Rw7G023010

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
27465355 .. 27484638
19284 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G023010.1

Sequence Viewer

Length: 2979 bp
ATGAAAGATCATTCAACAATATCAACTCAAACACCACATACAAAGTTTTCTTTTCTCCTACCACAAATATATTATCTATCCTCAGAAACACAAACAAACCTGCAAGTGCTATCAGGCAAAGAAATGGCAGAAAGTGCAGTCACCTTTTTGGTTAACAAGCTCACGACATTACTCGAAGAAGAGGCGAAACTCTTGTCAGGGATCCGAGAAAAGGTCGAGGGCCTGGTTGCTGAATTGGAGCGCATCAAGGCCTTCTTAAGGGTAGCTGATGCAAAGGAAGTCAGCAATCCTCAACACCAAGTGCGGGTTAAACAAGTCAGAGATGTAGCTCATGAAATGGAAGATGCCCTTGATAAATTCAGGCTTTTCCATTCACACGATCACGGTCATGGATTCCGAGCTTCCCTTCATAAGCTTTCTTGTATCATCAAGAAATGGAAAGCTAAGCATGAAATTTCTGCTGATATTCAAAGAATAAACTCAAAAGTCAAAGACCTCTACGAGGGACATCAGAGATACAAACTTGTTGACCAAGCTGGCTCCAACTCTGCTCCTCTGGTTCACTGCCACAAGTTAGATCAAGGGGATGCCCTTTTACTGGAAGAGGCTGATCTTGTGGCAATTGGCGAGCGCAAAAAGCAACTGATTGAATTGCTTATGAAGGAAGACACTAGACGTCAGGTGGTTCCAGTAGTTGGGATGGGTGGACTGGGGAAAACTACCTTGGTCAAGCAAGTCTACGAGGATCCAAAAGTTCAGAAACGTTTCAAGGTACATGCTTGGATCACTGTTTCTCGATCATTCAAGATAAATCAGCTCCTAAGACACATGATCAATAAAATCTTCAAAGTTATCCAGAAACCAGTTCCTGAAGATGAAGAAGTTGAAACCATGGACGACAACCAGCTAAGAGAGAGAATCAAAAATTTGCTGCAGAATAGTAGGTACCTGATTGTTCTTGATGGTATATGGCACATACTGGACTGGGATGCCATTAATCATGCAATGCCGAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGATATGTTAATGTAGCCTCTGCCTCTTGCTTGGGGAACCATGACATGTTGTACCGTTTAGAGCCCTTATCTCCAGAAGATTCATGGACTCTTTTCTGCAGGAAGACATTTCATGGAGAGTCATGCCCACCAAATTTGGAGGGAATTTGTCGATGCATCCTGATGAAATGCGGGGGACTACCCCTTGCAATTGTGGCCATCAGCGCTGTACTAGCTTTAAAAGGCAAGAGAAATGTGGATGATTGGGCTGCTGTTTGTGGTAGTATTGGAGCTGAAATAGAAGGAAATGATCAACTTGACAACATGGAAAAATTGCTGTCTCTCAGTTACAGGGATTTACCATTCCATCTGAAATCTTGTTTCTTGTATCTGGGCATCTTTCCTGATACCTACAAAATTGAGCATATGAGATTAATTAGATTATGGTTAGCTGAAGGATTTGTTATTGGAAAAGAGGGAAGGACACCAGAAGAAGTTGCAGAGAGTTACCTTAGAGAGTTATTGGACAGAAGTCTGATTCAAGCAGCAGAAACATCAACTGATGGGAGAGTTAAATCATATCGCATCCATGATATTTTACGGGAGATTGTCATTACGAAGTCTAGAGAGCAAAACTTTGCAGCAGTAGCAAAAGAGCAAGGTACAAAGTGGCCTGAGAAAGTTCGAAGACTATCGATAGTTAACACGCTGCAAAATATTCATCAAAAGAGGACAACATCCCGACTTCGTTCTTTGCTCCTTTTTGGGGTAGAAGATTCACTTACTCATTTTCCCACACCAAAATTGTTTCCTATCGGTCTTCAGTTGCTTACTGTATTAGACTTAGAAGGTGCACATCTGGATATGTTTCCAAGTGAGGTTGTCAAGCTTCTTCTTCTCAAGTACCTTAGCTTGAGGCATACAAAGGTGAAACAAATTCCAAGCTCCATCAAAAAGCTACAAAACCTAGAGACCTTGGACCTTAAACACTCGCATGTTGTTGAATTACCTGCTGAGATTTTGAATCTCAAGCGACTTCGTCATCTCTTGGTTTATCGTTATGAGGTTGAGTCATATTTACGATTTAATGCCAGAAAAGGAGTTAAGATTCCGGCAGGGATAAGCAGCTTGCAATCGCTCCAAAAGCTCTGCTTTATAGAGGCAAATCAATACAGTGGTGCTTTAATGGCAGAACTTGGGGGAATGGAGCAACTAAGGAGGTTAGGCATTTATAAGTTGAGAGAAGAAGATGGGGCCACCTTATGCTCATCTGTCCAAAAAATGACCAGCCTTCGCTCGTTGTCTGTATTTTCAGCAGGGAAAGAGAAGATAATTGATCTTAGCCACATTTTTCGCGCTCCTCCATTTCTTCAGCGACTATACTTGGCAGGGCGTTTAGAAAACTTACCCCACTGGATCTCTTCTCTTCAAAACTTGGTCAGACTGTTTCTAAAATGGAGTCGGCTGAAAGAGGATCCTCTAGATCCTCTAGTACATCTTCAGGGTTTGCCAAACCTGGTACATCTTGAACTTCTGCAAGTTTATGATGGAGAAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATCGGTAACCATAGAGAAGGGAGCAATGCCTTGTCTAGAAAAGTTAATTATCCAGCGGTGTAAATTGTTGAAGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAATTTTTCGATATGCCAGATGAATTGATCATGCCACTACATCCAGATGGTGGAGAAGATCATTGGAAAGTTGCTCATGTTCCAGCAGTATATTATTCCTATTGGAGAGGTGGGGGTTGGGACGTCTATTCATTAGTCAATGAAGGGGAGAGTTTTAATTCGGGTACTTCTGCCGAGAGGAGGCTCGAACGTAATATTCTGTGGAAGGTGTAG

Protein Analysis

992

Amino Acids

113.26

Weight (kDa)

8.74

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 46 - 128 3.4e-22 Rx N-terminal domain
NB-ARC PF00931 211 - 390 7.2e-43 NB-ARC domain
nSTAND6 PF25201 213 - 306 3e-06 Novel STAND NTPase 6
WHD_DRP PF23559 475 - 546 9.1e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 591 - 922 7.9e-47 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2259
AatII GACGTC 2 cut(s) 679, 2892
Acc36I ACCTGC 2 cut(s) 108, 2044
Acc65I GGTACC 1 cut(s) 945
AccB1I GGYRCC 1 cut(s) 945
AccB7I CCANNNNNTGG 2 cut(s) 695, 2816
AccI GTMKAC 1 cut(s) 738
AccII CGCG 1 cut(s) 2382
AciI CCGC 3 cut(s) 304, 1218, 2707
AclI AACGTT 1 cut(s) 763
AclWI GGATC 9 cut(s) 196, 209, 740, 753, 791, 2450, 2495, 2504, 2508
AcoI YGGCCR 1 cut(s) 1242
AcsI RAATTY 7 cut(s) 356, 453, 925, 1180, 1191, 1962, 2768
AcuI CTGAAG 6 cut(s) 891, 1500, 1832, 2381, 2510, 2636
AcyI GRCGYC 2 cut(s) 676, 2889
AdeI CACNNNGTG 1 cut(s) 301
AfaI GTAC 9 cut(s) 774, 947, 1100, 1257, 1690, 1931, 2520, 2547, 2932
AfeI AGCGCT 1 cut(s) 1252
AfiI CCNNNNNNNGG 9 cut(s) 211, 258, 304, 502, 598, 695, 1792, 2816, 2946
AflII CTTAAG 1 cut(s) 256
AflIII ACRYGT 1 cut(s) 1092
AjnI CCWGG 2 cut(s) 222, 2541
AjuI GAANNNNNNNTTGG 2 cut(s) 707, 739
Alw21I GWGCWC 1 cut(s) 1882
Alw26I GTCTC 2 cut(s) 1371, 1991
Alw44I GTGCAC 1 cut(s) 1878
AlwI GGATC 9 cut(s) 196, 209, 740, 753, 791, 2450, 2495, 2504, 2508
AlwNI CAGNNNCTG 1 cut(s) 869
Aor51HI AGCGCT 1 cut(s) 1252
AoxI GGCC 5 cut(s) 220, 249, 1242, 1697, 2280
ApaLI GTGCAC 1 cut(s) 1878
ApeKI GCWGC 7 cut(s) 931, 1295, 1571, 1667, 1735, 2151, 2761
ApoI RAATTY 7 cut(s) 356, 453, 925, 1180, 1191, 1962, 2768
ArsI GACNNNNNNTTYG 2 cut(s) 179, 211
AseI ATTAAT 2 cut(s) 996, 1460
Asp700I GAANNNNTTC 1 cut(s) 764
Asp718I GGTACC 1 cut(s) 945
AspLEI GCGC 4 cut(s) 243, 633, 1253, 2384
AspS9I GGNCC 4 cut(s) 220, 2005, 2280, 2725
AsuHPI GGTGA 2 cut(s) 133, 1966
AsuII TTCGAA 1 cut(s) 1711
AvaII GGWCC 2 cut(s) 2005, 2725
BaeGI GKGCMC 1 cut(s) 1882
BalI TGGCCA 1 cut(s) 1244
BamHI GGATCC 3 cut(s) 201, 745, 2500
BanI GGYRCC 1 cut(s) 945
BanII GRGCYC 1 cut(s) 1113
BbsI GAAGAC 4 cut(s) 672, 1157, 1720, 1838
Bbv12I GWGCWC 1 cut(s) 1882
BbvI GCAGC 7 cut(s) 918, 1282, 1583, 1679, 1722, 2163, 2748
BciT130I CCWGG 2 cut(s) 224, 2543
BclI TGATCA 3 cut(s) 831, 1336, 2793
BcoDI GTCTC 2 cut(s) 1371, 1991
BfaI CTAG 7 cut(s) 672, 1259, 1650, 1994, 2507, 2516, 2687
BfmI CTRYAG 2 cut(s) 932, 1144
BfoI RGCGCY 1 cut(s) 1254
BfrI CTTAAG 1 cut(s) 256
BfuAI ACCTGC 2 cut(s) 108, 2044
BisI GCNGC 7 cut(s) 932, 1296, 1572, 1668, 1736, 2152, 2762
BlpI GCTNAGC 1 cut(s) 444
BlsI GCNGC 7 cut(s) 933, 1297, 1573, 1669, 1737, 2153, 2763
Bme1390I CCNGG 2 cut(s) 224, 2543
Bme18I GGWCC 2 cut(s) 2005, 2725
BmgT120I GGNCC 4 cut(s) 220, 2005, 2280, 2725
BmiI GGNNCC 9 cut(s) 203, 541, 687, 747, 947, 1085, 2281, 2502, 2727
BmrFI CCNGG 2 cut(s) 224, 2543
BmrI ACTGGG 2 cut(s) 719, 994
BmsI GCATC 9 cut(s) 252, 259, 334, 577, 979, 1190, 1212, 1431, 1620
BmuI ACTGGG 2 cut(s) 719, 994
BoxI GACNNNNGTC 1 cut(s) 1557
BpiI GAAGAC 4 cut(s) 672, 1157, 1720, 1838
BplI GAGNNNNNCTC 2 cut(s) 1023, 1055
BpmI CTGGAG 1 cut(s) 1104
Bpu10I CCTNAGC 1 cut(s) 1934
Bpu1102I GCTNAGC 1 cut(s) 444
Bpu14I TTCGAA 1 cut(s) 1711
BpuEI CTTGAG 3 cut(s) 1910, 1960, 2039
Bsa29I ATCGAT 1 cut(s) 1721
BsaHI GRCGYC 2 cut(s) 676, 2889
BsaI GGTCTC 1 cut(s) 1991
BsaJI CCNNGG 3 cut(s) 723, 891, 2001
Bsc4I CCNNNNNNNGG 9 cut(s) 211, 258, 304, 502, 598, 695, 1792, 2816, 2946
Bse1I ACTGG 7 cut(s) 603, 689, 714, 863, 984, 989, 2444
Bse3DI GCAATG 2 cut(s) 1011, 2682
BseBI CCWGG 2 cut(s) 224, 2543
BseCI ATCGAT 1 cut(s) 1721
BseDI CCNNGG 3 cut(s) 723, 891, 2001
BseGI GGATG 9 cut(s) 592, 705, 994, 1203, 1291, 1611, 1763, 2647, 2806
BseLI CCNNNNNNNGG 9 cut(s) 211, 258, 304, 502, 598, 695, 1792, 2816, 2946
BseMI GCAATG 2 cut(s) 1011, 2682
BseMII CTCAG 4 cut(s) 96, 1384, 1692, 2031
BseNI ACTGG 7 cut(s) 603, 689, 714, 863, 984, 989, 2444
BseRI GAGGAG 3 cut(s) 543, 2376, 2959
BseSI GKGCMC 1 cut(s) 1882
BseXI GCAGC 7 cut(s) 918, 1282, 1583, 1679, 1722, 2163, 2748
BsgI GTGCAG 1 cut(s) 156
Bsh1236I CGCG 1 cut(s) 2382
BshFI GGCC 5 cut(s) 222, 251, 1244, 1699, 2282
BshNI GGYRCC 1 cut(s) 945
BshVI ATCGAT 1 cut(s) 1721
BsiHKAI GWGCWC 1 cut(s) 1882
BsiSI CCGG 1 cut(s) 2138
BslFI GGGAC 4 cut(s) 519, 1236, 2711, 2900
BslI CCNNNNNNNGG 9 cut(s) 211, 258, 304, 502, 598, 695, 1792, 2816, 2946
BsmAI GTCTC 2 cut(s) 1371, 1991
BsmFI GGGAC 4 cut(s) 519, 1236, 2711, 2900
BsnI GGCC 5 cut(s) 222, 251, 1244, 1699, 2282
Bso31I GGTCTC 1 cut(s) 1991
Bsp119I TTCGAA 1 cut(s) 1711
Bsp1286I GDGCHC 2 cut(s) 1113, 1882
Bsp1720I GCTNAGC 1 cut(s) 444
Bsp19I CCATGG 1 cut(s) 891
BspACI CCGC 3 cut(s) 304, 1218, 2707
BspANI GGCC 5 cut(s) 222, 251, 1244, 1699, 2282
BspCNI CTCAG 4 cut(s) 95, 1383, 1693, 2032
BspDI ATCGAT 1 cut(s) 1721
BspFNI CGCG 1 cut(s) 2382
BspHI TCATGA 1 cut(s) 331
BspLI GGNNCC 9 cut(s) 203, 541, 687, 747, 947, 1085, 2281, 2502, 2727
BspMAI CTGCAG 2 cut(s) 936, 1148
BspMI ACCTGC 2 cut(s) 108, 2044
BspPI GGATC 9 cut(s) 196, 209, 740, 753, 791, 2450, 2495, 2504, 2508
BspT104I TTCGAA 1 cut(s) 1711
BspT107I GGYRCC 1 cut(s) 945
BspTI CTTAAG 1 cut(s) 256
BspTNI GGTCTC 1 cut(s) 1991
BsrDI GCAATG 2 cut(s) 1011, 2682
BsrI ACTGG 7 cut(s) 603, 689, 714, 863, 984, 989, 2444
BssECI CCNNGG 3 cut(s) 723, 891, 2001
BssNI GRCGYC 2 cut(s) 676, 2889
BssT1I CCWWGG 3 cut(s) 723, 891, 2001
Bst2UI CCWGG 2 cut(s) 224, 2543
Bst4CI ACNGT 6 cut(s) 386, 790, 1103, 1861, 2201, 2472
Bst6I CTCTTC 4 cut(s) 174, 597, 2452, 2457
BstACI GRCGYC 2 cut(s) 676, 2889
BstAFI CTTAAG 1 cut(s) 256
BstAPI GCANNNNNTGC 1 cut(s) 134
BstBI TTCGAA 1 cut(s) 1711
BstC8I GCNNGC 4 cut(s) 538, 629, 2156, 2585
BstDSI CCRYGG 1 cut(s) 891
BstEII GGTNACC 1 cut(s) 2656
BstENI CCTNNNNNAGG 2 cut(s) 256, 500
BstF5I GGATG 9 cut(s) 592, 705, 994, 1203, 1291, 1611, 1763, 2647, 2806
BstFNI CGCG 1 cut(s) 2382
BstH2I RGCGCY 1 cut(s) 1254
BstHHI GCGC 4 cut(s) 243, 633, 1253, 2384
BstMAI GTCTC 2 cut(s) 1371, 1991
BstMWI GCNNNNNNNGC 8 cut(s) 134, 637, 1241, 1250, 1259, 1673, 2170, 2213
BstNI CCWGG 2 cut(s) 224, 2543
BstNSI RCATGY 3 cut(s) 779, 1096, 2024
BstPAI GACNNNNGTC 1 cut(s) 1557
BstPI GGTNACC 1 cut(s) 2656
BstSCI CCNGG 2 cut(s) 222, 2541
BstSFI CTRYAG 2 cut(s) 932, 1144
BstSLI GKGCMC 1 cut(s) 1882
BstUI CGCG 1 cut(s) 2382
BstV1I GCAGC 7 cut(s) 918, 1282, 1583, 1679, 1722, 2163, 2748
BstV2I GAAGAC 4 cut(s) 672, 1157, 1720, 1838
BstX2I RGATCY 5 cut(s) 201, 745, 2442, 2500, 2509
BstYI RGATCY 5 cut(s) 201, 745, 2442, 2500, 2509
Bsu15I ATCGAT 1 cut(s) 1721
BsuRI GGCC 5 cut(s) 222, 251, 1244, 1699, 2282
BsuTUI ATCGAT 1 cut(s) 1721
BtgI CCRYGG 1 cut(s) 891
BtsCI GGATG 9 cut(s) 592, 705, 994, 1203, 1291, 1611, 1763, 2647, 2806
BtsI GCAGTG 1 cut(s) 562
BtsIMutI CAGTG 4 cut(s) 562, 786, 2206, 2437
BveI ACCTGC 2 cut(s) 108, 2044
Cac8I GCNNGC 4 cut(s) 538, 629, 2156, 2585
CaiI CAGNNNCTG 1 cut(s) 869
CciI TCATGA 1 cut(s) 331
CfoI GCGC 4 cut(s) 243, 633, 1253, 2384
Cfr13I GGNCC 4 cut(s) 220, 2005, 2280, 2725
ClaI ATCGAT 1 cut(s) 1721
CsiI ACCWGGT 1 cut(s) 2541
Csp6I GTAC 9 cut(s) 773, 946, 1099, 1256, 1689, 1930, 2519, 2546, 2931
CspCI CAANNNNNGTGG 4 cut(s) 1003, 1038, 1164, 1199
CviQI GTAC 9 cut(s) 773, 946, 1099, 1256, 1689, 1930, 2519, 2546, 2931
DraI TTTAAA 2 cut(s) 1266, 2757
DraIII CACNNNGTG 1 cut(s) 301
EaeI YGGCCR 1 cut(s) 1242
Eam1104I CTCTTC 4 cut(s) 174, 597, 2452, 2457
EarI CTCTTC 4 cut(s) 174, 597, 2452, 2457
Eco130I CCWWGG 3 cut(s) 723, 891, 2001
Eco147I AGGCCT 1 cut(s) 251
Eco24I GRGCYC 1 cut(s) 1113
Eco31I GGTCTC 1 cut(s) 1991
Eco47I GGWCC 2 cut(s) 2005, 2725
Eco47III AGCGCT 1 cut(s) 1252
Eco57I CTGAAG 6 cut(s) 891, 1500, 1832, 2381, 2510, 2636
Eco91I GGTNACC 1 cut(s) 2656
EcoNI CCTNNNNNAGG 2 cut(s) 256, 500
EcoO109I RGGNCCY 2 cut(s) 220, 2725
EcoO65I GGTNACC 1 cut(s) 2656
EcoRII CCWGG 2 cut(s) 222, 2541
EcoT14I CCWWGG 3 cut(s) 723, 891, 2001
EcoT22I ATGCAT 1 cut(s) 1205
EcoT38I GRGCYC 1 cut(s) 1113
ErhI CCWWGG 3 cut(s) 723, 891, 2001
FalI AAGNNNNNCTT 8 cut(s) 239, 271, 333, 365, 1791, 1823, 2162, 2194
FaqI GGGAC 4 cut(s) 519, 1236, 2711, 2900
FauI CCCGC 2 cut(s) 297, 1211
FauNDI CATATG 1 cut(s) 1452
FbaI TGATCA 3 cut(s) 831, 1336, 2793
FblI GTMKAC 1 cut(s) 738
Fnu4HI GCNGC 7 cut(s) 932, 1296, 1572, 1668, 1736, 2152, 2762
FokI GGATG 9 cut(s) 599, 712, 1001, 1190, 1298, 1598, 1750, 2654, 2793
FriOI GRGCYC 1 cut(s) 1113
Fsp4HI GCNGC 7 cut(s) 932, 1296, 1572, 1668, 1736, 2152, 2762
FspBI CTAG 7 cut(s) 672, 1259, 1650, 1994, 2507, 2516, 2687
GlaI GCGC 4 cut(s) 242, 632, 1252, 2383
GluI GCNGC 7 cut(s) 932, 1296, 1572, 1668, 1736, 2152, 2762
GsuI CTGGAG 1 cut(s) 1104
HaeII RGCGCY 1 cut(s) 1254
HaeIII GGCC 5 cut(s) 222, 251, 1244, 1699, 2282
HapII CCGG 1 cut(s) 2138
HhaI GCGC 4 cut(s) 243, 633, 1253, 2384
Hin1I GRCGYC 2 cut(s) 676, 2889
Hin6I GCGC 4 cut(s) 241, 631, 1251, 2382
HinP1I GCGC 4 cut(s) 241, 631, 1251, 2382
HincII GTYRAC 3 cut(s) 154, 529, 1729
HindII GTYRAC 3 cut(s) 154, 529, 1729
HindIII AAGCTT 3 cut(s) 413, 1913, 2581
HpaI GTTAAC 2 cut(s) 154, 1729
HpaII CCGG 1 cut(s) 2138
HphI GGTGA 2 cut(s) 133, 1966
Hpy166II GTNNAC 7 cut(s) 154, 529, 562, 707, 739, 1729, 1880
Hpy8I GTNNAC 7 cut(s) 154, 529, 562, 707, 739, 1729, 1880
HpyCH4III ACNGT 6 cut(s) 386, 790, 1103, 1861, 2201, 2472
HpyCH4IV ACGT 4 cut(s) 676, 763, 2889, 2956
HpyF10VI GCNNNNNNNGC 8 cut(s) 134, 637, 1241, 1250, 1259, 1673, 2170, 2213
HpySE526I ACGT 4 cut(s) 676, 763, 2889, 2956
Hsp92I GRCGYC 2 cut(s) 676, 2889
HspAI GCGC 4 cut(s) 241, 631, 1251, 2382
KpnI GGTACC 1 cut(s) 949
Ksp22I TGATCA 3 cut(s) 831, 1336, 2793
KspAI GTTAAC 2 cut(s) 154, 1729
Lsp1109I GCAGC 7 cut(s) 918, 1282, 1583, 1679, 1722, 2163, 2748
LweI GCATC 9 cut(s) 252, 259, 334, 577, 979, 1190, 1212, 1431, 1620
MabI ACCWGGT 1 cut(s) 2541
MaeI CTAG 7 cut(s) 672, 1259, 1650, 1994, 2507, 2516, 2687
MaeII ACGT 4 cut(s) 676, 763, 2889, 2956
MaeIII GTNAC 4 cut(s) 139, 1373, 1532, 2656
MfeI CAATTG 2 cut(s) 621, 1236
MflI RGATCY 5 cut(s) 201, 745, 2442, 2500, 2509
MhlI GDGCHC 2 cut(s) 1113, 1882
MlsI TGGCCA 1 cut(s) 1244
MluNI TGGCCA 1 cut(s) 1244
MlyI GAGTC 4 cut(s) 1129, 1175, 2105, 2494
MmeI TCCRAC 1 cut(s) 567
Mox20I TGGCCA 1 cut(s) 1244
Mph1103I ATGCAT 1 cut(s) 1205
MroXI GAANNNNTTC 1 cut(s) 764
MscI TGGCCA 1 cut(s) 1244
MslI CAYNNNNRTG 4 cut(s) 387, 1208, 2019, 2811
Msp20I TGGCCA 1 cut(s) 1244
MspA1I CMGCKG 1 cut(s) 2707
MspCI CTTAAG 1 cut(s) 256
MspI CCGG 1 cut(s) 2138
MspR9I CCNGG 2 cut(s) 224, 2543
MunI CAATTG 2 cut(s) 621, 1236
MvaI CCWGG 2 cut(s) 224, 2543
MvnI CGCG 1 cut(s) 2382
MwoI GCNNNNNNNGC 8 cut(s) 134, 637, 1241, 1250, 1259, 1673, 2170, 2213
NcoI CCATGG 1 cut(s) 891
NdeI CATATG 1 cut(s) 1452
NlaIV GGNNCC 9 cut(s) 203, 541, 687, 747, 947, 1085, 2281, 2502, 2727
NmeAIII GCCGAG 1 cut(s) 2965
NmuCI GTSAC 1 cut(s) 139
NsiI ATGCAT 1 cut(s) 1205
NspI RCATGY 3 cut(s) 779, 1096, 2024
NspV TTCGAA 1 cut(s) 1711
PagI TCATGA 1 cut(s) 331
PceI AGGCCT 1 cut(s) 251
PciI ACATGT 1 cut(s) 1092
PcsI WCGNNNNNNNCGW 1 cut(s) 1027
PdmI GAANNNNTTC 1 cut(s) 764
PfeI GAWTC 7 cut(s) 393, 918, 1127, 1564, 1802, 2050, 2134
PflFI GACNNNGTC 1 cut(s) 2064
PflMI CCANNNNNTGG 2 cut(s) 695, 2816
PkrI GCNGC 7 cut(s) 933, 1297, 1573, 1669, 1737, 2153, 2763
PleI GAGTC 4 cut(s) 1129, 1174, 2104, 2493
PpsI GAGTC 4 cut(s) 1129, 1174, 2104, 2493
PpuMI RGGWCCY 1 cut(s) 2725
PscI ACATGT 1 cut(s) 1092
PshAI GACNNNNGTC 1 cut(s) 1557
PshBI ATTAAT 2 cut(s) 996, 1460
PsiI TTATAA 1 cut(s) 2259
Psp1406I AACGTT 1 cut(s) 763
Psp5II RGGWCCY 1 cut(s) 2725
Psp6I CCWGG 2 cut(s) 222, 2541
PspEI GGTNACC 1 cut(s) 2656
PspGI CCWGG 2 cut(s) 222, 2541
PspN4I GGNNCC 9 cut(s) 203, 541, 687, 747, 947, 1085, 2281, 2502, 2727
PspPI GGNCC 4 cut(s) 220, 2005, 2280, 2725
PspPPI RGGWCCY 1 cut(s) 2725
PstI CTGCAG 2 cut(s) 936, 1148
PstNI CAGNNNCTG 1 cut(s) 869
PsuI RGATCY 5 cut(s) 201, 745, 2442, 2500, 2509
PsyI GACNNNGTC 1 cut(s) 2064
RsaI GTAC 9 cut(s) 774, 947, 1100, 1257, 1690, 1931, 2520, 2547, 2932
RsaNI GTAC 9 cut(s) 773, 946, 1099, 1256, 1689, 1930, 2519, 2546, 2931
RseI CAYNNNNRTG 4 cut(s) 387, 1208, 2019, 2811
SatI GCNGC 7 cut(s) 932, 1296, 1572, 1668, 1736, 2152, 2762
Sau96I GGNCC 4 cut(s) 220, 2005, 2280, 2725
SchI GAGTC 4 cut(s) 1129, 1175, 2105, 2494
ScrFI CCNGG 2 cut(s) 224, 2543
SduI GDGCHC 2 cut(s) 1113, 1882
SexAI ACCWGGT 1 cut(s) 2541
SfaNI GCATC 9 cut(s) 252, 259, 334, 577, 979, 1190, 1212, 1431, 1620
SfcI CTRYAG 2 cut(s) 932, 1144
SfuI TTCGAA 1 cut(s) 1711
SinI GGWCC 2 cut(s) 2005, 2725
SmiMI CAYNNNNRTG 4 cut(s) 387, 1208, 2019, 2811
SmlI CTYRAG 4 cut(s) 256, 1925, 1939, 2054
SmoI CTYRAG 4 cut(s) 256, 1925, 1939, 2054
SseBI AGGCCT 1 cut(s) 251
SsiI CCGC 3 cut(s) 304, 1218, 2707
SspI AATATT 2 cut(s) 1744, 2962
SspMI CTAG 7 cut(s) 672, 1259, 1650, 1994, 2507, 2516, 2687
StuI AGGCCT 1 cut(s) 251
StyD4I CCNGG 2 cut(s) 222, 2541
StyI CCWWGG 3 cut(s) 723, 891, 2001
TaaI ACNGT 6 cut(s) 386, 790, 1103, 1861, 2201, 2472
TaiI ACGT 4 cut(s) 679, 766, 2892, 2959
TaqII GACCGA 1 cut(s) 1832
TatI WGTACW 2 cut(s) 1255, 2518
TfiI GAWTC 7 cut(s) 393, 918, 1127, 1564, 1802, 2050, 2134
TscAI CASTG 4 cut(s) 569, 793, 2206, 2444
TseFI GTSAC 1 cut(s) 139
TseI GCWGC 7 cut(s) 931, 1295, 1571, 1667, 1735, 2151, 2761
Tsp45I GTSAC 1 cut(s) 139
TspRI CASTG 4 cut(s) 569, 793, 2206, 2444
Tth111I GACNNNGTC 1 cut(s) 2064
Van91I CCANNNNNTGG 2 cut(s) 695, 2816
Vha464I CTTAAG 1 cut(s) 256
VneI GTGCAC 1 cut(s) 1878
VpaK11BI GGWCC 2 cut(s) 2005, 2725
VspI ATTAAT 2 cut(s) 996, 1460
XagI CCTNNNNNAGG 2 cut(s) 256, 500
XapI RAATTY 7 cut(s) 356, 453, 925, 1180, 1191, 1962, 2768
XbaI TCTAGA 3 cut(s) 1649, 2506, 2686
XceI RCATGY 3 cut(s) 779, 1096, 2024
XcmI CCANNNNNNNNNTGG 1 cut(s) 1128
XmiI GTMKAC 1 cut(s) 738
XmnI GAANNNNTTC 1 cut(s) 764
XspI CTAG 7 cut(s) 672, 1259, 1650, 1994, 2507, 2516, 2687
ZraI GACGTC 2 cut(s) 677, 2890
Zsp2I ATGCAT 1 cut(s) 1205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.