Rh7BG263100

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
24026139 .. 24029156
3018 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG263100.1

Sequence Viewer

Length: 3018 bp
ATGGTTTCCACAAAACCTTTAAAAACAGAAGAAGGCTACACCATGAAAGATCATTCAACAATATCAACTGAAATACCACATACAAAGTTTTCTTCTCTCCTACCACAAATATATCATCTATCCTCAGAAACACAAACAAACCTGCAAGTGCTATCAGGTAAAGAAATGGCAGAAAGTGCAGTCACCTATTTGGTTGACAGGCTCACGACATTACTTGAAGAAGAGGTGAAACTTTTGTCAGGGATCCAAGAACAGGTCGAGGACCTGGTTGATGAATTGGAGCGCATCAAGGCCTTCTTAAGAGTTGCTGATGCAAAGGAAGACAGCAATCCTCAGCTCAAAGTGTGGGTTAAACAAGTCAGAGATGTAGCTCATGAAATGGAAGATGCCCTTGATAAATTCAGGCTTTTCCATTCACACAATCACGGTCATGGATTCCAAGCTTCCGTTCATAAGCTTTCTTGTATCATCAAGAAATGGAAAGCTAACCATCAAATTTCTGCTGATATTCAAAGAATAAACTCAAAAGTCAAAAACCTCTATGAGGGACATGAGAGATACAAACCTGTTGACCAAGCTGGTTCCAGCTCTGCTCGTCCGGTTCAGCGCCACAAGTTTGATCAAGGGGATGCCCCTTTACTGGAAGAGGCTGATCTTGTGGCAATTGGTGAGCGCAAAAGGCAACTGATTGAGTTGCTAATGAAGGAAGACACTGGACGCCTGGTGGTTCCAGTAGTTGGGATGGGTGGACTGGGGAAAACTACCTTGGTAAAGCAAGTCTACGAGGATCCAAAAGTTCAGAAACGTTTCAAGGTACATGCTTGGATCACTGTTTCTCGATCATTCAAGATAAATCAGCTCCTAAGACACATGATCAATAATATCTTCAAAGTTATCAGGAAACCGGTTCCTGAAGATGATGAAGTTGAAACCATGGATGACAACCAGCTAAGAGAGAGAATCAAAAATTTGCTGCAGAATAGTAGGTACCTGATTGTTCTTGATGGTATATGGCACATACCGGACTGGGATGCCATCAATCATGTAATGCCGAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGATATGTTAATGTGGCCTCTGCCTCTTGCTTGGGGAACCAGGACATGTTCTACCGTTTAGAGCCCTTATCTCCGGAAGATTCATGGACTCTTTTCTGCAGGAAGACATTTCAAGGGAGCTCATGCCTTCCAAATTTGGAGGAAATTTGTCAATCCATCCTGGTGAAATGCGGGGGACTGCCCCTTGCAATTGTGGCCATCAGCGCTGTACTAGCTTTAAAAGACAAGAGAAATGTGGATGATTGGGCTGCTGTTTCTGGCAGTATTGGAGCTGAAATAGAAGGAAATGATCAACTTGACAACATGAAAAAATTGCTGTCTCTCAGTTACAGGGATTTACCATACCATCTGAAATCTTGTTTCTTGTATCTGAGCATCTTTCCTGATCTCTACAAAATTGAGCATATGAGATTAATTCGGTTATGGTTAGCTGAAGGATTTGTTATTGGAAAAGAGGGAAGGACACCAGAAGAAGTTGCAGAGAGTTACCTTCGAGAGTTATTGGACAGAAATTTGATTCAAGCAGCAGAAACGTCAACTGATGGGAGAGTTAAATCATATCGCATCCATGATCTTTTACGGGAGATTGTCATTTTGAAGTCTAAAGAGCAAAACTTTGCAGCAATAGAAAAAGATCAAGGTACAATGTGGCCTGATGAGAAAGTTCGAAGACTATCAATAGTCAACACGCTGCAGAATATACATCAAAAGAGGACACCATCCCGACTTCGTTCTTTGCTCGTTTTTGGGGTAGAAGATTCACTTACTGATTTTCCCATACCAAAATTGTTTCCTACCGGTCTTCAGTTGCTTACTGTATTAGACTTAGAAGGTGCACATCTGAAGAAGTTTCCAAATGAGGTTGTCAAGCTTCTTCTTCTCAAGTACCTTAGCTTGAGGCATACAGAGGTGAAAGAAATTCCAAGCTCCATCAAGAAGCTACAAAACCTAGAGACCTTGGACCTTAAACACTCGCATGTTGTTGAATTACCTGCTGAGATTTTGAATCTCAAGCGACTTCGTCATCTCCTGGTTTATCGTTATGAGGTTGAGTCATATGCACGATTTAATGCCAGAAAAGGAGTTAAGGTTCCTGCAGGGATATCTGGCTTGCAATCGCTCCAAAAGCTCTGCTTTATAGAGGCAAATCAAGGCAATGGTGCTTTAATGGCAGAGCTTGGGAGAATGGACCAACTAAGGAGGTTAGGCATTTACAAGTTGAGAGAAGAAGATGGGGCCACCTTATGCTCATCCGTCCAAAATATGACCAGCCTTCGCTCGTTGTCTGTATTTTCAGCAGAGAAAGAGAAGATAATTGATCTTAGCCACATTTCTCGTGCTCCTCCATTTCTTCAGCGACTATACTTGGCAGGGCGTTTAGAAAACTTACCCCACTGGATTTCTTCTCTTCAAAACCTGGTCAGACTGTTTCTAAAATGGAGTCGGCTGAAGGAGGATCCTCTAGTACATCTTCAGGGTTTGCCAAACCTCGTACATCTTGAACTTTTACAGGTTTATGATGGAGAAAGCTTGCACTTTGAGGCAGGAGGGTTTCCGAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATTGGTAACCATAGAGGAGGGAGCAATGCCTTGTCTAGAAAAGCTAATTATCCAGCGCTGCAAATGCTTGAAGAAGGTTCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAGTTTTTTGATATGCCAGATGAATTAATCATGCCACTACATCCACATGGTGGAGAAGATCACTGGAAAGTCGCTCATGTTCCAGCAGTTTATTATTCCTATTGGAGAGGTGGAGGTTGGGACGTCTATTCATTAGTCAATGATGTGGAGAGTTTTAATTCGGGTACTTCTGCCGTGAGGAGGCTCGAACGTAATATTCTATGGAAGGTATAG

Protein Analysis

1005

Amino Acids

114.88

Weight (kDa)

7.88

Isoelectric Point (pI)

42.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 60 - 142 2.7e-25 Rx N-terminal domain
NB-ARC PF00931 225 - 404 3.4e-43 NB-ARC domain
WHD_DRP PF23559 489 - 560 3.8e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 606 - 935 4.6e-49 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2931
Acc36I ACCTGC 2 cut(s) 150, 2089
Acc65I GGTACC 1 cut(s) 987
AccB1I GGYRCC 1 cut(s) 987
AccB7I CCANNNNNTGG 2 cut(s) 737, 2855
AccI GTMKAC 1 cut(s) 780
AccIII TCCGGA 1 cut(s) 1162
AciI CCGC 1 cut(s) 1260
AclI AACGTT 1 cut(s) 805
AclWI GGATC 7 cut(s) 238, 251, 782, 795, 833, 2540, 2553
AcoI YGGCCR 1 cut(s) 1284
AcsI RAATTY 7 cut(s) 398, 495, 967, 1222, 1233, 1600, 2007
AcuI CTGAAG 8 cut(s) 933, 1542, 1877, 1952, 2426, 2546, 2558, 2672
AcyI GRCGYC 2 cut(s) 718, 2928
AdeI CACNNNGTG 1 cut(s) 2855
AfaI GTAC 8 cut(s) 816, 989, 1299, 1732, 1976, 2556, 2583, 2971
AfeI AGCGCT 2 cut(s) 1294, 2744
AfiI CCNNNNNNNGG 6 cut(s) 253, 544, 640, 737, 2855, 2985
AflII CTTAAG 1 cut(s) 298
AflIII ACRYGT 1 cut(s) 1134
AgeI ACCGGT 2 cut(s) 904, 1886
AjnI CCWGG 6 cut(s) 264, 720, 1128, 1248, 2118, 2505
AjuI GAANNNNNNNTTGG 4 cut(s) 432, 464, 749, 781
AloI GAACNNNNNNTCC 2 cut(s) 2163, 2195
Alw21I GWGCWC 3 cut(s) 1211, 1927, 2431
Alw26I GTCTC 2 cut(s) 1413, 2036
Alw44I GTGCAC 1 cut(s) 1923
AlwI GGATC 7 cut(s) 238, 251, 782, 795, 833, 2540, 2553
Aor13HI TCCGGA 1 cut(s) 1162
Aor51HI AGCGCT 2 cut(s) 1294, 2744
AoxI GGCC 5 cut(s) 291, 1104, 1284, 1739, 2325
ApaLI GTGCAC 1 cut(s) 1923
ApeKI GCWGC 7 cut(s) 973, 1337, 1613, 1709, 1780, 2745, 2800
ApoI RAATTY 7 cut(s) 398, 495, 967, 1222, 1233, 1600, 2007
AseI ATTAAT 2 cut(s) 1502, 2831
AsiGI ACCGGT 2 cut(s) 904, 1886
Asp700I GAANNNNTTC 1 cut(s) 806
Asp718I GGTACC 1 cut(s) 987
AspLEI GCGC 5 cut(s) 285, 609, 675, 1295, 2745
AspS9I GGNCC 4 cut(s) 262, 2050, 2278, 2325
AsuHPI GGTGA 5 cut(s) 175, 238, 680, 1264, 2011
AsuII TTCGAA 1 cut(s) 1756
AvaII GGWCC 3 cut(s) 262, 2050, 2278
BaeGI GKGCMC 1 cut(s) 1927
BalI TGGCCA 1 cut(s) 1286
BamHI GGATCC 3 cut(s) 243, 787, 2545
BanI GGYRCC 1 cut(s) 987
BanII GRGCYC 2 cut(s) 1155, 1211
BauI CACGAG 1 cut(s) 2424
BbsI GAAGAC 5 cut(s) 327, 714, 1199, 1765, 1883
Bbv12I GWGCWC 3 cut(s) 1211, 1927, 2431
BbvCI CCTCAGC 1 cut(s) 333
BbvI GCAGC 7 cut(s) 960, 1324, 1625, 1721, 1767, 2732, 2787
BceAI ACGGC 1 cut(s) 2963
BciT130I CCWGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
BclI TGATCA 3 cut(s) 619, 873, 1378
BcoDI GTCTC 2 cut(s) 1413, 2036
BfaI CTAG 4 cut(s) 1301, 2039, 2552, 2723
BfmI CTRYAG 4 cut(s) 974, 1186, 1781, 2184
BfoI RGCGCY 3 cut(s) 610, 1296, 2746
BfrI CTTAAG 1 cut(s) 298
BfuAI ACCTGC 2 cut(s) 150, 2089
BisI GCNGC 7 cut(s) 974, 1338, 1614, 1710, 1781, 2746, 2801
BlsI GCNGC 7 cut(s) 975, 1339, 1615, 1711, 1782, 2747, 2802
Bme1390I CCNGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
Bme18I GGWCC 3 cut(s) 262, 2050, 2278
BmgT120I GGNCC 4 cut(s) 262, 2050, 2278, 2325
BmrFI CCNGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
BmrI ACTGGG 2 cut(s) 761, 1036
BmsI GCATC 7 cut(s) 294, 301, 376, 619, 1021, 1473, 1662
BmuI ACTGGG 2 cut(s) 761, 1036
BpiI GAAGAC 5 cut(s) 327, 714, 1199, 1765, 1883
BplI GAGNNNNNCTC 2 cut(s) 1065, 1097
Bpu10I CCTNAGC 2 cut(s) 333, 1979
Bpu14I TTCGAA 1 cut(s) 1756
BpuEI CTTGAG 4 cut(s) 1955, 2005, 2084, 2825
BsaHI GRCGYC 2 cut(s) 718, 2928
BsaI GGTCTC 1 cut(s) 2036
BsaJI CCNNGG 3 cut(s) 765, 933, 2046
BsaWI WCCGGW 5 cut(s) 598, 904, 1021, 1162, 1886
BsaXI ACNNNNNCTCC 2 cut(s) 2163, 2193
Bsc4I CCNNNNNNNGG 6 cut(s) 253, 544, 640, 737, 2855, 2985
Bse118I RCCGGY 2 cut(s) 904, 1886
Bse1I ACTGG 7 cut(s) 645, 718, 731, 756, 1031, 2489, 2873
Bse3DI GCAATG 2 cut(s) 2251, 2718
BseAI TCCGGA 1 cut(s) 1162
BseBI CCWGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
BseDI CCNNGG 3 cut(s) 765, 933, 2046
BseLI CCNNNNNNNGG 6 cut(s) 253, 544, 640, 737, 2855, 2985
BseMI GCAATG 2 cut(s) 2251, 2718
BseMII CTCAG 5 cut(s) 138, 347, 1426, 1451, 2076
BseNI ACTGG 7 cut(s) 645, 718, 731, 756, 1031, 2489, 2873
BseRI GAGGAG 3 cut(s) 2421, 2717, 2998
BseSI GKGCMC 1 cut(s) 1927
BseXI GCAGC 7 cut(s) 960, 1324, 1625, 1721, 1767, 2732, 2787
BsgI GTGCAG 1 cut(s) 198
BshFI GGCC 5 cut(s) 293, 1106, 1286, 1741, 2327
BshNI GGYRCC 1 cut(s) 987
BshTI ACCGGT 2 cut(s) 904, 1886
BsiHKAI GWGCWC 3 cut(s) 1211, 1927, 2431
BsiSI CCGG 5 cut(s) 599, 905, 1022, 1163, 1887
BslFI GGGAC 3 cut(s) 561, 1278, 2939
BslI CCNNNNNNNGG 6 cut(s) 253, 544, 640, 737, 2855, 2985
BsmAI GTCTC 2 cut(s) 1413, 2036
BsmFI GGGAC 3 cut(s) 561, 1278, 2939
BsnI GGCC 5 cut(s) 293, 1106, 1286, 1741, 2327
Bso31I GGTCTC 1 cut(s) 2036
Bsp119I TTCGAA 1 cut(s) 1756
Bsp1286I GDGCHC 4 cut(s) 1155, 1211, 1927, 2431
Bsp13I TCCGGA 1 cut(s) 1162
Bsp19I CCATGG 1 cut(s) 933
BspACI CCGC 1 cut(s) 1260
BspANI GGCC 5 cut(s) 293, 1106, 1286, 1741, 2327
BspCNI CTCAG 5 cut(s) 137, 346, 1425, 1452, 2077
BspEI TCCGGA 1 cut(s) 1162
BspHI TCATGA 1 cut(s) 373
BspMAI CTGCAG 4 cut(s) 978, 1190, 1785, 2188
BspMI ACCTGC 2 cut(s) 150, 2089
BspPI GGATC 7 cut(s) 238, 251, 782, 795, 833, 2540, 2553
BspT104I TTCGAA 1 cut(s) 1756
BspT107I GGYRCC 1 cut(s) 987
BspTI CTTAAG 1 cut(s) 298
BspTNI GGTCTC 1 cut(s) 2036
BsrDI GCAATG 2 cut(s) 2251, 2718
BsrFI RCCGGY 2 cut(s) 904, 1886
BsrI ACTGG 7 cut(s) 645, 718, 731, 756, 1031, 2489, 2873
BssAI RCCGGY 2 cut(s) 904, 1886
BssECI CCNNGG 3 cut(s) 765, 933, 2046
BssNI GRCGYC 2 cut(s) 718, 2928
BssSI CACGAG 1 cut(s) 2424
BssT1I CCWWGG 3 cut(s) 765, 933, 2046
Bst2BI CACGAG 1 cut(s) 2424
Bst2UI CCWGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
Bst4CI ACNGT 5 cut(s) 428, 832, 1145, 1906, 2517
Bst6I CTCTTC 3 cut(s) 216, 639, 2502
BstACI GRCGYC 2 cut(s) 718, 2928
BstAFI CTTAAG 1 cut(s) 298
BstAPI GCANNNNNTGC 1 cut(s) 176
BstBI TTCGAA 1 cut(s) 1756
BstC8I GCNNGC 2 cut(s) 2201, 2621
BstDSI CCRYGG 1 cut(s) 933
BstEII GGTNACC 1 cut(s) 2692
BstENI CCTNNNNNAGG 1 cut(s) 542
BstH2I RGCGCY 3 cut(s) 610, 1296, 2746
BstHHI GCGC 5 cut(s) 285, 609, 675, 1295, 2745
BstMAI GTCTC 2 cut(s) 1413, 2036
BstMWI GCNNNNNNNGC 8 cut(s) 176, 679, 1283, 1292, 1301, 2215, 2258, 2751
BstNI CCWGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
BstNSI RCATGY 3 cut(s) 821, 1138, 2069
BstPI GGTNACC 1 cut(s) 2692
BstSCI CCNGG 6 cut(s) 264, 720, 1128, 1248, 2118, 2505
BstSFI CTRYAG 4 cut(s) 974, 1186, 1781, 2184
BstSLI GKGCMC 1 cut(s) 1927
BstV1I GCAGC 7 cut(s) 960, 1324, 1625, 1721, 1767, 2732, 2787
BstV2I GAAGAC 5 cut(s) 327, 714, 1199, 1765, 1883
BstX2I RGATCY 3 cut(s) 243, 787, 2545
BstYI RGATCY 3 cut(s) 243, 787, 2545
BsuRI GGCC 5 cut(s) 293, 1106, 1286, 1741, 2327
BtgI CCRYGG 1 cut(s) 933
BtsIMutI CAGTG 4 cut(s) 711, 828, 2482, 2866
BveI ACCTGC 2 cut(s) 150, 2089
Cac8I GCNNGC 2 cut(s) 2201, 2621
CciI TCATGA 1 cut(s) 373
CfoI GCGC 5 cut(s) 285, 609, 675, 1295, 2745
Cfr10I RCCGGY 2 cut(s) 904, 1886
Cfr13I GGNCC 4 cut(s) 262, 2050, 2278, 2325
CseI GACGC 1 cut(s) 726
CsiI ACCWGGT 2 cut(s) 264, 2505
Csp6I GTAC 8 cut(s) 815, 988, 1298, 1731, 1975, 2555, 2582, 2970
CspAI ACCGGT 2 cut(s) 904, 1886
CspCI CAANNNNNGTGG 2 cut(s) 1045, 1080
CviQI GTAC 8 cut(s) 815, 988, 1298, 1731, 1975, 2555, 2582, 2970
DraI TTTAAA 3 cut(s) 21, 1308, 2796
DraIII CACNNNGTG 1 cut(s) 2855
EaeI YGGCCR 1 cut(s) 1284
Eam1104I CTCTTC 3 cut(s) 216, 639, 2502
EarI CTCTTC 3 cut(s) 216, 639, 2502
Ecl136II GAGCTC 1 cut(s) 1209
Eco130I CCWWGG 3 cut(s) 765, 933, 2046
Eco147I AGGCCT 1 cut(s) 293
Eco24I GRGCYC 2 cut(s) 1155, 1211
Eco31I GGTCTC 1 cut(s) 2036
Eco32I GATATC 1 cut(s) 2193
Eco47I GGWCC 3 cut(s) 262, 2050, 2278
Eco47III AGCGCT 2 cut(s) 1294, 2744
Eco53kI GAGCTC 1 cut(s) 1209
Eco57I CTGAAG 8 cut(s) 933, 1542, 1877, 1952, 2426, 2546, 2558, 2672
Eco91I GGTNACC 1 cut(s) 2692
EcoICRI GAGCTC 1 cut(s) 1209
EcoNI CCTNNNNNAGG 1 cut(s) 542
EcoO109I RGGNCCY 1 cut(s) 262
EcoO65I GGTNACC 1 cut(s) 2692
EcoRII CCWGG 6 cut(s) 264, 720, 1128, 1248, 2118, 2505
EcoRV GATATC 1 cut(s) 2193
EcoT14I CCWWGG 3 cut(s) 765, 933, 2046
EcoT38I GRGCYC 2 cut(s) 1155, 1211
ErhI CCWWGG 3 cut(s) 765, 933, 2046
FalI AAGNNNNNCTT 8 cut(s) 281, 313, 375, 407, 1836, 1868, 2207, 2239
FaqI GGGAC 3 cut(s) 561, 1278, 2939
FauI CCCGC 1 cut(s) 1253
FauNDI CATATG 2 cut(s) 1494, 2146
FbaI TGATCA 3 cut(s) 619, 873, 1378
FblI GTMKAC 1 cut(s) 780
Fnu4HI GCNGC 7 cut(s) 974, 1338, 1614, 1710, 1781, 2746, 2801
FriOI GRGCYC 2 cut(s) 1155, 1211
Fsp4HI GCNGC 7 cut(s) 974, 1338, 1614, 1710, 1781, 2746, 2801
FspBI CTAG 4 cut(s) 1301, 2039, 2552, 2723
GlaI GCGC 5 cut(s) 284, 608, 674, 1294, 2744
GluI GCNGC 7 cut(s) 974, 1338, 1614, 1710, 1781, 2746, 2801
HaeII RGCGCY 3 cut(s) 610, 1296, 2746
HaeIII GGCC 5 cut(s) 293, 1106, 1286, 1741, 2327
HapII CCGG 5 cut(s) 599, 905, 1022, 1163, 1887
HgaI GACGC 1 cut(s) 726
HhaI GCGC 5 cut(s) 285, 609, 675, 1295, 2745
Hin1I GRCGYC 2 cut(s) 718, 2928
Hin6I GCGC 5 cut(s) 283, 607, 673, 1293, 2743
HinP1I GCGC 5 cut(s) 283, 607, 673, 1293, 2743
HincII GTYRAC 4 cut(s) 196, 571, 1626, 1774
HindII GTYRAC 4 cut(s) 196, 571, 1626, 1774
HindIII AAGCTT 4 cut(s) 441, 455, 1958, 2617
HpaII CCGG 5 cut(s) 599, 905, 1022, 1163, 1887
HphI GGTGA 5 cut(s) 175, 238, 680, 1264, 2011
Hpy166II GTNNAC 7 cut(s) 196, 571, 749, 781, 1626, 1774, 1925
Hpy188I TCNGA 9 cut(s) 127, 362, 801, 1440, 1461, 1932, 2513, 2646, 2652
Hpy8I GTNNAC 7 cut(s) 196, 571, 749, 781, 1626, 1774, 1925
HpyCH4III ACNGT 5 cut(s) 428, 832, 1145, 1906, 2517
HpyCH4IV ACGT 4 cut(s) 805, 1622, 2928, 2995
HpyF10VI GCNNNNNNNGC 8 cut(s) 176, 679, 1283, 1292, 1301, 2215, 2258, 2751
HpySE526I ACGT 4 cut(s) 805, 1622, 2928, 2995
Hsp92I GRCGYC 2 cut(s) 718, 2928
HspAI GCGC 5 cut(s) 283, 607, 673, 1293, 2743
Kpn2I TCCGGA 1 cut(s) 1162
KpnI GGTACC 1 cut(s) 991
Ksp22I TGATCA 3 cut(s) 619, 873, 1378
LmnI GCTCC 8 cut(s) 280, 864, 1206, 1358, 2021, 2214, 2434, 2708
Lsp1109I GCAGC 7 cut(s) 960, 1324, 1625, 1721, 1767, 2732, 2787
LweI GCATC 7 cut(s) 294, 301, 376, 619, 1021, 1473, 1662
MabI ACCWGGT 2 cut(s) 264, 2505
MaeI CTAG 4 cut(s) 1301, 2039, 2552, 2723
MaeII ACGT 4 cut(s) 805, 1622, 2928, 2995
MaeIII GTNAC 4 cut(s) 181, 1415, 1574, 2692
MfeI CAATTG 3 cut(s) 663, 1278, 2687
MflI RGATCY 3 cut(s) 243, 787, 2545
MhlI GDGCHC 4 cut(s) 1155, 1211, 1927, 2431
MlsI TGGCCA 1 cut(s) 1286
MluNI TGGCCA 1 cut(s) 1286
MlyI GAGTC 4 cut(s) 1171, 2150, 2539, 2656
Mox20I TGGCCA 1 cut(s) 1286
MroI TCCGGA 1 cut(s) 1162
MroXI GAANNNNTTC 1 cut(s) 806
MscI TGGCCA 1 cut(s) 1286
MslI CAYNNNNRTG 4 cut(s) 429, 1250, 2064, 2850
Msp20I TGGCCA 1 cut(s) 1286
MspCI CTTAAG 1 cut(s) 298
MspI CCGG 5 cut(s) 599, 905, 1022, 1163, 1887
MspR9I CCNGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
MunI CAATTG 3 cut(s) 663, 1278, 2687
MvaI CCWGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
MwoI GCNNNNNNNGC 8 cut(s) 176, 679, 1283, 1292, 1301, 2215, 2258, 2751
NcoI CCATGG 1 cut(s) 933
NdeI CATATG 2 cut(s) 1494, 2146
NmuCI GTSAC 1 cut(s) 181
NspI RCATGY 3 cut(s) 821, 1138, 2069
NspV TTCGAA 1 cut(s) 1756
PagI TCATGA 1 cut(s) 373
PceI AGGCCT 1 cut(s) 293
PciI ACATGT 1 cut(s) 1134
PcsI WCGNNNNNNNCGW 1 cut(s) 1069
PdmI GAANNNNTTC 1 cut(s) 806
PfeI GAWTC 6 cut(s) 435, 960, 1169, 1606, 1847, 2095
PflFI GACNNNGTC 1 cut(s) 2109
PflMI CCANNNNNTGG 2 cut(s) 737, 2855
PinAI ACCGGT 2 cut(s) 904, 1886
PkrI GCNGC 7 cut(s) 975, 1339, 1615, 1711, 1782, 2747, 2802
PleI GAGTC 4 cut(s) 1171, 2149, 2538, 2655
PpsI GAGTC 4 cut(s) 1171, 2149, 2538, 2655
PpuMI RGGWCCY 1 cut(s) 262
PscI ACATGT 1 cut(s) 1134
PshBI ATTAAT 2 cut(s) 1502, 2831
Psp124BI GAGCTC 1 cut(s) 1211
Psp1406I AACGTT 1 cut(s) 805
Psp5II RGGWCCY 1 cut(s) 262
Psp6I CCWGG 6 cut(s) 264, 720, 1128, 1248, 2118, 2505
PspEI GGTNACC 1 cut(s) 2692
PspGI CCWGG 6 cut(s) 264, 720, 1128, 1248, 2118, 2505
PspPI GGNCC 4 cut(s) 262, 2050, 2278, 2325
PspPPI RGGWCCY 1 cut(s) 262
PstI CTGCAG 4 cut(s) 978, 1190, 1785, 2188
PsuI RGATCY 3 cut(s) 243, 787, 2545
PsyI GACNNNGTC 1 cut(s) 2109
RsaI GTAC 8 cut(s) 816, 989, 1299, 1732, 1976, 2556, 2583, 2971
RsaNI GTAC 8 cut(s) 815, 988, 1298, 1731, 1975, 2555, 2582, 2970
RseI CAYNNNNRTG 4 cut(s) 429, 1250, 2064, 2850
SacI GAGCTC 1 cut(s) 1211
SatI GCNGC 7 cut(s) 974, 1338, 1614, 1710, 1781, 2746, 2801
Sau96I GGNCC 4 cut(s) 262, 2050, 2278, 2325
SbfI CCTGCAGG 1 cut(s) 2188
SchI GAGTC 4 cut(s) 1171, 2150, 2539, 2656
ScrFI CCNGG 6 cut(s) 266, 722, 1130, 1250, 2120, 2507
SdaI CCTGCAGG 1 cut(s) 2188
SduI GDGCHC 4 cut(s) 1155, 1211, 1927, 2431
SexAI ACCWGGT 2 cut(s) 264, 2505
SfaNI GCATC 7 cut(s) 294, 301, 376, 619, 1021, 1473, 1662
SfcI CTRYAG 4 cut(s) 974, 1186, 1781, 2184
SfuI TTCGAA 1 cut(s) 1756
SinI GGWCC 3 cut(s) 262, 2050, 2278
SmiMI CAYNNNNRTG 4 cut(s) 429, 1250, 2064, 2850
SmlI CTYRAG 5 cut(s) 298, 1970, 1984, 2099, 2804
SmoI CTYRAG 5 cut(s) 298, 1970, 1984, 2099, 2804
Sse8387I CCTGCAGG 1 cut(s) 2188
SseBI AGGCCT 1 cut(s) 293
SsiI CCGC 1 cut(s) 1260
SspI AATATT 1 cut(s) 3001
SspMI CTAG 4 cut(s) 1301, 2039, 2552, 2723
SstI GAGCTC 1 cut(s) 1211
StuI AGGCCT 1 cut(s) 293
StyD4I CCNGG 6 cut(s) 264, 720, 1128, 1248, 2118, 2505
StyI CCWWGG 3 cut(s) 765, 933, 2046
TaaI ACNGT 5 cut(s) 428, 832, 1145, 1906, 2517
TaiI ACGT 4 cut(s) 808, 1625, 2931, 2998
TaqI TCGA 7 cut(s) 258, 838, 1072, 1090, 1582, 1756, 2991
TatI WGTACW 2 cut(s) 1297, 2554
TfiI GAWTC 6 cut(s) 435, 960, 1169, 1606, 1847, 2095
TscAI CASTG 4 cut(s) 718, 835, 2489, 2873
TseFI GTSAC 1 cut(s) 181
TseI GCWGC 7 cut(s) 973, 1337, 1613, 1709, 1780, 2745, 2800
Tsp45I GTSAC 1 cut(s) 181
TspGWI ACGGA 2 cut(s) 436, 2332
TspRI CASTG 4 cut(s) 718, 835, 2489, 2873
Tth111I GACNNNGTC 1 cut(s) 2109
Van91I CCANNNNNTGG 2 cut(s) 737, 2855
Vha464I CTTAAG 1 cut(s) 298
VneI GTGCAC 1 cut(s) 1923
VpaK11BI GGWCC 3 cut(s) 262, 2050, 2278
VspI ATTAAT 2 cut(s) 1502, 2831
XagI CCTNNNNNAGG 1 cut(s) 542
XapI RAATTY 7 cut(s) 398, 495, 967, 1222, 1233, 1600, 2007
XbaI TCTAGA 1 cut(s) 2722
XceI RCATGY 3 cut(s) 821, 1138, 2069
XmiI GTMKAC 1 cut(s) 780
XmnI GAANNNNTTC 1 cut(s) 806
XspI CTAG 4 cut(s) 1301, 2039, 2552, 2723
ZraI GACGTC 1 cut(s) 2929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.