Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005770.1

Orthogroup ID

OG0000482

Physical Location & Seq

Genomic Coordinates Forward (+)

49578 .. 52492

Gene Structure 2915 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005770.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

atggcagaaagtgtagtcacctttttggttgacaggctcacgacattactcgaagaagaggcggaactcttgtcagggatccgagaaaaggtcgatgacctggttgatgaattggagcgcatcaaggccttcttaagggtagctgatgcaaaggaagacagcaatcctcagctcaaagtgtgggtaaaacaagtcagagatgtagctcatgaaatggaagatgcccttgataaattcaggcttttccattcacacgatcacggccatggattccgagcttcccttcataagctttcttgcatcatcaagaaatggaaagctcaccatcaaatttctgatgatattcaaagaataaattcaaaagtgaaaagcctctccgagggacatgagagatatacactcgttgaccaagctggctccagctctgctaggctagttcagcacaacaaatttggtcaaggggatgcccttttactggaagaggctgatcttgtggcaattggccagcgcaaaaagcaactgattgaattgcttatgaaggaagacactagacgccaggtggttccagtagttgggatgggtggactagggaaaaccaccttggtcaagcaagtctacaaggatccaaaagttcagaaacgtttcaaggtacatgcttggatcactgtttctcgatcattcaagataagtcagctcctaagacacatgatcaataaaatcttcaaagttatcaggaaaccagttcctgaagatgaagaagttgaaaccatggatgacaaccagctaagagagaggattaaaaagttgctgcagaatagtaggtacctgattgttctggatgatatatggcatatacccgactgggaggccatcaatcatgcaatgccaaacaacaatcgtggtagtcgagtaatgctcactactcgcaatgttaatgtagcctctgcctcttgcttggggaaccatgacatgttctaccgtttagagcccttatctccggaagattcatggactctgttctgcaggaagacatttcaaggtaactcatgccttccaaatttggaggaaatttgtcgatccatcctgatgaaatgcgggggactgccccttgcaattgtggccatcagcgctgtactagctttaaaagacaagagaaatgtggatgattgggctgctgtttgtggcagtattggagctgaaatagaaggaaatgatcaacttgacaacatgaaaaaattgctgtatctcagttacagtgatttaccttaccatctgaaatcatgtttcttgtatctgagcatctttcctgatctctacaaaattgagcatatgagattgattcggttatggttagctgaaggatttgttattggaaaagagggaaggacaccagaagaagttgctgagagttaccttagagagttattggacagaagtttgattcaagcagcagaaacatcaactgatgggagagttaaatcatatcgcatccatgatcttttacgggagattgtcattttgaagtctagagagcaaaattttgcagcaatagaaaaagagcacggtacaatgtggtctgagaaagttcgacgactatcaatagttaacacactgcagaatgcacatcaaaagaggacaccgtctcaacttcgttctttgctcgtttttggggtagaagattcacttactgattttcccataccaaaattgtttcctacaggtgttcagttgcttacagtattagacttacaaggtgcacatctggatatgtttccaagagaggttgtcaagcttcttcttctcaggtatcttagcttgaggcatacaaaggtgaaacaaattccaggctccatcaagaagctacaaaacctagagaccttggatcttaaacactcgcaagttgttgaattaccttctgagattttgaatctcaagcgacttcgtcatctcctggtgtatcgttatgaggttgagtcatatgcacgcttcaatgccagaaaaggagttaaggtccctgcaggaatatgtggtttaattgcaattgctccaaaagctttgctttatagaggcaaatcaagacactggtgctttaatggcagagctcgggagaatgaaccaactaaggaggttaggcattttcaagttgagaaaagaagatgggagaaggacaagataattgaccttagccacatttctcgtgctcctccatttcttcagcgactatacttgacaggtcgtttagaaaagttaccacactggatttcttctcttcaaaacctggtcagactgtttctaaaatggagtcggttgaaggaggatcctctagtacatcttcagggtttgccaaacctggtacatcttgaacttctgcaagtttatgatggagaaagcttgcattttgaggcaggagggtttccaagtctgaagttattaggtattgataaattggatgaactacaatcggtaaccatagagaagggagcaatgccttgtctagaaaagttaattatccagcggtgtaaattgttgaaggtcccatctggcattgaacatttaaccaatttgtttggctccaaaaccagctggtgtgcaaacagtctctttagggcgaatggttgcgcaggcgtgccagcaccgcggggtgcagtcgttggggagagcaccaacctcgtcacagggttcttttcttgccttccggaaaaggacttcttgccttacgcgggtaagggctttggttgtggtctctttgcgttcaccgaatcgatactcaacttgaaagctgagcagagcaatcactgggaagtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009814 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0043207 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:0098542 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

935

Amino Acids

106.86

Weight (kDa)

9.07

Isoelectric Point (pI)

39.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000482)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica	MD06G1024000.v1.1
prunus_persica	Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis	pycom16g25280
rosa_chinensis	RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata	RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora	Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii	Rroxscaffold_3G00246720
rosa_rugosa	Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha	Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana	Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2620
Acc65I	GGTACC	1 cut(s)	822
AccB1I	GGYRCC	1 cut(s)	822
AccB7I	CCANNNNNTGG	1 cut(s)	572
AccI	GTMKAC	1 cut(s)	615
AccII	CGCG	2 cut(s)	2638, 2720
AccIII	TCCGGA	2 cut(s)	997, 2695
AciI	CCGC	6 cut(s)	62, 1095, 2515, 2636, 2638, 2720
AclI	AACGTT	1 cut(s)	640
AclWI	GGATC	9 cut(s)	73, 86, 617, 630, 668, 1071, 1890, 2312, 2325
AcoI	YGGCCR	3 cut(s)	262, 502, 1119
AcsI	RAATTY	8 cut(s)	233, 330, 355, 449, 1057, 1068, 1537, 1839
AcuI	CTGAAG	5 cut(s)	768, 1377, 2198, 2318, 2444
AcyI	GRCGYC	1 cut(s)	553
AfaI	GTAC	6 cut(s)	651, 824, 1134, 1567, 2328, 2355
AfeI	AGCGCT	1 cut(s)	1129
AfiI	CCNNNNNNNGG	6 cut(s)	88, 135, 379, 475, 572, 2720
AflII	CTTAAG	1 cut(s)	133
AflIII	ACRYGT	1 cut(s)	969
AjnI	CCWGG	6 cut(s)	99, 555, 1843, 1950, 2277, 2349
AjuI	GAANNNNNNNTTGG	2 cut(s)	584, 616
Alw21I	GWGCWC	5 cut(s)	1563, 1759, 2104, 2203, 2663
Alw26I	GTCTC	4 cut(s)	1647, 1868, 2603, 2747
Alw44I	GTGCAC	1 cut(s)	1755
AlwI	GGATC	9 cut(s)	73, 86, 617, 630, 668, 1071, 1890, 2312, 2325
AlwNI	CAGNNNCTG	1 cut(s)	746
Ama87I	CYCGRG	1 cut(s)	2103
Aor13HI	TCCGGA	2 cut(s)	997, 2695
Aor51HI	AGCGCT	1 cut(s)	1129
AoxI	GGCC	5 cut(s)	126, 262, 502, 867, 1119
ApaLI	GTGCAC	1 cut(s)	1755
ApeKI	GCWGC	4 cut(s)	808, 1172, 1448, 1544
ApoI	RAATTY	8 cut(s)	233, 330, 355, 449, 1057, 1068, 1537, 1839
Asp700I	GAANNNNTTC	2 cut(s)	355, 641
Asp718I	GGTACC	1 cut(s)	822
AspLEI	GCGC	4 cut(s)	120, 510, 1130, 2621
AspS9I	GGNCC	2 cut(s)	2011, 2533
AsuHPI	GGTGA	4 cut(s)	10, 314, 1843, 2746
AvaI	CYCGRG	1 cut(s)	2103
AvaII	GGWCC	2 cut(s)	2011, 2533
BaeGI	GKGCMC	1 cut(s)	1759
BalI	TGGCCA	2 cut(s)	504, 1121
BamHI	GGATCC	3 cut(s)	78, 622, 2317
BanI	GGYRCC	1 cut(s)	822
BanII	GRGCYC	2 cut(s)	990, 2104
BauI	CACGAG	1 cut(s)	2196
BbsI	GAAGAC	3 cut(s)	162, 549, 1034
Bbv12I	GWGCWC	5 cut(s)	1563, 1759, 2104, 2203, 2663
BbvCI	CCTCAGC	1 cut(s)	168
BbvI	GCAGC	4 cut(s)	795, 1159, 1460, 1556
BceAI	ACGGC	1 cut(s)	277
BcgI	CGANNNNNNTGC	2 cut(s)	2650, 2684
BciT130I	CCWGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
BclI	TGATCA	2 cut(s)	708, 1213
BcoDI	GTCTC	4 cut(s)	1647, 1868, 2603, 2747
BfaI	CTAG	9 cut(s)	429, 434, 549, 587, 1136, 1527, 1871, 2324, 2495
BfmI	CTRYAG	5 cut(s)	809, 1021, 1613, 1716, 2016
BfoI	RGCGCY	1 cut(s)	1131
BfrI	CTTAAG	1 cut(s)	133
BisI	GCNGC	4 cut(s)	809, 1173, 1449, 1545
BlpI	GCTNAGC	1 cut(s)	2781
BlsI	GCNGC	4 cut(s)	810, 1174, 1450, 1546
Bme1390I	CCNGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
Bme18I	GGWCC	2 cut(s)	2011, 2533
BmeT110I	CYCGRG	1 cut(s)	2103
BmgT120I	GGNCC	2 cut(s)	2011, 2533
BmrFI	CCNGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
BmrI	ACTGGG	2 cut(s)	871, 2806
BmsI	GCATC	7 cut(s)	129, 136, 211, 309, 454, 1308, 1497
BmuI	ACTGGG	2 cut(s)	871, 2806
BpiI	GAAGAC	3 cut(s)	162, 549, 1034
BplI	GAGNNNNNCTC	2 cut(s)	900, 932
BpmI	CTGGAG	1 cut(s)	403
Bpu10I	CCTNAGC	2 cut(s)	168, 2183
Bpu1102I	GCTNAGC	1 cut(s)	2781
BpuEI	CTTGAG	2 cut(s)	1837, 1916
Bsa29I	ATCGAT	1 cut(s)	2762
BsaHI	GRCGYC	1 cut(s)	553
BsaI	GGTCTC	2 cut(s)	1868, 2747
BsaJI	CCNNGG	6 cut(s)	265, 378, 600, 768, 1878, 2636
BsaWI	WCCGGW	2 cut(s)	997, 2695
BsaXI	ACNNNNNCTCC	2 cut(s)	1995, 2025
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 135, 379, 475, 572, 2720
Bse1I	ACTGG	7 cut(s)	480, 566, 740, 866, 2087, 2261, 2801
Bse3DI	GCAATG	3 cut(s)	888, 934, 2490
BseAI	TCCGGA	2 cut(s)	997, 2695
BseBI	CCWGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
BseCI	ATCGAT	1 cut(s)	2762
BseDI	CCNNGG	6 cut(s)	265, 378, 600, 768, 1878, 2636
BseGI	GGATG	8 cut(s)	469, 582, 778, 844, 1080, 1168, 1488, 2455
BseLI	CCNNNNNNNGG	6 cut(s)	88, 135, 379, 475, 572, 2720
BseMI	GCAATG	3 cut(s)	888, 934, 2490
BseMII	CTCAG	8 cut(s)	182, 1261, 1286, 1395, 1569, 1816, 1908, 2772
BseNI	ACTGG	7 cut(s)	480, 566, 740, 866, 2087, 2261, 2801
BseRI	GAGGAG	1 cut(s)	2193
BseSI	GKGCMC	1 cut(s)	1759
BseXI	GCAGC	4 cut(s)	795, 1159, 1460, 1556
BsgI	GTGCAG	1 cut(s)	2664
Bsh1236I	CGCG	2 cut(s)	2638, 2720
BshFI	GGCC	5 cut(s)	128, 264, 504, 869, 1121
BshNI	GGYRCC	1 cut(s)	822
BshVI	ATCGAT	1 cut(s)	2762
BsiHKAI	GWGCWC	5 cut(s)	1563, 1759, 2104, 2203, 2663
BsiHKCI	CYCGRG	1 cut(s)	2103
BsiSI	CCGG	2 cut(s)	998, 2696
BslFI	GGGAC	4 cut(s)	396, 1113, 1997, 2519
BslI	CCNNNNNNNGG	6 cut(s)	88, 135, 379, 475, 572, 2720
BsmAI	GTCTC	4 cut(s)	1647, 1868, 2603, 2747
BsmBI	CGTCTC	1 cut(s)	1647
BsmFI	GGGAC	4 cut(s)	396, 1113, 1997, 2519
BsmI	GAATGC	1 cut(s)	1624
BsnI	GGCC	5 cut(s)	128, 264, 504, 869, 1121
Bso31I	GGTCTC	2 cut(s)	1868, 2747
BsoBI	CYCGRG	1 cut(s)	2103
Bsp1286I	GDGCHC	6 cut(s)	990, 1563, 1759, 2104, 2203, 2663
Bsp13I	TCCGGA	2 cut(s)	997, 2695
Bsp1720I	GCTNAGC	1 cut(s)	2781
Bsp19I	CCATGG	2 cut(s)	265, 768
BspACI	CCGC	6 cut(s)	62, 1095, 2515, 2636, 2638, 2720
BspANI	GGCC	5 cut(s)	128, 264, 504, 869, 1121
BspCNI	CTCAG	8 cut(s)	181, 1260, 1287, 1396, 1570, 1815, 1909, 2773
BspDI	ATCGAT	1 cut(s)	2762
BspEI	TCCGGA	2 cut(s)	997, 2695
BspFNI	CGCG	2 cut(s)	2638, 2720
BspHI	TCATGA	1 cut(s)	208
BspMAI	CTGCAG	4 cut(s)	813, 1025, 1617, 2020
BspPI	GGATC	9 cut(s)	73, 86, 617, 630, 668, 1071, 1890, 2312, 2325
BspT107I	GGYRCC	1 cut(s)	822
BspTI	CTTAAG	1 cut(s)	133
BspTNI	GGTCTC	2 cut(s)	1868, 2747
BsrDI	GCAATG	3 cut(s)	888, 934, 2490
BsrI	ACTGG	7 cut(s)	480, 566, 740, 866, 2087, 2261, 2801
BssECI	CCNNGG	6 cut(s)	265, 378, 600, 768, 1878, 2636
BssNI	GRCGYC	1 cut(s)	553
BssSI	CACGAG	1 cut(s)	2196
BssT1I	CCWWGG	4 cut(s)	265, 600, 768, 1878
Bst2BI	CACGAG	1 cut(s)	2196
Bst2UI	CCWGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
Bst4CI	ACNGT	8 cut(s)	667, 980, 1256, 1565, 1641, 1738, 2289, 2597
Bst6I	CTCTTC	3 cut(s)	51, 474, 2274
BstACI	GRCGYC	1 cut(s)	553
BstAFI	CTTAAG	1 cut(s)	133
BstC8I	GCNNGC	7 cut(s)	415, 506, 1984, 2393, 2623, 2627, 2631
BstDSI	CCRYGG	3 cut(s)	265, 768, 2636
BstEII	GGTNACC	1 cut(s)	2464
BstENI	CCTNNNNNAGG	2 cut(s)	133, 377
BstF5I	GGATG	8 cut(s)	469, 582, 778, 844, 1080, 1168, 1488, 2455
BstFNI	CGCG	2 cut(s)	2638, 2720
BstH2I	RGCGCY	1 cut(s)	1131
BstHHI	GCGC	4 cut(s)	120, 510, 1130, 2621
BstMAI	GTCTC	4 cut(s)	1647, 1868, 2603, 2747
BstMWI	GCNNNNNNNGC	8 cut(s)	439, 514, 1118, 1127, 1136, 2051, 2094, 2635
BstNI	CCWGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
BstNSI	RCATGY	2 cut(s)	656, 973
BstPI	GGTNACC	1 cut(s)	2464
BstSCI	CCNGG	6 cut(s)	99, 555, 1843, 1950, 2277, 2349
BstSFI	CTRYAG	5 cut(s)	809, 1021, 1613, 1716, 2016
BstSLI	GKGCMC	1 cut(s)	1759
BstUI	CGCG	2 cut(s)	2638, 2720
BstV1I	GCAGC	4 cut(s)	795, 1159, 1460, 1556
BstV2I	GAAGAC	3 cut(s)	162, 549, 1034
BstX2I	RGATCY	4 cut(s)	78, 622, 1882, 2317
BstYI	RGATCY	4 cut(s)	78, 622, 1882, 2317
Bsu15I	ATCGAT	1 cut(s)	2762
BsuRI	GGCC	5 cut(s)	128, 264, 504, 869, 1121
BsuTUI	ATCGAT	1 cut(s)	2762
BtgI	CCRYGG	3 cut(s)	265, 768, 2636
BtsCI	GGATG	8 cut(s)	469, 582, 778, 844, 1080, 1168, 1488, 2455
BtsI	GCAGTG	1 cut(s)	1610
BtsIMutI	CAGTG	6 cut(s)	663, 1261, 1610, 2080, 2254, 2794
Cac8I	GCNNGC	7 cut(s)	415, 506, 1984, 2393, 2623, 2627, 2631
CaiI	CAGNNNCTG	1 cut(s)	746
CciI	TCATGA	1 cut(s)	208
CfoI	GCGC	4 cut(s)	120, 510, 1130, 2621
Cfr13I	GGNCC	2 cut(s)	2011, 2533
Cfr42I	CCGCGG	1 cut(s)	2639
ClaI	ATCGAT	1 cut(s)	2762
CseI	GACGC	1 cut(s)	561
CsiI	ACCWGGT	3 cut(s)	99, 2277, 2349
Csp6I	GTAC	6 cut(s)	650, 823, 1133, 1566, 2327, 2354
CspCI	CAANNNNNGTGG	2 cut(s)	880, 915
CviQI	GTAC	6 cut(s)	650, 823, 1133, 1566, 2327, 2354
DraI	TTTAAA	1 cut(s)	1143
EaeI	YGGCCR	3 cut(s)	262, 502, 1119
Eam1104I	CTCTTC	3 cut(s)	51, 474, 2274
EarI	CTCTTC	3 cut(s)	51, 474, 2274
EciI	GGCGGA	1 cut(s)	77
Ecl136II	GAGCTC	1 cut(s)	2102
Eco130I	CCWWGG	4 cut(s)	265, 600, 768, 1878
Eco147I	AGGCCT	1 cut(s)	128
Eco24I	GRGCYC	2 cut(s)	990, 2104
Eco31I	GGTCTC	2 cut(s)	1868, 2747
Eco47I	GGWCC	2 cut(s)	2011, 2533
Eco47III	AGCGCT	1 cut(s)	1129
Eco53kI	GAGCTC	1 cut(s)	2102
Eco57I	CTGAAG	5 cut(s)	768, 1377, 2198, 2318, 2444
Eco88I	CYCGRG	1 cut(s)	2103
Eco91I	GGTNACC	1 cut(s)	2464
EcoICRI	GAGCTC	1 cut(s)	2102
EcoNI	CCTNNNNNAGG	2 cut(s)	133, 377
EcoO109I	RGGNCCY	2 cut(s)	2011, 2533
EcoO65I	GGTNACC	1 cut(s)	2464
EcoRII	CCWGG	6 cut(s)	99, 555, 1843, 1950, 2277, 2349
EcoT14I	CCWWGG	4 cut(s)	265, 600, 768, 1878
EcoT38I	GRGCYC	2 cut(s)	990, 2104
ErhI	CCWWGG	4 cut(s)	265, 600, 768, 1878
Esp3I	CGTCTC	1 cut(s)	1647
FaqI	GGGAC	4 cut(s)	396, 1113, 1997, 2519
FauI	CCCGC	3 cut(s)	1088, 2631, 2713
FauNDI	CATATG	2 cut(s)	1329, 1978
FbaI	TGATCA	2 cut(s)	708, 1213
FblI	GTMKAC	1 cut(s)	615
Fnu4HI	GCNGC	4 cut(s)	809, 1173, 1449, 1545
FokI	GGATG	8 cut(s)	476, 589, 785, 851, 1067, 1175, 1475, 2462
FriOI	GRGCYC	2 cut(s)	990, 2104
Fsp4HI	GCNGC	4 cut(s)	809, 1173, 1449, 1545
FspBI	CTAG	9 cut(s)	429, 434, 549, 587, 1136, 1527, 1871, 2324, 2495
FspI	TGCGCA	1 cut(s)	2620
GlaI	GCGC	4 cut(s)	119, 509, 1129, 2620
GluI	GCNGC	4 cut(s)	809, 1173, 1449, 1545
GsuI	CTGGAG	1 cut(s)	403
HaeII	RGCGCY	1 cut(s)	1131
HaeIII	GGCC	5 cut(s)	128, 264, 504, 869, 1121
HapII	CCGG	2 cut(s)	998, 2696
HgaI	GACGC	1 cut(s)	561
HhaI	GCGC	4 cut(s)	120, 510, 1130, 2621
Hin1I	GRCGYC	1 cut(s)	553
Hin6I	GCGC	4 cut(s)	118, 508, 1128, 2619
HinP1I	GCGC	4 cut(s)	118, 508, 1128, 2619
HincII	GTYRAC	3 cut(s)	31, 406, 1606
HindII	GTYRAC	3 cut(s)	31, 406, 1606
HindIII	AAGCTT	4 cut(s)	290, 1790, 2052, 2389
HpaI	GTTAAC	1 cut(s)	1606
HpaII	CCGG	2 cut(s)	998, 2696
HphI	GGTGA	4 cut(s)	10, 314, 1843, 2746
Hpy166II	GTNNAC	7 cut(s)	31, 406, 584, 616, 1606, 1757, 2754
Hpy8I	GTNNAC	7 cut(s)	31, 406, 584, 616, 1606, 1757, 2754
Hpy99I	CGWCG	1 cut(s)	1593
HpyCH4III	ACNGT	8 cut(s)	667, 980, 1256, 1565, 1641, 1738, 2289, 2597
HpyCH4IV	ACGT	1 cut(s)	640
HpyF10VI	GCNNNNNNNGC	8 cut(s)	439, 514, 1118, 1127, 1136, 2051, 2094, 2635
HpySE526I	ACGT	1 cut(s)	640
Hsp92I	GRCGYC	1 cut(s)	553
HspAI	GCGC	4 cut(s)	118, 508, 1128, 2619
Kpn2I	TCCGGA	2 cut(s)	997, 2695
KpnI	GGTACC	1 cut(s)	826
Ksp22I	TGATCA	2 cut(s)	708, 1213
KspAI	GTTAAC	1 cut(s)	1606
KspI	CCGCGG	1 cut(s)	2639
LmnI	GCTCC	9 cut(s)	115, 422, 699, 1193, 1853, 2050, 2206, 2480, 2576
Lsp1109I	GCAGC	4 cut(s)	795, 1159, 1460, 1556
LweI	GCATC	7 cut(s)	129, 136, 211, 309, 454, 1308, 1497
MabI	ACCWGGT	3 cut(s)	99, 2277, 2349
MaeI	CTAG	9 cut(s)	429, 434, 549, 587, 1136, 1527, 1871, 2324, 2495
MaeII	ACGT	1 cut(s)	640
MaeIII	GTNAC	7 cut(s)	16, 1040, 1250, 1409, 2247, 2464, 2671
MfeI	CAATTG	3 cut(s)	498, 1113, 2040
MflI	RGATCY	4 cut(s)	78, 622, 1882, 2317
MhlI	GDGCHC	6 cut(s)	990, 1563, 1759, 2104, 2203, 2663
MlsI	TGGCCA	2 cut(s)	504, 1121
MluNI	TGGCCA	2 cut(s)	504, 1121
MlyI	GAGTC	3 cut(s)	1006, 1982, 2311
Mox20I	TGGCCA	2 cut(s)	504, 1121
MroI	TCCGGA	2 cut(s)	997, 2695
MroXI	GAANNNNTTC	2 cut(s)	355, 641
MscI	TGGCCA	2 cut(s)	504, 1121
MslI	CAYNNNNRTG	2 cut(s)	264, 1085
Msp20I	TGGCCA	2 cut(s)	504, 1121
MspA1I	CMGCKG	3 cut(s)	2515, 2583, 2638
MspCI	CTTAAG	1 cut(s)	133
MspI	CCGG	2 cut(s)	998, 2696
MspR9I	CCNGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
MunI	CAATTG	3 cut(s)	498, 1113, 2040
Mva1269I	GAATGC	1 cut(s)	1624
MvaI	CCWGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
MvnI	CGCG	2 cut(s)	2638, 2720
MwoI	GCNNNNNNNGC	8 cut(s)	439, 514, 1118, 1127, 1136, 2051, 2094, 2635
NcoI	CCATGG	2 cut(s)	265, 768
NdeI	CATATG	2 cut(s)	1329, 1978
NmuCI	GTSAC	2 cut(s)	16, 2671
NsbI	TGCGCA	1 cut(s)	2620
NspI	RCATGY	2 cut(s)	656, 973
PagI	TCATGA	1 cut(s)	208
PceI	AGGCCT	1 cut(s)	128
PciI	ACATGT	1 cut(s)	969
PcsI	WCGNNNNNNNCGW	1 cut(s)	904
PctI	GAATGC	1 cut(s)	1624
PdmI	GAANNNNTTC	2 cut(s)	355, 641
PfeI	GAWTC	7 cut(s)	270, 1004, 1339, 1441, 1679, 1927, 2759
PflFI	GACNNNGTC	2 cut(s)	1639, 1941
PflMI	CCANNNNNTGG	1 cut(s)	572
PkrI	GCNGC	4 cut(s)	810, 1174, 1450, 1546
PleI	GAGTC	3 cut(s)	1006, 1981, 2310
PpsI	GAGTC	3 cut(s)	1006, 1981, 2310
PpuMI	RGGWCCY	2 cut(s)	2011, 2533
PscI	ACATGT	1 cut(s)	969
Psp124BI	GAGCTC	1 cut(s)	2104
Psp1406I	AACGTT	1 cut(s)	640
Psp5II	RGGWCCY	2 cut(s)	2011, 2533
Psp6I	CCWGG	6 cut(s)	99, 555, 1843, 1950, 2277, 2349
PspEI	GGTNACC	1 cut(s)	2464
PspGI	CCWGG	6 cut(s)	99, 555, 1843, 1950, 2277, 2349
PspPI	GGNCC	2 cut(s)	2011, 2533
PspPPI	RGGWCCY	2 cut(s)	2011, 2533
PstI	CTGCAG	4 cut(s)	813, 1025, 1617, 2020
PstNI	CAGNNNCTG	1 cut(s)	746
PsuI	RGATCY	4 cut(s)	78, 622, 1882, 2317
PsyI	GACNNNGTC	2 cut(s)	1639, 1941
PvuII	CAGCTG	1 cut(s)	2583
RsaI	GTAC	6 cut(s)	651, 824, 1134, 1567, 2328, 2355
RsaNI	GTAC	6 cut(s)	650, 823, 1133, 1566, 2327, 2354
RseI	CAYNNNNRTG	2 cut(s)	264, 1085
SacI	GAGCTC	1 cut(s)	2104
SacII	CCGCGG	1 cut(s)	2639
SatI	GCNGC	4 cut(s)	809, 1173, 1449, 1545
Sau96I	GGNCC	2 cut(s)	2011, 2533
SbfI	CCTGCAGG	1 cut(s)	2020
SchI	GAGTC	3 cut(s)	1006, 1982, 2311
ScrFI	CCNGG	6 cut(s)	101, 557, 1845, 1952, 2279, 2351
SdaI	CCTGCAGG	1 cut(s)	2020
SduI	GDGCHC	6 cut(s)	990, 1563, 1759, 2104, 2203, 2663
SexAI	ACCWGGT	3 cut(s)	99, 2277, 2349
SfaNI	GCATC	7 cut(s)	129, 136, 211, 309, 454, 1308, 1497
SfcI	CTRYAG	5 cut(s)	809, 1021, 1613, 1716, 2016
Sfr303I	CCGCGG	1 cut(s)	2639
SgrBI	CCGCGG	1 cut(s)	2639
SinI	GGWCC	2 cut(s)	2011, 2533
SmiMI	CAYNNNNRTG	2 cut(s)	264, 1085
SmlI	CTYRAG	3 cut(s)	133, 1816, 1931
SmoI	CTYRAG	3 cut(s)	133, 1816, 1931
Sse8387I	CCTGCAGG	1 cut(s)	2020
SseBI	AGGCCT	1 cut(s)	128
SsiI	CCGC	6 cut(s)	62, 1095, 2515, 2636, 2638, 2720
SspMI	CTAG	9 cut(s)	429, 434, 549, 587, 1136, 1527, 1871, 2324, 2495
SstI	GAGCTC	1 cut(s)	2104
StuI	AGGCCT	1 cut(s)	128
StyD4I	CCNGG	6 cut(s)	99, 555, 1843, 1950, 2277, 2349
StyI	CCWWGG	4 cut(s)	265, 600, 768, 1878
TaaI	ACNGT	8 cut(s)	667, 980, 1256, 1565, 1641, 1738, 2289, 2597
TaiI	ACGT	1 cut(s)	643
TaqI	TCGA	7 cut(s)	51, 93, 673, 907, 1075, 1588, 2762
TatI	WGTACW	2 cut(s)	1132, 2326
TfiI	GAWTC	7 cut(s)	270, 1004, 1339, 1441, 1679, 1927, 2759
TscAI	CASTG	6 cut(s)	670, 1261, 1617, 2087, 2261, 2801
TseFI	GTSAC	2 cut(s)	16, 2671
TseI	GCWGC	4 cut(s)	808, 1172, 1448, 1544
Tsp45I	GTSAC	2 cut(s)	16, 2671
TspRI	CASTG	6 cut(s)	670, 1261, 1617, 2087, 2261, 2801
Tth111I	GACNNNGTC	2 cut(s)	1639, 1941
Van91I	CCANNNNNTGG	1 cut(s)	572
Vha464I	CTTAAG	1 cut(s)	133
VneI	GTGCAC	1 cut(s)	1755
VpaK11BI	GGWCC	2 cut(s)	2011, 2533
XagI	CCTNNNNNAGG	2 cut(s)	133, 377
XapI	RAATTY	8 cut(s)	233, 330, 355, 449, 1057, 1068, 1537, 1839
XbaI	TCTAGA	2 cut(s)	1526, 2494
XceI	RCATGY	2 cut(s)	656, 973
XmiI	GTMKAC	1 cut(s)	615
XmnI	GAANNNNTTC	2 cut(s)	355, 641
XspI	CTAG	9 cut(s)	429, 434, 549, 587, 1136, 1527, 1871, 2324, 2495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.