Rw7G023110

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
27644299 .. 27653985
9687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G023110.1

Sequence Viewer

Length: 2844 bp
ATGGCTGAAAGTGTAGTAACATTTTTAGTTTTCAAGCTTAAGACGTTACTCGAAGAAGAGGTGAAACTATTGTCAGGGATCCAAGTACAGGTCCAGGAAGTGGTTGATGAATTAGAACGCATCCAGGCGTTCTTAAGGGTTGCTGATGCAAAGGAAGACAGCGATCCTCAGCTGAAAGTGTGGGTTGATCAAGTCAGAGATGTGGCTCATGAGATGGAAGATGCCCTTGATAAATTCAGGCATTCCTATTCACATGATCACGGTCATGGATTCCGAGCTTCCCTTCATAAGCTTTCTTGTATCATCAAGAAATGGAAAGCTCGCAGACAAATTGCTGCTGATATTGAAGGCCTAAAGTATAGAGTCACGAGTCTCTCAAAGGGGCAAGAGCGATACAAATTTGTTGATCAAGCTGGCTCCACCTCTGGTCGTCAGGTTCAACATCAGTTCTATCGAGGGGATGCCATTTTACTAGAAGAGGCTGAGCTGGTGGCAATCGGCGAGAGGAAAAGGAAACTTTTTGAGTTGCTTATGAAGGAAGAATCCACACGCCAGGTGGTTCCTATAGTTGGGATGGGAGGACTGGGAAAAACTACCTTGGTAAAGCAATTGTATGAGGATGCTAAAGTCAAAAAGCATTTTAAGGTACATGCTTGGATCACTGTCTCTCGATCATTCCAGATGAATAAGCTTCTTAGACACATGATCCATCAGATCTTCGAAGTTATCAGAAAACCAGTTCCTCAAGATGAAGAAATTGAAAGCATGGACGACAACCAGCTAAGAGAGAGAATTAAAAAATTGCTGCAGCATAGTAGGTACCTGATTGTTCTGGATGATCTATGGAACAGAGCAGACTGGGATGCCATCAATCATGCAATGCCAAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGCAATGTTAAGGTAGCCTCTGCCTCTTGCTTGGGAAACCTTGAGATGATCTACCATTTAGAACCCTTATCTCCGGAGGATTCTTGGACTCTTTTCTGTAAGAAGACATTTCATGGAGAGTCATGCCTTCCAAATTTGGAGAAATATTGTCGAAGCATCTTAAGCAAATGTGGAGGACTACCCCTTGCAATTGTCTCAATCGGTGCTGTTCTAGCTACAAAAGACAAGACAAATGTAGATGAATGGACTGCTGTTTATGGAAGTATTGGGGCTGAAATTCAGGAAAATGACCAGCTTGACAATATGAAAAAAGTGCTGTATCTCAGTTTCAGTGATTTACCATACCATCTGAAGTCATGTTTCTTGTATCTGAGCATCTTTCCTGATATCTACAAAATTGATCATATGAGATTAATTCGATTATGGTTAGCTGAAGGATTTATTATGGAAACTGAAGGAAAGACACCAGAAGAAGTTGCACAAAGTTACCTTAAGGAGCTGTGGGACAGAAGTTTGATTCAAGCAACAGAAACAGCAACTGATGGGCGAGTTAAGTCCTATCGCATCCATGATCTTTTACGGGAGATTATCATTTTAAAGTCTAGAGAGCAAAATTTTGCAGCAATAGTGAAAGAGCAGGGTACAATGTGGTCTGACAAAGTTCGACGACTATCAATAGTTAATACATTGCAGAATGTACAAAAGAAGAGGACTCCATCTAAACTTCGCTCTTTGCTCTTCTTTGGGGTAGAAGATTCACTAAATGAATTTTCCATACCAAAATTGTTTCCAACGGGTCTTCAGCTGCTAACTGTATTAGACTTGCAAGGTGCACATCTACATGTGTTTCCAAAAGAGGTTGTGAAGCTGGTTTTTCTCAGATACCTTAGCCTGAGGAATAGCAAGGTGAAACAAATTCCAAGCTCCATCAAGAAGCTTAGAAACCTAGAGACTCTCGACCTCAAACACTCCCATGTTGTTGAATTGCCTGCTGAGATTTTGAATCTCAAGCAACTTCGCCATCTCCTGGTGTATCGTTATGAAGTTGAGTCCTATGCACGATTTAATGCCAAATATGGAGTTAAGCTTCCTGCAGGAATATGTAGCTTGCAATCTCTCCAAAAGCTTTGTTTTATAGAGGCAAATCAATACAGTGGCGCTTTAATGGCAGAGCTAGGGAGAATGAATCAACTAAGGAGGTTAGGCATTTTGAAGTTGAGAAAAGAAGATGGGGTAACCTTATGCTCATCCATCCAAAAGATGACAAATCTTCGCTCGTTGTCTGTATCTTCTGCAGAGATGGACGAGTTAATTGATTTGAGCTACATGTCCTGTGCTCCTGAGTTTCTTAGGCGACTGTACTTGACAGGTCGTTTAGCAAACTTACCACACTGGATTTCTTCACTTCAAAACCTGGTCAGACTGTTTCTAAAATGGAGTCGTATTTTGACTATACCATTGGAGATACCATTGGGTTTGCCAAACCTGGTACATCTTGAACTTCTGCAAGTTTATGATGGAGAAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATCGGTAACCATAGAGAAGGGAGCAATGCCTTGTCTAGAAAAGTTAATTATCCAGCGGTGTAAATTGTTGAAGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAATATTTCGATATGCCAGATGAATTGATCATGCCACTACATCCAGATGGTGGAGAAGATCATTGGAAAGTTGCTCATGTTCCAGCAGTTTATTATTCCTATTGGAGAGATGGGGGTTGGGACGTCTATTCATTAGTCAATGAAGGGGAGAGTTTTAATTCGGGTACTTCTGCCGAGAGGAGGCTCGAACGTAATATTCTGTGGAAGGTGTAG

Protein Analysis

947

Amino Acids

108.93

Weight (kDa)

8.64

Isoelectric Point (pI)

41.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 2.9e-24 Rx N-terminal domain
NB-ARC PF00931 169 - 348 2.1e-44 NB-ARC domain
WHD_DRP PF23559 433 - 504 4.9e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 549 - 876 4.3e-45 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2757
Acc65I GGTACC 1 cut(s) 819
AccB1I GGYRCC 1 cut(s) 819
AccB7I CCANNNNNTGG 3 cut(s) 100, 1948, 2681
AccIII TCCGGA 1 cut(s) 994
AciI CCGC 1 cut(s) 2572
AclWI GGATC 5 cut(s) 73, 86, 158, 665, 700
AcsI RAATTY 7 cut(s) 233, 398, 1054, 1197, 1534, 1688, 1836
AcuI CTGAAG 5 cut(s) 1292, 1374, 1395, 1706, 2501
AcyI GRCGYC 1 cut(s) 2754
AfaI GTAC 8 cut(s) 87, 648, 821, 1564, 1620, 2282, 2412, 2797
AfiI CCNNNNNNNGG 6 cut(s) 88, 100, 569, 1948, 2681, 2811
AflII CTTAAG 4 cut(s) 38, 133, 1081, 1412
AflIII ACRYGT 2 cut(s) 1762, 2247
AjnI CCWGG 6 cut(s) 93, 123, 552, 1947, 2334, 2406
Alw21I GWGCWC 2 cut(s) 1756, 2260
Alw26I GTCTC 4 cut(s) 377, 670, 1120, 1865
Alw44I GTGCAC 1 cut(s) 1752
AlwI GGATC 5 cut(s) 73, 86, 158, 665, 700
AlwNI CAGNNNCTG 1 cut(s) 1460
Aor13HI TCCGGA 1 cut(s) 994
AoxI GGCC 1 cut(s) 349
ApaLI GTGCAC 1 cut(s) 1752
ApeKI GCWGC 6 cut(s) 335, 805, 808, 1541, 1726, 2626
ApoI RAATTY 7 cut(s) 233, 398, 1054, 1197, 1534, 1688, 1836
AseI ATTAAT 1 cut(s) 1334
Asp718I GGTACC 1 cut(s) 819
AspLEI GCGC 1 cut(s) 2081
AspS9I GGNCC 2 cut(s) 91, 2590
AsuHPI GGTGA 2 cut(s) 73, 1840
AsuII TTCGAA 1 cut(s) 720
AvaII GGWCC 2 cut(s) 91, 2590
AxyI CCTNAGG 1 cut(s) 1814
BaeGI GKGCMC 1 cut(s) 1756
BamHI GGATCC 1 cut(s) 78
BanI GGYRCC 1 cut(s) 819
BauI CACGAG 1 cut(s) 367
BbsI GAAGAC 3 cut(s) 162, 1031, 1712
Bbv12I GWGCWC 2 cut(s) 1756, 2260
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 6 cut(s) 322, 792, 820, 1553, 1713, 2613
BciT130I CCWGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
BclI TGATCA 5 cut(s) 187, 256, 406, 1321, 2658
BcoDI GTCTC 4 cut(s) 377, 670, 1120, 1865
BfaI CTAG 6 cut(s) 473, 1133, 1524, 1868, 2096, 2552
BfmI CTRYAG 4 cut(s) 564, 806, 2013, 2214
BfoI RGCGCY 1 cut(s) 2082
BfrI CTTAAG 4 cut(s) 38, 133, 1081, 1412
BglII AGATCT 1 cut(s) 714
BisI GCNGC 6 cut(s) 336, 806, 809, 1542, 1727, 2627
BlpI GCTNAGC 1 cut(s) 483
BlsI GCNGC 6 cut(s) 337, 807, 810, 1543, 1728, 2628
Bme1390I CCNGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
Bme18I GGWCC 2 cut(s) 91, 2590
BmgT120I GGNCC 2 cut(s) 91, 2590
BmiI GGNNCC 5 cut(s) 80, 418, 561, 821, 2592
BmrFI CCNGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
BmrI ACTGGG 2 cut(s) 593, 868
BmsI GCATC 9 cut(s) 129, 136, 211, 451, 610, 853, 1086, 1305, 1494
BmuI ACTGGG 2 cut(s) 593, 868
BpiI GAAGAC 3 cut(s) 162, 1031, 1712
BplI GAGNNNNNCTC 2 cut(s) 897, 929
Bpu10I CCTNAGC 2 cut(s) 168, 1808
Bpu1102I GCTNAGC 1 cut(s) 483
Bpu14I TTCGAA 1 cut(s) 720
BpuEI CTTGAG 3 cut(s) 729, 983, 1913
BsaHI GRCGYC 1 cut(s) 2754
BsaJI CCNNGG 1 cut(s) 597
BsaWI WCCGGW 1 cut(s) 994
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 100, 569, 1948, 2681, 2811
Bse1I ACTGG 4 cut(s) 588, 737, 863, 2318
Bse21I CCTNAGG 1 cut(s) 1814
Bse3DI GCAATG 4 cut(s) 885, 931, 1607, 2547
BseAI TCCGGA 1 cut(s) 994
BseBI CCWGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
BseDI CCNNGG 1 cut(s) 597
BseLI CCNNNNNNNGG 6 cut(s) 88, 100, 569, 1948, 2681, 2811
BseMI GCAATG 4 cut(s) 885, 931, 1607, 2547
BseMII CTCAG 8 cut(s) 182, 474, 1258, 1283, 1805, 1813, 1905, 2253
BseNI ACTGG 4 cut(s) 588, 737, 863, 2318
BseRI GAGGAG 1 cut(s) 2824
BseSI GKGCMC 1 cut(s) 1756
BseXI GCAGC 6 cut(s) 322, 792, 820, 1553, 1713, 2613
BshFI GGCC 1 cut(s) 351
BshNI GGYRCC 1 cut(s) 819
BsiHKAI GWGCWC 2 cut(s) 1756, 2260
BsiSI CCGG 1 cut(s) 995
BslFI GGGAC 3 cut(s) 1439, 2576, 2765
BslI CCNNNNNNNGG 6 cut(s) 88, 100, 569, 1948, 2681, 2811
BsmAI GTCTC 4 cut(s) 377, 670, 1120, 1865
BsmFI GGGAC 3 cut(s) 1439, 2576, 2765
BsmI GAATGC 1 cut(s) 241
BsnI GGCC 1 cut(s) 351
Bsp119I TTCGAA 1 cut(s) 720
Bsp1286I GDGCHC 2 cut(s) 1756, 2260
Bsp13I TCCGGA 1 cut(s) 994
Bsp1407I TGTACA 1 cut(s) 1618
Bsp1720I GCTNAGC 1 cut(s) 483
BspACI CCGC 1 cut(s) 2572
BspANI GGCC 1 cut(s) 351
BspCNI CTCAG 8 cut(s) 181, 475, 1257, 1284, 1806, 1812, 1906, 2254
BspEI TCCGGA 1 cut(s) 994
BspHI TCATGA 1 cut(s) 208
BspLI GGNNCC 5 cut(s) 80, 418, 561, 821, 2592
BspMAI CTGCAG 3 cut(s) 810, 2017, 2218
BspPI GGATC 5 cut(s) 73, 86, 158, 665, 700
BspQI GCTCTTC 1 cut(s) 1664
BspT104I TTCGAA 1 cut(s) 720
BspT107I GGYRCC 1 cut(s) 819
BspTI CTTAAG 4 cut(s) 38, 133, 1081, 1412
BsrDI GCAATG 4 cut(s) 885, 931, 1607, 2547
BsrGI TGTACA 1 cut(s) 1618
BsrI ACTGG 4 cut(s) 588, 737, 863, 2318
BssECI CCNNGG 1 cut(s) 597
BssNI GRCGYC 1 cut(s) 2754
BssSI CACGAG 1 cut(s) 367
BssT1I CCWWGG 1 cut(s) 597
Bst2BI CACGAG 1 cut(s) 367
Bst2UI CCWGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
Bst4CI ACNGT 6 cut(s) 263, 664, 1735, 2075, 2280, 2346
Bst6I CTCTTC 4 cut(s) 51, 471, 1622, 1664
BstACI GRCGYC 1 cut(s) 2754
BstAFI CTTAAG 4 cut(s) 38, 133, 1081, 1412
BstAUI TGTACA 1 cut(s) 1618
BstBI TTCGAA 1 cut(s) 720
BstC8I GCNNGC 5 cut(s) 322, 415, 1911, 2030, 2450
BstEII GGTNACC 2 cut(s) 2155, 2521
BstH2I RGCGCY 1 cut(s) 2082
BstHHI GCGC 1 cut(s) 2081
BstMAI GTCTC 4 cut(s) 377, 670, 1120, 1865
BstMWI GCNNNNNNNGC 3 cut(s) 1083, 1133, 2087
BstNI CCWGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
BstNSI RCATGY 3 cut(s) 653, 1766, 2251
BstPI GGTNACC 2 cut(s) 2155, 2521
BstSCI CCNGG 6 cut(s) 93, 123, 552, 1947, 2334, 2406
BstSFI CTRYAG 4 cut(s) 564, 806, 2013, 2214
BstSLI GKGCMC 1 cut(s) 1756
BstV1I GCAGC 6 cut(s) 322, 792, 820, 1553, 1713, 2613
BstV2I GAAGAC 3 cut(s) 162, 1031, 1712
BstX2I RGATCY 2 cut(s) 78, 714
BstYI RGATCY 2 cut(s) 78, 714
Bsu36I CCTNAGG 1 cut(s) 1814
BsuRI GGCC 1 cut(s) 351
BtsIMutI CAGTG 4 cut(s) 660, 1258, 2080, 2311
Cac8I GCNNGC 5 cut(s) 322, 415, 1911, 2030, 2450
CaiI CAGNNNCTG 1 cut(s) 1460
CciI TCATGA 1 cut(s) 208
CfoI GCGC 1 cut(s) 2081
Cfr13I GGNCC 2 cut(s) 91, 2590
CsiI ACCWGGT 2 cut(s) 2334, 2406
Csp6I GTAC 8 cut(s) 86, 647, 820, 1563, 1619, 2281, 2411, 2796
CspCI CAANNNNNGTGG 2 cut(s) 877, 912
CviQI GTAC 8 cut(s) 86, 647, 820, 1563, 1619, 2281, 2411, 2796
DraI TTTAAA 2 cut(s) 1518, 2622
Eam1104I CTCTTC 4 cut(s) 51, 471, 1622, 1664
EarI CTCTTC 4 cut(s) 51, 471, 1622, 1664
Eco130I CCWWGG 1 cut(s) 597
Eco147I AGGCCT 1 cut(s) 351
Eco32I GATATC 1 cut(s) 1309
Eco47I GGWCC 2 cut(s) 91, 2590
Eco57I CTGAAG 5 cut(s) 1292, 1374, 1395, 1706, 2501
Eco81I CCTNAGG 1 cut(s) 1814
Eco91I GGTNACC 2 cut(s) 2155, 2521
EcoO109I RGGNCCY 1 cut(s) 2590
EcoO65I GGTNACC 2 cut(s) 2155, 2521
EcoRII CCWGG 6 cut(s) 93, 123, 552, 1947, 2334, 2406
EcoRV GATATC 1 cut(s) 1309
EcoT14I CCWWGG 1 cut(s) 597
ErhI CCWWGG 1 cut(s) 597
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FaqI GGGAC 3 cut(s) 1439, 2576, 2765
FauNDI CATATG 1 cut(s) 1326
FbaI TGATCA 5 cut(s) 187, 256, 406, 1321, 2658
Fnu4HI GCNGC 6 cut(s) 336, 806, 809, 1542, 1727, 2627
Fsp4HI GCNGC 6 cut(s) 336, 806, 809, 1542, 1727, 2627
FspBI CTAG 6 cut(s) 473, 1133, 1524, 1868, 2096, 2552
GlaI GCGC 1 cut(s) 2080
GluI GCNGC 6 cut(s) 336, 806, 809, 1542, 1727, 2627
HaeII RGCGCY 1 cut(s) 2082
HaeIII GGCC 1 cut(s) 351
HapII CCGG 1 cut(s) 995
HhaI GCGC 1 cut(s) 2081
Hin1I GRCGYC 1 cut(s) 2754
Hin6I GCGC 1 cut(s) 2079
HinP1I GCGC 1 cut(s) 2079
HindIII AAGCTT 7 cut(s) 35, 290, 689, 1856, 2006, 2045, 2446
HpaII CCGG 1 cut(s) 995
HphI GGTGA 2 cut(s) 73, 1840
Hpy166II GTNNAC 1 cut(s) 1754
Hpy8I GTNNAC 1 cut(s) 1754
Hpy99I CGWCG 1 cut(s) 1590
HpyCH4III ACNGT 6 cut(s) 263, 664, 1735, 2075, 2280, 2346
HpyCH4IV ACGT 3 cut(s) 44, 2754, 2821
HpyF10VI GCNNNNNNNGC 3 cut(s) 1083, 1133, 2087
HpySE526I ACGT 3 cut(s) 44, 2754, 2821
Hsp92I GRCGYC 1 cut(s) 2754
HspAI GCGC 1 cut(s) 2079
Kpn2I TCCGGA 1 cut(s) 994
KpnI GGTACC 1 cut(s) 823
Ksp22I TGATCA 5 cut(s) 187, 256, 406, 1321, 2658
LguI GCTCTTC 1 cut(s) 1664
LmnI GCTCC 5 cut(s) 422, 1417, 1850, 2263, 2537
Lsp1109I GCAGC 6 cut(s) 322, 792, 820, 1553, 1713, 2613
LweI GCATC 9 cut(s) 129, 136, 211, 451, 610, 853, 1086, 1305, 1494
MabI ACCWGGT 2 cut(s) 2334, 2406
MaeI CTAG 6 cut(s) 473, 1133, 1524, 1868, 2096, 2552
MaeII ACGT 3 cut(s) 44, 2754, 2821
MaeIII GTNAC 6 cut(s) 16, 45, 364, 1406, 2155, 2521
MfeI CAATTG 2 cut(s) 608, 1110
MflI RGATCY 2 cut(s) 78, 714
MhlI GDGCHC 2 cut(s) 1756, 2260
MlyI GAGTC 8 cut(s) 372, 379, 1003, 1049, 1627, 1867, 1979, 2368
MmeI TCCRAC 1 cut(s) 1736
MroI TCCGGA 1 cut(s) 994
MslI CAYNNNNRTG 4 cut(s) 264, 1761, 1893, 2676
MspA1I CMGCKG 3 cut(s) 172, 1726, 2572
MspCI CTTAAG 4 cut(s) 38, 133, 1081, 1412
MspI CCGG 1 cut(s) 995
MspR9I CCNGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
MunI CAATTG 2 cut(s) 608, 1110
Mva1269I GAATGC 1 cut(s) 241
MvaI CCWGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
MwoI GCNNNNNNNGC 3 cut(s) 1083, 1133, 2087
NdeI CATATG 1 cut(s) 1326
NlaIV GGNNCC 5 cut(s) 80, 418, 561, 821, 2592
NmeAIII GCCGAG 1 cut(s) 2830
NmuCI GTSAC 1 cut(s) 364
NspI RCATGY 3 cut(s) 653, 1766, 2251
NspV TTCGAA 1 cut(s) 720
PagI TCATGA 1 cut(s) 208
PceI AGGCCT 1 cut(s) 351
PciI ACATGT 2 cut(s) 1762, 2247
PciSI GCTCTTC 1 cut(s) 1664
PcsI WCGNNNNNNNCGW 1 cut(s) 901
PctI GAATGC 1 cut(s) 241
PfeI GAWTC 7 cut(s) 270, 542, 1001, 1438, 1676, 1924, 2107
PflMI CCANNNNNTGG 3 cut(s) 100, 1948, 2681
PfoI TCCNGGA 1 cut(s) 93
PkrI GCNGC 6 cut(s) 337, 807, 810, 1543, 1728, 2628
PleI GAGTC 8 cut(s) 371, 378, 1003, 1048, 1627, 1867, 1978, 2367
PpsI GAGTC 8 cut(s) 371, 378, 1003, 1048, 1627, 1867, 1978, 2367
PpuMI RGGWCCY 1 cut(s) 2590
PscI ACATGT 2 cut(s) 1762, 2247
PshBI ATTAAT 1 cut(s) 1334
Psp5II RGGWCCY 1 cut(s) 2590
Psp6I CCWGG 6 cut(s) 93, 123, 552, 1947, 2334, 2406
PspEI GGTNACC 2 cut(s) 2155, 2521
PspGI CCWGG 6 cut(s) 93, 123, 552, 1947, 2334, 2406
PspN4I GGNNCC 5 cut(s) 80, 418, 561, 821, 2592
PspPI GGNCC 2 cut(s) 91, 2590
PspPPI RGGWCCY 1 cut(s) 2590
PstI CTGCAG 3 cut(s) 810, 2017, 2218
PstNI CAGNNNCTG 1 cut(s) 1460
PsuI RGATCY 2 cut(s) 78, 714
PvuII CAGCTG 2 cut(s) 172, 1726
RsaI GTAC 8 cut(s) 87, 648, 821, 1564, 1620, 2282, 2412, 2797
RsaNI GTAC 8 cut(s) 86, 647, 820, 1563, 1619, 2281, 2411, 2796
RseI CAYNNNNRTG 4 cut(s) 264, 1761, 1893, 2676
SapI GCTCTTC 1 cut(s) 1664
SatI GCNGC 6 cut(s) 336, 806, 809, 1542, 1727, 2627
Sau96I GGNCC 2 cut(s) 91, 2590
SbfI CCTGCAGG 1 cut(s) 2017
SchI GAGTC 8 cut(s) 372, 379, 1003, 1049, 1627, 1867, 1979, 2368
ScrFI CCNGG 6 cut(s) 95, 125, 554, 1949, 2336, 2408
SdaI CCTGCAGG 1 cut(s) 2017
SduI GDGCHC 2 cut(s) 1756, 2260
SexAI ACCWGGT 2 cut(s) 2334, 2406
SfaNI GCATC 9 cut(s) 129, 136, 211, 451, 610, 853, 1086, 1305, 1494
SfcI CTRYAG 4 cut(s) 564, 806, 2013, 2214
SfuI TTCGAA 1 cut(s) 720
SinI GGWCC 2 cut(s) 91, 2590
SmiMI CAYNNNNRTG 4 cut(s) 264, 1761, 1893, 2676
SmlI CTYRAG 7 cut(s) 38, 133, 744, 962, 1081, 1412, 1928
SmoI CTYRAG 7 cut(s) 38, 133, 744, 962, 1081, 1412, 1928
Sse8387I CCTGCAGG 1 cut(s) 2017
SseBI AGGCCT 1 cut(s) 351
SsiI CCGC 1 cut(s) 2572
SspI AATATT 3 cut(s) 1067, 2636, 2827
SspMI CTAG 6 cut(s) 473, 1133, 1524, 1868, 2096, 2552
StuI AGGCCT 1 cut(s) 351
StyD4I CCNGG 6 cut(s) 93, 123, 552, 1947, 2334, 2406
StyI CCWWGG 1 cut(s) 597
TaaI ACNGT 6 cut(s) 263, 664, 1735, 2075, 2280, 2346
TaiI ACGT 3 cut(s) 47, 2757, 2824
TatI WGTACW 3 cut(s) 85, 1618, 2280
TfiI GAWTC 7 cut(s) 270, 542, 1001, 1438, 1676, 1924, 2107
TscAI CASTG 4 cut(s) 667, 1258, 2080, 2318
TseFI GTSAC 1 cut(s) 364
TseI GCWGC 6 cut(s) 335, 805, 808, 1541, 1726, 2626
Tsp45I GTSAC 1 cut(s) 364
TspRI CASTG 4 cut(s) 667, 1258, 2080, 2318
Van91I CCANNNNNTGG 3 cut(s) 100, 1948, 2681
Vha464I CTTAAG 4 cut(s) 38, 133, 1081, 1412
VneI GTGCAC 1 cut(s) 1752
VpaK11BI GGWCC 2 cut(s) 91, 2590
VspI ATTAAT 1 cut(s) 1334
XapI RAATTY 7 cut(s) 233, 398, 1054, 1197, 1534, 1688, 1836
XbaI TCTAGA 2 cut(s) 1523, 2551
XceI RCATGY 3 cut(s) 653, 1766, 2251
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XspI CTAG 6 cut(s) 473, 1133, 1524, 1868, 2096, 2552
ZraI GACGTC 1 cut(s) 2755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.