Rh7CG286600

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000482
Physical Location & Seq
Reverse (-)
29131958 .. 29134822
2865 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG286600.1

Sequence Viewer

Length: 2865 bp
ATGGCAGAAAGTGTAGTCACCTTTTTGGTTGACAGGCTCACGACATTACTAGAAGAAGAGGTGAAACTATTGTCAGGGATCCGAGAACAGGTCGAGGACTTGGTTGATGAATTGGAGCGCATCAAAGCCTTCTTAAGGGTAGCTGATGCAAAGGAAGACAGCAATCCTCAGCTCAAAGTGTGGGTAAAACAAGTCAGAGATGTAGCTCATGAAATGGAGGATGCCCTCGATAAATTCAGGCTTTTCCATTCACACGATCACAGCCATGGATTCCGAGCTTCCCTTCATAAGCTTTCTTGCATCATCAAGAAATGGAAAGTTCGCCATCAAATTTCTGATGATATTCAAAGAATAAACTCAAAAGTGAAAAGCCTCTCCGAGGGACATGAGAGATATACACTCGTTGACCAAGCTGGCTCCAGCTCTGCTCGGCTAGTTCAGCACCACAAATTTGGTCAAGGGGATTCCCTTTTACTGGAAGAGGCTGATCTTGTGGCAATTGGCGAGCGCAAAAAGCAACTGATTGAATTGCTTATGAAGGAAGACACTAGACGCCAGGTGGTTCCAGTACGCCAGGTGGTTCCAGTAGTTGGGATGGGTGGACTGGGGAAAACTACCTTGGTCAAGCAAGTCTACAAGGATCCAAAAGTTCAGAAACGTTTCAAGGTACATGCTTGGATCACTGTTTCTCGATCATTCAAGATAAGTCAGCTCCTAAGACACATGATCAATAAAATCTTCAAAGTTATCAGGAAACCAGTTCCTGAAGATGAAGAAGTTGAAACCATGGATGACAACCAGCTAAGAAAGACGATTAAAAAGTTGCTGCAGAATAGTAGGTACCTGATTGTTCTGGATGATATATGGCATATACCCGACTGGGAGGCCATCAATCATGCAATGCCAAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGCAATGTTAATGTAGCCTCTGCCTCTTGCTTGGGGAACCATGACATGTTCTACCGTTTAGAGCCCTTATCTCCGGAAGATTCATGGACTCTGTTCTGCAGGAAGACATTTCAAGGGAACTCATGCCTTCCAAATTTGGAGGAAATTTGTCGATCCATCCTGATGAAATGCGGGGGACTGCCCCTTGCAATTGTGGCCATCAGCGCTGTACTAGCTTTAAAAGACAAGAGAAATGTGGATGATTGGGCTGCTGTTTCTGGCAGTATTGGAGCCGAAATAGAAGGAAATGATCAACTTGACAACATGAAAAAATTGCTGTATCTCAGTTACAGTGATTTACCTTACCATCTGAAATCATGTTTCTTGTATCTGAGCATCTTTCCTGATCTCTACAAAATTGAGCATATGAGATTGATTCGGTTATGGTTAGCTGAAGGATTTGTTATTGGAAAAGAGGGAAGGACACCAGAAGAAGTTGCAGAGAGTTACCTTAGAGAGTTATTGGACAGAAGTTTGATTCAAGCAGCAGAAACATCAACTGATGGGAGAGTAAAATCATATCGCATCCATGATCTTTTACGGGAGATTGTCATTTTGAAGTCTAGAGAGCAAAACTTTGCAGCAATAGAGAAAGAGCACGGTACAATGTGGTCTGAGAAAGTTCGACGACTATCAATAGTTAACACACTGCAGAATGCACATCAAAAGAGGACACCGTCTCAACTTCGTTCTTTGCTCGTTTTTGGGGTAGAAGATTCACTTACTGATTTTCCCATACCAAAATTGTTTCCTACAGGTGTTCAGTTGCTTACAGTATTAGACTTACAAGGTGCACATCTGGATATGTTTCCAAGAGAGGTTGTCAAGCTTCTTCTTCTCAGGTATCTTAGCTTGAGGCATACAAAGGTGAAACAAATTCCAGGCTCCATCAAGAAGCTACAAAACCTAGAGACCTTGGATCTTAAACACTCGCAAGTTGTTGAATTACCTTCTGAGATTTTGAATCTCAAGCGACTTCGTCATCTCCTGGTGTATCGTTATGAGGTTGAGTCATATGCACGCTTCAATGCCAGAAAAGGAGTTAAGGTCCCTGCAGGAATATGTGGTTTGCAATTGCTCCAAAAGCTTTGCTTTATAGAGGCAAATCAAGACACCGGTGCTTTAATGGCAGAGCTCGGGAGAATGAACCAACTAAGGAGGTTAGGCATTTTCAAGTTGAGAAAAGAAGATGGGGTCACCTTATGTTCGTCCGTCCAAAATATGACCAAGCTTCGCTCGTTCTCTGTATCTTCAACAGAGAAGGACAAGATAATTGACCTTAGCCACATTTCTCGTGCTCCTCCATTTCTTCAGCGACTATACTTGACAGGTCGTTTAGAAAAGTTACCACACTGGATTTCTTCTCTTCAAAACCTGGTCAGACTGTTTCTAAAATGGAGTCGGTTGAAGGAGGATCCTCTAGTACATCTTCAGGGTTTGCCAAACCTGGTACATCTTGAACTTCTGCAAGTTTATGATGGAGAAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATCGGTAACCATAGAGAAGGGAGCGATGCCTTGTCTAGAAAAGTTAATTATCCAGCGGTGTAAATTGTTAAGGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAATTTTTCGATATGCCAGATGAATTGATCATGCCACTACATCCAGATGGTGGAGAAGATCATTGGAAAGTTGCTCATGTTCCAGCAGTTTATTATTCCTATTGGAGAGGTGGGGGTTGGGACGTCTATTCATTAGTCAATGAAGGGGAGAGTTTTAATTCGGGTACTTCTGCCGAGAGGAGGCTCGAACGTAATATTCTGTGGAAGGTGTAG

Protein Analysis

954

Amino Acids

109.49

Weight (kDa)

8.95

Isoelectric Point (pI)

42.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 89 1.6e-25 Rx N-terminal domain
NB-ARC PF00931 171 - 355 1.4e-43 NB-ARC domain
WHD_DRP PF23559 440 - 511 1.1e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 555 - 884 2.2e-47 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2778
Acc65I GGTACC 1 cut(s) 840
AccB1I GGYRCC 1 cut(s) 840
AccB7I CCANNNNNTGG 2 cut(s) 590, 2702
AccI GTMKAC 1 cut(s) 633
AccIII TCCGGA 1 cut(s) 1015
AciI CCGC 2 cut(s) 1113, 2593
AclI AACGTT 1 cut(s) 658
AclWI GGATC 9 cut(s) 73, 86, 635, 648, 686, 1089, 1908, 2390, 2403
AcoI YGGCCR 1 cut(s) 1137
AcsI RAATTY 7 cut(s) 233, 330, 449, 1075, 1086, 1857, 2654
AcuI CTGAAG 5 cut(s) 786, 1395, 2276, 2396, 2522
AcyI GRCGYC 2 cut(s) 553, 2775
AfaI GTAC 8 cut(s) 570, 669, 842, 1152, 1585, 2406, 2433, 2818
AfeI AGCGCT 1 cut(s) 1147
AfiI CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 590, 2702, 2832
AflII CTTAAG 1 cut(s) 133
AflIII ACRYGT 1 cut(s) 987
AgeI ACCGGT 1 cut(s) 2096
AjnI CCWGG 6 cut(s) 555, 573, 1861, 1968, 2355, 2427
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
Alw21I GWGCWC 4 cut(s) 1581, 1777, 2118, 2281
Alw26I GTCTC 2 cut(s) 1665, 1886
Alw44I GTGCAC 1 cut(s) 1773
AlwI GGATC 9 cut(s) 73, 86, 635, 648, 686, 1089, 1908, 2390, 2403
AlwNI CAGNNNCTG 1 cut(s) 764
Ama87I CYCGRG 1 cut(s) 2117
Aor13HI TCCGGA 1 cut(s) 1015
Aor51HI AGCGCT 1 cut(s) 1147
AoxI GGCC 2 cut(s) 885, 1137
ApaLI GTGCAC 1 cut(s) 1773
ApeKI GCWGC 5 cut(s) 826, 1190, 1466, 1562, 2647
ApoI RAATTY 7 cut(s) 233, 330, 449, 1075, 1086, 1857, 2654
AsiGI ACCGGT 1 cut(s) 2096
Asp700I GAANNNNTTC 1 cut(s) 659
Asp718I GGTACC 1 cut(s) 840
AspLEI GCGC 3 cut(s) 120, 510, 1148
AspS9I GGNCC 2 cut(s) 2029, 2611
AsuHPI GGTGA 4 cut(s) 10, 73, 1861, 2170
AvaI CYCGRG 1 cut(s) 2117
AvaII GGWCC 2 cut(s) 2029, 2611
BaeGI GKGCMC 1 cut(s) 1777
BalI TGGCCA 1 cut(s) 1139
BamHI GGATCC 3 cut(s) 78, 640, 2395
BanI GGYRCC 1 cut(s) 840
BanII GRGCYC 2 cut(s) 1008, 2118
BauI CACGAG 1 cut(s) 2274
BbsI GAAGAC 3 cut(s) 162, 549, 1052
Bbv12I GWGCWC 4 cut(s) 1581, 1777, 2118, 2281
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 5 cut(s) 813, 1177, 1478, 1574, 2634
BciT130I CCWGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
BclI TGATCA 3 cut(s) 726, 1231, 2679
BcoDI GTCTC 2 cut(s) 1665, 1886
BfaI CTAG 8 cut(s) 50, 434, 549, 1154, 1545, 1889, 2402, 2573
BfmI CTRYAG 5 cut(s) 827, 1039, 1631, 1734, 2034
BfoI RGCGCY 1 cut(s) 1149
BfrI CTTAAG 1 cut(s) 133
BisI GCNGC 5 cut(s) 827, 1191, 1467, 1563, 2648
BlsI GCNGC 5 cut(s) 828, 1192, 1468, 1564, 2649
Bme1390I CCNGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
Bme18I GGWCC 2 cut(s) 2029, 2611
BmeT110I CYCGRG 1 cut(s) 2117
BmgT120I GGNCC 2 cut(s) 2029, 2611
BmrFI CCNGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
BmrI ACTGGG 2 cut(s) 614, 889
BmsI GCATC 7 cut(s) 129, 136, 211, 309, 1326, 1515, 2553
BmuI ACTGGG 2 cut(s) 614, 889
BpiI GAAGAC 3 cut(s) 162, 549, 1052
BplI GAGNNNNNCTC 2 cut(s) 918, 950
BpmI CTGGAG 1 cut(s) 403
Bpu10I CCTNAGC 2 cut(s) 168, 2261
BpuEI CTTGAG 2 cut(s) 1855, 1934
BsaHI GRCGYC 2 cut(s) 553, 2775
BsaI GGTCTC 1 cut(s) 1886
BsaJI CCNNGG 5 cut(s) 265, 378, 618, 786, 1896
BsaWI WCCGGW 2 cut(s) 1015, 2096
BsaXI ACNNNNNCTCC 2 cut(s) 2013, 2043
Bsc4I CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 590, 2702, 2832
Bse118I RCCGGY 1 cut(s) 2096
Bse1I ACTGG 7 cut(s) 480, 566, 584, 609, 758, 884, 2339
Bse3DI GCAATG 2 cut(s) 906, 952
BseAI TCCGGA 1 cut(s) 1015
BseBI CCWGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
BseDI CCNNGG 5 cut(s) 265, 378, 618, 786, 1896
BseGI GGATG 9 cut(s) 226, 600, 796, 862, 1098, 1186, 1506, 2533, 2692
BseLI CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 590, 2702, 2832
BseMI GCAATG 2 cut(s) 906, 952
BseMII CTCAG 6 cut(s) 182, 1279, 1304, 1587, 1834, 1926
BseNI ACTGG 7 cut(s) 480, 566, 584, 609, 758, 884, 2339
BseRI GAGGAG 2 cut(s) 2271, 2845
BseSI GKGCMC 1 cut(s) 1777
BseXI GCAGC 5 cut(s) 813, 1177, 1478, 1574, 2634
BshFI GGCC 2 cut(s) 887, 1139
BshNI GGYRCC 1 cut(s) 840
BshTI ACCGGT 1 cut(s) 2096
BsiHKAI GWGCWC 4 cut(s) 1581, 1777, 2118, 2281
BsiHKCI CYCGRG 1 cut(s) 2117
BsiSI CCGG 2 cut(s) 1016, 2097
BslFI GGGAC 5 cut(s) 396, 1131, 2015, 2597, 2786
BslI CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 590, 2702, 2832
BsmAI GTCTC 2 cut(s) 1665, 1886
BsmBI CGTCTC 1 cut(s) 1665
BsmFI GGGAC 5 cut(s) 396, 1131, 2015, 2597, 2786
BsmI GAATGC 1 cut(s) 1642
BsnI GGCC 2 cut(s) 887, 1139
Bso31I GGTCTC 1 cut(s) 1886
BsoBI CYCGRG 1 cut(s) 2117
Bsp1286I GDGCHC 5 cut(s) 1008, 1581, 1777, 2118, 2281
Bsp13I TCCGGA 1 cut(s) 1015
Bsp19I CCATGG 2 cut(s) 265, 786
BspACI CCGC 2 cut(s) 1113, 2593
BspANI GGCC 2 cut(s) 887, 1139
BspCNI CTCAG 6 cut(s) 181, 1278, 1305, 1588, 1833, 1927
BspEI TCCGGA 1 cut(s) 1015
BspHI TCATGA 1 cut(s) 208
BspMAI CTGCAG 4 cut(s) 831, 1043, 1635, 2038
BspPI GGATC 9 cut(s) 73, 86, 635, 648, 686, 1089, 1908, 2390, 2403
BspT107I GGYRCC 1 cut(s) 840
BspTI CTTAAG 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 1886
BsrDI GCAATG 2 cut(s) 906, 952
BsrFI RCCGGY 1 cut(s) 2096
BsrI ACTGG 7 cut(s) 480, 566, 584, 609, 758, 884, 2339
BssAI RCCGGY 1 cut(s) 2096
BssECI CCNNGG 5 cut(s) 265, 378, 618, 786, 1896
BssNI GRCGYC 2 cut(s) 553, 2775
BssSI CACGAG 1 cut(s) 2274
BssT1I CCWWGG 4 cut(s) 265, 618, 786, 1896
Bst2BI CACGAG 1 cut(s) 2274
Bst2UI CCWGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
Bst4CI ACNGT 7 cut(s) 685, 998, 1274, 1583, 1659, 1756, 2367
Bst6I CTCTTC 3 cut(s) 51, 474, 2352
BstACI GRCGYC 2 cut(s) 553, 2775
BstAFI CTTAAG 1 cut(s) 133
BstC8I GCNNGC 4 cut(s) 415, 506, 2002, 2471
BstDSI CCRYGG 2 cut(s) 265, 786
BstEII GGTNACC 2 cut(s) 2176, 2542
BstENI CCTNNNNNAGG 2 cut(s) 133, 377
BstF5I GGATG 9 cut(s) 226, 600, 796, 862, 1098, 1186, 1506, 2533, 2692
BstH2I RGCGCY 1 cut(s) 1149
BstHHI GCGC 3 cut(s) 120, 510, 1148
BstMAI GTCTC 2 cut(s) 1665, 1886
BstMWI GCNNNNNNNGC 7 cut(s) 439, 514, 1136, 1145, 1154, 2065, 2108
BstNI CCWGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
BstNSI RCATGY 2 cut(s) 674, 991
BstPI GGTNACC 2 cut(s) 2176, 2542
BstSCI CCNGG 6 cut(s) 555, 573, 1861, 1968, 2355, 2427
BstSFI CTRYAG 5 cut(s) 827, 1039, 1631, 1734, 2034
BstSLI GKGCMC 1 cut(s) 1777
BstV1I GCAGC 5 cut(s) 813, 1177, 1478, 1574, 2634
BstV2I GAAGAC 3 cut(s) 162, 549, 1052
BstX2I RGATCY 4 cut(s) 78, 640, 1900, 2395
BstXI CCANNNNNNTGG 1 cut(s) 452
BstYI RGATCY 4 cut(s) 78, 640, 1900, 2395
BsuRI GGCC 2 cut(s) 887, 1139
BtgI CCRYGG 2 cut(s) 265, 786
BtgZI GCGATG 1 cut(s) 2576
BtsCI GGATG 9 cut(s) 226, 600, 796, 862, 1098, 1186, 1506, 2533, 2692
BtsI GCAGTG 1 cut(s) 1628
BtsIMutI CAGTG 4 cut(s) 681, 1279, 1628, 2332
Cac8I GCNNGC 4 cut(s) 415, 506, 2002, 2471
CaiI CAGNNNCTG 1 cut(s) 764
CciI TCATGA 1 cut(s) 208
CfoI GCGC 3 cut(s) 120, 510, 1148
Cfr10I RCCGGY 1 cut(s) 2096
Cfr13I GGNCC 2 cut(s) 2029, 2611
CseI GACGC 1 cut(s) 561
CsiI ACCWGGT 2 cut(s) 2355, 2427
Csp6I GTAC 8 cut(s) 569, 668, 841, 1151, 1584, 2405, 2432, 2817
CspAI ACCGGT 1 cut(s) 2096
CspCI CAANNNNNGTGG 2 cut(s) 898, 933
CviQI GTAC 8 cut(s) 569, 668, 841, 1151, 1584, 2405, 2432, 2817
DraI TTTAAA 2 cut(s) 1161, 2643
EaeI YGGCCR 1 cut(s) 1137
Eam1104I CTCTTC 3 cut(s) 51, 474, 2352
EarI CTCTTC 3 cut(s) 51, 474, 2352
Ecl136II GAGCTC 1 cut(s) 2116
Eco130I CCWWGG 4 cut(s) 265, 618, 786, 1896
Eco24I GRGCYC 2 cut(s) 1008, 2118
Eco31I GGTCTC 1 cut(s) 1886
Eco47I GGWCC 2 cut(s) 2029, 2611
Eco47III AGCGCT 1 cut(s) 1147
Eco53kI GAGCTC 1 cut(s) 2116
Eco57I CTGAAG 5 cut(s) 786, 1395, 2276, 2396, 2522
Eco88I CYCGRG 1 cut(s) 2117
Eco91I GGTNACC 2 cut(s) 2176, 2542
EcoICRI GAGCTC 1 cut(s) 2116
EcoNI CCTNNNNNAGG 2 cut(s) 133, 377
EcoO109I RGGNCCY 2 cut(s) 2029, 2611
EcoO65I GGTNACC 2 cut(s) 2176, 2542
EcoRII CCWGG 6 cut(s) 555, 573, 1861, 1968, 2355, 2427
EcoT14I CCWWGG 4 cut(s) 265, 618, 786, 1896
EcoT38I GRGCYC 2 cut(s) 1008, 2118
ErhI CCWWGG 4 cut(s) 265, 618, 786, 1896
Esp3I CGTCTC 1 cut(s) 1665
FalI AAGNNNNNCTT 4 cut(s) 1686, 1718, 2057, 2089
FaqI GGGAC 5 cut(s) 396, 1131, 2015, 2597, 2786
FauI CCCGC 1 cut(s) 1106
FauNDI CATATG 2 cut(s) 1347, 1996
FbaI TGATCA 3 cut(s) 726, 1231, 2679
FblI GTMKAC 1 cut(s) 633
Fnu4HI GCNGC 5 cut(s) 827, 1191, 1467, 1563, 2648
FokI GGATG 9 cut(s) 233, 607, 803, 869, 1085, 1193, 1493, 2540, 2679
FriOI GRGCYC 2 cut(s) 1008, 2118
Fsp4HI GCNGC 5 cut(s) 827, 1191, 1467, 1563, 2648
FspBI CTAG 8 cut(s) 50, 434, 549, 1154, 1545, 1889, 2402, 2573
GlaI GCGC 3 cut(s) 119, 509, 1147
GluI GCNGC 5 cut(s) 827, 1191, 1467, 1563, 2648
GsuI CTGGAG 1 cut(s) 403
HaeII RGCGCY 1 cut(s) 1149
HaeIII GGCC 2 cut(s) 887, 1139
HapII CCGG 2 cut(s) 1016, 2097
HgaI GACGC 1 cut(s) 561
HhaI GCGC 3 cut(s) 120, 510, 1148
Hin1I GRCGYC 2 cut(s) 553, 2775
Hin6I GCGC 3 cut(s) 118, 508, 1146
HinP1I GCGC 3 cut(s) 118, 508, 1146
HincII GTYRAC 3 cut(s) 31, 406, 1624
HindII GTYRAC 3 cut(s) 31, 406, 1624
HindIII AAGCTT 5 cut(s) 290, 1808, 2066, 2210, 2467
HpaI GTTAAC 1 cut(s) 1624
HpaII CCGG 2 cut(s) 1016, 2097
HphI GGTGA 4 cut(s) 10, 73, 1861, 2170
Hpy166II GTNNAC 6 cut(s) 31, 406, 602, 634, 1624, 1775
Hpy8I GTNNAC 6 cut(s) 31, 406, 602, 634, 1624, 1775
Hpy99I CGWCG 1 cut(s) 1611
HpyCH4III ACNGT 7 cut(s) 685, 998, 1274, 1583, 1659, 1756, 2367
HpyCH4IV ACGT 3 cut(s) 658, 2775, 2842
HpyF10VI GCNNNNNNNGC 7 cut(s) 439, 514, 1136, 1145, 1154, 2065, 2108
HpySE526I ACGT 3 cut(s) 658, 2775, 2842
Hsp92I GRCGYC 2 cut(s) 553, 2775
HspAI GCGC 3 cut(s) 118, 508, 1146
KflI GGGWCCC 1 cut(s) 2611
Kpn2I TCCGGA 1 cut(s) 1015
KpnI GGTACC 1 cut(s) 844
Ksp22I TGATCA 3 cut(s) 726, 1231, 2679
KspAI GTTAAC 1 cut(s) 1624
LmnI GCTCC 8 cut(s) 115, 422, 717, 1211, 1871, 2064, 2284, 2558
Lsp1109I GCAGC 5 cut(s) 813, 1177, 1478, 1574, 2634
LweI GCATC 7 cut(s) 129, 136, 211, 309, 1326, 1515, 2553
MabI ACCWGGT 2 cut(s) 2355, 2427
MaeI CTAG 8 cut(s) 50, 434, 549, 1154, 1545, 1889, 2402, 2573
MaeII ACGT 3 cut(s) 658, 2775, 2842
MaeIII GTNAC 6 cut(s) 16, 1268, 1427, 2176, 2325, 2542
MfeI CAATTG 3 cut(s) 498, 1131, 2054
MflI RGATCY 4 cut(s) 78, 640, 1900, 2395
MhlI GDGCHC 5 cut(s) 1008, 1581, 1777, 2118, 2281
MlsI TGGCCA 1 cut(s) 1139
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 3 cut(s) 1024, 2000, 2389
Mox20I TGGCCA 1 cut(s) 1139
MroI TCCGGA 1 cut(s) 1015
MroXI GAANNNNTTC 1 cut(s) 659
MscI TGGCCA 1 cut(s) 1139
MslI CAYNNNNRTG 3 cut(s) 264, 1103, 2697
Msp20I TGGCCA 1 cut(s) 1139
MspA1I CMGCKG 1 cut(s) 2593
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 2 cut(s) 1016, 2097
MspR9I CCNGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
MunI CAATTG 3 cut(s) 498, 1131, 2054
Mva1269I GAATGC 1 cut(s) 1642
MvaI CCWGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
MwoI GCNNNNNNNGC 7 cut(s) 439, 514, 1136, 1145, 1154, 2065, 2108
NcoI CCATGG 2 cut(s) 265, 786
NdeI CATATG 2 cut(s) 1347, 1996
NmeAIII GCCGAG 2 cut(s) 409, 2851
NmuCI GTSAC 2 cut(s) 16, 2176
NspI RCATGY 2 cut(s) 674, 991
PagI TCATGA 1 cut(s) 208
PciI ACATGT 1 cut(s) 987
PcsI WCGNNNNNNNCGW 1 cut(s) 922
PctI GAATGC 1 cut(s) 1642
PdmI GAANNNNTTC 1 cut(s) 659
PfeI GAWTC 7 cut(s) 270, 464, 1022, 1357, 1459, 1697, 1945
PflFI GACNNNGTC 2 cut(s) 1657, 1959
PflMI CCANNNNNTGG 2 cut(s) 590, 2702
PinAI ACCGGT 1 cut(s) 2096
PkrI GCNGC 5 cut(s) 828, 1192, 1468, 1564, 2649
PleI GAGTC 3 cut(s) 1024, 1999, 2388
PpsI GAGTC 3 cut(s) 1024, 1999, 2388
PpuMI RGGWCCY 2 cut(s) 2029, 2611
PscI ACATGT 1 cut(s) 987
Psp124BI GAGCTC 1 cut(s) 2118
Psp1406I AACGTT 1 cut(s) 658
Psp5II RGGWCCY 2 cut(s) 2029, 2611
Psp6I CCWGG 6 cut(s) 555, 573, 1861, 1968, 2355, 2427
PspEI GGTNACC 2 cut(s) 2176, 2542
PspGI CCWGG 6 cut(s) 555, 573, 1861, 1968, 2355, 2427
PspPI GGNCC 2 cut(s) 2029, 2611
PspPPI RGGWCCY 2 cut(s) 2029, 2611
PstI CTGCAG 4 cut(s) 831, 1043, 1635, 2038
PstNI CAGNNNCTG 1 cut(s) 764
PsuI RGATCY 4 cut(s) 78, 640, 1900, 2395
PsyI GACNNNGTC 2 cut(s) 1657, 1959
RsaI GTAC 8 cut(s) 570, 669, 842, 1152, 1585, 2406, 2433, 2818
RsaNI GTAC 8 cut(s) 569, 668, 841, 1151, 1584, 2405, 2432, 2817
RseI CAYNNNNRTG 3 cut(s) 264, 1103, 2697
SacI GAGCTC 1 cut(s) 2118
SatI GCNGC 5 cut(s) 827, 1191, 1467, 1563, 2648
Sau96I GGNCC 2 cut(s) 2029, 2611
SbfI CCTGCAGG 1 cut(s) 2038
SchI GAGTC 3 cut(s) 1024, 2000, 2389
ScrFI CCNGG 6 cut(s) 557, 575, 1863, 1970, 2357, 2429
SdaI CCTGCAGG 1 cut(s) 2038
SduI GDGCHC 5 cut(s) 1008, 1581, 1777, 2118, 2281
SexAI ACCWGGT 2 cut(s) 2355, 2427
SfaNI GCATC 7 cut(s) 129, 136, 211, 309, 1326, 1515, 2553
SfcI CTRYAG 5 cut(s) 827, 1039, 1631, 1734, 2034
SgrAI CRCCGGYG 1 cut(s) 2096
SinI GGWCC 2 cut(s) 2029, 2611
SmiMI CAYNNNNRTG 3 cut(s) 264, 1103, 2697
SmlI CTYRAG 3 cut(s) 133, 1834, 1949
SmoI CTYRAG 3 cut(s) 133, 1834, 1949
Sse8387I CCTGCAGG 1 cut(s) 2038
SsiI CCGC 2 cut(s) 1113, 2593
SspI AATATT 1 cut(s) 2848
SspMI CTAG 8 cut(s) 50, 434, 549, 1154, 1545, 1889, 2402, 2573
SstI GAGCTC 1 cut(s) 2118
StyD4I CCNGG 6 cut(s) 555, 573, 1861, 1968, 2355, 2427
StyI CCWWGG 4 cut(s) 265, 618, 786, 1896
TaaI ACNGT 7 cut(s) 685, 998, 1274, 1583, 1659, 1756, 2367
TaiI ACGT 3 cut(s) 661, 2778, 2845
TaqI TCGA 8 cut(s) 93, 228, 691, 925, 1093, 1606, 2661, 2838
TatI WGTACW 2 cut(s) 1150, 2404
TfiI GAWTC 7 cut(s) 270, 464, 1022, 1357, 1459, 1697, 1945
TscAI CASTG 4 cut(s) 688, 1279, 1635, 2339
TseFI GTSAC 2 cut(s) 16, 2176
TseI GCWGC 5 cut(s) 826, 1190, 1466, 1562, 2647
Tsp45I GTSAC 2 cut(s) 16, 2176
TspGWI ACGGA 1 cut(s) 2182
TspRI CASTG 4 cut(s) 688, 1279, 1635, 2339
Tth111I GACNNNGTC 2 cut(s) 1657, 1959
Van91I CCANNNNNTGG 2 cut(s) 590, 2702
Vha464I CTTAAG 1 cut(s) 133
VneI GTGCAC 1 cut(s) 1773
VpaK11BI GGWCC 2 cut(s) 2029, 2611
XagI CCTNNNNNAGG 2 cut(s) 133, 377
XapI RAATTY 7 cut(s) 233, 330, 449, 1075, 1086, 1857, 2654
XbaI TCTAGA 2 cut(s) 1544, 2572
XceI RCATGY 2 cut(s) 674, 991
XmiI GTMKAC 1 cut(s) 633
XmnI GAANNNNTTC 1 cut(s) 659
XspI CTAG 8 cut(s) 50, 434, 549, 1154, 1545, 1889, 2402, 2573
ZraI GACGTC 1 cut(s) 2776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.