Prupe.5G025000_v2.0.a1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
2799723 .. 2803044
3322 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G025000.1

Sequence Viewer

Length: 2835 bp
ATGGCAGAAAGTGTGGTGAGCTTTTTGCTTGACAGGCTCACCACCATAATAGAAGATGAGGTGAGACTACTGTCAGGGACCCGAGCAGAGATGAAGGATATCGTCGAGGAGTTAGAGCGCATCAAGGCCTTCTTAAGGGTTGCTGATGCTAAGGAAGACAGTGACCCCCAGCTCAAAGTGTGGGTTAAACAAGTTAGAGATGTGGCTTATCAGATTGAAGATGCGCTTGATATATTCAGGCTTTCTCATTCATGTTATCATAGGCCTGGATGCCATGTTTCCCTTCATGAGCTTTCTTGCATCATTAACAAGTTGAAAGCTCGCCGGAGAATTGCTACTGATATTCAAGGCATAAAATCAAAAGTCAGAACCCTCTCCGAGGGACATCAGAATTACAAACTTGATGTTGACCCTGGCTCAAGCAAGGTTCATAAACATCAGTACAGTCAAGGGGATGCTCTTTTGCTGGAAGAGGCTGATCTTGTGGCAATCGGTGAACCTAAAAGGCAGCTGATTGAGTTGCTTATGCAGGAGGGTGGCGACGTTGGACGCCAGGCAGTCGCGGTCGTTGGGATGGCAGGGCTGGGGAAAACCACCTTGGCCAAGCAAGTCTATAAGGATGAAAGAGTGAAGAAAAATTTCAAGGTACATGCTTGGATCACTGTCTCTCAATCATTCAAGATAAAGAAGCTCCTAAGACACATAGTTGAAAAAATCTTCAAAGTTATCAGGAAACCGGTCCCTGAAGAATTTGATAGCATGGACACCAACAAGCTAAGAGAAAGAATAAAAAAATTGTTGCAGCACAGTAGGTACCTGATTGTTCTAGATGATCTTTGGCACATAGATGACTGGGATGTCATCAATCATGCATTGCCTAACAACAATGGTAGTCGAGTAATGATCACTACTCGTAATGCTTCTGTAGCCTCTGCCTCTTGCATGAACAACCACGGTATGGTCTACCATTTAGAGCCCTTATCTCCAGAAGAGTCTTGGACTCTTCTCTGTAGGAAGACATTTCAGGAAGAGTCATGTCCTCCCAATTTGGAGGAAATCTGTCGATGCATCTTAAGCAAATGTGGGGGACTGCCCCTTGCAATTGTGGCAATCGGTGCTGTTCTAGCTATGAAAGACAAGAAAAACATAGAAGATTGGGCTGCCGTTTGTGGCAGTATTGGTGCTGAAATTGAGGAAAATGACCAACTTGACAACATGAAAAGGTTGTTGTATCTCAGTTTCAGTGATTTACCATACCATCTAAAATCTTGTTTCTTGTATCTGAGTATCTTTCCTGATCTTTATAAATTCGAGTATATGAGATTAATTCGATTATGGATTGCTGAAGGATTTGTTATTGAAAAGGAAGGAAAGACACCAGAAGAAGTTGCTGAGAGTTACCTTAAGGAGCTACTGGACAGAAGTTTGATCGAAGCAGAAGAAATAGCTACCGATGGGAGGGTCAAATCATGTCGGATCCATGATCTTTTACGGGAGATTGTCGTTTTGAAGTCTAGAGAGCAAAACTTTGCAGCAATAGAGAAAGAGCAAGGCACAATGTGGCCTGAAAAAGTTCGACGACTATCAATTTTTAACACGTTTCAGAATGTACAACAAAAGAGGATTCCTTCCAAACTTCGTTCGTTGCTCATTTTTGGGGTAGAAGATTCACTTACTGAGTTTTCAATACCAAAATTGTTTCCTAGAGGTCTTCCGCTGCTTACTGTATTAGACTTGGAAGGTGCACCTCTAGAGACATTTCCAAAAGAGGTTGTCAACCTTCTTCTGCTGAGATATCTTAGTTTGAGGGGTACCAAGGTGAAACAAATTCCAAGCTCCATCAAGAAGCTTCAAAACCTAGAGACCTTTGATCTTAAACACTCTCATGTCGTTGAGTTGCCTGCTGAAATTTTGAATCTCAAGCGACTGCGCCATCTCCTGGTATATCGCTATGAAGTTGAATCTTATGCACGATTTAATTCCAGATATGGAGTGAAGGTTCCTGCAGGAATATGTGGCTTACAATCGCTCCAAAAGCTGTGTTTTGTAGAGGCAAATCAAGACAATGGCGCTTTAGTGGCAGAGCTTGGGAGAATGAATCAACTGAGGAAGTTAGGCATTTTCAAGTTGAGACAAGAAGATGGGGTCACCTTATGCTCATCTATCGAAAAGATGCGCAACCTTCGGTCATTGTCTGTATCTTCAGTGGAGAAGGACAAGATAATTGATCTGACACACATTTCTTGTCCTCCTCAATTTCTTCAGCGACTATACTTGACGGGGCGTTTAGAAAACTTACCGCATTGGATTTCTTCTCTCCAGAACGTGGTGAGACTGTTTCTGAAATGGAGTCGGCTAAAGGAGGATCCTCTAGTGCATCTTCAAGGTTTGCCAAATCTTGTACATCTTGAACTCCTTCAGGTTTATGAGGGAGACTGTTTGCATTTTAAGGCAGGAGGGTTTCCAAGCCTGAAGTTACTCGGTATTGACAAACTAGATGAACTGAAATTGGTAATCATGGATAAGGGAGCAATGCCTTGCCTAGAAAAGTTAATTATCCAGCGGTGCAGATTGTTGAAGAAGGTATCAGGCATTGAACATTTACAAGACCTAAAGCTGCTCGAATTTTTTGACATGCCAAACGAATTAATAAGGCCATTTCATCCAGATGGCGGGGAAGATCATTGGAAAGTTGCTCACATTCCAGAGGTTTACTCTTCGTATTGGAACGTTGGGGGTTGGGATGTTTATTCATTAGAGATCACTGATGGGGAGAGTACTAGTCATCAAGGTGCCATGAGGAGGCTGGAACCTAATATTCTATGGAAGGCTTAG

Protein Analysis

945

Amino Acids

108.18

Weight (kDa)

8.1

Isoelectric Point (pI)

48.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1305
AasI GACNNNNNNGTC 1 cut(s) 857
Acc16I TGCGCA 1 cut(s) 2177
Acc65I GGTACC 2 cut(s) 813, 1811
AccB1I GGYRCC 3 cut(s) 813, 1811, 2792
AccB7I CCANNNNNTGG 3 cut(s) 958, 1939, 2326
AccI GTMKAC 1 cut(s) 963
AccII CGCG 1 cut(s) 563
AciI CCGC 5 cut(s) 563, 1715, 2300, 2563, 2673
AclI AACGTT 1 cut(s) 2730
AclWI GGATC 5 cut(s) 665, 1471, 1484, 2360, 2373
AcoI YGGCCR 1 cut(s) 600
AcsI RAATTY 6 cut(s) 637, 749, 1307, 1827, 1908, 2624
AcuI CTGAAG 6 cut(s) 765, 1365, 2187, 2246, 2402, 2492
AcyI GRCGYC 1 cut(s) 550
AdeI CACNNNGTG 1 cut(s) 1560
AfaI GTAC 7 cut(s) 443, 648, 815, 1611, 1813, 2403, 2779
AfiI CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2802
AflII CTTAAG 3 cut(s) 133, 1072, 1403
AflIII ACRYGT 1 cut(s) 1596
AgeI ACCGGT 1 cut(s) 736
AhlI ACTAGT 1 cut(s) 2780
AjnI CCWGG 4 cut(s) 265, 412, 552, 1938
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AloI GAACNNNNNNTCC 2 cut(s) 1983, 2015
Alw21I GWGCWC 1 cut(s) 1747
Alw26I GTCTC 7 cut(s) 58, 670, 1748, 1856, 2125, 2326, 2427
Alw44I GTGCAC 1 cut(s) 1743
AlwI GGATC 5 cut(s) 665, 1471, 1484, 2360, 2373
Ama87I CYCGRG 1 cut(s) 81
AoxI GGCC 5 cut(s) 126, 263, 600, 1562, 2654
ApaLI GTGCAC 1 cut(s) 1743
ApeKI GCWGC 6 cut(s) 508, 802, 1160, 1532, 1717, 2617
ApoI RAATTY 6 cut(s) 637, 749, 1307, 1827, 1908, 2624
AseI ATTAAT 2 cut(s) 1325, 2648
AsiGI ACCGGT 1 cut(s) 736
Asp700I GAANNNNTTC 3 cut(s) 638, 1572, 2415
Asp718I GGTACC 2 cut(s) 813, 1811
AspLEI GCGC 5 cut(s) 120, 226, 1932, 2072, 2178
AspS9I GGNCC 2 cut(s) 78, 739
AsuHPI GGTGA 7 cut(s) 28, 31, 73, 506, 1831, 2140, 2341
AvaI CYCGRG 1 cut(s) 81
AvaII GGWCC 2 cut(s) 78, 739
BaeGI GKGCMC 1 cut(s) 1747
BaeI ACNNNNGTAYC 2 cut(s) 1803, 1836
BalI TGGCCA 1 cut(s) 602
BamHI GGATCC 2 cut(s) 1476, 2365
BanI GGYRCC 3 cut(s) 813, 1811, 2792
BanII GRGCYC 1 cut(s) 978
BbsI GAAGAC 3 cut(s) 162, 1022, 1703
Bbv12I GWGCWC 1 cut(s) 1747
BbvI GCAGC 6 cut(s) 520, 814, 1147, 1544, 1704, 2604
BccI CCATC 8 cut(s) 568, 1266, 1448, 1847, 1941, 2135, 2663, 2762
BceAI ACGGC 1 cut(s) 1148
BciT130I CCWGG 4 cut(s) 267, 414, 554, 1940
BclI TGATCA 1 cut(s) 903
BcoDI GTCTC 7 cut(s) 58, 670, 1748, 1856, 2125, 2326, 2427
BcuI ACTAGT 1 cut(s) 2780
BfmI CTRYAG 3 cut(s) 924, 1009, 2004
BfoI RGCGCY 1 cut(s) 2073
BfrI CTTAAG 3 cut(s) 133, 1072, 1403
BisI GCNGC 6 cut(s) 509, 803, 1161, 1533, 1718, 2618
BlsI GCNGC 6 cut(s) 510, 804, 1162, 1534, 1719, 2619
BmcAI AGTACT 1 cut(s) 2779
Bme1390I CCNGG 4 cut(s) 267, 414, 554, 1940
Bme18I GGWCC 2 cut(s) 78, 739
BmeT110I CYCGRG 1 cut(s) 81
BmgT120I GGNCC 2 cut(s) 78, 739
BmrFI CCNGG 4 cut(s) 267, 414, 554, 1940
BmrI ACTGGG 1 cut(s) 862
BmuI ACTGGG 1 cut(s) 862
BoxI GACNNNNGTC 1 cut(s) 70
BpiI GAAGAC 3 cut(s) 162, 1022, 1703
BplI GAGNNNNNCTC 2 cut(s) 2699, 2731
BpmI CTGGAG 2 cut(s) 969, 2303
Bpu10I CCTNAGC 1 cut(s) 150
BpuEI CTTGAG 2 cut(s) 403, 1904
BsaHI GRCGYC 1 cut(s) 550
BsaI GGTCTC 1 cut(s) 1856
BsaJI CCNNGG 5 cut(s) 378, 412, 597, 952, 1815
BsaWI WCCGGW 1 cut(s) 736
BsaXI ACNNNNNCTCC 4 cut(s) 1983, 2013, 2013, 2043
Bsc4I CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2802
Bse118I RCCGGY 1 cut(s) 736
Bse1I ACTGG 2 cut(s) 857, 1419
Bse3DI GCAATG 2 cut(s) 872, 2538
BseBI CCWGG 4 cut(s) 267, 414, 554, 1940
BseDI CCNNGG 5 cut(s) 378, 412, 597, 952, 1815
BseGI GGATG 7 cut(s) 275, 460, 579, 625, 862, 2662, 2749
BseLI CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2802
BseMI GCAATG 2 cut(s) 872, 2538
BseMII CTCAG 6 cut(s) 1249, 1274, 1383, 1668, 1781, 2096
BseNI ACTGG 2 cut(s) 857, 1419
BseRI GAGGAG 3 cut(s) 122, 2241, 2815
BseSI GKGCMC 1 cut(s) 1747
BseXI GCAGC 6 cut(s) 520, 814, 1147, 1544, 1704, 2604
BseYI CCCAGC 2 cut(s) 168, 583
BsgI GTGCAG 1 cut(s) 2587
Bsh1236I CGCG 1 cut(s) 563
Bsh1285I CGRYCG 1 cut(s) 567
BshFI GGCC 5 cut(s) 128, 265, 602, 1564, 2656
BshNI GGYRCC 3 cut(s) 813, 1811, 2792
BshTI ACCGGT 1 cut(s) 736
BsiEI CGRYCG 1 cut(s) 567
BsiHKAI GWGCWC 1 cut(s) 1747
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 2 cut(s) 325, 737
BslFI GGGAC 4 cut(s) 91, 396, 725, 1101
BslI CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2802
BsmAI GTCTC 7 cut(s) 58, 670, 1748, 1856, 2125, 2326, 2427
BsmFI GGGAC 4 cut(s) 91, 396, 725, 1101
BsnI GGCC 5 cut(s) 128, 265, 602, 1564, 2656
Bso31I GGTCTC 1 cut(s) 1856
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 978, 1747
Bsp1407I TGTACA 2 cut(s) 1609, 2401
BspACI CCGC 5 cut(s) 563, 1715, 2300, 2563, 2673
BspANI GGCC 5 cut(s) 128, 265, 602, 1564, 2656
BspCNI CTCAG 6 cut(s) 1248, 1275, 1384, 1669, 1782, 2097
BspFNI CGCG 1 cut(s) 563
BspHI TCATGA 1 cut(s) 286
BspMAI CTGCAG 1 cut(s) 2008
BspPI GGATC 5 cut(s) 665, 1471, 1484, 2360, 2373
BspT107I GGYRCC 3 cut(s) 813, 1811, 2792
BspTI CTTAAG 3 cut(s) 133, 1072, 1403
BspTNI GGTCTC 1 cut(s) 1856
BsrDI GCAATG 2 cut(s) 872, 2538
BsrFI RCCGGY 1 cut(s) 736
BsrGI TGTACA 2 cut(s) 1609, 2401
BsrI ACTGG 2 cut(s) 857, 1419
BssAI RCCGGY 1 cut(s) 736
BssECI CCNNGG 5 cut(s) 378, 412, 597, 952, 1815
BssNI GRCGYC 1 cut(s) 550
BssT1I CCWWGG 2 cut(s) 597, 1815
Bst2UI CCWGG 4 cut(s) 267, 414, 554, 1940
Bst4CI ACNGT 9 cut(s) 72, 161, 446, 664, 809, 956, 1726, 2337, 2438
Bst6I CTCTTC 5 cut(s) 465, 984, 1008, 1023, 2722
BstACI GRCGYC 1 cut(s) 550
BstAFI CTTAAG 3 cut(s) 133, 1072, 1403
BstAPI GCANNNNNTGC 1 cut(s) 1115
BstAUI TGTACA 2 cut(s) 1609, 2401
BstC8I GCNNGC 2 cut(s) 322, 1902
BstDSI CCRYGG 1 cut(s) 952
BstEII GGTNACC 1 cut(s) 2146
BstENI CCTNNNNNAGG 2 cut(s) 133, 377
BstF5I GGATG 7 cut(s) 275, 460, 579, 625, 862, 2662, 2749
BstFNI CGCG 1 cut(s) 563
BstH2I RGCGCY 1 cut(s) 2073
BstHHI GCGC 5 cut(s) 120, 226, 1932, 2072, 2178
BstMAI GTCTC 7 cut(s) 58, 670, 1748, 1856, 2125, 2326, 2427
BstMCI CGRYCG 1 cut(s) 567
BstMWI GCNNNNNNNGC 8 cut(s) 34, 926, 1074, 1106, 1115, 1124, 2035, 2078
BstNI CCWGG 4 cut(s) 267, 414, 554, 1940
BstNSI RCATGY 2 cut(s) 653, 2638
BstPAI GACNNNNGTC 1 cut(s) 70
BstPI GGTNACC 1 cut(s) 2146
BstSCI CCNGG 4 cut(s) 265, 412, 552, 1938
BstSFI CTRYAG 3 cut(s) 924, 1009, 2004
BstSLI GKGCMC 1 cut(s) 1747
BstUI CGCG 1 cut(s) 563
BstV1I GCAGC 6 cut(s) 520, 814, 1147, 1544, 1704, 2604
BstV2I GAAGAC 3 cut(s) 162, 1022, 1703
BstX2I RGATCY 2 cut(s) 1476, 2365
BstYI RGATCY 2 cut(s) 1476, 2365
BsuRI GGCC 5 cut(s) 128, 265, 602, 1564, 2656
BtgI CCRYGG 1 cut(s) 952
BtsCI GGATG 7 cut(s) 275, 460, 579, 625, 862, 2662, 2749
BtsIMutI CAGTG 5 cut(s) 166, 660, 1249, 2211, 2763
Cac8I GCNNGC 2 cut(s) 322, 1902
CciI TCATGA 1 cut(s) 286
CfoI GCGC 5 cut(s) 120, 226, 1932, 2072, 2178
Cfr10I RCCGGY 1 cut(s) 736
Cfr13I GGNCC 2 cut(s) 78, 739
CseI GACGC 1 cut(s) 558
Csp6I GTAC 7 cut(s) 442, 647, 814, 1610, 1812, 2402, 2778
CspAI ACCGGT 1 cut(s) 736
CviQI GTAC 7 cut(s) 442, 647, 814, 1610, 1812, 2402, 2778
DraIII CACNNNGTG 1 cut(s) 1560
DrdI GACNNNNNNGTC 1 cut(s) 857
DseDI GACNNNNNNGTC 1 cut(s) 857
EaeI YGGCCR 1 cut(s) 600
Eam1104I CTCTTC 5 cut(s) 465, 984, 1008, 1023, 2722
EarI CTCTTC 5 cut(s) 465, 984, 1008, 1023, 2722
Eco130I CCWWGG 2 cut(s) 597, 1815
Eco147I AGGCCT 2 cut(s) 128, 265
Eco24I GRGCYC 1 cut(s) 978
Eco31I GGTCTC 1 cut(s) 1856
Eco32I GATATC 2 cut(s) 100, 1796
Eco47I GGWCC 2 cut(s) 78, 739
Eco57I CTGAAG 6 cut(s) 765, 1365, 2187, 2246, 2402, 2492
Eco88I CYCGRG 1 cut(s) 81
Eco91I GGTNACC 1 cut(s) 2146
EcoNI CCTNNNNNAGG 2 cut(s) 133, 377
EcoO109I RGGNCCY 1 cut(s) 78
EcoO65I GGTNACC 1 cut(s) 2146
EcoRII CCWGG 4 cut(s) 265, 412, 552, 1938
EcoRV GATATC 2 cut(s) 100, 1796
EcoT14I CCWWGG 2 cut(s) 597, 1815
EcoT22I ATGCAT 2 cut(s) 874, 1070
EcoT38I GRGCYC 1 cut(s) 978
ErhI CCWWGG 2 cut(s) 597, 1815
FalI AAGNNNNNCTT 6 cut(s) 116, 148, 210, 242, 1656, 1688
FaqI GGGAC 4 cut(s) 91, 396, 725, 1101
FauI CCCGC 1 cut(s) 2666
FbaI TGATCA 1 cut(s) 903
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 6 cut(s) 509, 803, 1161, 1533, 1718, 2618
FokI GGATG 7 cut(s) 282, 467, 586, 632, 869, 2649, 2756
FriOI GRGCYC 1 cut(s) 978
Fsp4HI GCNGC 6 cut(s) 509, 803, 1161, 1533, 1718, 2618
FspI TGCGCA 1 cut(s) 2177
GlaI GCGC 5 cut(s) 119, 225, 1931, 2071, 2177
GluI GCNGC 6 cut(s) 509, 803, 1161, 1533, 1718, 2618
GsaI CCCAGC 2 cut(s) 172, 587
GsuI CTGGAG 2 cut(s) 969, 2303
HaeII RGCGCY 1 cut(s) 2073
HaeIII GGCC 5 cut(s) 128, 265, 602, 1564, 2656
HapII CCGG 2 cut(s) 325, 737
HgaI GACGC 1 cut(s) 558
HhaI GCGC 5 cut(s) 120, 226, 1932, 2072, 2178
Hin1I GRCGYC 1 cut(s) 550
Hin6I GCGC 5 cut(s) 118, 224, 1930, 2070, 2176
HinP1I GCGC 5 cut(s) 118, 224, 1930, 2070, 2176
HincII GTYRAC 2 cut(s) 409, 1777
HindII GTYRAC 2 cut(s) 409, 1777
HindIII AAGCTT 1 cut(s) 1847
HinfI GANTC 9 cut(s) 992, 1000, 1031, 1624, 1667, 1915, 1961, 2098, 2350
HpaII CCGG 2 cut(s) 325, 737
HphI GGTGA 7 cut(s) 28, 31, 73, 506, 1831, 2140, 2341
Hpy166II GTNNAC 6 cut(s) 409, 497, 964, 1745, 1777, 2713
Hpy188I TCNGA 9 cut(s) 213, 368, 379, 390, 1284, 1476, 1605, 2232, 2343
Hpy8I GTNNAC 6 cut(s) 409, 497, 964, 1745, 1777, 2713
Hpy99I CGWCG 3 cut(s) 107, 545, 1581
HpyCH4III ACNGT 9 cut(s) 72, 161, 446, 664, 809, 956, 1726, 2337, 2438
HpyCH4IV ACGT 4 cut(s) 543, 1598, 2325, 2730
HpyF10VI GCNNNNNNNGC 8 cut(s) 34, 926, 1074, 1106, 1115, 1124, 2035, 2078
HpySE526I ACGT 4 cut(s) 543, 1598, 2325, 2730
Hsp92I GRCGYC 1 cut(s) 550
HspAI GCGC 5 cut(s) 118, 224, 1930, 2070, 2176
KflI GGGWCCC 1 cut(s) 78
KpnI GGTACC 2 cut(s) 817, 1815
Ksp22I TGATCA 1 cut(s) 903
LmnI GCTCC 5 cut(s) 696, 1408, 1841, 2034, 2528
Lsp1109I GCAGC 6 cut(s) 520, 814, 1147, 1544, 1704, 2604
MaeII ACGT 4 cut(s) 543, 1598, 2325, 2730
MaeIII GTNAC 4 cut(s) 161, 1397, 2146, 2475
MfeI CAATTG 1 cut(s) 1101
MflI RGATCY 2 cut(s) 1476, 2365
MhlI GDGCHC 2 cut(s) 978, 1747
MlsI TGGCCA 1 cut(s) 602
MluNI TGGCCA 1 cut(s) 602
MlyI GAGTC 4 cut(s) 994, 1001, 1040, 2359
MmeI TCCRAC 2 cut(s) 526, 1454
Mox20I TGGCCA 1 cut(s) 602
Mph1103I ATGCAT 2 cut(s) 874, 1070
MroXI GAANNNNTTC 3 cut(s) 638, 1572, 2415
MscI TGGCCA 1 cut(s) 602
MslI CAYNNNNRTG 4 cut(s) 846, 1884, 2667, 2790
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 3 cut(s) 511, 1717, 2563
MspCI CTTAAG 3 cut(s) 133, 1072, 1403
MspI CCGG 2 cut(s) 325, 737
MspR9I CCNGG 4 cut(s) 267, 414, 554, 1940
MunI CAATTG 1 cut(s) 1101
MvaI CCWGG 4 cut(s) 267, 414, 554, 1940
MvnI CGCG 1 cut(s) 563
MwoI GCNNNNNNNGC 8 cut(s) 34, 926, 1074, 1106, 1115, 1124, 2035, 2078
NmuCI GTSAC 2 cut(s) 161, 2146
NsbI TGCGCA 1 cut(s) 2177
NsiI ATGCAT 2 cut(s) 874, 1070
NspI RCATGY 2 cut(s) 653, 2638
PagI TCATGA 1 cut(s) 286
PceI AGGCCT 2 cut(s) 128, 265
PdmI GAANNNNTTC 3 cut(s) 638, 1572, 2415
PfeI GAWTC 5 cut(s) 1624, 1667, 1915, 1961, 2098
PflMI CCANNNNNTGG 3 cut(s) 958, 1939, 2326
PinAI ACCGGT 1 cut(s) 736
PkrI GCNGC 6 cut(s) 510, 804, 1162, 1534, 1719, 2619
PleI GAGTC 4 cut(s) 994, 1000, 1039, 2358
PpsI GAGTC 4 cut(s) 994, 1000, 1039, 2358
PpuMI RGGWCCY 1 cut(s) 78
PshAI GACNNNNGTC 1 cut(s) 70
PshBI ATTAAT 2 cut(s) 1325, 2648
PsiI TTATAA 1 cut(s) 1305
Psp1406I AACGTT 1 cut(s) 2730
Psp5II RGGWCCY 1 cut(s) 78
Psp6I CCWGG 4 cut(s) 265, 412, 552, 1938
PspEI GGTNACC 1 cut(s) 2146
PspFI CCCAGC 2 cut(s) 168, 583
PspGI CCWGG 4 cut(s) 265, 412, 552, 1938
PspPI GGNCC 2 cut(s) 78, 739
PspPPI RGGWCCY 1 cut(s) 78
PstI CTGCAG 1 cut(s) 2008
PsuI RGATCY 2 cut(s) 1476, 2365
PvuII CAGCTG 1 cut(s) 511
RsaI GTAC 7 cut(s) 443, 648, 815, 1611, 1813, 2403, 2779
RsaNI GTAC 7 cut(s) 442, 647, 814, 1610, 1812, 2402, 2778
RseI CAYNNNNRTG 4 cut(s) 846, 1884, 2667, 2790
SatI GCNGC 6 cut(s) 509, 803, 1161, 1533, 1718, 2618
Sau96I GGNCC 2 cut(s) 78, 739
SbfI CCTGCAGG 1 cut(s) 2008
ScaI AGTACT 1 cut(s) 2779
SchI GAGTC 4 cut(s) 994, 1001, 1040, 2359
ScrFI CCNGG 4 cut(s) 267, 414, 554, 1940
SdaI CCTGCAGG 1 cut(s) 2008
SduI GDGCHC 2 cut(s) 978, 1747
SfcI CTRYAG 3 cut(s) 924, 1009, 2004
SinI GGWCC 2 cut(s) 78, 739
SmiMI CAYNNNNRTG 4 cut(s) 846, 1884, 2667, 2790
SmlI CTYRAG 5 cut(s) 133, 418, 1072, 1403, 1919
SmoI CTYRAG 5 cut(s) 133, 418, 1072, 1403, 1919
SpeI ACTAGT 1 cut(s) 2780
Sse8387I CCTGCAGG 1 cut(s) 2008
SseBI AGGCCT 2 cut(s) 128, 265
SsiI CCGC 5 cut(s) 563, 1715, 2300, 2563, 2673
SspI AATATT 1 cut(s) 2818
StuI AGGCCT 2 cut(s) 128, 265
StyD4I CCNGG 4 cut(s) 265, 412, 552, 1938
StyI CCWWGG 2 cut(s) 597, 1815
TaaI ACNGT 9 cut(s) 72, 161, 446, 664, 809, 956, 1726, 2337, 2438
TaiI ACGT 4 cut(s) 546, 1601, 2328, 2733
TaqI TCGA 9 cut(s) 105, 895, 1063, 1311, 1330, 1431, 1576, 2166, 2622
TaqII GACCGA 1 cut(s) 2175
TatI WGTACW 4 cut(s) 441, 1609, 2401, 2777
TfiI GAWTC 5 cut(s) 1624, 1667, 1915, 1961, 2098
TscAI CASTG 5 cut(s) 166, 667, 1249, 2211, 2770
TseFI GTSAC 2 cut(s) 161, 2146
TseI GCWGC 6 cut(s) 508, 802, 1160, 1532, 1717, 2617
Tsp45I GTSAC 2 cut(s) 161, 2146
TspRI CASTG 5 cut(s) 166, 667, 1249, 2211, 2770
Van91I CCANNNNNTGG 3 cut(s) 958, 1939, 2326
Vha464I CTTAAG 3 cut(s) 133, 1072, 1403
VneI GTGCAC 1 cut(s) 1743
VpaK11BI GGWCC 2 cut(s) 78, 739
VspI ATTAAT 2 cut(s) 1325, 2648
XagI CCTNNNNNAGG 2 cut(s) 133, 377
XapI RAATTY 6 cut(s) 637, 749, 1307, 1827, 1908, 2624
XbaI TCTAGA 3 cut(s) 826, 1514, 1750
XceI RCATGY 2 cut(s) 653, 2638
XcmI CCANNNNNNNNNTGG 2 cut(s) 993, 2803
XmiI GTMKAC 1 cut(s) 963
XmnI GAANNNNTTC 3 cut(s) 638, 1572, 2415
ZrmI AGTACT 1 cut(s) 2779
Zsp2I ATGCAT 2 cut(s) 874, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.