Prupe.7G117400_v2.0.a1

O-acyltransferase (WSD1-like)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000634
Physical Location & Seq
Reverse (-)
14210972 .. 14221767
10796 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G117400.1

Sequence Viewer

Length: 1014 bp
ATGGAGTTGGAGGAATTGGAAGAACAAGAGCCAGTGAGTCCAAATGGCCAGTACTTCAGTAGCAATGTGATATCTCTATCGGTGCTTGCTGTTTGGGAATTTGAGATTCCATTCGATCCTGAGTCTCAAACAATATCGTTGCTTATTAAGAACGTCTTCCTCCCCATCAGCCCTCGTTTCTCCTCTATCATGGTTGAAAATAATGGAAAGAAACAGTGGAAAAGGGTGGAAGTGAAGCTTGAAGACCACGTTTACACCCCTCCTTTCCCTTCCGGCCTGTCGCTTGAATCATACGACAAGTATTTTGACGACTATATTTCAAAGCTATTAACAGAAAGATTTCCACAAGGCAAACCACTATGGGAAATTCATATTATCAACTACCCAACTAGCAATGCAGCTGCTAATGTAATCTTCAAGTTACACCACGCGCTTGGAGATGGTTACTCTCTCATGGGTGCCCTGATTTCTTCTATGCAAAGGGCTGACAACCCTTCTCTTCCCTTAACTCTTCCTTCACGGAAGCGATCCGAATCAAAGAGAGAAAATTTTGTGACTAAAACTTTCTCAGGTTTTTGCAACACCATTTCAGACTTGTGGTTGGGCACTTTAAAGACCATGAACGGAGATGTTGTAACACCAATCAGGTCTGGTAATGATGCGATTGAATTTCGGCCAGCAACTGTATCAACTATGACATTTTCTCTTGATCAAATCAAATCAATCAAGGACAAGCTTGGAGTGACTGTAAATGATGTTCTGACCGGGATGATCTTCTTCGGAACTCGACTGTACGTGCAAGAGATGAACCAAAGTTCAAGCAAAGCAGATTGTACAGCAATGGTGTTGCTCAACACAAGGATCATGGGGGATTATGTGCCAATTGAGGAGATGATCAAACCCAACAGCAAGGCGCCATGGGGAAATCGTTTTACATTCATGCATGTACCCATACCCAAGTTAACTGAACTCTCAAATGCGTTGGACTTTATCTGGAACGCGCACACAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1298 WES_acyltransf

Protein Analysis

338

Amino Acids

38.13

Weight (kDa)

5.76

Isoelectric Point (pI)

44.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000634)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g10290 FvH4_3g28230 FvH4_3g28240
malus_domestica MD05G1036400.v1.1 MD10G1159400.v1.1 MD17G1237100.v1.1 MD17G1237200.v1.1 MD17G1237300.v1.1 MD17G1237600.v1.1 MD17G1238200.v1.1
prunus_persica Prupe.3G140400_v2.0.a1 Prupe.3G140700_v2.0.a1 Prupe.3G141100_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G257800_v2.0.a1 Prupe.4G258100_v2.0.a1 Prupe.7G117300_v2.0.a1 Prupe.7G117400_v2.0.a1 Prupe.7G117600_v2.0.a1 Prupe.8G044700_v2.0.a1
pyrus_communis pycom05g02680 pycom17g24220 pycom17g24240
rosa_chinensis RchiOBHm_Chr1g0350141 RchiOBHm_Chr5g0050931 RchiOBHm_Chr5g0051001 RchiOBHm_Chr5g0051021 RchiOBHm_Chr6g0267491
rosa_laevigata RLG00000013999 RLG00000028502 RLG00000034744 RLG00000034748 RLG00000034753
rosa_multiflora Rmu_sc0000446.1_g000056 Rmu_sc0000782.1_g000006 Rmu_sc0002951.1_g000001 Rmu_sc0003674.1_g000026 Rmu_sc0003756.1_g000004 Rmu_sc0011917.1_g000004 Rmu_sc0012005.1_g000019 Rmu_sc0040739.1_g000001
rosa_roxburghii Rroxscaffold_1G00029730 Rroxscaffold_1G00029740 Rroxscaffold_4G00305060 Rroxscaffold_7G00200710
rosa_rugosa Rorug01G0208400 Rorug05G0265200.1 Rorug05G0265300.1 Rorug05G0265400.1 Rorug05G0265500.1 Rorug05G0294000 Rorug06G0033100 Rorug06G0243300
rosa_samantha Rh1BG192100 Rh1BG192200 Rh1DG220600 Rh5AG270300 Rh5AG337200 Rh5AG337700 Rh5BG346700 Rh5BG347400 Rh5CG374300 Rh5DG359700 Rh5DG360500 Rh6AG154500 Rh6BG155100 Rh6BG362300 Rh6CG150300 Rh6DG140300 Rh6DG356300
rosa_wichuraiana Rw0G018820 Rw1G019350 Rw5G025300 Rw5G031770 Rw5G031820 Rw5G031870 Rw5G031910 Rw6G013250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 458, 913
AccII CGCG 2 cut(s) 431, 1001
AclWI GGATC 3 cut(s) 110, 522, 869
AcoI YGGCCR 2 cut(s) 46, 674
AcsI RAATTY 4 cut(s) 98, 366, 547, 668
AcuI CTGAAG 1 cut(s) 40
AcyI GRCGYC 1 cut(s) 914
AfaI GTAC 4 cut(s) 53, 794, 835, 948
AgsI TTSAA 7 cut(s) 197, 242, 287, 321, 418, 668, 819
AluBI AGCT 4 cut(s) 238, 325, 401, 736
AluI AGCT 4 cut(s) 238, 325, 401, 736
Alw26I GTCTC 1 cut(s) 129
AlwI GGATC 3 cut(s) 110, 522, 869
AlwNI CAGNNNCTG 1 cut(s) 683
AoxI GGCC 3 cut(s) 46, 274, 674
ApeKI GCWGC 2 cut(s) 398, 401
ApoI RAATTY 4 cut(s) 98, 366, 547, 668
ArsI GACNNNNNNTTYG 2 cut(s) 287, 319
Asp700I GAANNNNTTC 2 cut(s) 155, 339
AspLEI GCGC 3 cut(s) 433, 916, 1003
AsuC2I CCSGG 1 cut(s) 766
BaeGI GKGCMC 2 cut(s) 463, 608
BalI TGGCCA 1 cut(s) 48
BanI GGYRCC 2 cut(s) 458, 913
BbsI GAAGAC 2 cut(s) 148, 249
BbvI GCAGC 2 cut(s) 388, 410
BccI CCATC 2 cut(s) 173, 434
BclI TGATCA 2 cut(s) 709, 894
BcnI CCSGG 1 cut(s) 766
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 1 cut(s) 390
BfoI RGCGCY 1 cut(s) 917
BisI GCNGC 2 cut(s) 399, 402
BlsI GCNGC 2 cut(s) 400, 403
BmcAI AGTACT 1 cut(s) 53
Bme1390I CCNGG 1 cut(s) 766
BmiI GGNNCC 2 cut(s) 460, 915
BmrFI CCNGG 1 cut(s) 766
BmsI GCATC 1 cut(s) 649
BpiI GAAGAC 2 cut(s) 148, 249
BpuMI CCSGG 1 cut(s) 766
BsaAI YACGTR 1 cut(s) 796
BsaBI GATNNNNATC 1 cut(s) 532
BsaHI GRCGYC 1 cut(s) 914
BsaJI CCNNGG 1 cut(s) 917
BsaXI ACNNNNNCTCC 4 cut(s) 618, 648, 732, 762
Bse1I ACTGG 2 cut(s) 32, 49
Bse3DI GCAATG 3 cut(s) 70, 400, 846
Bse8I GATNNNNATC 1 cut(s) 532
BseDI CCNNGG 1 cut(s) 917
BseGI GGATG 1 cut(s) 774
BseJI GATNNNNATC 1 cut(s) 532
BseMI GCAATG 3 cut(s) 70, 400, 846
BseMII CTCAG 2 cut(s) 111, 582
BseNI ACTGG 2 cut(s) 32, 49
BseRI GAGGAG 2 cut(s) 172, 902
BseSI GKGCMC 2 cut(s) 463, 608
BseXI GCAGC 2 cut(s) 388, 410
Bsh1236I CGCG 2 cut(s) 431, 1001
BshFI GGCC 3 cut(s) 48, 276, 676
BshNI GGYRCC 2 cut(s) 458, 913
BsiSI CCGG 2 cut(s) 273, 765
BsmAI GTCTC 1 cut(s) 129
BsnI GGCC 3 cut(s) 48, 276, 676
Bsp1286I GDGCHC 2 cut(s) 463, 608
Bsp1407I TGTACA 1 cut(s) 833
Bsp143I GATC 6 cut(s) 115, 527, 709, 771, 861, 894
Bsp19I CCATGG 1 cut(s) 917
BspANI GGCC 3 cut(s) 48, 276, 676
BspCNI CTCAG 2 cut(s) 112, 581
BspFNI CGCG 2 cut(s) 431, 1001
BspLI GGNNCC 2 cut(s) 460, 915
BspPI GGATC 3 cut(s) 110, 522, 869
BspT107I GGYRCC 2 cut(s) 458, 913
BsrDI GCAATG 3 cut(s) 70, 400, 846
BsrGI TGTACA 1 cut(s) 833
BsrI ACTGG 2 cut(s) 32, 49
BssECI CCNNGG 1 cut(s) 917
BssMI GATC 6 cut(s) 115, 527, 709, 771, 861, 894
BssNI GRCGYC 1 cut(s) 914
BssT1I CCWWGG 1 cut(s) 917
Bst4CI ACNGT 4 cut(s) 216, 685, 748, 792
Bst6I CTCTTC 2 cut(s) 504, 516
BstACI GRCGYC 1 cut(s) 914
BstAUI TGTACA 1 cut(s) 833
BstBAI YACGTR 1 cut(s) 796
BstC8I GCNNGC 2 cut(s) 87, 678
BstDEI CTNAG 2 cut(s) 120, 568
BstDSI CCRYGG 1 cut(s) 917
BstF5I GGATG 1 cut(s) 774
BstFNI CGCG 2 cut(s) 431, 1001
BstH2I RGCGCY 1 cut(s) 917
BstHHI GCGC 3 cut(s) 433, 916, 1003
BstKTI GATC 6 cut(s) 118, 530, 712, 774, 864, 897
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 6 cut(s) 115, 527, 709, 771, 861, 894
BstNSI RCATGY 1 cut(s) 947
BstSCI CCNGG 1 cut(s) 764
BstSLI GKGCMC 2 cut(s) 463, 608
BstUI CGCG 2 cut(s) 431, 1001
BstV1I GCAGC 2 cut(s) 388, 410
BstV2I GAAGAC 2 cut(s) 148, 249
BstXI CCANNNNNNTGG 1 cut(s) 434
BsuRI GGCC 3 cut(s) 48, 276, 676
BtgI CCRYGG 1 cut(s) 917
BtsCI GGATG 1 cut(s) 774
BtsIMutI CAGTG 2 cut(s) 39, 221
Cac8I GCNNGC 2 cut(s) 87, 678
CaiI CAGNNNCTG 1 cut(s) 683
CfoI GCGC 3 cut(s) 433, 916, 1003
Csp6I GTAC 4 cut(s) 52, 793, 834, 947
CviAII CATG 7 cut(s) 190, 454, 619, 865, 918, 940, 944
CviQI GTAC 4 cut(s) 52, 793, 834, 947
DdeI CTNAG 2 cut(s) 120, 568
DinI GGCGCC 1 cut(s) 915
DpnI GATC 6 cut(s) 117, 529, 711, 773, 863, 896
DpnII GATC 6 cut(s) 115, 527, 709, 771, 861, 894
DraI TTTAAA 1 cut(s) 612
EaeI YGGCCR 2 cut(s) 46, 674
Eam1104I CTCTTC 2 cut(s) 504, 516
EarI CTCTTC 2 cut(s) 504, 516
Eco130I CCWWGG 1 cut(s) 917
Eco32I GATATC 1 cut(s) 72
Eco57I CTGAAG 1 cut(s) 40
EcoRV GATATC 1 cut(s) 72
EcoT14I CCWWGG 1 cut(s) 917
EcoT22I ATGCAT 1 cut(s) 945
EgeI GGCGCC 1 cut(s) 915
EheI GGCGCC 1 cut(s) 915
ErhI CCWWGG 1 cut(s) 917
FaeI CATG 7 cut(s) 193, 457, 622, 868, 921, 943, 947
FalI AAGNNNNNCTT 4 cut(s) 140, 172, 222, 254
FatI CATG 7 cut(s) 189, 453, 618, 864, 917, 939, 943
FbaI TGATCA 2 cut(s) 709, 894
Fnu4HI GCNGC 2 cut(s) 399, 402
FokI GGATG 1 cut(s) 781
Fsp4HI GCNGC 2 cut(s) 399, 402
FspBI CTAG 1 cut(s) 390
GlaI GCGC 3 cut(s) 432, 915, 1002
GluI GCNGC 2 cut(s) 399, 402
HaeII RGCGCY 1 cut(s) 917
HaeIII GGCC 3 cut(s) 48, 276, 676
HapII CCGG 2 cut(s) 273, 765
HhaI GCGC 3 cut(s) 433, 916, 1003
Hin1I GRCGYC 1 cut(s) 914
Hin1II CATG 7 cut(s) 193, 457, 622, 868, 921, 943, 947
Hin6I GCGC 3 cut(s) 431, 914, 1001
HinP1I GCGC 3 cut(s) 431, 914, 1001
HincII GTYRAC 1 cut(s) 963
HindII GTYRAC 1 cut(s) 963
HindIII AAGCTT 2 cut(s) 236, 734
HinfI GANTC 5 cut(s) 37, 106, 122, 287, 533
HpaI GTTAAC 1 cut(s) 963
HpaII CCGG 2 cut(s) 273, 765
Hpy166II GTNNAC 2 cut(s) 253, 963
Hpy188I TCNGA 4 cut(s) 532, 592, 762, 782
Hpy188III TCNNGA 3 cut(s) 119, 707, 994
Hpy8I GTNNAC 2 cut(s) 253, 963
HpyAV CCTTC 3 cut(s) 279, 504, 525
HpyCH4III ACNGT 4 cut(s) 216, 685, 748, 792
HpyCH4IV ACGT 3 cut(s) 153, 249, 795
HpyCH4V TGCA 5 cut(s) 398, 478, 579, 799, 943
HpyF3I CTNAG 2 cut(s) 120, 568
HpySE526I ACGT 3 cut(s) 153, 249, 795
Hsp92I GRCGYC 1 cut(s) 914
Hsp92II CATG 7 cut(s) 193, 457, 622, 868, 921, 943, 947
HspAI GCGC 3 cut(s) 431, 914, 1001
KasI GGCGCC 1 cut(s) 913
Ksp22I TGATCA 2 cut(s) 709, 894
KspAI GTTAAC 1 cut(s) 963
Kzo9I GATC 6 cut(s) 115, 527, 709, 771, 861, 894
Lsp1109I GCAGC 2 cut(s) 388, 410
LweI GCATC 1 cut(s) 649
MaeI CTAG 1 cut(s) 390
MaeII ACGT 3 cut(s) 153, 249, 795
MaeIII GTNAC 5 cut(s) 420, 443, 553, 634, 742
MalI GATC 6 cut(s) 117, 529, 711, 773, 863, 896
MboI GATC 6 cut(s) 115, 527, 709, 771, 861, 894
MboII GAAGA 9 cut(s) 32, 148, 254, 406, 462, 491, 503, 766, 769
MfeI CAATTG 1 cut(s) 882
MhlI GDGCHC 2 cut(s) 463, 608
MlsI TGGCCA 1 cut(s) 48
MluCI AATT 6 cut(s) 14, 98, 366, 547, 668, 882
MluNI TGGCCA 1 cut(s) 48
Mly113I GGCGCC 1 cut(s) 914
MlyI GAGTC 2 cut(s) 46, 131
MmeI TCCRAC 1 cut(s) 963
MnlI CCTC 6 cut(s) 4, 170, 183, 193, 270, 880
Mox20I TGGCCA 1 cut(s) 48
Mph1103I ATGCAT 1 cut(s) 945
MroXI GAANNNNTTC 2 cut(s) 155, 339
MscI TGGCCA 1 cut(s) 48
MseI TTAA 5 cut(s) 147, 329, 506, 611, 962
Msp20I TGGCCA 1 cut(s) 48
MspA1I CMGCKG 1 cut(s) 401
MspI CCGG 2 cut(s) 273, 765
MspR9I CCNGG 1 cut(s) 766
MunI CAATTG 1 cut(s) 882
MvnI CGCG 2 cut(s) 431, 1001
NarI GGCGCC 1 cut(s) 914
NciI CCSGG 1 cut(s) 766
NcoI CCATGG 1 cut(s) 917
NdeII GATC 6 cut(s) 115, 527, 709, 771, 861, 894
NlaIII CATG 7 cut(s) 193, 457, 622, 868, 921, 943, 947
NlaIV GGNNCC 2 cut(s) 460, 915
NmuCI GTSAC 2 cut(s) 553, 742
NsiI ATGCAT 1 cut(s) 945
NspI RCATGY 1 cut(s) 947
PdmI GAANNNNTTC 2 cut(s) 155, 339
PfeI GAWTC 3 cut(s) 106, 287, 533
PkrI GCNGC 2 cut(s) 400, 403
PleI GAGTC 2 cut(s) 45, 130
PluTI GGCGCC 1 cut(s) 917
PpsI GAGTC 2 cut(s) 45, 130
Ppu21I YACGTR 1 cut(s) 796
PspN4I GGNNCC 2 cut(s) 460, 915
PsrI GAACNNNNNNTAC 2 cut(s) 741, 773
PstNI CAGNNNCTG 1 cut(s) 683
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 4 cut(s) 53, 794, 835, 948
RsaNI GTAC 4 cut(s) 52, 793, 834, 947
SaqAI TTAA 5 cut(s) 147, 329, 506, 611, 962
SatI GCNGC 2 cut(s) 399, 402
Sau3AI GATC 6 cut(s) 115, 527, 709, 771, 861, 894
ScaI AGTACT 1 cut(s) 53
SchI GAGTC 2 cut(s) 46, 131
ScrFI CCNGG 1 cut(s) 766
SduI GDGCHC 2 cut(s) 463, 608
SetI ASST 9 cut(s) 156, 240, 252, 327, 403, 574, 650, 738, 798
SfaNI GCATC 1 cut(s) 649
SfoI GGCGCC 1 cut(s) 915
Sse9I AATT 6 cut(s) 14, 98, 366, 547, 668, 882
SspDI GGCGCC 1 cut(s) 913
SspMI CTAG 1 cut(s) 390
StyD4I CCNGG 1 cut(s) 764
StyI CCWWGG 1 cut(s) 917
TaaI ACNGT 4 cut(s) 216, 685, 748, 792
TaiI ACGT 3 cut(s) 156, 252, 798
TaqI TCGA 2 cut(s) 114, 787
TasI AATT 6 cut(s) 14, 98, 366, 547, 668, 882
TatI WGTACW 2 cut(s) 51, 833
TfiI GAWTC 3 cut(s) 106, 287, 533
Tru1I TTAA 5 cut(s) 147, 329, 506, 611, 962
Tru9I TTAA 5 cut(s) 147, 329, 506, 611, 962
TscAI CASTG 2 cut(s) 39, 221
TseFI GTSAC 2 cut(s) 553, 742
TseI GCWGC 2 cut(s) 398, 401
Tsp45I GTSAC 2 cut(s) 553, 742
TspDTI ATGAA 4 cut(s) 359, 635, 821, 928
TspGWI ACGGA 2 cut(s) 535, 639
TspRI CASTG 2 cut(s) 39, 221
XapI RAATTY 4 cut(s) 98, 366, 547, 668
XceI RCATGY 1 cut(s) 947
XmnI GAANNNNTTC 2 cut(s) 155, 339
XspI CTAG 1 cut(s) 390
ZrmI AGTACT 1 cut(s) 53
Zsp2I ATGCAT 1 cut(s) 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.