402, 725, 894, 1383
BlsI GCNGC 4 cut(s) 403, 726, 895, 1384
Bme1390I CCNGG 2 cut(s) 44, 45
Bme18I GGWCC 2 cut(s) 672, 1181
BmeT110I CYCGRG 1 cut(s) 43
BmgT120I GGNCC 3 cut(s) 672, 1109, 1181
BmiI GGNNCC 1 cut(s) 1067
BmrFI CCNGG 2 cut(s) 44, 45
BmsI GCATC 3 cut(s) 341, 816, 1348
BoxI GACNNNNGTC 1 cut(s) 703
BpiI GAAGAC 2 cut(s) 145, 252
Bpu10I CCTNAGC 1 cut(s) 1292
BpuEI CTTGAG 1 cut(s) 1138
BpuMI CCSGG 2 cut(s) 44, 45
BsaBI GATNNNNATC 1 cut(s) 923
BsaJI CCNNGG 2 cut(s) 43, 436
BsaWI WCCGGW 1 cut(s) 1241
Bsc4I CCNNNNNNNGG 2 cut(s) 1220, 1368
Bse118I RCCGGY 2 cut(s) 34, 1241
Bse1I ACTGG 2 cut(s) 113, 1011
Bse21I CCTNAGG 1 cut(s) 1113
Bse3DI GCAATG 1 cut(s) 1278
Bse8I GATNNNNATC 1 cut(s) 923
BseDI CCNNGG 2 cut(s) 43, 436
BseGI GGATG 2 cut(s) 208, 807
BseJI GATNNNNATC 1 cut(s) 923
BseLI CCNNNNNNNGG 2 cut(s) 1220, 1368
BseMI GCAATG 1 cut(s) 1278
BseMII CTCAG 3 cut(s) 987, 1104, 1265
BseNI ACTGG 2 cut(s) 113, 1011
BseSI GKGCMC 2 cut(s) 981, 1249
BseXI GCAGC 4 cut(s) 413, 711, 880, 1369
BsgI GTGCAG 1 cut(s) 932
BshFI GGCC 2 cut(s) 358, 1110
BshNI GGYRCC 1 cut(s) 1065
BshTI ACCGGT 1 cut(s) 1241
BsiHKAI GWGCWC 2 cut(s) 466, 1249
BsiHKCI CYCGRG 1 cut(s) 43
BsiSI CCGG 4 cut(s) 35, 44, 675, 1242
BslFI GGGAC 1 cut(s) 245
BslI CCNNNNNNNGG 2 cut(s) 1220, 1368
BsmAI GTCTC 3 cut(s) 482, 976, 1036
BsmBI CGTCTC 1 cut(s) 976
BsmFI GGGAC 1 cut(s) 245
BsnI GGCC 2 cut(s) 358, 1110
BsoBI CYCGRG 1 cut(s) 43
Bsp1286I GDGCHC 4 cut(s) 44, 466, 981, 1249
Bsp1407I TGTACA 1 cut(s) 816
Bsp143I GATC 4 cut(s) 423, 554, 655, 924
BspACI CCGC 2 cut(s) 864, 896
BspANI GGCC 2 cut(s) 358, 1110
BspCNI CTCAG 3 cut(s) 986, 1105, 1264
BspLI GGNNCC 1 cut(s) 1067
BspPI GGATC 2 cut(s) 418, 549
BspQI GCTCTTC 1 cut(s) 471
BspT107I GGYRCC 1 cut(s) 1065
BsrDI GCAATG 1 cut(s) 1278
BsrFI RCCGGY 2 cut(s) 34, 1241
BsrGI TGTACA 1 cut(s) 816
BsrI ACTGG 2 cut(s) 113, 1011
BssAI RCCGGY 2 cut(s) 34, 1241
BssECI CCNNGG 2 cut(s) 43, 436
BssMI GATC 4 cut(s) 423, 554, 655, 924
BssT1I CCWWGG 1 cut(s) 436
Bst4CI ACNGT 1 cut(s) 605
Bst6I CTCTTC 5 cut(s) 184, 218, 471, 507, 1060
BstAPI GCANNNNNTGC 1 cut(s) 89
BstAUI TGTACA 1 cut(s) 816
BstC8I GCNNGC 3 cut(s) 356, 1344, 1348
BstDEI CTNAG 5 cut(s) 579, 973, 1113, 1251, 1292
BstF5I GGATG 2 cut(s) 208, 807
BstKTI GATC 4 cut(s) 426, 557, 658, 927
BstMAI GTCTC 3 cut(s) 482, 976, 1036
BstMBI GATC 4 cut(s) 423, 554, 655, 924
BstMWI GCNNNNNNNGC 4 cut(s) 89, 858, 1268, 1307
BstNSI RCATGY 2 cut(s) 260, 1350
BstPAI GACNNNNGTC 1 cut(s) 703
BstSCI CCNGG 2 cut(s) 42, 43
BstSLI GKGCMC 2 cut(s) 981, 1249
BstV1I GCAGC 4 cut(s) 413, 711, 880, 1369
BstV2I GAAGAC 2 cut(s) 145, 252
BstX2I RGATCY 1 cut(s) 423
BstXI CCANNNNNNTGG 1 cut(s) 437
BstYI RGATCY 1 cut(s) 423
Bsu36I CCTNAGG 1 cut(s) 1113
BsuRI GGCC 2 cut(s) 358, 1110
BtgZI GCGATG 1 cut(s) 456
BtsCI GGATG 2 cut(s) 208, 807
BtsI GCAGTG 1 cut(s) 224
BtsIMutI CAGTG 6 cut(s) 224, 915, 981, 1004, 1142, 1259
Cac8I GCNNGC 3 cut(s) 356, 1344, 1348
Cfr10I RCCGGY 2 cut(s) 34, 1241
Cfr13I GGNCC 3 cut(s) 672, 1109, 1181
Cfr9I CCCGGG 1 cut(s) 43
Csp6I GTAC 3 cut(s) 385, 817, 1066
CspAI ACCGGT 1 cut(s) 1241
CviQI GTAC 3 cut(s) 385, 817, 1066
DdeI CTNAG 5 cut(s) 579, 973, 1113, 1251, 1292
DpnI GATC 4 cut(s) 425, 556, 657, 926
DpnII GATC 4 cut(s) 423, 554, 655, 924
Eam1104I CTCTTC 5 cut(s) 184, 218, 471, 507, 1060
EarI CTCTTC 5 cut(s) 184, 218, 471, 507, 1060
Eco130I CCWWGG 1 cut(s) 436
Eco24I GRGCYC 1 cut(s) 44
Eco47I GGWCC 2 cut(s) 672, 1181
Eco81I CCTNAGG 1 cut(s) 1113
Eco88I CYCGRG 1 cut(s) 43
EcoO109I RGGNCCY 1 cut(s) 1109
EcoT14I CCWWGG 1 cut(s) 436
EcoT22I ATGCAT 1 cut(s) 1352
EcoT38I GRGCYC 1 cut(s) 44
ErhI CCWWGG 1 cut(s) 436
Esp3I CGTCTC 1 cut(s) 976
FaqI GGGAC 1 cut(s) 245
FauI CCCGC 1 cut(s) 889
FblI GTMKAC 3 cut(s) 117, 713, 886
Fnu4HI GCNGC 4 cut(s) 402, 725, 894, 1383
FokI GGATG 2 cut(s) 215, 794
FriOI GRGCYC 1 cut(s) 44
Fsp4HI GCNGC 4 cut(s) 402, 725, 894, 1383
FspBI CTAG 1 cut(s) 1077
GluI GCNGC 4 cut(s) 402, 725, 894, 1383
HaeIII GGCC 2 cut(s) 358, 1110
HapII CCGG 4 cut(s) 35, 44, 675, 1242
HincII GTYRAC 2 cut(s) 118, 714
HindII GTYRAC 2 cut(s) 118, 714
HindIII AAGCTT 1 cut(s) 758
HinfI GANTC 5 cut(s) 101, 122, 290, 614, 1164
HpaII CCGG 4 cut(s) 35, 44, 675, 1242
HphI GGTGA 3 cut(s) 49, 1063, 1202
Hpy166II GTNNAC 4 cut(s) 118, 714, 887, 1247
Hpy188I TCNGA 2 cut(s) 337, 812
Hpy188III TCNNGA 7 cut(s) 160, 276, 421, 751, 789, 824, 1039
Hpy8I GTNNAC 4 cut(s) 118, 714, 887, 1247
Hpy99I CGWCG 1 cut(s) 122
HpyAV CCTTC 5 cut(s) 8, 188, 507, 528, 628
HpyCH4III ACNGT 1 cut(s) 605
HpyF10VI GCNNNNNNNGC 4 cut(s) 89, 858, 1268, 1307
HpyF3I CTNAG 5 cut(s) 579, 973, 1113, 1251, 1292
KpnI GGTACC 1 cut(s) 1069
Kzo9I GATC 4 cut(s) 423, 554, 655, 924
LguI GCTCTTC 1 cut(s) 471
LmnI GCTCC 3 cut(s) 144, 624, 1307
Lsp1109I GCAGC 4 cut(s) 413, 711, 880, 1369
LweI GCATC 3 cut(s) 341, 816, 1348
MaeI CTAG 1 cut(s) 1077
MaeIII GTNAC 5 cut(s) 282, 766, 899, 994, 1237
MalI GATC 4 cut(s) 425, 556, 657, 926
MboI GATC 4 cut(s) 423, 554, 655, 924
MflI RGATCY 1 cut(s) 423
MhlI GDGCHC 4 cut(s) 44, 466, 981, 1249
MluCI AATT 8 cut(s) 53, 84, 738, 856, 954, 1100, 1224, 1391
MmeI TCCRAC 1 cut(s) 602
MnlI CCTC 9 cut(s) 11, 167, 219, 283, 727, 1079, 1100, 1108, 1260
Mph1103I ATGCAT 1 cut(s) 1352
MroXI GAANNNNTTC 1 cut(s) 1054
MseI TTAA 4 cut(s) 144, 165, 741, 1218
MslI CAYNNNNRTG 4 cut(s) 255, 812, 1172, 1252
MspA1I CMGCKG 1 cut(s) 404
MspI CCGG 4 cut(s) 35, 44, 675, 1242
MspR9I CCNGG 2 cut(s) 44, 45
MwoI GCNNNNNNNGC 4 cut(s) 89, 858, 1268, 1307
NciI CCSGG 2 cut(s) 44, 45
NdeII GATC 4 cut(s) 423, 554, 655, 924
NlaIV GGNNCC 1 cut(s) 1067
NmuCI GTSAC 3 cut(s) 282, 766, 1237
NsiI ATGCAT 1 cut(s) 1352
NspI RCATGY 2 cut(s) 260, 1350
OliI CACNNNNGTG 1 cut(s) 1252
PaeI GCATGC 1 cut(s) 1350
PciSI GCTCTTC 1 cut(s) 471
PdmI GAANNNNTTC 1 cut(s) 1054
PfeI GAWTC 5 cut(s) 101, 122, 290, 614, 1164
PinAI ACCGGT 1 cut(s) 1241
PkrI GCNGC 4 cut(s) 403, 726, 895, 1384
PshAI GACNNNNGTC 1 cut(s) 703
PshBI ATTAAT 1 cut(s) 165
PspN4I GGNNCC 1 cut(s) 1067
PspPI GGNCC 3 cut(s) 672, 1109, 1181
PsuI RGATCY 1 cut(s) 423
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 3 cut(s) 386, 818, 1067
RsaNI GTAC 3 cut(s) 385, 817, 1066
RseI CAYNNNNRTG 4 cut(s) 255, 812, 1172, 1252
SalI GTCGAC 2 cut(s) 116, 712
SapI GCTCTTC 1 cut(s) 471
SaqAI TTAA 4 cut(s) 144, 165, 741, 1218
SatI GCNGC 4 cut(s) 402, 725, 894, 1383
Sau3AI GATC 4 cut(s) 423, 554, 655, 924
Sau96I GGNCC 3 cut(s) 672, 1109, 1181
ScrFI CCNGG 2 cut(s) 44, 45
SduI GDGCHC 4 cut(s) 44, 466, 981, 1249
SfaNI GCATC 3 cut(s) 341, 816, 1348
SinI GGWCC 2 cut(s) 672, 1181
SmaI CCCGGG 1 cut(s) 45
SmiMI CAYNNNNRTG 4 cut(s) 255, 812, 1172, 1252
SmlI CTYRAG 1 cut(s) 1153
SmoI CTYRAG 1 cut(s) 1153
SphI GCATGC 1 cut(s) 1350
Sse9I AATT 8 cut(s) 53, 84, 738, 856, 954, 1100, 1224, 1391
SsiI CCGC 2 cut(s) 864, 896
SspI AATATT 1 cut(s) 417
SspMI CTAG 1 cut(s) 1077
StyD4I CCNGG 2 cut(s) 42, 43
StyI CCWWGG 1 cut(s) 436
TaaI ACNGT 1 cut(s) 605
TaqI TCGA 6 cut(s) 117, 553, 658, 697, 713, 927
TasI AATT 8 cut(s) 53, 84, 738, 856, 954, 1100, 1224, 1391
TatI WGTACW 1 cut(s) 816
TfiI GAWTC 5 cut(s) 101, 122, 290, 614, 1164
Tru1I TTAA 4 cut(s) 144, 165, 741, 1218
Tru9I TTAA 4 cut(s) 144, 165, 741, 1218
TscAI CASTG 6 cut(s) 224, 915, 981, 1011, 1149, 1259
TseFI GTSAC 3 cut(s) 282, 766, 1237
TseI GCWGC 4 cut(s) 401, 724, 893, 1382
Tsp45I GTSAC 3 cut(s) 282, 766, 1237
TspDTI ATGAA 8 cut(s) 219, 362, 555, 606, 852, 1047, 1312, 1404
TspGWI ACGGA 1 cut(s) 697
TspMI CCCGGG 1 cut(s) 43
TspRI CASTG 6 cut(s) 224, 915, 981, 1011, 1149, 1259
VneI GTGCAC 1 cut(s) 1245
VpaK11BI GGWCC 2 cut(s) 672, 1181
VspI ATTAAT 1 cut(s) 165
XapI RAATTY 3 cut(s) 1100, 1224, 1391
XceI RCATGY 2 cut(s) 260, 1350
XcmI CCANNNNNNNNNTGG 2 cut(s) 434, 1081
XmaI CCCGGG 1 cut(s) 43
XmiI GTMKAC 3 cut(s) 117, 713, 886
XmnI GAANNNNTTC 1 cut(s) 1054
XspI CTAG 1 cut(s) 1077
Zsp2I ATGCAT 1 cut(s) 1352
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.