Rh7DG274900

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
29560674 .. 29563517
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG274900.1

Sequence Viewer

Length: 1962 bp
ATGGCAGAAAGTGTAGTGACCTTTTTAGTTGGCAAGGTCAAGTCACTACTGGAAGGAGAGGTGAACCTATTGTCAGGGATCCAAGCACAGGTCAAGGACATGGTTAATGAATTAGAGCGCATTCAGGCGTTCATAAGGGTTGCTGATGCAAGGGAAGACGGTGACCCTCAACTCAAAGTGTGGGTCAAACAAATCAGAGAAGTGGCTCATGAGATGGAAGATGCCCTGGATAAATTCAGGCTTTCCTATTCCAATGACCCCCTGCGTGGCTTTCGTACTTCACTTAAGAAGCTTACTTGCATCATAAAGAAATGGAAAGCTTGCCATGAAATTGCTGCTGATATTGAAGGGCTAAACTCCAAAGTCAGAAGCCTCAGAGAGAGACGTGACGCATACAATCTTGTTGGCGAAGCTGGCTCCACCTCTTCTCGTCGGATTGGGCAACGTCACTTTGGTCAAGGGGATGCCCTCTTACTGGAAGCAGCTGATCTTGTGGCAATCAGGGAGCCTAAAAAACAGCTGATCGAGTTGCTTATGAAGCATGAGCCAGGACGCCAGGCAGCAGAAACAGCAACTGATGGGAGAGTCAAATCATATCGTATCCACAATGTTTTACGAGAGATTGTCATTTCAAAGTCCAAAGAGCAAAATTTTGCAGCAATGGAGAAAGAGAAAGATATAGTGTGGCCAGAAAAAGTTCGAAGACTATCAATAGTTAACTCGGTGCAGAATGTACAAAAGAAGAGGACTCCATCTACACTTCGCTCTTTGCTCATCTTTGGGGTAGAAGGTTCACTTTCTGACTTTTCCATACCAAAATTATTTCCTATAGGTCTTCAGTTGCTTACTGTATTAGACTTGCAAGGTGCACATATAGAGGTCTTTCCAAAAGAGGTTGTCAAGCTGGTTCTTCTCAGGTTTCTTAGCCTGAGGAGTAGCAAGGTGAAACAAATTCCAACCTCCATCAAGAAGCTAAGATACTTACAGACTCTGGACCTTAAACACTCCCATGTCGTTGAATTGCCAGCTGAGATTTTGAATCTCAAGCAACTTCGCCATCTCCTGGTATATCGTTATGAAGTTGAGTCTTATGCACGCTTTAATTCCAAATATGGAGTTAAGGTTCCTGCAGGAATATGTGGCTTGGAAAATCTCCAAAAGCTGTGTAAAATAGAGGCAAATCAAGACAATGGTGCTTTAATGGCAGACCTTGAAAGATTGACTCAACTAAGGAGGTTAGGCATTTTAAAGTTGAGAGAAGAAGATGGACTAGCCTTATGTTTATCCATTCAAAAGATGAAAAACCTTCGCGCATTGTCTGTATCTTCAGGAGAGAAGGAAGGGACAATTGATCTGAGCCATATTTCTTGTGCTCCTGAATTTCTTCAGCGACTGTACTTGACAGGTCGTTTAGAAAACTTACCACACTGGATTTCTTCTCTTCAAAACCTGGTCCGACTGTTTCTAAAATGGAGTCGGTTGAAGGAAGATCCTGTTGTCCATCTTCAACGCTTGCCAAATTTGGTACATCTTGAACTCCTACAAGTTTATGATGGGGAAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAATCTGAAGTTACTAGGTATTGATAAATTAGAAGAACTTCAATTGGTAAAGATAGATAAGGGAGCAATGCCTTGTCTAGAAAAGCTTATTATCCAACGCTGTAAATTGTTGAAGAAGGTCCCATATGGCATTGAATTCTTAACCAGTTTGAAGTTGCTTGAATTTTTCGATATGCCAGATGAATTAATCATGCCACTACATCCAGATGATGGAGAAGATCATTGGAGAGTCGCTCATGTCCCGGCAGTTTATTATTCCTATTGGAAAGGTGGCGGTTGGGATGTCTACTCATTAGTCAATGACGGGGAGGGATTTCATCATGGTACTTCTGCCATAAGGAGGCTCGAACCTAATATACTATGGAAGGTCTAG

Protein Analysis

653

Amino Acids

74.45

Weight (kDa)

9.1

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 82 1.4e-23 Rx N-terminal domain
LRR_14 PF23598 254 - 583 8.2e-46 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1063, 1799
AccI GTMKAC 1 cut(s) 1875
AccII CGCG 1 cut(s) 1311
AciI CCGC 1 cut(s) 1863
AclWI GGATC 3 cut(s) 73, 86, 1484
AcoI YGGCCR 1 cut(s) 686
AcsI RAATTY 7 cut(s) 233, 649, 951, 1379, 1519, 1724, 1751
AcuI CTGAAG 4 cut(s) 821, 1311, 1370, 1616
AcyI GRCGYC 1 cut(s) 553
AfaI GTAC 5 cut(s) 277, 735, 1397, 1527, 1915
AfiI CCNNNNNNNGG 6 cut(s) 88, 266, 475, 1063, 1799, 1929
AflII CTTAAG 1 cut(s) 284
AjiI CACGTC 1 cut(s) 386
AjnI CCWGG 5 cut(s) 225, 547, 555, 1062, 1449
AloI GAACNNNNNNTCC 2 cut(s) 1107, 1139
Alw21I GWGCWC 2 cut(s) 871, 1375
Alw26I GTCTC 1 cut(s) 376
Alw44I GTGCAC 1 cut(s) 867
AlwI GGATC 3 cut(s) 73, 86, 1484
AlwNI CAGNNNCTG 3 cut(s) 575, 991, 1393
AoxI GGCC 1 cut(s) 686
ApaLI GTGCAC 1 cut(s) 867
ApeKI GCWGC 4 cut(s) 335, 482, 560, 656
ApoI RAATTY 7 cut(s) 233, 649, 951, 1379, 1519, 1724, 1751
ArsI GACNNNNNNTTYG 2 cut(s) 168, 200
AseI ATTAAT 1 cut(s) 1775
Asp700I GAANNNNTTC 3 cut(s) 696, 1383, 1626
AspLEI GCGC 2 cut(s) 120, 1313
AspS9I GGNCC 3 cut(s) 994, 1453, 1708
AsuC2I CCSGG 1 cut(s) 1832
AsuHPI GGTGA 3 cut(s) 73, 173, 955
AsuII TTCGAA 1 cut(s) 700
AvaII GGWCC 3 cut(s) 994, 1453, 1708
AxyI CCTNAGG 1 cut(s) 929
BaeGI GKGCMC 1 cut(s) 871
BalI TGGCCA 1 cut(s) 688
BamHI GGATCC 1 cut(s) 78
BarI GAAGNNNNNNTAC 2 cut(s) 962, 994
BbsI GAAGAC 3 cut(s) 162, 709, 827
Bbv12I GWGCWC 2 cut(s) 871, 1375
BbvI GCAGC 4 cut(s) 322, 494, 572, 668
BccI CCATC 9 cut(s) 208, 572, 760, 971, 1065, 1259, 1509, 1547, 1793
BciT130I CCWGG 5 cut(s) 227, 549, 557, 1064, 1451
BciVI GTATCC 1 cut(s) 611
BcnI CCSGG 1 cut(s) 1832
BcoDI GTCTC 1 cut(s) 376
BfaI CTAG 4 cut(s) 1271, 1604, 1667, 1960
BfmI CTRYAG 2 cut(s) 828, 1128
BfrI CTTAAG 1 cut(s) 284
BfuI GTATCC 1 cut(s) 611
BisI GCNGC 4 cut(s) 336, 483, 561, 657
BlsI GCNGC 4 cut(s) 337, 484, 562, 658
Bme1390I CCNGG 6 cut(s) 227, 549, 557, 1064, 1451, 1832
Bme18I GGWCC 3 cut(s) 994, 1453, 1708
BmgBI CACGTC 1 cut(s) 386
BmgT120I GGNCC 3 cut(s) 994, 1453, 1708
BmiI GGNNCC 5 cut(s) 80, 418, 507, 1125, 1710
BmrFI CCNGG 6 cut(s) 227, 549, 557, 1064, 1451, 1832
BmsI GCATC 4 cut(s) 136, 211, 309, 454
BpiI GAAGAC 3 cut(s) 162, 709, 827
BplI GAGNNNNNCTC 2 cut(s) 1807, 1839
Bpu14I TTCGAA 1 cut(s) 700
BpuEI CTTGAG 1 cut(s) 1028
BpuMI CCSGG 1 cut(s) 1832
BsaHI GRCGYC 1 cut(s) 553
BsaJI CCNNGG 1 cut(s) 225
BsaXI ACNNNNNCTCC 2 cut(s) 1107, 1137
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 266, 475, 1063, 1799, 1929
Bse1I ACTGG 4 cut(s) 54, 480, 1433, 1734
Bse21I CCTNAGG 1 cut(s) 929
Bse3DI GCAATG 2 cut(s) 666, 1662
BseBI CCWGG 5 cut(s) 227, 549, 557, 1064, 1451
BseDI CCNNGG 1 cut(s) 225
BseGI GGATG 3 cut(s) 469, 1789, 1876
BseLI CCNNNNNNNGG 6 cut(s) 88, 266, 475, 1063, 1799, 1929
BseMI GCAATG 2 cut(s) 666, 1662
BseMII CTCAG 5 cut(s) 388, 920, 928, 1020, 1346
BseNI ACTGG 4 cut(s) 54, 480, 1433, 1734
BseRI GAGGAG 1 cut(s) 946
BseSI GKGCMC 1 cut(s) 871
BseXI GCAGC 4 cut(s) 322, 494, 572, 668
BsgI GTGCAG 1 cut(s) 746
Bsh1236I CGCG 1 cut(s) 1311
BshFI GGCC 1 cut(s) 688
BsiHKAI GWGCWC 2 cut(s) 871, 1375
BsiSI CCGG 1 cut(s) 1832
BslFI GGGAC 3 cut(s) 1357, 1694, 1814
BslI CCNNNNNNNGG 6 cut(s) 88, 266, 475, 1063, 1799, 1929
BsmAI GTCTC 1 cut(s) 376
BsmBI CGTCTC 1 cut(s) 376
BsmFI GGGAC 3 cut(s) 1357, 1694, 1814
BsmI GAATGC 1 cut(s) 120
BsnI GGCC 1 cut(s) 688
Bsp119I TTCGAA 1 cut(s) 700
Bsp1286I GDGCHC 2 cut(s) 871, 1375
Bsp1407I TGTACA 1 cut(s) 733
Bsp143I GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
BspACI CCGC 1 cut(s) 1863
BspANI GGCC 1 cut(s) 688
BspCNI CTCAG 5 cut(s) 387, 921, 927, 1021, 1347
BspFNI CGCG 1 cut(s) 1311
BspHI TCATGA 1 cut(s) 208
BspLI GGNNCC 5 cut(s) 80, 418, 507, 1125, 1710
BspMAI CTGCAG 1 cut(s) 1132
BspPI GGATC 3 cut(s) 73, 86, 1484
BspT104I TTCGAA 1 cut(s) 700
BspTI CTTAAG 1 cut(s) 284
BsrDI GCAATG 2 cut(s) 666, 1662
BsrGI TGTACA 1 cut(s) 733
BsrI ACTGG 4 cut(s) 54, 480, 1433, 1734
BssECI CCNNGG 1 cut(s) 225
BssMI GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
BssNI GRCGYC 1 cut(s) 553
Bst2UI CCWGG 5 cut(s) 227, 549, 557, 1064, 1451
Bst4CI ACNGT 4 cut(s) 161, 850, 1395, 1461
Bst6I CTCTTC 3 cut(s) 430, 737, 1446
BstACI GRCGYC 1 cut(s) 553
BstAFI CTTAAG 1 cut(s) 284
BstAUI TGTACA 1 cut(s) 733
BstBI TTCGAA 1 cut(s) 700
BstC8I GCNNGC 6 cut(s) 322, 415, 1026, 1096, 1514, 1565
BstDEI CTNAG 8 cut(s) 374, 914, 923, 929, 974, 1029, 1229, 1355
BstEII GGTNACC 1 cut(s) 161
BstF5I GGATG 3 cut(s) 469, 1789, 1876
BstFNI CGCG 1 cut(s) 1311
BstHHI GCGC 2 cut(s) 120, 1313
BstKTI GATC 6 cut(s) 81, 490, 525, 1354, 1492, 1810
BstMAI GTCTC 1 cut(s) 376
BstMBI GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
BstMWI GCNNNNNNNGC 4 cut(s) 414, 538, 569, 1202
BstNI CCWGG 5 cut(s) 227, 549, 557, 1064, 1451
BstPI GGTNACC 1 cut(s) 161
BstSCI CCNGG 6 cut(s) 225, 547, 555, 1062, 1449, 1830
BstSFI CTRYAG 2 cut(s) 828, 1128
BstSLI GKGCMC 1 cut(s) 871
BstUI CGCG 1 cut(s) 1311
BstV1I GCAGC 4 cut(s) 322, 494, 572, 668
BstV2I GAAGAC 3 cut(s) 162, 709, 827
BstX2I RGATCY 2 cut(s) 78, 1489
BstYI RGATCY 2 cut(s) 78, 1489
Bsu36I CCTNAGG 1 cut(s) 929
BsuI GTATCC 1 cut(s) 611
BsuRI GGCC 1 cut(s) 688
BtrI CACGTC 1 cut(s) 386
BtsCI GGATG 3 cut(s) 469, 1789, 1876
BtsIMutI CAGTG 1 cut(s) 1426
Cac8I GCNNGC 6 cut(s) 322, 415, 1026, 1096, 1514, 1565
CaiI CAGNNNCTG 3 cut(s) 575, 991, 1393
CciI TCATGA 1 cut(s) 208
CfoI GCGC 2 cut(s) 120, 1313
Cfr13I GGNCC 3 cut(s) 994, 1453, 1708
CseI GACGC 2 cut(s) 398, 561
CsiI ACCWGGT 1 cut(s) 1449
Csp6I GTAC 5 cut(s) 276, 734, 1396, 1526, 1914
CviAII CATG 8 cut(s) 100, 209, 326, 542, 1010, 1780, 1826, 1910
CviQI GTAC 5 cut(s) 276, 734, 1396, 1526, 1914
DdeI CTNAG 8 cut(s) 374, 914, 923, 929, 974, 1029, 1229, 1355
DpnI GATC 6 cut(s) 80, 489, 524, 1353, 1491, 1809
DpnII GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
DraI TTTAAA 1 cut(s) 1248
EaeI YGGCCR 1 cut(s) 686
Eam1104I CTCTTC 3 cut(s) 430, 737, 1446
EarI CTCTTC 3 cut(s) 430, 737, 1446
Eco47I GGWCC 3 cut(s) 994, 1453, 1708
Eco57I CTGAAG 4 cut(s) 821, 1311, 1370, 1616
Eco81I CCTNAGG 1 cut(s) 929
Eco91I GGTNACC 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 1708
EcoO65I GGTNACC 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 1724
EcoRII CCWGG 5 cut(s) 225, 547, 555, 1062, 1449
Esp3I CGTCTC 1 cut(s) 376
FaeI CATG 8 cut(s) 103, 212, 329, 545, 1013, 1783, 1829, 1913
FalI AAGNNNNNCTT 2 cut(s) 780, 812
FaqI GGGAC 3 cut(s) 1357, 1694, 1814
FatI CATG 8 cut(s) 99, 208, 325, 541, 1009, 1779, 1825, 1909
FauNDI CATATG 1 cut(s) 1714
FblI GTMKAC 1 cut(s) 1875
Fnu4HI GCNGC 4 cut(s) 336, 483, 561, 657
FokI GGATG 3 cut(s) 476, 1776, 1883
Fsp4HI GCNGC 4 cut(s) 336, 483, 561, 657
FspBI CTAG 4 cut(s) 1271, 1604, 1667, 1960
GlaI GCGC 2 cut(s) 119, 1312
GluI GCNGC 4 cut(s) 336, 483, 561, 657
HaeIII GGCC 1 cut(s) 688
HapII CCGG 1 cut(s) 1832
HgaI GACGC 2 cut(s) 398, 561
HhaI GCGC 2 cut(s) 120, 1313
Hin1I GRCGYC 1 cut(s) 553
Hin1II CATG 8 cut(s) 103, 212, 329, 545, 1013, 1783, 1829, 1913
Hin6I GCGC 2 cut(s) 118, 1311
HinP1I GCGC 2 cut(s) 118, 1311
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HindIII AAGCTT 4 cut(s) 290, 318, 1561, 1673
HinfI GANTC 8 cut(s) 585, 748, 988, 1039, 1085, 1222, 1474, 1818
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 1 cut(s) 1832
HphI GGTGA 3 cut(s) 73, 173, 955
Hpy166II GTNNAC 5 cut(s) 64, 718, 794, 869, 1876
Hpy188I TCNGA 8 cut(s) 197, 368, 377, 435, 802, 1356, 1457, 1596
Hpy188III TCNNGA 9 cut(s) 209, 967, 992, 1184, 1329, 1376, 1532, 1667, 1793
Hpy8I GTNNAC 5 cut(s) 64, 718, 794, 869, 1876
Hpy99I CGWCG 1 cut(s) 435
HpyAV CCTTC 9 cut(s) 47, 341, 782, 1316, 1330, 1334, 1477, 1699, 1948
HpyCH4III ACNGT 4 cut(s) 161, 850, 1395, 1461
HpyCH4IV ACGT 2 cut(s) 385, 445
HpyCH4V TGCA 9 cut(s) 149, 300, 656, 727, 862, 869, 1094, 1130, 1567
HpyF10VI GCNNNNNNNGC 4 cut(s) 414, 538, 569, 1202
HpyF3I CTNAG 8 cut(s) 374, 914, 923, 929, 974, 1029, 1229, 1355
HpySE526I ACGT 2 cut(s) 385, 445
Hsp92I GRCGYC 1 cut(s) 553
Hsp92II CATG 8 cut(s) 103, 212, 329, 545, 1013, 1783, 1829, 1913
HspAI GCGC 2 cut(s) 118, 1311
KspAI GTTAAC 1 cut(s) 718
Kzo9I GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
LmnI GCTCC 4 cut(s) 422, 505, 1378, 1652
Lsp1109I GCAGC 4 cut(s) 322, 494, 572, 668
LweI GCATC 4 cut(s) 136, 211, 309, 454
MabI ACCWGGT 1 cut(s) 1449
MaeI CTAG 4 cut(s) 1271, 1604, 1667, 1960
MaeII ACGT 2 cut(s) 385, 445
MaeIII GTNAC 6 cut(s) 16, 42, 161, 386, 446, 1599
MalI GATC 6 cut(s) 80, 489, 524, 1353, 1491, 1809
MboI GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
MfeI CAATTG 2 cut(s) 1347, 1631
MflI RGATCY 2 cut(s) 78, 1489
MhlI GDGCHC 2 cut(s) 871, 1375
MlsI TGGCCA 1 cut(s) 688
MluNI TGGCCA 1 cut(s) 688
MlyI GAGTC 7 cut(s) 594, 742, 982, 1094, 1216, 1483, 1827
MmeI TCCRAC 4 cut(s) 413, 980, 1480, 1708
Mox20I TGGCCA 1 cut(s) 688
MroXI GAANNNNTTC 3 cut(s) 696, 1383, 1626
MscI TGGCCA 1 cut(s) 688
MslI CAYNNNNRTG 2 cut(s) 1008, 1794
Msp20I TGGCCA 1 cut(s) 688
MspA1I CMGCKG 3 cut(s) 485, 520, 1028
MspCI CTTAAG 1 cut(s) 284
MspI CCGG 1 cut(s) 1832
MspR9I CCNGG 6 cut(s) 227, 549, 557, 1064, 1451, 1832
MunI CAATTG 2 cut(s) 1347, 1631
Mva1269I GAATGC 1 cut(s) 120
MvaI CCWGG 5 cut(s) 227, 549, 557, 1064, 1451
MvnI CGCG 1 cut(s) 1311
MwoI GCNNNNNNNGC 4 cut(s) 414, 538, 569, 1202
NciI CCSGG 1 cut(s) 1832
NdeI CATATG 1 cut(s) 1714
NdeII GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
NlaIII CATG 8 cut(s) 103, 212, 329, 545, 1013, 1783, 1829, 1913
NlaIV GGNNCC 5 cut(s) 80, 418, 507, 1125, 1710
NmuCI GTSAC 5 cut(s) 16, 42, 161, 386, 446
NspV TTCGAA 1 cut(s) 700
PagI TCATGA 1 cut(s) 208
PctI GAATGC 1 cut(s) 120
PdmI GAANNNNTTC 3 cut(s) 696, 1383, 1626
PfeI GAWTC 1 cut(s) 1039
PflMI CCANNNNNTGG 2 cut(s) 1063, 1799
PkrI GCNGC 4 cut(s) 337, 484, 562, 658
PleI GAGTC 7 cut(s) 593, 742, 982, 1093, 1216, 1482, 1826
PpsI GAGTC 7 cut(s) 593, 742, 982, 1093, 1216, 1482, 1826
PpuMI RGGWCCY 1 cut(s) 1708
PshBI ATTAAT 1 cut(s) 1775
Psp5II RGGWCCY 1 cut(s) 1708
Psp6I CCWGG 5 cut(s) 225, 547, 555, 1062, 1449
PspEI GGTNACC 1 cut(s) 161
PspGI CCWGG 5 cut(s) 225, 547, 555, 1062, 1449
PspN4I GGNNCC 5 cut(s) 80, 418, 507, 1125, 1710
PspPI GGNCC 3 cut(s) 994, 1453, 1708
PspPPI RGGWCCY 1 cut(s) 1708
PsrI GAACNNNNNNTAC 2 cut(s) 1929, 1961
PstI CTGCAG 1 cut(s) 1132
PstNI CAGNNNCTG 3 cut(s) 575, 991, 1393
PsuI RGATCY 2 cut(s) 78, 1489
PvuII CAGCTG 3 cut(s) 485, 520, 1028
RsaI GTAC 5 cut(s) 277, 735, 1397, 1527, 1915
RsaNI GTAC 5 cut(s) 276, 734, 1396, 1526, 1914
RseI CAYNNNNRTG 2 cut(s) 1008, 1794
SatI GCNGC 4 cut(s) 336, 483, 561, 657
Sau3AI GATC 6 cut(s) 78, 487, 522, 1351, 1489, 1807
Sau96I GGNCC 3 cut(s) 994, 1453, 1708
SbfI CCTGCAGG 1 cut(s) 1132
SchI GAGTC 7 cut(s) 594, 742, 982, 1094, 1216, 1483, 1827
ScrFI CCNGG 6 cut(s) 227, 549, 557, 1064, 1451, 1832
SdaI CCTGCAGG 1 cut(s) 1132
SduI GDGCHC 2 cut(s) 871, 1375
SexAI ACCWGGT 1 cut(s) 1449
SfaNI GCATC 4 cut(s) 136, 211, 309, 454
SfcI CTRYAG 2 cut(s) 828, 1128
SfuI TTCGAA 1 cut(s) 700
SinI GGWCC 3 cut(s) 994, 1453, 1708
SmiMI CAYNNNNRTG 2 cut(s) 1008, 1794
SmlI CTYRAG 2 cut(s) 284, 1043
SmoI CTYRAG 2 cut(s) 284, 1043
Sse8387I CCTGCAGG 1 cut(s) 1132
SsiI CCGC 1 cut(s) 1863
SspMI CTAG 4 cut(s) 1271, 1604, 1667, 1960
StyD4I CCNGG 6 cut(s) 225, 547, 555, 1062, 1449, 1830
TaaI ACNGT 4 cut(s) 161, 850, 1395, 1461
TaiI ACGT 2 cut(s) 388, 448
TaqI TCGA 4 cut(s) 525, 700, 1758, 1935
TatI WGTACW 2 cut(s) 733, 1395
TfiI GAWTC 1 cut(s) 1039
TscAI CASTG 1 cut(s) 1433
TseFI GTSAC 5 cut(s) 16, 42, 161, 386, 446
TseI GCWGC 4 cut(s) 335, 482, 560, 656
Tsp45I GTSAC 5 cut(s) 16, 42, 161, 386, 446
TspDTI ATGAA 8 cut(s) 121, 123, 342, 551, 1092, 1313, 1785, 1895
TspRI CASTG 1 cut(s) 1433
Van91I CCANNNNNTGG 2 cut(s) 1063, 1799
Vha464I CTTAAG 1 cut(s) 284
VneI GTGCAC 1 cut(s) 867
VpaK11BI GGWCC 3 cut(s) 994, 1453, 1708
VspI ATTAAT 1 cut(s) 1775
XapI RAATTY 7 cut(s) 233, 649, 951, 1379, 1519, 1724, 1751
XbaI TCTAGA 1 cut(s) 1666
XmiI GTMKAC 1 cut(s) 1875
XmnI GAANNNNTTC 3 cut(s) 696, 1383, 1626
XspI CTAG 4 cut(s) 1271, 1604, 1667, 1960
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.