Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0000482

Physical Location & Seq

Genomic Coordinates Reverse (-)

28954985 .. 28958115

Gene Structure 3131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG285100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2844 bp

ATGGCAGAAAGTGTAGTGACCTTTTTAGTTGGCAAGGTCAAGTCACTACTGGAAGGAGAGGTGAACCTATTGTCAGGGATCCAAGCACAGGTCAAGGACATGGTTAATGAATTAGAGCGCATTCAGGCGTTCATAAGGGTTGCTGATGCAAGGGAAGACGGTGACCCTCAACTCAAAGTGTGGGTCAAACAAATCAGAGAAGTGGCTCATGAGATGGAAGATGCCCTGGATAAATTCAGGCTTTCCTATTCCAATGACCCCCTGCGTGGCTTTCGTACTTCACTTAAGAAGCTTACTTGCATCATAAAGAAATGGAAAGCTTGCCATGAAATTGCTGCTGATATTGAAGGGCTAAACTCCAAAGTCAGAAGCCTCAGAGAGAGACGTGACGCATACAATCTTGTTGGCGAAGCTGGCTCCACCTCTTCTCGTCGGATTGGGCAACGTCACTTTGGTCAAGGGGATGCCCTCTTACTGGAAGCAGCTGATCTTGTGGCAATCAGGGAGCCTAAAAAACAGCTGATCGAGTTGCTTATGAAGCATGAGCCAGGACGCCAGGTGTTATCAGTGGTTGGGATGGGAGGATTGGGGAAAACTACCTTGGTTAAGCAAGTGTATGAGGATCCCAAGGTTAAGAAACACTTTAAGGTTCACGCCTGGATCACTGTTTCTCAGTCAGTCAATATGAACCAGCTCCTAAGACTCATGATTCATAACATCTTCCAAGTTATTCAGAAACCACCTGAGGAAGAGGTTGATAGCATGGACAACAACCAGCTACGTGAGAGAATCAAAAAATTGCTGCAGCAAAGTAGGTACCTGATTGTTCTTGATGATTTATGGCACATAGATGCCTGGGATGTGATAAATCATTCAATCCCCAATAACAAACTTGGTAGTCGAGTAATGCTCACTACTCGTAATCATGCAGTAGCACATGCCTCTTGCTTGGGGAAGCAAGGTATGATCTACCTTTTAGAGCCCTTATCTGTAGAAGAGTCTCGGTCTCTTTTATACAAGAAGACATTTCAGGCAGACTCATGCCCGCCAAACTTGAAGAGCATTTGTGACTGCATCTTAAGCAAATGTGGAGGACTGCCCCTAGCAATTGTAGCAATTGGCGCTGTTCTAGCTGCAAAAGACAAGAGGATTGTAGATGAATGGACTGCTATTTGTACAAGTATTGGTGCCGAGATTCAGGAAAATGATCATCTTGACAATATGAAGAAATTACTGTATCTCAGTTTCAGTGATTTACCTTACCAGCTGAAATCGTGTTTCTTGTATTTGAGCATCTTTCCTGATCTCTACAGAATTGAGCGTATGAGATTAATTCGGTTATGGTTAGCTGAAGGATTTCTGATCGAAATGGAAGGAAAGACACCAGAAGAAGTTGCAGAGAGTTACCTTAAGGAGCTATGGGACAGAAGTTTGATTCAGGCAGCAGAAACAGCAACTGATGGGAGAGTCAAATCATATCGTATCCACAATGTTTTACGAGAGATTGTCATTTCAAAGTCCAAAGAGCAAAATTTTGCAGCAATGGAGAAAGAGAAAGATATAGTGTGGCCAGAAAAAGTTCGAAGACTATCAATAGTTAACTCGGTGCAGAATGTACAAAAGAAGAGGACTCCATCTACACTTCGCTCTTTGCTCATCTTTGGGGTAGAAGGTTCACTTTCTGACTTTTCCATACCAAAATTATTTCCTATAGGTCTTCAGTTGCTTACTGTATTAGACTTGCAAGGTGCACATATAGAGGTCTTTCCAAAAGAGGTTGTCAAGCTGGTTCTTCTCAGGTTTCTTAGCCTGAGGAGTAGCAAGGTGAAACAAATTCCAACCTCCATCAAGAAGCTAAGATACTTACAGACTCTGGACCTTAAACACTCCCATGTCGTTGAATTGCCAGCTGAGATTTTGAATCTCAAGCAACTTCGCCATCTCCTGGTATATCGTTATGAAGTTGAGTCTTATGCACGCTTTAATTCCAAATATGGAGTTAAGGTTCCTGCAGGAATATGTGGCTTGGAAAATCTCCAAAAGCTGTGTAAAATAGAGGCAAATCAAGACAATGGTGCTTTAATGGCAGACCTTGAAAGATTGACTCAACTAAGGAGGTTAGGCATTTTAAAGTTGAGAGAAGAAGATGGACTAGCCTTATGTTTATCCATTCAAAAGATGAAAAACCTTCGCGCATTGTCTGTATCTTCAGGAGAGAAGGAAGGGACAATTGATCTGAGCCATATTTCTTGTGCTCCTGAATTTCTTCAGCGACTGTACTTGACAGGTCGTTTAGAAAACTTACCACACTGGATTTCTTCTCTTCAAAACCTGGTCCGACTGTTTCTAAAATGGAGTCGGTTGAAGGAAGATCCTGTTGTCCATCTTCAACGCTTGCCAAATTTGGTACATCTTGAACTCCTACAAGTTTATGATGGGGAAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAATCTGAAGTTACTAGGTATTGATAAATTAGAAGAACTTCAATTGGTAAAGATAGATAAGGGAGCAATGCCTTGTCTAGAAAAGCTTATTATCCAACGCTGTAAATTGTTGAAGAAGGTCCCATACGGCATTGAATTCTTAACCAGTTTGAAGTTGCTTGAATTTTTCGATATGCCAGATGAATTAATCATGCCACTACATCCAGATGATGGAGAAGATCATTGGAGAGTCGCTCATGTCCCGGCAGTTTATTATTCCTATTGGAAAGGTGGCGGTTGGGATGTCTACTCATTAGTCAATGACGGGGAGGGATTTCATCATGGTACTTCTGCCATAAGGAGGCTCGAACCTAATATACTATGGAAGGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0002376 GO:0003674 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009605 GO:0009607 GO:0009626 GO:0009814 GO:0009987 GO:0012501 GO:0016020 GO:0019897 GO:0019898 GO:0023052 GO:0033554 GO:0034050 GO:0036094 GO:0043207 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0045087 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0065007 GO:0071944 GO:0097159 GO:0098542 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

LRR_8 NB-ARC

Protein Analysis

947

Amino Acids

108.08

Weight (kDa)

8.82

Isoelectric Point (pI)

42.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 82	2e-23	Rx N-terminal domain
NB-ARC	PF00931	170 - 347	6.2e-39	NB-ARC domain
WHD_DRP	PF23559	432 - 502	5.7e-20	Disease resistance protein Winged helix domain
LRR_14	PF23598	548 - 877	1.9e-45	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000482)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica	MD06G1024000.v1.1
prunus_persica	Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis	pycom16g25280
rosa_chinensis	RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata	RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora	Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii	Rroxscaffold_3G00246720
rosa_rugosa	Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha	Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana	Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	816
AccB1I	GGYRCC	2 cut(s)	816, 1187
AccB7I	CCANNNNNTGG	2 cut(s)	1945, 2681
AccI	GTMKAC	1 cut(s)	2757
AccII	CGCG	1 cut(s)	2193
AciI	CCGC	2 cut(s)	1046, 2745
AclWI	GGATC	6 cut(s)	73, 86, 617, 630, 668, 2366
AcoI	YGGCCR	1 cut(s)	1568
AcsI	RAATTY	7 cut(s)	233, 1531, 1833, 2261, 2401, 2606, 2633
AcuI	CTGAAG	5 cut(s)	1371, 1703, 2193, 2252, 2498
AcyI	GRCGYC	1 cut(s)	553
AfaI	GTAC	7 cut(s)	277, 818, 1177, 1617, 2279, 2409, 2797
AfiI	CCNNNNNNNGG	6 cut(s)	88, 266, 475, 1945, 2681, 2811
AflII	CTTAAG	3 cut(s)	284, 1078, 1409
AjiI	CACGTC	1 cut(s)	386
AjnI	CCWGG	7 cut(s)	225, 547, 555, 656, 854, 1944, 2331
AjuI	GAANNNNNNNTTGG	2 cut(s)	584, 616
AloI	GAACNNNNNNTCC	2 cut(s)	1989, 2021
Alw21I	GWGCWC	2 cut(s)	1753, 2257
Alw26I	GTCTC	3 cut(s)	376, 1005, 1011
Alw44I	GTGCAC	1 cut(s)	1749
AlwI	GGATC	6 cut(s)	73, 86, 617, 630, 668, 2366
AlwNI	CAGNNNCTG	3 cut(s)	1457, 1873, 2275
AoxI	GGCC	1 cut(s)	1568
ApaLI	GTGCAC	1 cut(s)	1749
ApeKI	GCWGC	7 cut(s)	335, 482, 802, 805, 1133, 1442, 1538
ApoI	RAATTY	7 cut(s)	233, 1531, 1833, 2261, 2401, 2606, 2633
ArsI	GACNNNNNNTTYG	2 cut(s)	168, 200
AseI	ATTAAT	2 cut(s)	1331, 2657
Asp700I	GAANNNNTTC	4 cut(s)	1356, 1578, 2265, 2508
Asp718I	GGTACC	1 cut(s)	816
AspLEI	GCGC	3 cut(s)	120, 1124, 2195
AspS9I	GGNCC	3 cut(s)	1876, 2335, 2590
AsuC2I	CCSGG	1 cut(s)	2714
AsuHPI	GGTGA	3 cut(s)	73, 173, 1837
AsuII	TTCGAA	1 cut(s)	1582
AvaII	GGWCC	3 cut(s)	1876, 2335, 2590
AxyI	CCTNAGG	2 cut(s)	744, 1811
BaeGI	GKGCMC	1 cut(s)	1753
BalI	TGGCCA	1 cut(s)	1570
BamHI	GGATCC	2 cut(s)	78, 622
BanI	GGYRCC	2 cut(s)	816, 1187
BanII	GRGCYC	1 cut(s)	984
BarI	GAAGNNNNNNTAC	4 cut(s)	1844, 1876, 2579, 2611
BbsI	GAAGAC	4 cut(s)	162, 1028, 1591, 1709
Bbv12I	GWGCWC	2 cut(s)	1753, 2257
BbvI	GCAGC	7 cut(s)	322, 494, 789, 817, 1120, 1454, 1550
BceAI	ACGGC	1 cut(s)	2614
BciT130I	CCWGG	7 cut(s)	227, 549, 557, 658, 856, 1946, 2333
BciVI	GTATCC	1 cut(s)	1493
BclI	TGATCA	1 cut(s)	1207
BcnI	CCSGG	1 cut(s)	2714
BcoDI	GTCTC	3 cut(s)	376, 1005, 1011
BfaI	CTAG	6 cut(s)	1103, 1130, 2153, 2486, 2549, 2842
BfmI	CTRYAG	5 cut(s)	803, 990, 1309, 1710, 2010
BfoI	RGCGCY	1 cut(s)	1125
BfrI	CTTAAG	3 cut(s)	284, 1078, 1409
BfuI	GTATCC	1 cut(s)	1493
BisI	GCNGC	7 cut(s)	336, 483, 803, 806, 1134, 1443, 1539
BlsI	GCNGC	7 cut(s)	337, 484, 804, 807, 1135, 1444, 1540
Bme1390I	CCNGG	8 cut(s)	227, 549, 557, 658, 856, 1946, 2333, 2714
Bme18I	GGWCC	3 cut(s)	1876, 2335, 2590
BmgBI	CACGTC	1 cut(s)	386
BmgT120I	GGNCC	3 cut(s)	1876, 2335, 2590
BmiI	GGNNCC	8 cut(s)	80, 418, 507, 624, 818, 1189, 2007, 2592
BmrFI	CCNGG	8 cut(s)	227, 549, 557, 658, 856, 1946, 2333, 2714
BmsI	GCATC	7 cut(s)	136, 211, 309, 454, 841, 1083, 1302
BpiI	GAAGAC	4 cut(s)	162, 1028, 1591, 1709
BplI	GAGNNNNNCTC	4 cut(s)	894, 926, 2689, 2721
Bpu14I	TTCGAA	1 cut(s)	1582
BpuEI	CTTGAG	1 cut(s)	1910
BpuMI	CCSGG	1 cut(s)	2714
BsaAI	YACGTR	1 cut(s)	782
BsaHI	GRCGYC	1 cut(s)	553
BsaI	GGTCTC	1 cut(s)	1011
BsaJI	CCNNGG	4 cut(s)	225, 600, 627, 855
BsaXI	ACNNNNNCTCC	2 cut(s)	1989, 2019
Bsc4I	CCNNNNNNNGG	6 cut(s)	88, 266, 475, 1945, 2681, 2811
Bse1I	ACTGG	4 cut(s)	54, 480, 2315, 2616
Bse21I	CCTNAGG	2 cut(s)	744, 1811
Bse3DI	GCAATG	2 cut(s)	1548, 2544
BseBI	CCWGG	7 cut(s)	227, 549, 557, 658, 856, 1946, 2333
BseDI	CCNNGG	4 cut(s)	225, 600, 627, 855
BseGI	GGATG	5 cut(s)	469, 582, 865, 2671, 2758
BseLI	CCNNNNNNNGG	6 cut(s)	88, 266, 475, 1945, 2681, 2811
BseMI	GCAATG	2 cut(s)	1548, 2544
BseMII	CTCAG	8 cut(s)	388, 686, 735, 1255, 1802, 1810, 1902, 2228
BseNI	ACTGG	4 cut(s)	54, 480, 2315, 2616
BseRI	GAGGAG	1 cut(s)	1828
BseSI	GKGCMC	1 cut(s)	1753
BseXI	GCAGC	7 cut(s)	322, 494, 789, 817, 1120, 1454, 1550
BsgI	GTGCAG	1 cut(s)	1628
Bsh1236I	CGCG	1 cut(s)	2193
BshFI	GGCC	1 cut(s)	1570
BshNI	GGYRCC	2 cut(s)	816, 1187
BsiHKAI	GWGCWC	2 cut(s)	1753, 2257
BsiSI	CCGG	1 cut(s)	2714
BslFI	GGGAC	4 cut(s)	1436, 2239, 2576, 2696
BslI	CCNNNNNNNGG	6 cut(s)	88, 266, 475, 1945, 2681, 2811
BsmAI	GTCTC	3 cut(s)	376, 1005, 1011
BsmBI	CGTCTC	1 cut(s)	376
BsmFI	GGGAC	4 cut(s)	1436, 2239, 2576, 2696
BsmI	GAATGC	1 cut(s)	120
BsnI	GGCC	1 cut(s)	1570
Bso31I	GGTCTC	1 cut(s)	1011
Bsp119I	TTCGAA	1 cut(s)	1582
Bsp1286I	GDGCHC	3 cut(s)	984, 1753, 2257
Bsp1407I	TGTACA	2 cut(s)	1175, 1615
BspACI	CCGC	2 cut(s)	1046, 2745
BspANI	GGCC	1 cut(s)	1570
BspCNI	CTCAG	8 cut(s)	387, 685, 736, 1254, 1803, 1809, 1903, 2229
BspFNI	CGCG	1 cut(s)	2193
BspHI	TCATGA	2 cut(s)	208, 705
BspLI	GGNNCC	8 cut(s)	80, 418, 507, 624, 818, 1189, 2007, 2592
BspMAI	CTGCAG	2 cut(s)	807, 2014
BspPI	GGATC	6 cut(s)	73, 86, 617, 630, 668, 2366
BspQI	GCTCTTC	1 cut(s)	1052
BspT104I	TTCGAA	1 cut(s)	1582
BspT107I	GGYRCC	2 cut(s)	816, 1187
BspTI	CTTAAG	3 cut(s)	284, 1078, 1409
BspTNI	GGTCTC	1 cut(s)	1011
BsrDI	GCAATG	2 cut(s)	1548, 2544
BsrGI	TGTACA	2 cut(s)	1175, 1615
BsrI	ACTGG	4 cut(s)	54, 480, 2315, 2616
BssECI	CCNNGG	4 cut(s)	225, 600, 627, 855
BssNI	GRCGYC	1 cut(s)	553
BssT1I	CCWWGG	2 cut(s)	600, 627
Bst2UI	CCWGG	7 cut(s)	227, 549, 557, 658, 856, 1946, 2333
Bst4CI	ACNGT	6 cut(s)	161, 667, 1236, 1732, 2277, 2343
Bst6I	CTCTTC	6 cut(s)	430, 744, 990, 1052, 1619, 2328
BstACI	GRCGYC	1 cut(s)	553
BstAFI	CTTAAG	3 cut(s)	284, 1078, 1409
BstAUI	TGTACA	2 cut(s)	1175, 1615
BstBAI	YACGTR	1 cut(s)	782
BstBI	TTCGAA	1 cut(s)	1582
BstC8I	GCNNGC	7 cut(s)	322, 415, 1046, 1908, 1978, 2396, 2447
BstEII	GGTNACC	1 cut(s)	161
BstF5I	GGATG	5 cut(s)	469, 582, 865, 2671, 2758
BstFNI	CGCG	1 cut(s)	2193
BstH2I	RGCGCY	1 cut(s)	1125
BstHHI	GCGC	3 cut(s)	120, 1124, 2195
BstMAI	GTCTC	3 cut(s)	376, 1005, 1011
BstMWI	GCNNNNNNNGC	8 cut(s)	414, 538, 1080, 1112, 1121, 1130, 1451, 2084
BstNI	CCWGG	7 cut(s)	227, 549, 557, 658, 856, 1946, 2333
BstNSI	RCATGY	1 cut(s)	941
BstPI	GGTNACC	1 cut(s)	161
BstSCI	CCNGG	8 cut(s)	225, 547, 555, 656, 854, 1944, 2331, 2712
BstSFI	CTRYAG	5 cut(s)	803, 990, 1309, 1710, 2010
BstSLI	GKGCMC	1 cut(s)	1753
BstUI	CGCG	1 cut(s)	2193
BstV1I	GCAGC	7 cut(s)	322, 494, 789, 817, 1120, 1454, 1550
BstV2I	GAAGAC	4 cut(s)	162, 1028, 1591, 1709
BstX2I	RGATCY	3 cut(s)	78, 622, 2371
BstYI	RGATCY	3 cut(s)	78, 622, 2371
Bsu36I	CCTNAGG	2 cut(s)	744, 1811
BsuI	GTATCC	1 cut(s)	1493
BsuRI	GGCC	1 cut(s)	1570
BtrI	CACGTC	1 cut(s)	386
BtsCI	GGATG	5 cut(s)	469, 582, 865, 2671, 2758
BtsIMutI	CAGTG	4 cut(s)	573, 663, 1255, 2308
Cac8I	GCNNGC	7 cut(s)	322, 415, 1046, 1908, 1978, 2396, 2447
CaiI	CAGNNNCTG	3 cut(s)	1457, 1873, 2275
CciI	TCATGA	2 cut(s)	208, 705
CfoI	GCGC	3 cut(s)	120, 1124, 2195
Cfr13I	GGNCC	3 cut(s)	1876, 2335, 2590
CseI	GACGC	2 cut(s)	398, 561
CsiI	ACCWGGT	1 cut(s)	2331
Csp6I	GTAC	7 cut(s)	276, 817, 1176, 1616, 2278, 2408, 2796
CviQI	GTAC	7 cut(s)	276, 817, 1176, 1616, 2278, 2408, 2796
DraI	TTTAAA	1 cut(s)	2130
EaeI	YGGCCR	1 cut(s)	1568
Eam1104I	CTCTTC	6 cut(s)	430, 744, 990, 1052, 1619, 2328
EarI	CTCTTC	6 cut(s)	430, 744, 990, 1052, 1619, 2328
Eco130I	CCWWGG	2 cut(s)	600, 627
Eco24I	GRGCYC	1 cut(s)	984
Eco31I	GGTCTC	1 cut(s)	1011
Eco47I	GGWCC	3 cut(s)	1876, 2335, 2590
Eco57I	CTGAAG	5 cut(s)	1371, 1703, 2193, 2252, 2498
Eco81I	CCTNAGG	2 cut(s)	744, 1811
Eco91I	GGTNACC	1 cut(s)	161
EcoO109I	RGGNCCY	1 cut(s)	2590
EcoO65I	GGTNACC	1 cut(s)	161
EcoRI	GAATTC	1 cut(s)	2606
EcoRII	CCWGG	7 cut(s)	225, 547, 555, 656, 854, 1944, 2331
EcoT14I	CCWWGG	2 cut(s)	600, 627
EcoT38I	GRGCYC	1 cut(s)	984
ErhI	CCWWGG	2 cut(s)	600, 627
Esp3I	CGTCTC	1 cut(s)	376
FalI	AAGNNNNNCTT	4 cut(s)	626, 658, 1662, 1694
FaqI	GGGAC	4 cut(s)	1436, 2239, 2576, 2696
FauI	CCCGC	1 cut(s)	1053
FbaI	TGATCA	1 cut(s)	1207
FblI	GTMKAC	1 cut(s)	2757
Fnu4HI	GCNGC	7 cut(s)	336, 483, 803, 806, 1134, 1443, 1539
FokI	GGATG	5 cut(s)	476, 589, 872, 2658, 2765
FriOI	GRGCYC	1 cut(s)	984
Fsp4HI	GCNGC	7 cut(s)	336, 483, 803, 806, 1134, 1443, 1539
FspBI	CTAG	6 cut(s)	1103, 1130, 2153, 2486, 2549, 2842
GlaI	GCGC	3 cut(s)	119, 1123, 2194
GluI	GCNGC	7 cut(s)	336, 483, 803, 806, 1134, 1443, 1539
HaeII	RGCGCY	1 cut(s)	1125
HaeIII	GGCC	1 cut(s)	1570
HapII	CCGG	1 cut(s)	2714
HgaI	GACGC	2 cut(s)	398, 561
HhaI	GCGC	3 cut(s)	120, 1124, 2195
Hin1I	GRCGYC	1 cut(s)	553
Hin6I	GCGC	3 cut(s)	118, 1122, 2193
HinP1I	GCGC	3 cut(s)	118, 1122, 2193
HincII	GTYRAC	1 cut(s)	1600
HindII	GTYRAC	1 cut(s)	1600
HindIII	AAGCTT	4 cut(s)	290, 318, 2443, 2555
HpaI	GTTAAC	1 cut(s)	1600
HpaII	CCGG	1 cut(s)	2714
HphI	GGTGA	3 cut(s)	73, 173, 1837
Hpy166II	GTNNAC	6 cut(s)	64, 652, 1600, 1676, 1751, 2758
Hpy8I	GTNNAC	6 cut(s)	64, 652, 1600, 1676, 1751, 2758
Hpy99I	CGWCG	1 cut(s)	435
HpyCH4III	ACNGT	6 cut(s)	161, 667, 1236, 1732, 2277, 2343
HpyCH4IV	ACGT	3 cut(s)	385, 445, 781
HpyF10VI	GCNNNNNNNGC	8 cut(s)	414, 538, 1080, 1112, 1121, 1130, 1451, 2084
HpySE526I	ACGT	3 cut(s)	385, 445, 781
Hsp92I	GRCGYC	1 cut(s)	553
HspAI	GCGC	3 cut(s)	118, 1122, 2193
KpnI	GGTACC	1 cut(s)	820
Ksp22I	TGATCA	1 cut(s)	1207
KspAI	GTTAAC	1 cut(s)	1600
LguI	GCTCTTC	1 cut(s)	1052
LmnI	GCTCC	6 cut(s)	422, 505, 699, 1414, 2260, 2534
Lsp1109I	GCAGC	7 cut(s)	322, 494, 789, 817, 1120, 1454, 1550
LweI	GCATC	7 cut(s)	136, 211, 309, 454, 841, 1083, 1302
MabI	ACCWGGT	1 cut(s)	2331
MaeI	CTAG	6 cut(s)	1103, 1130, 2153, 2486, 2549, 2842
MaeII	ACGT	3 cut(s)	385, 445, 781
MaeIII	GTNAC	8 cut(s)	16, 42, 161, 386, 446, 1067, 1403, 2481
MfeI	CAATTG	4 cut(s)	1107, 1116, 2229, 2513
MflI	RGATCY	3 cut(s)	78, 622, 2371
MhlI	GDGCHC	3 cut(s)	984, 1753, 2257
MlsI	TGGCCA	1 cut(s)	1570
MluNI	TGGCCA	1 cut(s)	1570
MmeI	TCCRAC	4 cut(s)	413, 1862, 2362, 2590
Mox20I	TGGCCA	1 cut(s)	1570
MroXI	GAANNNNTTC	4 cut(s)	1356, 1578, 2265, 2508
MscI	TGGCCA	1 cut(s)	1570
MslI	CAYNNNNRTG	3 cut(s)	849, 1890, 2676
Msp20I	TGGCCA	1 cut(s)	1570
MspA1I	CMGCKG	4 cut(s)	485, 520, 1267, 1910
MspCI	CTTAAG	3 cut(s)	284, 1078, 1409
MspI	CCGG	1 cut(s)	2714
MspR9I	CCNGG	8 cut(s)	227, 549, 557, 658, 856, 1946, 2333, 2714
MunI	CAATTG	4 cut(s)	1107, 1116, 2229, 2513
Mva1269I	GAATGC	1 cut(s)	120
MvaI	CCWGG	7 cut(s)	227, 549, 557, 658, 856, 1946, 2333
MvnI	CGCG	1 cut(s)	2193
MwoI	GCNNNNNNNGC	8 cut(s)	414, 538, 1080, 1112, 1121, 1130, 1451, 2084
NciI	CCSGG	1 cut(s)	2714
NlaIV	GGNNCC	8 cut(s)	80, 418, 507, 624, 818, 1189, 2007, 2592
NmeAIII	GCCGAG	1 cut(s)	1216
NmuCI	GTSAC	6 cut(s)	16, 42, 161, 386, 446, 1067
NspI	RCATGY	1 cut(s)	941
NspV	TTCGAA	1 cut(s)	1582
PagI	TCATGA	2 cut(s)	208, 705
PciSI	GCTCTTC	1 cut(s)	1052
PctI	GAATGC	1 cut(s)	120
PdmI	GAANNNNTTC	4 cut(s)	1356, 1578, 2265, 2508
PfeI	GAWTC	5 cut(s)	709, 789, 1195, 1435, 1921
PflMI	CCANNNNNTGG	2 cut(s)	1945, 2681
PkrI	GCNGC	7 cut(s)	337, 484, 804, 807, 1135, 1444, 1540
Ppu21I	YACGTR	1 cut(s)	782
PpuMI	RGGWCCY	1 cut(s)	2590
PshBI	ATTAAT	2 cut(s)	1331, 2657
Psp5II	RGGWCCY	1 cut(s)	2590
Psp6I	CCWGG	7 cut(s)	225, 547, 555, 656, 854, 1944, 2331
PspEI	GGTNACC	1 cut(s)	161
PspGI	CCWGG	7 cut(s)	225, 547, 555, 656, 854, 1944, 2331
PspN4I	GGNNCC	8 cut(s)	80, 418, 507, 624, 818, 1189, 2007, 2592
PspPI	GGNCC	3 cut(s)	1876, 2335, 2590
PspPPI	RGGWCCY	1 cut(s)	2590
PsrI	GAACNNNNNNTAC	2 cut(s)	2811, 2843
PstI	CTGCAG	2 cut(s)	807, 2014
PstNI	CAGNNNCTG	3 cut(s)	1457, 1873, 2275
PsuI	RGATCY	3 cut(s)	78, 622, 2371
PvuII	CAGCTG	4 cut(s)	485, 520, 1267, 1910
RsaI	GTAC	7 cut(s)	277, 818, 1177, 1617, 2279, 2409, 2797
RsaNI	GTAC	7 cut(s)	276, 817, 1176, 1616, 2278, 2408, 2796
RseI	CAYNNNNRTG	3 cut(s)	849, 1890, 2676
SapI	GCTCTTC	1 cut(s)	1052
SatI	GCNGC	7 cut(s)	336, 483, 803, 806, 1134, 1443, 1539
Sau96I	GGNCC	3 cut(s)	1876, 2335, 2590
SbfI	CCTGCAGG	1 cut(s)	2014
ScrFI	CCNGG	8 cut(s)	227, 549, 557, 658, 856, 1946, 2333, 2714
SdaI	CCTGCAGG	1 cut(s)	2014
SduI	GDGCHC	3 cut(s)	984, 1753, 2257
SexAI	ACCWGGT	1 cut(s)	2331
SfaNI	GCATC	7 cut(s)	136, 211, 309, 454, 841, 1083, 1302
SfcI	CTRYAG	5 cut(s)	803, 990, 1309, 1710, 2010
SfuI	TTCGAA	1 cut(s)	1582
SinI	GGWCC	3 cut(s)	1876, 2335, 2590
SmiMI	CAYNNNNRTG	3 cut(s)	849, 1890, 2676
SmlI	CTYRAG	4 cut(s)	284, 1078, 1409, 1925
SmoI	CTYRAG	4 cut(s)	284, 1078, 1409, 1925
Sse8387I	CCTGCAGG	1 cut(s)	2014
SsiI	CCGC	2 cut(s)	1046, 2745
SspMI	CTAG	6 cut(s)	1103, 1130, 2153, 2486, 2549, 2842
StyD4I	CCNGG	8 cut(s)	225, 547, 555, 656, 854, 1944, 2331, 2712
StyI	CCWWGG	2 cut(s)	600, 627
TaaI	ACNGT	6 cut(s)	161, 667, 1236, 1732, 2277, 2343
TaiI	ACGT	3 cut(s)	388, 448, 784
TaqI	TCGA	6 cut(s)	525, 901, 1365, 1582, 2640, 2817
TaqII	GACCGA	1 cut(s)	993
TatI	WGTACW	3 cut(s)	1175, 1615, 2277
TfiI	GAWTC	5 cut(s)	709, 789, 1195, 1435, 1921
TscAI	CASTG	4 cut(s)	573, 670, 1255, 2315
TseFI	GTSAC	6 cut(s)	16, 42, 161, 386, 446, 1067
TseI	GCWGC	7 cut(s)	335, 482, 802, 805, 1133, 1442, 1538
Tsp45I	GTSAC	6 cut(s)	16, 42, 161, 386, 446, 1067
TspRI	CASTG	4 cut(s)	573, 670, 1255, 2315
Van91I	CCANNNNNTGG	2 cut(s)	1945, 2681
Vha464I	CTTAAG	3 cut(s)	284, 1078, 1409
VneI	GTGCAC	1 cut(s)	1749
VpaK11BI	GGWCC	3 cut(s)	1876, 2335, 2590
VspI	ATTAAT	2 cut(s)	1331, 2657
XapI	RAATTY	7 cut(s)	233, 1531, 1833, 2261, 2401, 2606, 2633
XbaI	TCTAGA	1 cut(s)	2548
XceI	RCATGY	1 cut(s)	941
XmiI	GTMKAC	1 cut(s)	2757
XmnI	GAANNNNTTC	4 cut(s)	1356, 1578, 2265, 2508
XspI	CTAG	6 cut(s)	1103, 1130, 2153, 2486, 2549, 2842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.