Rh7BG261600

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
23908939 .. 23912409
3471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG261600.1

Sequence Viewer

Length: 2640 bp
ATGGAAGATGCCCTTGATAAATTCAGGCTTTTCCATTCACACGATCACGGTCATGGATTCCGAGCTTCCCTTCATAAGCTTTCTTGTATCATCAAGAAATGGAAAGCTAAGCATCAAATTTCTGCTGATATTCAAAGAATAAACTCAAAAGTCAAAAACCTCTACGAGGGACATGAGAGATACAAACTTGTTGACCAAGCTGGCTCCAACTCTGCTCGTCTGGTTCAGCACCACAAGTTTGATCAAGGGGATGCCCTTTTACTGGAAGAGGCTGATCTTGTGGCCATTGGCGAGCGCAAAAAGCAACTGATTGAGTTGCTTATGAAGGAAGACACTGGACGCCAGGTGGTTCCAGTAGTTGGGATGGGTGGACTGGGGAAAACTACCTTGGTAAAGCAAGTCTACGAGGATCCAAAAGTTCAGAAACGTTTCAAGGTACATGCTTGGATCACTGTTTCTCAATCATTCAAGACAAGTCAGCTCCTAAGACACATGATCAATAATATCTTCAAAGTTATCCAGAAACCGGTTCCTGAAGATGAAGAAGTTGAAACCATGGATAACAATCAGCTAAGAGAGAGAATCAAAAAATTGCTGCAGAATAGTAGGTACCTGATTGTTCTTGATGGTATATGGCATATATCGGACTGGGATGCCATCAATCATGTAATGCCGAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTTGCTATGTTAATGTAGCCTCTGCCTCTTGCTTGGGGAACCATGACATGCTCTACCATTTAGAGCCCTTATCTCCAGAGGATTCTTGGACTCTTTTCTGTAAGAAGACATTTCATGGAGAGTCATGCCCACCAAATTTGGAGGAAATTTGTCGATCCATCCTGCTGAAATGCAGGGGACTGCCCCTTGCAATTGTGGCCATCAGCTCTGTACTAGCTTTAAAAGACAAGAGAAATGTGGATGAATGGGCTGCTGTTTCTGGAAGCATTGGAGCTGAAATTGAAGGAAATGATCAACTTTACAACCTGAAAAAATTTCTGTATCTCAGTTACAGTGATTTACCATACCATCTGAAATCTTGTTTCTTATATCTGAGCATCTTTCCTGATCTCTACAAAATTGAGCATATGAAATTAATTCGGTTATGGTTAGCTGAAGGATTTGTTATTGGAAAAGAGGGAAGGACACCAGAAGAAGCTGCAGAGAGTTACCTCAGAGAGTTATTGGACAGAAGTTTGATTCAAGCAGCAGAAACATCAACTGATGGGAGAGTTAAATCATATCGCATCCATGATCTTTTAAGGGAGATTGTCATTTTGAAGTCTAAAGAGCAAAACTTTGCAGCAATAGAAAAAGATCAAGGTACAATGTGGCCTGATGAGAAAGTTCGAAGACTATCAATAGTCAACACGCTGCAGAATATACATCAAAAGAGGACACCATCCCGACTTCGTTCTTTGCTCGTTTTTGGGGTAGAAGATTCACTTACTGATTTTCCCATACCAAAATTGTTTCCTACCGGTCTTCAGTTGCTTACTCTATTAGACTTAGAAGGTGCACATCTGGAAATGTTTCCAATTGAGGTTGTCAAGCTTCTTCTTCTCAAGTACCTTAGCTTGAGGCATACAAAGGTAAAACAAATTCCAAGCTCCATCAAGAAGCTACAAAACCTAGAGACCTTGGACCTTAAACATTCGCATGTTGTTGAATTACCTGATGAGATTTTGAATCTCAAGCGACTTCGTCATCTCCTGGTTTATCGTTATGAGGTTGAGTCATATGCCCGATTTAATGCCAGAAAAGGAGTTAAGATTCCGGCAGGGATAAGTAGCTTGCAATCGCTCCAAAAGCTCTGCTTTATAGAGGCAAATCAATACAGTGGTGCTTTAATGGCAGAGCTTGGGAGAATGAACCAACTAAGGAGGTTAGGCATTTATAAGTTGAGAGAAGAAGATGGGGCCATCTTATGCTCATCCGTCCAAAATATGACCAGCCTTCGCTCGTTGTCTGTATTTTCAGCAGAGAAAGAGAAGATAATTGATCTTAGCCACATTTCTCGTGCTCCTCCATTTCTTCAGCGACTATACTTGGCAGGGCGTTTAGAAAACTTACCCCACTGGATTTCTTCTCTTCAAAACCTGGTCAGACTGTTTCTAAAATGGAGTCGGCTGAAGGAGGATCCTCTAGTACATCTTCGGGGTTTGCCAAACCTGGTACATCTTGAACTTTTACAAGTTTATGATGGAGAAAGCTTGCACTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATTGGTAACCATAGAGGAGGGAGCAATGCCTTCTCTAGAAAAGCTAATTATCCAGCGCTGCAAATGCTTGAAGAAGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAGTTTTTCGATATGCCAGATGAATTAATCATGCCACTACATCCAGATGGTGGAGAAGATCACTGGAAAGTCGCTCATGTTCCAGCAGTTTATTATTCATATTGGAGAGGTGGGGGTTGGGACGTCTATTCACTATTCAATGATGTAAAGAGTTTTAATTCGGGTACTTCTGCAGTGAGGAGGCTCGAACCTAATATTCTAGGGAAGGTGTAG

Protein Analysis

879

Amino Acids

100.71

Weight (kDa)

8.74

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 99 - 278 2.4e-42 NB-ARC domain
nSTAND6 PF25201 102 - 192 7.3e-06 Novel STAND NTPase 6
WHD_DRP PF23559 363 - 434 4.2e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 480 - 809 4e-47 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1926
AatII GACGTC 1 cut(s) 2553
Acc65I GGTACC 1 cut(s) 609
AccB1I GGYRCC 1 cut(s) 609
AccB7I CCANNNNNTGG 2 cut(s) 359, 2477
AccI GTMKAC 1 cut(s) 402
AclI AACGTT 1 cut(s) 427
AclWI GGATC 6 cut(s) 404, 417, 455, 858, 2162, 2175
AcoI YGGCCR 2 cut(s) 282, 906
AcsI RAATTY 6 cut(s) 20, 117, 844, 855, 1022, 1629
AcuI CTGAAG 6 cut(s) 555, 1164, 1499, 2048, 2180, 2294
AcyI GRCGYC 2 cut(s) 340, 2550
AfaI GTAC 8 cut(s) 438, 611, 921, 1354, 1598, 2178, 2205, 2593
AfeI AGCGCT 1 cut(s) 2366
AfiI CCNNNNNNNGG 5 cut(s) 166, 262, 359, 526, 2477
AgeI ACCGGT 2 cut(s) 526, 1508
AjnI CCWGG 4 cut(s) 342, 1740, 2127, 2199
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
Alw21I GWGCWC 2 cut(s) 1549, 2053
Alw26I GTCTC 1 cut(s) 1658
Alw44I GTGCAC 1 cut(s) 1545
AlwI GGATC 6 cut(s) 404, 417, 455, 858, 2162, 2175
Aor51HI AGCGCT 1 cut(s) 2366
AoxI GGCC 4 cut(s) 282, 906, 1361, 1947
ApaLI GTGCAC 1 cut(s) 1545
ApeKI GCWGC 8 cut(s) 595, 959, 1187, 1235, 1331, 1402, 2367, 2422
ApoI RAATTY 6 cut(s) 20, 117, 844, 855, 1022, 1629
AseI ATTAAT 2 cut(s) 1124, 2453
AsiGI ACCGGT 2 cut(s) 526, 1508
Asp700I GAANNNNTTC 2 cut(s) 428, 1560
Asp718I GGTACC 1 cut(s) 609
AspLEI GCGC 2 cut(s) 297, 2367
AspS9I GGNCC 3 cut(s) 1672, 1947, 2386
AsuII TTCGAA 1 cut(s) 1378
AvaII GGWCC 2 cut(s) 1672, 2386
BaeGI GKGCMC 1 cut(s) 1549
BalI TGGCCA 2 cut(s) 284, 908
BamHI GGATCC 2 cut(s) 409, 2167
BanI GGYRCC 1 cut(s) 609
BanII GRGCYC 1 cut(s) 777
BauI CACGAG 1 cut(s) 2046
BbsI GAAGAC 4 cut(s) 336, 821, 1387, 1505
Bbv12I GWGCWC 2 cut(s) 1549, 2053
BbvI GCAGC 8 cut(s) 582, 946, 1174, 1247, 1343, 1389, 2354, 2409
BciT130I CCWGG 4 cut(s) 344, 1742, 2129, 2201
BclI TGATCA 3 cut(s) 241, 495, 1000
BcoDI GTCTC 1 cut(s) 1658
BfaI CTAG 5 cut(s) 923, 1661, 2174, 2345, 2627
BfmI CTRYAG 4 cut(s) 596, 1188, 1403, 2598
BfoI RGCGCY 1 cut(s) 2368
BisI GCNGC 8 cut(s) 596, 960, 1188, 1236, 1332, 1403, 2368, 2423
BlpI GCTNAGC 1 cut(s) 108
BlsI GCNGC 8 cut(s) 597, 961, 1189, 1237, 1333, 1404, 2369, 2424
Bme1390I CCNGG 4 cut(s) 344, 1742, 2129, 2201
Bme18I GGWCC 2 cut(s) 1672, 2386
BmgT120I GGNCC 3 cut(s) 1672, 1947, 2386
BmiI GGNNCC 9 cut(s) 205, 351, 411, 531, 611, 749, 1948, 2169, 2388
BmrFI CCNGG 4 cut(s) 344, 1742, 2129, 2201
BmrI ACTGGG 2 cut(s) 383, 658
BmsI GCATC 5 cut(s) 121, 241, 643, 1095, 1284
BmuI ACTGGG 2 cut(s) 383, 658
BpiI GAAGAC 4 cut(s) 336, 821, 1387, 1505
BplI GAGNNNNNCTC 2 cut(s) 687, 719
BpmI CTGGAG 1 cut(s) 768
Bpu10I CCTNAGC 1 cut(s) 1601
Bpu1102I GCTNAGC 1 cut(s) 108
Bpu14I TTCGAA 1 cut(s) 1378
BpuEI CTTGAG 4 cut(s) 1577, 1627, 1706, 2447
BsaBI GATNNNNATC 1 cut(s) 564
BsaHI GRCGYC 2 cut(s) 340, 2550
BsaI GGTCTC 1 cut(s) 1658
BsaJI CCNNGG 3 cut(s) 387, 555, 1668
BsaWI WCCGGW 2 cut(s) 526, 1508
Bsc4I CCNNNNNNNGG 5 cut(s) 166, 262, 359, 526, 2477
Bse118I RCCGGY 2 cut(s) 526, 1508
Bse1I ACTGG 7 cut(s) 267, 340, 353, 378, 653, 2111, 2495
Bse3DI GCAATG 1 cut(s) 2340
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 4 cut(s) 344, 1742, 2129, 2201
BseDI CCNNGG 3 cut(s) 387, 555, 1668
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 5 cut(s) 166, 262, 359, 526, 2477
BseMI GCAATG 1 cut(s) 2340
BseMII CTCAG 3 cut(s) 1048, 1073, 1216
BseNI ACTGG 7 cut(s) 267, 340, 353, 378, 653, 2111, 2495
BseRI GAGGAG 3 cut(s) 2043, 2339, 2620
BseSI GKGCMC 1 cut(s) 1549
BseXI GCAGC 8 cut(s) 582, 946, 1174, 1247, 1343, 1389, 2354, 2409
BshFI GGCC 4 cut(s) 284, 908, 1363, 1949
BshNI GGYRCC 1 cut(s) 609
BshTI ACCGGT 2 cut(s) 526, 1508
BsiHKAI GWGCWC 2 cut(s) 1549, 2053
BsiSI CCGG 3 cut(s) 527, 1509, 1805
BslFI GGGAC 4 cut(s) 183, 900, 2372, 2561
BslI CCNNNNNNNGG 5 cut(s) 166, 262, 359, 526, 2477
BsmAI GTCTC 1 cut(s) 1658
BsmFI GGGAC 4 cut(s) 183, 900, 2372, 2561
BsnI GGCC 4 cut(s) 284, 908, 1363, 1949
Bso31I GGTCTC 1 cut(s) 1658
Bsp119I TTCGAA 1 cut(s) 1378
Bsp1286I GDGCHC 3 cut(s) 777, 1549, 2053
Bsp1720I GCTNAGC 1 cut(s) 108
Bsp19I CCATGG 1 cut(s) 555
BspANI GGCC 4 cut(s) 284, 908, 1363, 1949
BspCNI CTCAG 3 cut(s) 1047, 1074, 1215
BspLI GGNNCC 9 cut(s) 205, 351, 411, 531, 611, 749, 1948, 2169, 2388
BspMAI CTGCAG 4 cut(s) 600, 1192, 1407, 2602
BspPI GGATC 6 cut(s) 404, 417, 455, 858, 2162, 2175
BspT104I TTCGAA 1 cut(s) 1378
BspT107I GGYRCC 1 cut(s) 609
BspTNI GGTCTC 1 cut(s) 1658
BsrDI GCAATG 1 cut(s) 2340
BsrFI RCCGGY 2 cut(s) 526, 1508
BsrI ACTGG 7 cut(s) 267, 340, 353, 378, 653, 2111, 2495
BssAI RCCGGY 2 cut(s) 526, 1508
BssECI CCNNGG 3 cut(s) 387, 555, 1668
BssNI GRCGYC 2 cut(s) 340, 2550
BssSI CACGAG 1 cut(s) 2046
BssT1I CCWWGG 3 cut(s) 387, 555, 1668
Bst2BI CACGAG 1 cut(s) 2046
Bst2UI CCWGG 4 cut(s) 344, 1742, 2129, 2201
Bst4CI ACNGT 5 cut(s) 50, 454, 1043, 1868, 2139
Bst6I CTCTTC 2 cut(s) 261, 2124
BstACI GRCGYC 2 cut(s) 340, 2550
BstBI TTCGAA 1 cut(s) 1378
BstC8I GCNNGC 4 cut(s) 202, 293, 1823, 2243
BstDSI CCRYGG 1 cut(s) 555
BstEII GGTNACC 1 cut(s) 2314
BstENI CCTNNNNNAGG 1 cut(s) 164
BstH2I RGCGCY 1 cut(s) 2368
BstHHI GCGC 2 cut(s) 297, 2367
BstMAI GTCTC 1 cut(s) 1658
BstMWI GCNNNNNNNGC 5 cut(s) 301, 905, 1837, 1880, 2373
BstNI CCWGG 4 cut(s) 344, 1742, 2129, 2201
BstNSI RCATGY 3 cut(s) 443, 760, 1691
BstPI GGTNACC 1 cut(s) 2314
BstSCI CCNGG 4 cut(s) 342, 1740, 2127, 2199
BstSFI CTRYAG 4 cut(s) 596, 1188, 1403, 2598
BstSLI GKGCMC 1 cut(s) 1549
BstV1I GCAGC 8 cut(s) 582, 946, 1174, 1247, 1343, 1389, 2354, 2409
BstV2I GAAGAC 4 cut(s) 336, 821, 1387, 1505
BstX2I RGATCY 2 cut(s) 409, 2167
BstYI RGATCY 2 cut(s) 409, 2167
BsuRI GGCC 4 cut(s) 284, 908, 1363, 1949
BtgI CCRYGG 1 cut(s) 555
BtsI GCAGTG 1 cut(s) 2607
BtsIMutI CAGTG 7 cut(s) 333, 450, 1048, 1873, 2104, 2488, 2607
Cac8I GCNNGC 4 cut(s) 202, 293, 1823, 2243
CfoI GCGC 2 cut(s) 297, 2367
Cfr10I RCCGGY 2 cut(s) 526, 1508
Cfr13I GGNCC 3 cut(s) 1672, 1947, 2386
CseI GACGC 1 cut(s) 348
CsiI ACCWGGT 2 cut(s) 2127, 2199
Csp6I GTAC 8 cut(s) 437, 610, 920, 1353, 1597, 2177, 2204, 2592
CspAI ACCGGT 2 cut(s) 526, 1508
CspCI CAANNNNNGTGG 4 cut(s) 667, 702, 828, 863
CviQI GTAC 8 cut(s) 437, 610, 920, 1353, 1597, 2177, 2204, 2592
DraI TTTAAA 2 cut(s) 930, 2418
EaeI YGGCCR 2 cut(s) 282, 906
Eam1104I CTCTTC 2 cut(s) 261, 2124
EarI CTCTTC 2 cut(s) 261, 2124
Eco130I CCWWGG 3 cut(s) 387, 555, 1668
Eco24I GRGCYC 1 cut(s) 777
Eco31I GGTCTC 1 cut(s) 1658
Eco47I GGWCC 2 cut(s) 1672, 2386
Eco47III AGCGCT 1 cut(s) 2366
Eco57I CTGAAG 6 cut(s) 555, 1164, 1499, 2048, 2180, 2294
Eco91I GGTNACC 1 cut(s) 2314
EcoNI CCTNNNNNAGG 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 2386
EcoO65I GGTNACC 1 cut(s) 2314
EcoRII CCWGG 4 cut(s) 342, 1740, 2127, 2199
EcoT14I CCWWGG 3 cut(s) 387, 555, 1668
EcoT38I GRGCYC 1 cut(s) 777
ErhI CCWWGG 3 cut(s) 387, 555, 1668
FalI AAGNNNNNCTT 5 cut(s) 29, 1458, 1490, 1829, 1861
FaqI GGGAC 4 cut(s) 183, 900, 2372, 2561
FauNDI CATATG 2 cut(s) 1116, 1768
FbaI TGATCA 3 cut(s) 241, 495, 1000
FblI GTMKAC 1 cut(s) 402
Fnu4HI GCNGC 8 cut(s) 596, 960, 1188, 1236, 1332, 1403, 2368, 2423
FriOI GRGCYC 1 cut(s) 777
Fsp4HI GCNGC 8 cut(s) 596, 960, 1188, 1236, 1332, 1403, 2368, 2423
FspBI CTAG 5 cut(s) 923, 1661, 2174, 2345, 2627
GlaI GCGC 2 cut(s) 296, 2366
GluI GCNGC 8 cut(s) 596, 960, 1188, 1236, 1332, 1403, 2368, 2423
GsuI CTGGAG 1 cut(s) 768
HaeII RGCGCY 1 cut(s) 2368
HaeIII GGCC 4 cut(s) 284, 908, 1363, 1949
HapII CCGG 3 cut(s) 527, 1509, 1805
HgaI GACGC 1 cut(s) 348
HhaI GCGC 2 cut(s) 297, 2367
Hin1I GRCGYC 2 cut(s) 340, 2550
Hin6I GCGC 2 cut(s) 295, 2365
HinP1I GCGC 2 cut(s) 295, 2365
HincII GTYRAC 2 cut(s) 193, 1396
HindII GTYRAC 2 cut(s) 193, 1396
HindIII AAGCTT 3 cut(s) 77, 1580, 2239
HpaII CCGG 3 cut(s) 527, 1509, 1805
Hpy166II GTNNAC 5 cut(s) 193, 371, 403, 1396, 1547
Hpy188I TCNGA 8 cut(s) 62, 423, 646, 1062, 1083, 1205, 2135, 2274
Hpy8I GTNNAC 5 cut(s) 193, 371, 403, 1396, 1547
HpyCH4III ACNGT 5 cut(s) 50, 454, 1043, 1868, 2139
HpyCH4IV ACGT 2 cut(s) 427, 2550
HpyF10VI GCNNNNNNNGC 5 cut(s) 301, 905, 1837, 1880, 2373
HpySE526I ACGT 2 cut(s) 427, 2550
Hsp92I GRCGYC 2 cut(s) 340, 2550
HspAI GCGC 2 cut(s) 295, 2365
KpnI GGTACC 1 cut(s) 613
Ksp22I TGATCA 3 cut(s) 241, 495, 1000
LmnI GCTCC 7 cut(s) 209, 486, 980, 1643, 1836, 2056, 2330
Lsp1109I GCAGC 8 cut(s) 582, 946, 1174, 1247, 1343, 1389, 2354, 2409
LweI GCATC 5 cut(s) 121, 241, 643, 1095, 1284
MabI ACCWGGT 2 cut(s) 2127, 2199
MaeI CTAG 5 cut(s) 923, 1661, 2174, 2345, 2627
MaeII ACGT 2 cut(s) 427, 2550
MaeIII GTNAC 3 cut(s) 1037, 1196, 2314
MfeI CAATTG 3 cut(s) 900, 1566, 2309
MflI RGATCY 2 cut(s) 409, 2167
MhlI GDGCHC 3 cut(s) 777, 1549, 2053
MlsI TGGCCA 2 cut(s) 284, 908
MluNI TGGCCA 2 cut(s) 284, 908
MlyI GAGTC 4 cut(s) 793, 839, 1772, 2161
MmeI TCCRAC 1 cut(s) 231
Mox20I TGGCCA 2 cut(s) 284, 908
MroXI GAANNNNTTC 2 cut(s) 428, 1560
MscI TGGCCA 2 cut(s) 284, 908
MslI CAYNNNNRTG 3 cut(s) 51, 1686, 2472
Msp20I TGGCCA 2 cut(s) 284, 908
MspI CCGG 3 cut(s) 527, 1509, 1805
MspR9I CCNGG 4 cut(s) 344, 1742, 2129, 2201
MunI CAATTG 3 cut(s) 900, 1566, 2309
MvaI CCWGG 4 cut(s) 344, 1742, 2129, 2201
MwoI GCNNNNNNNGC 5 cut(s) 301, 905, 1837, 1880, 2373
NcoI CCATGG 1 cut(s) 555
NdeI CATATG 2 cut(s) 1116, 1768
NlaIV GGNNCC 9 cut(s) 205, 351, 411, 531, 611, 749, 1948, 2169, 2388
NspI RCATGY 3 cut(s) 443, 760, 1691
NspV TTCGAA 1 cut(s) 1378
PcsI WCGNNNNNNNCGW 1 cut(s) 691
PdmI GAANNNNTTC 2 cut(s) 428, 1560
PfeI GAWTC 7 cut(s) 57, 582, 791, 1228, 1469, 1717, 1801
PflFI GACNNNGTC 1 cut(s) 1731
PflMI CCANNNNNTGG 2 cut(s) 359, 2477
PinAI ACCGGT 2 cut(s) 526, 1508
PkrI GCNGC 8 cut(s) 597, 961, 1189, 1237, 1333, 1404, 2369, 2424
PleI GAGTC 4 cut(s) 793, 838, 1771, 2160
PpsI GAGTC 4 cut(s) 793, 838, 1771, 2160
PpuMI RGGWCCY 1 cut(s) 2386
PshBI ATTAAT 2 cut(s) 1124, 2453
PsiI TTATAA 1 cut(s) 1926
Psp1406I AACGTT 1 cut(s) 427
Psp5II RGGWCCY 1 cut(s) 2386
Psp6I CCWGG 4 cut(s) 342, 1740, 2127, 2199
PspEI GGTNACC 1 cut(s) 2314
PspGI CCWGG 4 cut(s) 342, 1740, 2127, 2199
PspN4I GGNNCC 9 cut(s) 205, 351, 411, 531, 611, 749, 1948, 2169, 2388
PspPI GGNCC 3 cut(s) 1672, 1947, 2386
PspPPI RGGWCCY 1 cut(s) 2386
PstI CTGCAG 4 cut(s) 600, 1192, 1407, 2602
PsuI RGATCY 2 cut(s) 409, 2167
PsyI GACNNNGTC 1 cut(s) 1731
RsaI GTAC 8 cut(s) 438, 611, 921, 1354, 1598, 2178, 2205, 2593
RsaNI GTAC 8 cut(s) 437, 610, 920, 1353, 1597, 2177, 2204, 2592
RseI CAYNNNNRTG 3 cut(s) 51, 1686, 2472
SatI GCNGC 8 cut(s) 596, 960, 1188, 1236, 1332, 1403, 2368, 2423
Sau96I GGNCC 3 cut(s) 1672, 1947, 2386
SchI GAGTC 4 cut(s) 793, 839, 1772, 2161
ScrFI CCNGG 4 cut(s) 344, 1742, 2129, 2201
SduI GDGCHC 3 cut(s) 777, 1549, 2053
SexAI ACCWGGT 2 cut(s) 2127, 2199
SfaNI GCATC 5 cut(s) 121, 241, 643, 1095, 1284
SfcI CTRYAG 4 cut(s) 596, 1188, 1403, 2598
SfuI TTCGAA 1 cut(s) 1378
SinI GGWCC 2 cut(s) 1672, 2386
SmiMI CAYNNNNRTG 3 cut(s) 51, 1686, 2472
SmlI CTYRAG 4 cut(s) 1592, 1606, 1721, 2426
SmoI CTYRAG 4 cut(s) 1592, 1606, 1721, 2426
SspI AATATT 1 cut(s) 2623
SspMI CTAG 5 cut(s) 923, 1661, 2174, 2345, 2627
StyD4I CCNGG 4 cut(s) 342, 1740, 2127, 2199
StyI CCWWGG 3 cut(s) 387, 555, 1668
TaaI ACNGT 5 cut(s) 50, 454, 1043, 1868, 2139
TaiI ACGT 2 cut(s) 430, 2553
TaqI TCGA 5 cut(s) 694, 862, 1378, 2436, 2613
TatI WGTACW 2 cut(s) 919, 2176
TfiI GAWTC 7 cut(s) 57, 582, 791, 1228, 1469, 1717, 1801
TscAI CASTG 7 cut(s) 340, 457, 1048, 1873, 2111, 2495, 2607
TseI GCWGC 8 cut(s) 595, 959, 1187, 1235, 1331, 1402, 2367, 2422
TspGWI ACGGA 1 cut(s) 1954
TspRI CASTG 7 cut(s) 340, 457, 1048, 1873, 2111, 2495, 2607
Tth111I GACNNNGTC 1 cut(s) 1731
Van91I CCANNNNNTGG 2 cut(s) 359, 2477
VneI GTGCAC 1 cut(s) 1545
VpaK11BI GGWCC 2 cut(s) 1672, 2386
VspI ATTAAT 2 cut(s) 1124, 2453
XagI CCTNNNNNAGG 1 cut(s) 164
XapI RAATTY 6 cut(s) 20, 117, 844, 855, 1022, 1629
XbaI TCTAGA 1 cut(s) 2344
XceI RCATGY 3 cut(s) 443, 760, 1691
XcmI CCANNNNNNNNNTGG 1 cut(s) 792
XmiI GTMKAC 1 cut(s) 402
XmnI GAANNNNTTC 2 cut(s) 428, 1560
XspI CTAG 5 cut(s) 923, 1661, 2174, 2345, 2627
ZraI GACGTC 1 cut(s) 2551
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.