RchiOBHm_Chr7g0212621

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
29866325 .. 29868472
2148 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ19027

Sequence Viewer

Length: 2148 bp
ATGATCAATAAAATCTTCAAAGTTATCCAGAAACTGGTTCCTGAAGATGAAGAAGTTGAAACCATGGATGACAACCAGCTAAGAAAGAGGATTAAAAAGTTGCTGCAGAATAGTAGGTACCTGATTGTTCTGGATGATATATGGGATATACCAGGCTGGGAGGCCATCAATCATGCAATGCCAAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGCAATGTTAATGTAGCCTCTGCCTCTTGCTTGGGGAACCATGACATGTTCTACCGTTTAGAGCCCTTATCTCCAGAAGATTCATGGACTCTGTTCTGCAGGAAGACATTTCAAGGGAACTCATGCCTTCCCAATTTGGAGGAAATTTGTCGATCCATCCTGATGAAATGCGGGGGACTGCCCCTTGTAACTGTGGCCATCAGCGCTGTACTAGCTTTAAAGGACCTGAGAAATGTGGATAATTGGGCTGCTGTTTCTGGCAGTATTGGAGCTGAAATAGAAGGAAATGATCAACTTGATAACATGAAAAAATTGCAGCATCTCAGTTACAGTGATTTACCATACCATCTGAAATCATGTTTCTTGTATCTGAGCATCTTTCCTGATCTCTACAAAATTGAGCATATGAGATTGATTAAGTTATGGTTAGCTGAAGGATTTGTTATTGGAAAAGAGGGAAGGACACCAGAAGAAGTTGCAGAGAGTTACCTTAGAGAATTATTGGACAGAAGTTTGATTCGAGCAGCAGAAACATCAGCTGAAGGGAGAGTTAAATCATATCGCATCCATGATCTTTTACGGGAGATTGTCATTTTGAAGTCTAGAGAGCAAAATGCAATAGAAAAAGAGCACGGTACAATGTGGGCTGAGAAAGTTCGACGACTATCAATAGTTAACACACTGCAGAATGCACATCAAAAGAGGATACCGTCTCAACTTCGTTCTTTGCTCGTTTTCGGGGTAGAAGATTCACTTACTGATTTTCCCATACCAAAATTGTTTCCTACAGGTGTTCAGTTGCTTACAGTATTAGACTTACAAGGTGCACATTTGGATATGTTTCCAGGAGAGGTTGTCAAGCTTCTTCTTCTCAAGTATCTTAGCTTGAGGCATACAAAGGTGAAACAAATTCAAGGCTCCATCAAGAAGCTACAAAACCTAGAGACCTTGGATCTTAAACACTCGCAAGTTGTTGAATTACCTTATGAGATTTTGAATCTCAAGCGACTTCGTCATCTCCTGGCGTATCTTTTTGAGGTTGAGTCATATGCACGCTTCAATGCCAGAAAAGGAGTTAAGGTCCCTGCAGGAATATGTGGCTTGCAATTGCTCCAAAAGCTCTGCTTTATAGAGGCAAATCAAGACAATGGTGCTTTAATGGCAGAGCTCGGGAGAATGAACCAACTAAGGAGGTTAGGCACTTTCAAGTTGAGAAAAGAAGATGGGGTCACCTTATGCTCGTCCGTCCAAAATATGACCAATCTTCGCTCGTTCTCTGTATCTTCAACAGAGAAGGACAAGATAATTGATCTTAGCCACATTTCTCGTGCTCCTCCATTTCTTCAGCGACTCTACTTGATAGGTCGTTTAGAAAAGTTACCACACTGGATTTCTTCTCTTCAAAACCAGGTCAGACTGTTTCTAAAATGGAGTCGGTTGAAGGAGGATCCTCTAGTACATCTTCAGGGTTTGCCAAACCTGGTACATCTTGAACTGCTACAAGTTTATGATGGAGGAAGCTTGCATTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAGCTACAATCAGTAACCATAGAGGAGGGAGCAATGCCTTGTCTAGAAAAGCTAATTATCCAGCGGTGTAAATTGTTGAAGAAGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGTTGGTTGAATTTTTCGATATGCCAGATGAATTGATCATGCCACTACATCCAGATGGTGGAGAAGATCATTGGAAAGTTGGTCATGTTCCAGCAGTTTATTATTCCTATTGGAGAGGTGGGGGTTGGGATGTCTATTCATTAGTCAATGAAGGGGAGAGTTCTAAATCGGGTACTTCTGCTGTGAGGAGGCTTGAACGTAGTACTCTGTGGATCGAAGGTGTAGTTTAG

Protein Analysis

715

Amino Acids

81.55

Weight (kDa)

8.44

Isoelectric Point (pI)

45.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 2 - 114 1.7e-25 NB-ARC domain
WHD_DRP PF23559 199 - 270 1.3e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 312 - 644 3.7e-42 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 117
AccB1I GGYRCC 1 cut(s) 117
AccB7I CCANNNNNTGG 2 cut(s) 34, 1976
AciI CCGC 2 cut(s) 390, 1864
AclWI GGATC 5 cut(s) 366, 1179, 1661, 1674, 2138
AcoI YGGCCR 1 cut(s) 414
AcsI RAATTY 3 cut(s) 363, 1128, 1928
AcuI CTGAAG 6 cut(s) 63, 672, 780, 1547, 1667, 1793
AfaI GTAC 7 cut(s) 119, 429, 856, 1677, 1704, 2092, 2122
AfeI AGCGCT 1 cut(s) 424
AfiI CCNNNNNNNGG 2 cut(s) 34, 1976
AflIII ACRYGT 1 cut(s) 264
AjnI CCWGG 5 cut(s) 151, 1063, 1239, 1626, 1698
Alw21I GWGCWC 4 cut(s) 852, 1048, 1389, 1552
Alw26I GTCTC 2 cut(s) 936, 1157
Alw44I GTGCAC 1 cut(s) 1044
AlwI GGATC 5 cut(s) 366, 1179, 1661, 1674, 2138
AlwNI CAGNNNCTG 1 cut(s) 34
Ama87I CYCGRG 1 cut(s) 1388
Aor51HI AGCGCT 1 cut(s) 424
AoxI GGCC 2 cut(s) 162, 414
ApaLI GTGCAC 1 cut(s) 1044
ApeKI GCWGC 4 cut(s) 103, 467, 535, 743
ApoI RAATTY 3 cut(s) 363, 1128, 1928
Asp718I GGTACC 1 cut(s) 117
AspLEI GCGC 1 cut(s) 425
AspS9I GGNCC 3 cut(s) 442, 1300, 1885
AsuHPI GGTGA 2 cut(s) 1132, 1441
AvaI CYCGRG 1 cut(s) 1388
AvaII GGWCC 3 cut(s) 442, 1300, 1885
BaeGI GKGCMC 1 cut(s) 1048
BalI TGGCCA 1 cut(s) 416
BamHI GGATCC 1 cut(s) 1666
BanI GGYRCC 1 cut(s) 117
BanII GRGCYC 2 cut(s) 285, 1389
BauI CACGAG 1 cut(s) 1545
BbsI GAAGAC 1 cut(s) 329
Bbv12I GWGCWC 4 cut(s) 852, 1048, 1389, 1552
BbvI GCAGC 4 cut(s) 90, 454, 547, 755
BccI CCATC 9 cut(s) 173, 383, 425, 573, 1148, 1436, 1724, 1897, 1967
BciT130I CCWGG 5 cut(s) 153, 1065, 1241, 1628, 1700
BciVI GTATCC 1 cut(s) 918
BclI TGATCA 3 cut(s) 3, 508, 1953
BcoDI GTCTC 2 cut(s) 936, 1157
BfaI CTAG 5 cut(s) 431, 822, 1160, 1673, 1844
BfmI CTRYAG 5 cut(s) 104, 316, 902, 1005, 1305
BfoI RGCGCY 1 cut(s) 426
BfuI GTATCC 1 cut(s) 918
BisI GCNGC 4 cut(s) 104, 468, 536, 744
BlsI GCNGC 4 cut(s) 105, 469, 537, 745
BmcAI AGTACT 1 cut(s) 2122
Bme1390I CCNGG 5 cut(s) 153, 1065, 1241, 1628, 1700
Bme18I GGWCC 3 cut(s) 442, 1300, 1885
BmeT110I CYCGRG 1 cut(s) 1388
BmgT120I GGNCC 3 cut(s) 442, 1300, 1885
BmiI GGNNCC 7 cut(s) 39, 119, 257, 1138, 1302, 1668, 1887
BmrFI CCNGG 5 cut(s) 153, 1065, 1241, 1628, 1700
BmsI GCATC 3 cut(s) 547, 603, 792
BpiI GAAGAC 1 cut(s) 329
BplI GAGNNNNNCTC 2 cut(s) 195, 227
BpmI CTGGAG 1 cut(s) 276
BpuEI CTTGAG 3 cut(s) 1076, 1126, 1205
BsaI GGTCTC 1 cut(s) 1157
BsaJI CCNNGG 2 cut(s) 63, 1167
BsaXI ACNNNNNCTCC 4 cut(s) 1059, 1089, 1284, 1314
Bsc4I CCNNNNNNNGG 2 cut(s) 34, 1976
Bse1I ACTGG 2 cut(s) 39, 1610
Bse3DI GCAATG 3 cut(s) 183, 229, 1839
BseBI CCWGG 5 cut(s) 153, 1065, 1241, 1628, 1700
BseDI CCNNGG 2 cut(s) 63, 1167
BseGI GGATG 7 cut(s) 73, 139, 375, 783, 1804, 1966, 2053
BseLI CCNNNNNNNGG 2 cut(s) 34, 1976
BseMI GCAATG 3 cut(s) 183, 229, 1839
BseMII CTCAG 4 cut(s) 437, 556, 581, 858
BseNI ACTGG 2 cut(s) 39, 1610
BseRI GAGGAG 3 cut(s) 1542, 1838, 2119
BseSI GKGCMC 1 cut(s) 1048
BseXI GCAGC 4 cut(s) 90, 454, 547, 755
BseYI CCCAGC 1 cut(s) 156
BshFI GGCC 2 cut(s) 164, 416
BshNI GGYRCC 1 cut(s) 117
BsiHKAI GWGCWC 4 cut(s) 852, 1048, 1389, 1552
BsiHKCI CYCGRG 1 cut(s) 1388
BslFI GGGAC 3 cut(s) 408, 1286, 1871
BslI CCNNNNNNNGG 2 cut(s) 34, 1976
BsmAI GTCTC 2 cut(s) 936, 1157
BsmBI CGTCTC 1 cut(s) 936
BsmFI GGGAC 3 cut(s) 408, 1286, 1871
BsmI GAATGC 1 cut(s) 913
BsnI GGCC 2 cut(s) 164, 416
Bso31I GGTCTC 1 cut(s) 1157
BsoBI CYCGRG 1 cut(s) 1388
Bsp1286I GDGCHC 5 cut(s) 285, 852, 1048, 1389, 1552
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 2 cut(s) 390, 1864
BspANI GGCC 2 cut(s) 164, 416
BspCNI CTCAG 4 cut(s) 438, 555, 582, 859
BspLI GGNNCC 7 cut(s) 39, 119, 257, 1138, 1302, 1668, 1887
BspMAI CTGCAG 4 cut(s) 108, 320, 906, 1309
BspPI GGATC 5 cut(s) 366, 1179, 1661, 1674, 2138
BspT107I GGYRCC 1 cut(s) 117
BspTNI GGTCTC 1 cut(s) 1157
BsrDI GCAATG 3 cut(s) 183, 229, 1839
BsrI ACTGG 2 cut(s) 39, 1610
BssECI CCNNGG 2 cut(s) 63, 1167
BssSI CACGAG 1 cut(s) 1545
BssT1I CCWWGG 2 cut(s) 63, 1167
Bst2BI CACGAG 1 cut(s) 1545
Bst2UI CCWGG 5 cut(s) 153, 1065, 1241, 1628, 1700
Bst4CI ACNGT 7 cut(s) 275, 412, 551, 854, 930, 1027, 1638
Bst6I CTCTTC 1 cut(s) 1623
BstC8I GCNNGC 3 cut(s) 1273, 1322, 1742
BstDEI CTNAG 9 cut(s) 80, 446, 542, 590, 710, 867, 1100, 1406, 1532
BstDSI CCRYGG 1 cut(s) 63
BstEII GGTNACC 1 cut(s) 1447
BstF5I GGATG 7 cut(s) 73, 139, 375, 783, 1804, 1966, 2053
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 1 cut(s) 425
BstMAI GTCTC 2 cut(s) 936, 1157
BstMWI GCNNNNNNNGC 4 cut(s) 422, 431, 1336, 1379
BstNI CCWGG 5 cut(s) 153, 1065, 1241, 1628, 1700
BstNSI RCATGY 1 cut(s) 268
BstPI GGTNACC 1 cut(s) 1447
BstSCI CCNGG 5 cut(s) 151, 1063, 1239, 1626, 1698
BstSFI CTRYAG 5 cut(s) 104, 316, 902, 1005, 1305
BstSLI GKGCMC 1 cut(s) 1048
BstV1I GCAGC 4 cut(s) 90, 454, 547, 755
BstV2I GAAGAC 1 cut(s) 329
BstX2I RGATCY 2 cut(s) 1171, 1666
BstYI RGATCY 2 cut(s) 1171, 1666
BsuI GTATCC 1 cut(s) 918
BsuRI GGCC 2 cut(s) 164, 416
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 7 cut(s) 73, 139, 375, 783, 1804, 1966, 2053
BtsI GCAGTG 1 cut(s) 899
BtsIMutI CAGTG 3 cut(s) 556, 899, 1603
Cac8I GCNNGC 3 cut(s) 1273, 1322, 1742
CaiI CAGNNNCTG 1 cut(s) 34
CfoI GCGC 1 cut(s) 425
Cfr13I GGNCC 3 cut(s) 442, 1300, 1885
CsiI ACCWGGT 2 cut(s) 1626, 1698
Csp6I GTAC 7 cut(s) 118, 428, 855, 1676, 1703, 2091, 2121
CspCI CAANNNNNGTGG 2 cut(s) 175, 210
CviQI GTAC 7 cut(s) 118, 428, 855, 1676, 1703, 2091, 2121
DdeI CTNAG 9 cut(s) 80, 446, 542, 590, 710, 867, 1100, 1406, 1532
DraI TTTAAA 2 cut(s) 438, 1917
EaeI YGGCCR 1 cut(s) 414
Eam1104I CTCTTC 1 cut(s) 1623
EarI CTCTTC 1 cut(s) 1623
Ecl136II GAGCTC 1 cut(s) 1387
Eco130I CCWWGG 2 cut(s) 63, 1167
Eco24I GRGCYC 2 cut(s) 285, 1389
Eco31I GGTCTC 1 cut(s) 1157
Eco47I GGWCC 3 cut(s) 442, 1300, 1885
Eco47III AGCGCT 1 cut(s) 424
Eco53kI GAGCTC 1 cut(s) 1387
Eco57I CTGAAG 6 cut(s) 63, 672, 780, 1547, 1667, 1793
Eco88I CYCGRG 1 cut(s) 1388
Eco91I GGTNACC 1 cut(s) 1447
EcoICRI GAGCTC 1 cut(s) 1387
EcoO109I RGGNCCY 3 cut(s) 442, 1300, 1885
EcoO65I GGTNACC 1 cut(s) 1447
EcoRII CCWGG 5 cut(s) 151, 1063, 1239, 1626, 1698
EcoT14I CCWWGG 2 cut(s) 63, 1167
EcoT38I GRGCYC 2 cut(s) 285, 1389
ErhI CCWWGG 2 cut(s) 63, 1167
Esp3I CGTCTC 1 cut(s) 936
FalI AAGNNNNNCTT 4 cut(s) 957, 989, 1328, 1360
FaqI GGGAC 3 cut(s) 408, 1286, 1871
FauI CCCGC 1 cut(s) 383
FauNDI CATATG 2 cut(s) 624, 1267
FbaI TGATCA 3 cut(s) 3, 508, 1953
Fnu4HI GCNGC 4 cut(s) 104, 468, 536, 744
FokI GGATG 7 cut(s) 80, 146, 362, 770, 1811, 1953, 2060
FriOI GRGCYC 2 cut(s) 285, 1389
Fsp4HI GCNGC 4 cut(s) 104, 468, 536, 744
FspBI CTAG 5 cut(s) 431, 822, 1160, 1673, 1844
GlaI GCGC 1 cut(s) 424
GluI GCNGC 4 cut(s) 104, 468, 536, 744
GsaI CCCAGC 1 cut(s) 160
GsuI CTGGAG 1 cut(s) 276
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 2 cut(s) 164, 416
HhaI GCGC 1 cut(s) 425
Hin6I GCGC 1 cut(s) 423
HinP1I GCGC 1 cut(s) 423
HincII GTYRAC 1 cut(s) 895
HindII GTYRAC 1 cut(s) 895
HindIII AAGCTT 2 cut(s) 1079, 1738
HinfI GANTC 8 cut(s) 299, 307, 736, 968, 1216, 1262, 1569, 1651
HpaI GTTAAC 1 cut(s) 895
HphI GGTGA 2 cut(s) 1132, 1441
Hpy166II GTNNAC 2 cut(s) 895, 1046
Hpy188I TCNGA 4 cut(s) 570, 591, 1634, 1773
Hpy8I GTNNAC 2 cut(s) 895, 1046
Hpy99I CGWCG 1 cut(s) 882
HpyCH4III ACNGT 7 cut(s) 275, 412, 551, 854, 930, 1027, 1638
HpyCH4IV ACGT 1 cut(s) 2116
HpyF10VI GCNNNNNNNGC 4 cut(s) 422, 431, 1336, 1379
HpyF3I CTNAG 9 cut(s) 80, 446, 542, 590, 710, 867, 1100, 1406, 1532
HpySE526I ACGT 1 cut(s) 2116
HspAI GCGC 1 cut(s) 423
KpnI GGTACC 1 cut(s) 121
Ksp22I TGATCA 3 cut(s) 3, 508, 1953
KspAI GTTAAC 1 cut(s) 895
LmnI GCTCC 5 cut(s) 488, 1142, 1335, 1555, 1829
Lsp1109I GCAGC 4 cut(s) 90, 454, 547, 755
LweI GCATC 3 cut(s) 547, 603, 792
MabI ACCWGGT 2 cut(s) 1626, 1698
MaeI CTAG 5 cut(s) 431, 822, 1160, 1673, 1844
MaeII ACGT 1 cut(s) 2116
MaeIII GTNAC 6 cut(s) 406, 545, 704, 1447, 1596, 1813
MfeI CAATTG 1 cut(s) 1325
MflI RGATCY 2 cut(s) 1171, 1666
MhlI GDGCHC 5 cut(s) 285, 852, 1048, 1389, 1552
MlsI TGGCCA 1 cut(s) 416
MluNI TGGCCA 1 cut(s) 416
MlyI GAGTC 4 cut(s) 301, 1271, 1563, 1660
Mox20I TGGCCA 1 cut(s) 416
MscI TGGCCA 1 cut(s) 416
MslI CAYNNNNRTG 2 cut(s) 380, 1971
Msp20I TGGCCA 1 cut(s) 416
MspA1I CMGCKG 2 cut(s) 758, 1864
MspR9I CCNGG 5 cut(s) 153, 1065, 1241, 1628, 1700
MunI CAATTG 1 cut(s) 1325
Mva1269I GAATGC 1 cut(s) 913
MvaI CCWGG 5 cut(s) 153, 1065, 1241, 1628, 1700
MwoI GCNNNNNNNGC 4 cut(s) 422, 431, 1336, 1379
NcoI CCATGG 1 cut(s) 63
NdeI CATATG 2 cut(s) 624, 1267
NlaIV GGNNCC 7 cut(s) 39, 119, 257, 1138, 1302, 1668, 1887
NmuCI GTSAC 1 cut(s) 1447
NspI RCATGY 1 cut(s) 268
PciI ACATGT 1 cut(s) 264
PcsI WCGNNNNNNNCGW 1 cut(s) 199
PctI GAATGC 1 cut(s) 913
PfeI GAWTC 4 cut(s) 299, 736, 968, 1216
PflFI GACNNNGTC 1 cut(s) 1230
PflMI CCANNNNNTGG 2 cut(s) 34, 1976
PfoI TCCNGGA 1 cut(s) 1063
PkrI GCNGC 4 cut(s) 105, 469, 537, 745
PleI GAGTC 4 cut(s) 301, 1270, 1563, 1659
PpsI GAGTC 4 cut(s) 301, 1270, 1563, 1659
PpuMI RGGWCCY 3 cut(s) 442, 1300, 1885
PscI ACATGT 1 cut(s) 264
Psp124BI GAGCTC 1 cut(s) 1389
Psp5II RGGWCCY 3 cut(s) 442, 1300, 1885
Psp6I CCWGG 5 cut(s) 151, 1063, 1239, 1626, 1698
PspEI GGTNACC 1 cut(s) 1447
PspFI CCCAGC 1 cut(s) 156
PspGI CCWGG 5 cut(s) 151, 1063, 1239, 1626, 1698
PspN4I GGNNCC 7 cut(s) 39, 119, 257, 1138, 1302, 1668, 1887
PspPI GGNCC 3 cut(s) 442, 1300, 1885
PspPPI RGGWCCY 3 cut(s) 442, 1300, 1885
PstI CTGCAG 4 cut(s) 108, 320, 906, 1309
PstNI CAGNNNCTG 1 cut(s) 34
PsuI RGATCY 2 cut(s) 1171, 1666
PsyI GACNNNGTC 1 cut(s) 1230
PvuII CAGCTG 1 cut(s) 758
RsaI GTAC 7 cut(s) 119, 429, 856, 1677, 1704, 2092, 2122
RsaNI GTAC 7 cut(s) 118, 428, 855, 1676, 1703, 2091, 2121
RseI CAYNNNNRTG 2 cut(s) 380, 1971
SacI GAGCTC 1 cut(s) 1389
SatI GCNGC 4 cut(s) 104, 468, 536, 744
Sau96I GGNCC 3 cut(s) 442, 1300, 1885
SbfI CCTGCAGG 1 cut(s) 1309
ScaI AGTACT 1 cut(s) 2122
SchI GAGTC 4 cut(s) 301, 1271, 1563, 1660
ScrFI CCNGG 5 cut(s) 153, 1065, 1241, 1628, 1700
SdaI CCTGCAGG 1 cut(s) 1309
SduI GDGCHC 5 cut(s) 285, 852, 1048, 1389, 1552
SexAI ACCWGGT 2 cut(s) 1626, 1698
SfaNI GCATC 3 cut(s) 547, 603, 792
SfcI CTRYAG 5 cut(s) 104, 316, 902, 1005, 1305
SinI GGWCC 3 cut(s) 442, 1300, 1885
SmiMI CAYNNNNRTG 2 cut(s) 380, 1971
SmlI CTYRAG 3 cut(s) 1091, 1105, 1220
SmoI CTYRAG 3 cut(s) 1091, 1105, 1220
Sse8387I CCTGCAGG 1 cut(s) 1309
SsiI CCGC 2 cut(s) 390, 1864
SspMI CTAG 5 cut(s) 431, 822, 1160, 1673, 1844
SstI GAGCTC 1 cut(s) 1389
StyD4I CCNGG 5 cut(s) 151, 1063, 1239, 1626, 1698
StyI CCWWGG 2 cut(s) 63, 1167
TaaI ACNGT 7 cut(s) 275, 412, 551, 854, 930, 1027, 1638
TaiI ACGT 1 cut(s) 2119
TaqI TCGA 6 cut(s) 202, 370, 739, 877, 1935, 2133
TatI WGTACW 3 cut(s) 427, 1675, 2120
TfiI GAWTC 4 cut(s) 299, 736, 968, 1216
TscAI CASTG 3 cut(s) 556, 906, 1610
TseFI GTSAC 1 cut(s) 1447
TseI GCWGC 4 cut(s) 103, 467, 535, 743
Tsp45I GTSAC 1 cut(s) 1447
TspDTI ATGAA 8 cut(s) 63, 291, 398, 539, 1412, 1962, 2046, 2082
TspGWI ACGGA 1 cut(s) 1453
TspRI CASTG 3 cut(s) 556, 906, 1610
Tth111I GACNNNGTC 1 cut(s) 1230
Van91I CCANNNNNTGG 2 cut(s) 34, 1976
VneI GTGCAC 1 cut(s) 1044
VpaK11BI GGWCC 3 cut(s) 442, 1300, 1885
XapI RAATTY 3 cut(s) 363, 1128, 1928
XbaI TCTAGA 2 cut(s) 821, 1843
XceI RCATGY 1 cut(s) 268
XcmI CCANNNNNNNNNTGG 2 cut(s) 300, 1918
XspI CTAG 5 cut(s) 431, 822, 1160, 1673, 1844
ZrmI AGTACT 1 cut(s) 2122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.