Rh6AG154500

O-acyltransferase (WSD1-like)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
24093167 .. 24095756
2590 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG154500.1

Sequence Viewer

Length: 1401 bp
ATGGAGTTGCAGTTTGAGGGAGAAGAAGGACTGCAGCCGGTGAGCCCTCTCGGTCAGTACTTCACTAGCTCTGTGTTATCTGTATCGAATCTTGGTGTTTTGGAAACTGAGGTTCCAATCGATGGGCTTCCAGCTATGTCGTTGCTTCAAAATGTGTTCCTCCCCATCAGCCCACGGTTCTCCTCGATCATGGTTGAGAGAAGGGGAAAGAAGCAGTGGAAAAGGGTTGAAGTAAAGCTTGAAGACCATGTTAACATCCCTATTTTCCCTTCTGGCCTGTCGCCTGCATCATACGATAAGTATCTTGATGACTACATATCAAAGTTAGCAATGGAAAGACTTCCGCAACACAAACCTCTCTGGGAAATTCACATTATCAAGTACCCAACTACCAATGCAGCCGGCACTGTAATATTCAAGCTTCACCAAGCGCTTGGTGATGGCTTCTCTCTCATGGGTGCTCTTCTCTCTTGTTTACAACGAGCTGACAACCCTTCTCTTCCCCTAACCTTCCCGTCAAGAAGGAGGTCGCAGCCATGGAAGAGTGAAAATTTTGTGACTAAAATTTTTTCTTCTGTTTTCAACACCATATCGGATTTTTTAAATAGCAACTTGGAGGAAGATGATCAAACACCAATCAGATCGGGGAATGATGGAATTGAGTTCAAGCCAATTGCAGTATCAACTATGACGATTTCCCTTGATAGAATCAAACTAATCAAGAGCAGGCTCGGAGTGACGATAAATGACGTTCTTACCGCGATGATCTTCCTTGGCACTCGACTATACATCCAAGAGACAAACAAAAGTTTAAGCAAAGCAAGAGGCACAGCAATTGTATTGCTCAACACAAGGATGATGGGGAATTACACTTCAGTTCAGGAGATGATCAAACCTAATAGCAAGTTGCCATGGGGGAACCATTTGTCACTGTTGCATGTACCAATACCCAAGTTGTTAACGAATAGTGAAGAACAATTTTCAGATAATGCACTTGACTTTGTCTGGAAGACACAGAAAATTTTAAGGAGCAAAAGACATTCTTTGGGTATTCATCTCACTGCTGGGTTCTTGGAGATTCTCAACAAATTTGGAGGCCATGAGGCAGCAGCAAGATACATACGTAACACATTGAAGAAGTCGAGCATGATAATTTCCAATATGATTGGACCGGTGGAACAGATGTCTTTGGCAAATCATCCAGTTAAAGGCTTATACTTTTTGGTCTTTGGTTCACCTGAGGGCCTTGATGTAACAATAGTAAGTTATATGGGAAAGGTGAGGATTGCCTTCAAGATGGAAAAGGGTCTTATTGATCCACCAAAGTTCAAGTCATGCATGGAAAAGTCTTTTGAGATGATACTCGAAGCCTCGGAGAAAACTGCTGTGCAGAAGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

466

Amino Acids

52.31

Weight (kDa)

9.25

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WS_DGAT_cat PF03007 72 - 174 3e-07 Wax ester synthase/diacylglycerol acyltransferase catalytic domain
WS_DGAT_C PF06974 305 - 454 4.7e-36 WS/DGAT C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 122
AccII CGCG 1 cut(s) 761
AciI CCGC 2 cut(s) 344, 759
AclWI GGATC 1 cut(s) 1310
AcsI RAATTY 5 cut(s) 366, 550, 564, 1020, 1088
AcuI CTGAAG 1 cut(s) 858
AfaI GTAC 3 cut(s) 59, 383, 942
AfeI AGCGCT 1 cut(s) 432
AfiI CCNNNNNNNGG 2 cut(s) 122, 1208
AgeI ACCGGT 1 cut(s) 1171
AgsI TTSAA 9 cut(s) 149, 230, 242, 418, 583, 667, 1135, 1294, 1330
AluBI AGCT 5 cut(s) 69, 134, 238, 421, 485
AluI AGCT 5 cut(s) 69, 134, 238, 421, 485
Alw21I GWGCWC 1 cut(s) 463
Alw26I GTCTC 1 cut(s) 791
AlwI GGATC 1 cut(s) 1310
Aor51HI AGCGCT 1 cut(s) 432
AoxI GGCC 3 cut(s) 274, 1096, 1243
ApeKI GCWGC 5 cut(s) 34, 398, 532, 1106, 1109
ApoI RAATTY 5 cut(s) 366, 550, 564, 1020, 1088
ArsI GACNNNNNNTTYG 2 cut(s) 1316, 1348
AsiGI ACCGGT 1 cut(s) 1171
Asp700I GAANNNNTTC 1 cut(s) 339
AspLEI GCGC 1 cut(s) 433
AspS9I GGNCC 2 cut(s) 1169, 1243
AsuHPI GGTGA 5 cut(s) 52, 416, 449, 1227, 1291
AvaII GGWCC 1 cut(s) 1169
AxyI CCTNAGG 1 cut(s) 1239
BaeI ACNNNNGTAYC 2 cut(s) 1108, 1141
BanII GRGCYC 1 cut(s) 47
BbsI GAAGAC 2 cut(s) 249, 1016
Bbv12I GWGCWC 1 cut(s) 463
BbvI GCAGC 5 cut(s) 46, 410, 544, 1118, 1121
BccI CCATC 6 cut(s) 116, 173, 434, 647, 853, 1291
BclI TGATCA 2 cut(s) 625, 888
BcoDI GTCTC 1 cut(s) 791
BfaI CTAG 1 cut(s) 66
BfmI CTRYAG 1 cut(s) 32
BfoI RGCGCY 1 cut(s) 434
BisI GCNGC 5 cut(s) 35, 399, 533, 1107, 1110
BlsI GCNGC 5 cut(s) 36, 400, 534, 1108, 1111
BmcAI AGTACT 1 cut(s) 59
Bme18I GGWCC 1 cut(s) 1169
BmgT120I GGNCC 2 cut(s) 1169, 1243
BmiI GGNNCC 2 cut(s) 114, 920
BmsI GCATC 1 cut(s) 296
BpiI GAAGAC 2 cut(s) 249, 1016
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 1124
BsaBI GATNNNNATC 1 cut(s) 300
BsaJI CCNNGG 5 cut(s) 173, 536, 772, 911, 1371
BsaWI WCCGGW 1 cut(s) 1171
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 2 cut(s) 122, 1208
Bse118I RCCGGY 3 cut(s) 37, 401, 1171
Bse1I ACTGG 1 cut(s) 1202
Bse21I CCTNAGG 1 cut(s) 1239
Bse3DI GCAATG 1 cut(s) 336
Bse8I GATNNNNATC 1 cut(s) 300
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 5 cut(s) 173, 536, 772, 911, 1371
BseGI GGATG 4 cut(s) 255, 789, 861, 1198
BseJI GATNNNNATC 1 cut(s) 300
BseLI CCNNNNNNNGG 2 cut(s) 122, 1208
BseMI GCAATG 1 cut(s) 336
BseMII CTCAG 2 cut(s) 99, 1230
BseNI ACTGG 1 cut(s) 1202
BseRI GAGGAG 1 cut(s) 172
BseXI GCAGC 5 cut(s) 46, 410, 544, 1118, 1121
BseYI CCCAGC 1 cut(s) 1064
Bsh1236I CGCG 1 cut(s) 761
BshFI GGCC 3 cut(s) 276, 1098, 1245
BshTI ACCGGT 1 cut(s) 1171
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 1 cut(s) 463
BsiSI CCGG 3 cut(s) 38, 402, 1172
BslI CCNNNNNNNGG 2 cut(s) 122, 1208
BsmAI GTCTC 1 cut(s) 791
BsnI GGCC 3 cut(s) 276, 1098, 1245
Bsp1286I GDGCHC 2 cut(s) 47, 463
Bsp143I GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
Bsp19I CCATGG 2 cut(s) 536, 911
BspACI CCGC 2 cut(s) 344, 759
BspANI GGCC 3 cut(s) 276, 1098, 1245
BspCNI CTCAG 2 cut(s) 100, 1231
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 1 cut(s) 761
BspLI GGNNCC 2 cut(s) 114, 920
BspMAI CTGCAG 1 cut(s) 36
BspPI GGATC 1 cut(s) 1310
BspQI GCTCTTC 1 cut(s) 468
BsrDI GCAATG 1 cut(s) 336
BsrFI RCCGGY 3 cut(s) 37, 401, 1171
BsrI ACTGG 1 cut(s) 1202
BssAI RCCGGY 3 cut(s) 37, 401, 1171
BssECI CCNNGG 5 cut(s) 173, 536, 772, 911, 1371
BssMI GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
BssT1I CCWWGG 3 cut(s) 536, 772, 911
Bst4CI ACNGT 3 cut(s) 177, 409, 933
Bst6I CTCTTC 3 cut(s) 468, 504, 536
BstBAI YACGTR 1 cut(s) 1124
BstC8I GCNNGC 3 cut(s) 285, 403, 728
BstDEI CTNAG 2 cut(s) 108, 1239
BstDSI CCRYGG 3 cut(s) 173, 536, 911
BstF5I GGATG 4 cut(s) 255, 789, 861, 1198
BstFNI CGCG 1 cut(s) 761
BstH2I RGCGCY 1 cut(s) 434
BstHHI GCGC 1 cut(s) 433
BstKTI GATC 6 cut(s) 189, 628, 644, 768, 891, 1318
BstMAI GTCTC 1 cut(s) 791
BstMBI GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
BstNSI RCATGY 1 cut(s) 941
BstSFI CTRYAG 1 cut(s) 32
BstSNI TACGTA 1 cut(s) 1124
BstUI CGCG 1 cut(s) 761
BstV1I GCAGC 5 cut(s) 46, 410, 544, 1118, 1121
BstV2I GAAGAC 2 cut(s) 249, 1016
BstXI CCANNNNNNTGG 1 cut(s) 434
Bsu15I ATCGAT 1 cut(s) 120
Bsu36I CCTNAGG 1 cut(s) 1239
BsuRI GGCC 3 cut(s) 276, 1098, 1245
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 3 cut(s) 173, 536, 911
BtgZI GCGATG 1 cut(s) 776
BtsCI GGATG 4 cut(s) 255, 789, 861, 1198
BtsI GCAGTG 2 cut(s) 221, 1059
BtsIMutI CAGTG 4 cut(s) 221, 405, 929, 1059
Cac8I GCNNGC 3 cut(s) 285, 403, 728
CfoI GCGC 1 cut(s) 433
Cfr10I RCCGGY 3 cut(s) 37, 401, 1171
Cfr13I GGNCC 2 cut(s) 1169, 1243
ClaI ATCGAT 1 cut(s) 120
Csp6I GTAC 3 cut(s) 58, 382, 941
CspAI ACCGGT 1 cut(s) 1171
CviQI GTAC 3 cut(s) 58, 382, 941
DdeI CTNAG 2 cut(s) 108, 1239
DpnI GATC 6 cut(s) 188, 627, 643, 767, 890, 1317
DpnII GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
DraI TTTAAA 1 cut(s) 603
Eam1104I CTCTTC 3 cut(s) 468, 504, 536
EarI CTCTTC 3 cut(s) 468, 504, 536
Eco105I TACGTA 1 cut(s) 1124
Eco130I CCWWGG 3 cut(s) 536, 772, 911
Eco24I GRGCYC 1 cut(s) 47
Eco47I GGWCC 1 cut(s) 1169
Eco47III AGCGCT 1 cut(s) 432
Eco57I CTGAAG 1 cut(s) 858
Eco81I CCTNAGG 1 cut(s) 1239
EcoO109I RGGNCCY 1 cut(s) 1243
EcoT14I CCWWGG 3 cut(s) 536, 772, 911
EcoT22I ATGCAT 1 cut(s) 1340
EcoT38I GRGCYC 1 cut(s) 47
ErhI CCWWGG 3 cut(s) 536, 772, 911
FalI AAGNNNNNCTT 4 cut(s) 222, 254, 1027, 1059
FbaI TGATCA 2 cut(s) 625, 888
Fnu4HI GCNGC 5 cut(s) 35, 399, 533, 1107, 1110
FokI GGATG 4 cut(s) 242, 776, 868, 1185
FriOI GRGCYC 1 cut(s) 47
Fsp4HI GCNGC 5 cut(s) 35, 399, 533, 1107, 1110
FspBI CTAG 1 cut(s) 66
GlaI GCGC 1 cut(s) 432
GluI GCNGC 5 cut(s) 35, 399, 533, 1107, 1110
GsaI CCCAGC 1 cut(s) 1068
HaeII RGCGCY 1 cut(s) 434
HaeIII GGCC 3 cut(s) 276, 1098, 1245
HapII CCGG 3 cut(s) 38, 402, 1172
HhaI GCGC 1 cut(s) 433
Hin6I GCGC 1 cut(s) 431
HinP1I GCGC 1 cut(s) 431
HincII GTYRAC 2 cut(s) 253, 960
HindII GTYRAC 2 cut(s) 253, 960
HindIII AAGCTT 2 cut(s) 236, 419
HinfI GANTC 3 cut(s) 88, 708, 1078
HpaI GTTAAC 2 cut(s) 253, 960
HpaII CCGG 3 cut(s) 38, 402, 1172
HphI GGTGA 5 cut(s) 52, 416, 449, 1227, 1291
Hpy166II GTNNAC 4 cut(s) 253, 476, 960, 1235
Hpy188I TCNGA 5 cut(s) 595, 641, 734, 985, 1375
Hpy188III TCNNGA 6 cut(s) 305, 519, 721, 881, 1006, 1294
Hpy8I GTNNAC 4 cut(s) 253, 476, 960, 1235
HpyAV CCTTC 7 cut(s) 20, 195, 279, 504, 516, 520, 1300
HpyCH4III ACNGT 3 cut(s) 177, 409, 933
HpyCH4IV ACGT 2 cut(s) 750, 1123
HpyCH4V TGCA 9 cut(s) 10, 34, 287, 398, 677, 937, 992, 1338, 1390
HpyF3I CTNAG 2 cut(s) 108, 1239
HpySE526I ACGT 2 cut(s) 750, 1123
HspAI GCGC 1 cut(s) 431
KroI GCCGGC 1 cut(s) 401
KroNI GCCGGC 1 cut(s) 403
Ksp22I TGATCA 2 cut(s) 625, 888
KspAI GTTAAC 2 cut(s) 253, 960
Kzo9I GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
LguI GCTCTTC 1 cut(s) 468
LmnI GCTCC 1 cut(s) 1029
Lsp1109I GCAGC 5 cut(s) 46, 410, 544, 1118, 1121
LweI GCATC 1 cut(s) 296
MaeI CTAG 1 cut(s) 66
MaeII ACGT 2 cut(s) 750, 1123
MaeIII GTNAC 5 cut(s) 556, 736, 927, 1124, 1252
MalI GATC 6 cut(s) 188, 627, 643, 767, 890, 1317
MboI GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
MfeI CAATTG 2 cut(s) 672, 834
MhlI GDGCHC 2 cut(s) 47, 463
Mph1103I ATGCAT 1 cut(s) 1340
MroNI GCCGGC 1 cut(s) 401
MroXI GAANNNNTTC 1 cut(s) 339
MseI TTAA 7 cut(s) 252, 602, 812, 959, 1025, 1206, 1399
MslI CAYNNNNRTG 1 cut(s) 854
MspI CCGG 3 cut(s) 38, 402, 1172
MunI CAATTG 2 cut(s) 672, 834
MvnI CGCG 1 cut(s) 761
NaeI GCCGGC 1 cut(s) 403
NcoI CCATGG 2 cut(s) 536, 911
NdeII GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
NgoMIV GCCGGC 1 cut(s) 401
NlaIV GGNNCC 2 cut(s) 114, 920
NmuCI GTSAC 3 cut(s) 556, 736, 927
NsiI ATGCAT 1 cut(s) 1340
NspI RCATGY 1 cut(s) 941
PciSI GCTCTTC 1 cut(s) 468
PdiI GCCGGC 1 cut(s) 403
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 3 cut(s) 88, 708, 1078
PflFI GACNNNGTC 1 cut(s) 1001
PflMI CCANNNNNTGG 1 cut(s) 122
PinAI ACCGGT 1 cut(s) 1171
PkrI GCNGC 5 cut(s) 36, 400, 534, 1108, 1111
Ppu21I YACGTR 1 cut(s) 1124
PspFI CCCAGC 1 cut(s) 1064
PspN4I GGNNCC 2 cut(s) 114, 920
PspPI GGNCC 2 cut(s) 1169, 1243
PstI CTGCAG 1 cut(s) 36
PsyI GACNNNGTC 1 cut(s) 1001
RsaI GTAC 3 cut(s) 59, 383, 942
RsaNI GTAC 3 cut(s) 58, 382, 941
RseI CAYNNNNRTG 1 cut(s) 854
SapI GCTCTTC 1 cut(s) 468
SaqAI TTAA 7 cut(s) 252, 602, 812, 959, 1025, 1206, 1399
SatI GCNGC 5 cut(s) 35, 399, 533, 1107, 1110
Sau3AI GATC 6 cut(s) 186, 625, 641, 765, 888, 1315
Sau96I GGNCC 2 cut(s) 1169, 1243
ScaI AGTACT 1 cut(s) 59
SduI GDGCHC 2 cut(s) 47, 463
SfaNI GCATC 1 cut(s) 296
SfcI CTRYAG 1 cut(s) 32
SinI GGWCC 1 cut(s) 1169
SmiMI CAYNNNNRTG 1 cut(s) 854
SnaBI TACGTA 1 cut(s) 1124
SsiI CCGC 2 cut(s) 344, 759
SspI AATATT 1 cut(s) 414
SspMI CTAG 1 cut(s) 66
StyI CCWWGG 3 cut(s) 536, 772, 911
TaaI ACNGT 3 cut(s) 177, 409, 933
TaiI ACGT 2 cut(s) 753, 1126
TaqI TCGA 6 cut(s) 86, 120, 185, 781, 1142, 1365
TaqII GACCGA 1 cut(s) 41
TatI WGTACW 1 cut(s) 57
TfiI GAWTC 3 cut(s) 88, 708, 1078
Tru1I TTAA 7 cut(s) 252, 602, 812, 959, 1025, 1206, 1399
Tru9I TTAA 7 cut(s) 252, 602, 812, 959, 1025, 1206, 1399
TscAI CASTG 4 cut(s) 221, 412, 936, 1066
TseFI GTSAC 3 cut(s) 556, 736, 927
TseI GCWGC 5 cut(s) 34, 398, 532, 1106, 1109
Tsp45I GTSAC 3 cut(s) 556, 736, 927
TspDTI ATGAA 1 cut(s) 1043
TspRI CASTG 4 cut(s) 221, 412, 936, 1066
Tth111I GACNNNGTC 1 cut(s) 1001
Van91I CCANNNNNTGG 1 cut(s) 122
VpaK11BI GGWCC 1 cut(s) 1169
XapI RAATTY 5 cut(s) 366, 550, 564, 1020, 1088
XceI RCATGY 1 cut(s) 941
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 1 cut(s) 66
ZrmI AGTACT 1 cut(s) 59
Zsp2I ATGCAT 1 cut(s) 1340
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.