Rh7DG275500

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
29642993 .. 29646065
3073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG275500.1

Sequence Viewer

Length: 2313 bp
ATGGCAGAAAGTATAGTCACCTTTTTGGTTGACAGGCTCACGACATTACTAGAAGAAGAGGTGAAACTATTGTCAGGGATCCGAGAACAGGTCGAGGACTTGGTTGATGAATTGGAGCGCATCAAAGCCTTCTTAAGGGTAGCTGATGCAAAGGAAGACAGCAATCCTCAGCTCAAAGTGTGGGTAAAACAAGTCAGAGATGTAGCTCATGAAATGGAGGATGCCCTTGATAAATTCAGGCTTTTCCATTCACACGATCACGGCCATGGATTCCGAGCTTCCCTTCATAAGCTTTCTTGCATCATCAAGAAATGGAAAGCTCGCCATCAAATTTCTGATGATATTCAAAGAATAAACTCAAAAGTGAAAAGCCTCTCCGAGGGACATGAGAGATATACACTCGTTGACCAAGCTGGCTCCAGCTCTGCTCGGCTAGTTCAGCACCACAAATTTGGTCAAGGGGATTCCCTTTTACTGGAAGAGGCTGATCTTGTGGCAATTGGCGAGCGCAAAAAGCAACTGATTGAATTGCTTATGAAGGAAGACACTAGACGCCAGGTGGTTCCAGTAGTTGGGATGGGTGGACTGGGGAAAACTACCTTGGTCAAGCAAGTCTACAAGGATCCAAAAGTTCAGAAACGTTTCAAGGTACATGCTTGGATCACTGTTTCTCGATCATTCAAGATAAGTCAGCTCCTAAGACACATGATCAATAAAATCTTCAAAGTTATCAGGAAACCAGTTCCTGAAGATGAAGAAGTTGAAACCATGGATGACAACCAGCTAAGAAAGACGATTAAAAAGTTGCTGCAGAATAGTAGGTACCTGATTGTTCTGGATGATATATGGCATATACCCGACTGGGAGGCCATCAATCATGCAATGCCAAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGCAATGTTAATGTAGCCTCTGCCTCTTGCTTGGGGAACCATGACATGTTCTACCGTTTAGAGCCCTTATCTCCGGAAGATTCATGGACTCTGTTCTGCAGGAAGACATTTCAAGGGAACTCATGCCTTCCAAATTTGGAGGAAATTTGTCGATCCATCCTAATGAAATGCGGGGGACTGCCCCTTGCAATTGTGGCCATCAGCGCTGTACTAGCCTTAAAAGACAAGAGAAATGTGGATGATTGGGCTGCTGTTTCTGGCAGTGTTCAGTTGCTTACAGTATTAGACTTACAAGGTGCACATCTGGATATGTTTCCAAGAGAGGTTGTCAAGCTTCTTCTTCTCAGGTATCTTAGCTTGAGGCATACAAAGGTGAAACAAATTCCAGGCTCCATCAAGAAGCTACAAAACCTAGAGACCTTGGATCTTAAACACTCGCAAGTTGTTGAATTACCTTCTGAGATTTTGAATCTCAAGCGACTTCGTCATCTCCTGGTGTATCGTTATGAGGTTGAGTCATATGCACGCTTCAATGCCAGAAAAGGAGTTAAGGTCCCTGCAGGAATATGTGGTTTGCAATTGCTCCAAAAGCTTTGCTTTATAGAGGCAAATCAAGACACTGGTGCTTTAATGGCAGAGCTCGGGAGAATGAACCAACTAAGGAGGTTAGGCATTTTCAAGTTAAGAAAAGAAGATGGGGTCACCTTATGTTCGTCCATCCAAAATATGACCAATCTTCGCTCGTTCTCTGTATCTTCAACAGAGAAGGACAAGATAATTGACCTTAGCCACATTTCTCGTGCTCCTCCATTTCTTCAGCGACTATACTTGACAGGTCGTTTAGAAAAGTTACCACACTGGATTTCTTCTCTTCAAAACCTGGTCAGACTGTTTCTAAAATGGAGTCGGTTGAAGGAGGATCCTCTAGTACATCTTCAGGGTTTGCCAAACCTGGTACATCTTGAACTTCTGCAGGTTTATGATGGAGAAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATCGGTAACCATAGAGAAGGGAGCAATGCCTTGTCTAGAAAAGTTAATTATCCAGCGGTGTAAATTGTTGAAGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAATTTTTCGATATGCCAGATGAATTGATCATGCCACTACATCCAGATGGTGGAGAAGATCATTGGAAAGTTGCTCATGTTCCAGCAGTTTATTATTCCTATTGGAGAGGTGGGGGTTGGGACGTCTATTCATTAGTCAATGAAGGGGAGAGTTTTAATTCGGGTACTTCTGCCGAGAGGAGGCTCGAACGTAATATTCTGTGGAAGGTGTAG

Protein Analysis

770

Amino Acids

88.14

Weight (kDa)

8.99

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 2.3e-25 Rx N-terminal domain
NB-ARC PF00931 170 - 349 1.7e-45 NB-ARC domain
LRR_14 PF23598 396 - 700 2.2e-47 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2226
Acc36I ACCTGC 1 cut(s) 1888
Acc65I GGTACC 1 cut(s) 822
AccB1I GGYRCC 1 cut(s) 822
AccB7I CCANNNNNTGG 2 cut(s) 572, 2150
AccI GTMKAC 1 cut(s) 615
AccIII TCCGGA 1 cut(s) 997
AciI CCGC 2 cut(s) 1095, 2041
AclI AACGTT 1 cut(s) 640
AclWI GGATC 9 cut(s) 73, 86, 617, 630, 668, 1071, 1356, 1838, 1851
AcoI YGGCCR 2 cut(s) 262, 1119
AcsI RAATTY 7 cut(s) 233, 330, 449, 1057, 1068, 1305, 2102
AcuI CTGAAG 4 cut(s) 768, 1724, 1844, 1970
AcyI GRCGYC 2 cut(s) 553, 2223
AfaI GTAC 6 cut(s) 651, 824, 1134, 1854, 1881, 2266
AfeI AGCGCT 1 cut(s) 1129
AfiI CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 572, 2150, 2280
AflII CTTAAG 1 cut(s) 133
AflIII ACRYGT 1 cut(s) 969
AjnI CCWGG 5 cut(s) 555, 1309, 1416, 1803, 1875
AjuI GAANNNNNNNTTGG 2 cut(s) 584, 616
Alw21I GWGCWC 3 cut(s) 1225, 1566, 1729
Alw26I GTCTC 1 cut(s) 1334
Alw44I GTGCAC 1 cut(s) 1221
AlwI GGATC 9 cut(s) 73, 86, 617, 630, 668, 1071, 1356, 1838, 1851
AlwNI CAGNNNCTG 1 cut(s) 746
Ama87I CYCGRG 1 cut(s) 1565
Aor13HI TCCGGA 1 cut(s) 997
Aor51HI AGCGCT 1 cut(s) 1129
AoxI GGCC 3 cut(s) 262, 867, 1119
ApaLI GTGCAC 1 cut(s) 1221
ApeKI GCWGC 3 cut(s) 808, 1172, 2095
ApoI RAATTY 7 cut(s) 233, 330, 449, 1057, 1068, 1305, 2102
Asp700I GAANNNNTTC 1 cut(s) 641
Asp718I GGTACC 1 cut(s) 822
AspLEI GCGC 3 cut(s) 120, 510, 1130
AspS9I GGNCC 2 cut(s) 1477, 2059
AsuHPI GGTGA 4 cut(s) 10, 73, 1309, 1618
AvaI CYCGRG 1 cut(s) 1565
AvaII GGWCC 2 cut(s) 1477, 2059
BaeGI GKGCMC 1 cut(s) 1225
BalI TGGCCA 1 cut(s) 1121
BamHI GGATCC 3 cut(s) 78, 622, 1843
BanI GGYRCC 1 cut(s) 822
BanII GRGCYC 2 cut(s) 990, 1566
BauI CACGAG 1 cut(s) 1722
BbsI GAAGAC 3 cut(s) 162, 549, 1034
Bbv12I GWGCWC 3 cut(s) 1225, 1566, 1729
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 3 cut(s) 795, 1159, 2082
BceAI ACGGC 1 cut(s) 277
BciT130I CCWGG 5 cut(s) 557, 1311, 1418, 1805, 1877
BclI TGATCA 2 cut(s) 708, 2127
BcoDI GTCTC 1 cut(s) 1334
BfaI CTAG 7 cut(s) 50, 434, 549, 1136, 1337, 1850, 2021
BfmI CTRYAG 4 cut(s) 809, 1021, 1482, 1895
BfoI RGCGCY 1 cut(s) 1131
BfrI CTTAAG 1 cut(s) 133
BfuAI ACCTGC 1 cut(s) 1888
BisI GCNGC 3 cut(s) 809, 1173, 2096
BlsI GCNGC 3 cut(s) 810, 1174, 2097
Bme1390I CCNGG 5 cut(s) 557, 1311, 1418, 1805, 1877
Bme18I GGWCC 2 cut(s) 1477, 2059
BmeT110I CYCGRG 1 cut(s) 1565
BmgT120I GGNCC 2 cut(s) 1477, 2059
BmrFI CCNGG 5 cut(s) 557, 1311, 1418, 1805, 1877
BmrI ACTGGG 2 cut(s) 596, 871
BmsI GCATC 4 cut(s) 129, 136, 211, 309
BmuI ACTGGG 2 cut(s) 596, 871
BpiI GAAGAC 3 cut(s) 162, 549, 1034
BplI GAGNNNNNCTC 2 cut(s) 900, 932
BpmI CTGGAG 1 cut(s) 403
Bpu10I CCTNAGC 2 cut(s) 168, 1709
BpuEI CTTGAG 2 cut(s) 1303, 1382
BsaHI GRCGYC 2 cut(s) 553, 2223
BsaI GGTCTC 1 cut(s) 1334
BsaJI CCNNGG 5 cut(s) 265, 378, 600, 768, 1344
BsaWI WCCGGW 1 cut(s) 997
BsaXI ACNNNNNCTCC 2 cut(s) 1461, 1491
Bsc4I CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 572, 2150, 2280
Bse1I ACTGG 7 cut(s) 480, 566, 591, 740, 866, 1549, 1787
Bse3DI GCAATG 3 cut(s) 888, 934, 2016
BseAI TCCGGA 1 cut(s) 997
BseBI CCWGG 5 cut(s) 557, 1311, 1418, 1805, 1877
BseDI CCNNGG 5 cut(s) 265, 378, 600, 768, 1344
BseGI GGATG 9 cut(s) 226, 582, 778, 844, 1080, 1168, 1641, 1981, 2140
BseLI CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 572, 2150, 2280
BseMI GCAATG 3 cut(s) 888, 934, 2016
BseMII CTCAG 3 cut(s) 182, 1282, 1374
BseNI ACTGG 7 cut(s) 480, 566, 591, 740, 866, 1549, 1787
BseRI GAGGAG 2 cut(s) 1719, 2293
BseSI GKGCMC 1 cut(s) 1225
BseXI GCAGC 3 cut(s) 795, 1159, 2082
BshFI GGCC 3 cut(s) 264, 869, 1121
BshNI GGYRCC 1 cut(s) 822
BsiHKAI GWGCWC 3 cut(s) 1225, 1566, 1729
BsiHKCI CYCGRG 1 cut(s) 1565
BsiSI CCGG 1 cut(s) 998
BslFI GGGAC 5 cut(s) 396, 1113, 1463, 2045, 2234
BslI CCNNNNNNNGG 7 cut(s) 88, 135, 379, 475, 572, 2150, 2280
BsmAI GTCTC 1 cut(s) 1334
BsmFI GGGAC 5 cut(s) 396, 1113, 1463, 2045, 2234
BsnI GGCC 3 cut(s) 264, 869, 1121
Bso31I GGTCTC 1 cut(s) 1334
BsoBI CYCGRG 1 cut(s) 1565
Bsp1286I GDGCHC 4 cut(s) 990, 1225, 1566, 1729
Bsp13I TCCGGA 1 cut(s) 997
Bsp19I CCATGG 2 cut(s) 265, 768
BspACI CCGC 2 cut(s) 1095, 2041
BspANI GGCC 3 cut(s) 264, 869, 1121
BspCNI CTCAG 3 cut(s) 181, 1281, 1375
BspEI TCCGGA 1 cut(s) 997
BspHI TCATGA 1 cut(s) 208
BspMAI CTGCAG 4 cut(s) 813, 1025, 1486, 1899
BspMI ACCTGC 1 cut(s) 1888
BspPI GGATC 9 cut(s) 73, 86, 617, 630, 668, 1071, 1356, 1838, 1851
BspT107I GGYRCC 1 cut(s) 822
BspTI CTTAAG 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 1334
BsrDI GCAATG 3 cut(s) 888, 934, 2016
BsrI ACTGG 7 cut(s) 480, 566, 591, 740, 866, 1549, 1787
BssECI CCNNGG 5 cut(s) 265, 378, 600, 768, 1344
BssNI GRCGYC 2 cut(s) 553, 2223
BssSI CACGAG 1 cut(s) 1722
BssT1I CCWWGG 4 cut(s) 265, 600, 768, 1344
Bst2BI CACGAG 1 cut(s) 1722
Bst2UI CCWGG 5 cut(s) 557, 1311, 1418, 1805, 1877
Bst4CI ACNGT 4 cut(s) 667, 980, 1204, 1815
Bst6I CTCTTC 3 cut(s) 51, 474, 1800
BstACI GRCGYC 2 cut(s) 553, 2223
BstAFI CTTAAG 1 cut(s) 133
BstC8I GCNNGC 5 cut(s) 322, 415, 506, 1450, 1919
BstDEI CTNAG 8 cut(s) 168, 698, 785, 1268, 1277, 1383, 1583, 1709
BstDSI CCRYGG 2 cut(s) 265, 768
BstEII GGTNACC 2 cut(s) 1624, 1990
BstENI CCTNNNNNAGG 2 cut(s) 133, 377
BstF5I GGATG 9 cut(s) 226, 582, 778, 844, 1080, 1168, 1641, 1981, 2140
BstH2I RGCGCY 1 cut(s) 1131
BstHHI GCGC 3 cut(s) 120, 510, 1130
BstMAI GTCTC 1 cut(s) 1334
BstMWI GCNNNNNNNGC 7 cut(s) 439, 514, 1118, 1127, 1136, 1513, 1556
BstNI CCWGG 5 cut(s) 557, 1311, 1418, 1805, 1877
BstNSI RCATGY 2 cut(s) 656, 973
BstPI GGTNACC 2 cut(s) 1624, 1990
BstSCI CCNGG 5 cut(s) 555, 1309, 1416, 1803, 1875
BstSFI CTRYAG 4 cut(s) 809, 1021, 1482, 1895
BstSLI GKGCMC 1 cut(s) 1225
BstV1I GCAGC 3 cut(s) 795, 1159, 2082
BstV2I GAAGAC 3 cut(s) 162, 549, 1034
BstX2I RGATCY 4 cut(s) 78, 622, 1348, 1843
BstXI CCANNNNNNTGG 1 cut(s) 452
BstYI RGATCY 4 cut(s) 78, 622, 1348, 1843
BsuRI GGCC 3 cut(s) 264, 869, 1121
BtgI CCRYGG 2 cut(s) 265, 768
BtsCI GGATG 9 cut(s) 226, 582, 778, 844, 1080, 1168, 1641, 1981, 2140
BtsI GCAGTG 1 cut(s) 1192
BtsIMutI CAGTG 4 cut(s) 663, 1192, 1542, 1780
BveI ACCTGC 1 cut(s) 1888
Cac8I GCNNGC 5 cut(s) 322, 415, 506, 1450, 1919
CaiI CAGNNNCTG 1 cut(s) 746
CciI TCATGA 1 cut(s) 208
CfoI GCGC 3 cut(s) 120, 510, 1130
Cfr13I GGNCC 2 cut(s) 1477, 2059
CseI GACGC 1 cut(s) 561
CsiI ACCWGGT 2 cut(s) 1803, 1875
Csp6I GTAC 6 cut(s) 650, 823, 1133, 1853, 1880, 2265
CspCI CAANNNNNGTGG 2 cut(s) 880, 915
CviQI GTAC 6 cut(s) 650, 823, 1133, 1853, 1880, 2265
DdeI CTNAG 8 cut(s) 168, 698, 785, 1268, 1277, 1383, 1583, 1709
DraI TTTAAA 1 cut(s) 2091
EaeI YGGCCR 2 cut(s) 262, 1119
Eam1104I CTCTTC 3 cut(s) 51, 474, 1800
EarI CTCTTC 3 cut(s) 51, 474, 1800
Ecl136II GAGCTC 1 cut(s) 1564
Eco130I CCWWGG 4 cut(s) 265, 600, 768, 1344
Eco24I GRGCYC 2 cut(s) 990, 1566
Eco31I GGTCTC 1 cut(s) 1334
Eco47I GGWCC 2 cut(s) 1477, 2059
Eco47III AGCGCT 1 cut(s) 1129
Eco53kI GAGCTC 1 cut(s) 1564
Eco57I CTGAAG 4 cut(s) 768, 1724, 1844, 1970
Eco88I CYCGRG 1 cut(s) 1565
Eco91I GGTNACC 2 cut(s) 1624, 1990
EcoICRI GAGCTC 1 cut(s) 1564
EcoNI CCTNNNNNAGG 2 cut(s) 133, 377
EcoO109I RGGNCCY 2 cut(s) 1477, 2059
EcoO65I GGTNACC 2 cut(s) 1624, 1990
EcoRII CCWGG 5 cut(s) 555, 1309, 1416, 1803, 1875
EcoT14I CCWWGG 4 cut(s) 265, 600, 768, 1344
EcoT38I GRGCYC 2 cut(s) 990, 1566
ErhI CCWWGG 4 cut(s) 265, 600, 768, 1344
FalI AAGNNNNNCTT 2 cut(s) 1505, 1537
FaqI GGGAC 5 cut(s) 396, 1113, 1463, 2045, 2234
FauI CCCGC 1 cut(s) 1088
FauNDI CATATG 1 cut(s) 1444
FbaI TGATCA 2 cut(s) 708, 2127
FblI GTMKAC 1 cut(s) 615
Fnu4HI GCNGC 3 cut(s) 809, 1173, 2096
FokI GGATG 9 cut(s) 233, 589, 785, 851, 1067, 1175, 1628, 1988, 2127
FriOI GRGCYC 2 cut(s) 990, 1566
Fsp4HI GCNGC 3 cut(s) 809, 1173, 2096
FspBI CTAG 7 cut(s) 50, 434, 549, 1136, 1337, 1850, 2021
GlaI GCGC 3 cut(s) 119, 509, 1129
GluI GCNGC 3 cut(s) 809, 1173, 2096
GsuI CTGGAG 1 cut(s) 403
HaeII RGCGCY 1 cut(s) 1131
HaeIII GGCC 3 cut(s) 264, 869, 1121
HapII CCGG 1 cut(s) 998
HgaI GACGC 1 cut(s) 561
HhaI GCGC 3 cut(s) 120, 510, 1130
Hin1I GRCGYC 2 cut(s) 553, 2223
Hin6I GCGC 3 cut(s) 118, 508, 1128
HinP1I GCGC 3 cut(s) 118, 508, 1128
HincII GTYRAC 2 cut(s) 31, 406
HindII GTYRAC 2 cut(s) 31, 406
HindIII AAGCTT 4 cut(s) 290, 1256, 1514, 1915
HinfI GANTC 7 cut(s) 270, 464, 1004, 1012, 1393, 1439, 1828
HpaII CCGG 1 cut(s) 998
HphI GGTGA 4 cut(s) 10, 73, 1309, 1618
Hpy166II GTNNAC 5 cut(s) 31, 406, 584, 616, 1223
Hpy188I TCNGA 9 cut(s) 83, 197, 275, 337, 379, 636, 1384, 1811, 1950
Hpy8I GTNNAC 5 cut(s) 31, 406, 584, 616, 1223
HpyCH4III ACNGT 4 cut(s) 667, 980, 1204, 1815
HpyCH4IV ACGT 3 cut(s) 640, 2223, 2290
HpyF10VI GCNNNNNNNGC 7 cut(s) 439, 514, 1118, 1127, 1136, 1513, 1556
HpyF3I CTNAG 8 cut(s) 168, 698, 785, 1268, 1277, 1383, 1583, 1709
HpySE526I ACGT 3 cut(s) 640, 2223, 2290
Hsp92I GRCGYC 2 cut(s) 553, 2223
HspAI GCGC 3 cut(s) 118, 508, 1128
Kpn2I TCCGGA 1 cut(s) 997
KpnI GGTACC 1 cut(s) 826
Ksp22I TGATCA 2 cut(s) 708, 2127
LmnI GCTCC 7 cut(s) 115, 422, 699, 1319, 1512, 1732, 2006
Lsp1109I GCAGC 3 cut(s) 795, 1159, 2082
LweI GCATC 4 cut(s) 129, 136, 211, 309
MabI ACCWGGT 2 cut(s) 1803, 1875
MaeI CTAG 7 cut(s) 50, 434, 549, 1136, 1337, 1850, 2021
MaeII ACGT 3 cut(s) 640, 2223, 2290
MaeIII GTNAC 4 cut(s) 16, 1624, 1773, 1990
MfeI CAATTG 3 cut(s) 498, 1113, 1502
MflI RGATCY 4 cut(s) 78, 622, 1348, 1843
MhlI GDGCHC 4 cut(s) 990, 1225, 1566, 1729
MlsI TGGCCA 1 cut(s) 1121
MluNI TGGCCA 1 cut(s) 1121
MlyI GAGTC 3 cut(s) 1006, 1448, 1837
Mox20I TGGCCA 1 cut(s) 1121
MroI TCCGGA 1 cut(s) 997
MroXI GAANNNNTTC 1 cut(s) 641
MscI TGGCCA 1 cut(s) 1121
MslI CAYNNNNRTG 3 cut(s) 264, 1085, 2145
Msp20I TGGCCA 1 cut(s) 1121
MspA1I CMGCKG 1 cut(s) 2041
MspCI CTTAAG 1 cut(s) 133
MspI CCGG 1 cut(s) 998
MspR9I CCNGG 5 cut(s) 557, 1311, 1418, 1805, 1877
MunI CAATTG 3 cut(s) 498, 1113, 1502
MvaI CCWGG 5 cut(s) 557, 1311, 1418, 1805, 1877
MwoI GCNNNNNNNGC 7 cut(s) 439, 514, 1118, 1127, 1136, 1513, 1556
NcoI CCATGG 2 cut(s) 265, 768
NdeI CATATG 1 cut(s) 1444
NmeAIII GCCGAG 2 cut(s) 409, 2299
NmuCI GTSAC 2 cut(s) 16, 1624
NspI RCATGY 2 cut(s) 656, 973
PagI TCATGA 1 cut(s) 208
PciI ACATGT 1 cut(s) 969
PcsI WCGNNNNNNNCGW 1 cut(s) 904
PdmI GAANNNNTTC 1 cut(s) 641
PfeI GAWTC 4 cut(s) 270, 464, 1004, 1393
PflFI GACNNNGTC 1 cut(s) 1407
PflMI CCANNNNNTGG 2 cut(s) 572, 2150
PkrI GCNGC 3 cut(s) 810, 1174, 2097
PleI GAGTC 3 cut(s) 1006, 1447, 1836
PpsI GAGTC 3 cut(s) 1006, 1447, 1836
PpuMI RGGWCCY 2 cut(s) 1477, 2059
PscI ACATGT 1 cut(s) 969
Psp124BI GAGCTC 1 cut(s) 1566
Psp1406I AACGTT 1 cut(s) 640
Psp5II RGGWCCY 2 cut(s) 1477, 2059
Psp6I CCWGG 5 cut(s) 555, 1309, 1416, 1803, 1875
PspEI GGTNACC 2 cut(s) 1624, 1990
PspGI CCWGG 5 cut(s) 555, 1309, 1416, 1803, 1875
PspPI GGNCC 2 cut(s) 1477, 2059
PspPPI RGGWCCY 2 cut(s) 1477, 2059
PstI CTGCAG 4 cut(s) 813, 1025, 1486, 1899
PstNI CAGNNNCTG 1 cut(s) 746
PsuI RGATCY 4 cut(s) 78, 622, 1348, 1843
PsyI GACNNNGTC 1 cut(s) 1407
RsaI GTAC 6 cut(s) 651, 824, 1134, 1854, 1881, 2266
RsaNI GTAC 6 cut(s) 650, 823, 1133, 1853, 1880, 2265
RseI CAYNNNNRTG 3 cut(s) 264, 1085, 2145
SacI GAGCTC 1 cut(s) 1566
SatI GCNGC 3 cut(s) 809, 1173, 2096
Sau96I GGNCC 2 cut(s) 1477, 2059
SbfI CCTGCAGG 1 cut(s) 1486
SchI GAGTC 3 cut(s) 1006, 1448, 1837
ScrFI CCNGG 5 cut(s) 557, 1311, 1418, 1805, 1877
SdaI CCTGCAGG 1 cut(s) 1486
SduI GDGCHC 4 cut(s) 990, 1225, 1566, 1729
SexAI ACCWGGT 2 cut(s) 1803, 1875
SfaNI GCATC 4 cut(s) 129, 136, 211, 309
SfcI CTRYAG 4 cut(s) 809, 1021, 1482, 1895
SinI GGWCC 2 cut(s) 1477, 2059
SmiMI CAYNNNNRTG 3 cut(s) 264, 1085, 2145
SmlI CTYRAG 3 cut(s) 133, 1282, 1397
SmoI CTYRAG 3 cut(s) 133, 1282, 1397
Sse8387I CCTGCAGG 1 cut(s) 1486
SsiI CCGC 2 cut(s) 1095, 2041
SspI AATATT 1 cut(s) 2296
SspMI CTAG 7 cut(s) 50, 434, 549, 1136, 1337, 1850, 2021
SstI GAGCTC 1 cut(s) 1566
StyD4I CCNGG 5 cut(s) 555, 1309, 1416, 1803, 1875
StyI CCWWGG 4 cut(s) 265, 600, 768, 1344
TaaI ACNGT 4 cut(s) 667, 980, 1204, 1815
TaiI ACGT 3 cut(s) 643, 2226, 2293
TaqI TCGA 6 cut(s) 93, 673, 907, 1075, 2109, 2286
TatI WGTACW 2 cut(s) 1132, 1852
TfiI GAWTC 4 cut(s) 270, 464, 1004, 1393
TscAI CASTG 4 cut(s) 670, 1192, 1549, 1787
TseFI GTSAC 2 cut(s) 16, 1624
TseI GCWGC 3 cut(s) 808, 1172, 2095
Tsp45I GTSAC 2 cut(s) 16, 1624
TspRI CASTG 4 cut(s) 670, 1192, 1549, 1787
Tth111I GACNNNGTC 1 cut(s) 1407
Van91I CCANNNNNTGG 2 cut(s) 572, 2150
Vha464I CTTAAG 1 cut(s) 133
VneI GTGCAC 1 cut(s) 1221
VpaK11BI GGWCC 2 cut(s) 1477, 2059
XagI CCTNNNNNAGG 2 cut(s) 133, 377
XapI RAATTY 7 cut(s) 233, 330, 449, 1057, 1068, 1305, 2102
XbaI TCTAGA 1 cut(s) 2020
XceI RCATGY 2 cut(s) 656, 973
XmiI GTMKAC 1 cut(s) 615
XmnI GAANNNNTTC 1 cut(s) 641
XspI CTAG 7 cut(s) 50, 434, 549, 1136, 1337, 1850, 2021
ZraI GACGTC 1 cut(s) 2224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.