Prupe.5G025200_v2.0.a1

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
2825088 .. 2828394
3307 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G025200.1

Sequence Viewer

Length: 2844 bp
ATGGCAGAAAGTGTGGTGAGCTTTTTGCTTGACAGGCTCAGCTCCGTAATAGAAGAGGAGGTGAGACTACTGTCAGGGACCCGAGCAGAGATGGAGGATATCGTCGAGGAGTTAGAGCGCATCAAGGCCTTCTTAAGGGTTGCTGATGCAAAGGAAGACAGTGACCCCCAGCTCAAAGTGTGGGTTAAACAAGTTAGAGATGTGGCTTATCAGATTGAAGATGCGCTTGATATATTCAGGCTTTCTCATTCATGTTATCATAGGCCGGGATGCCATGCTTCCCTTCATGAGCTTTCTTGCATCATTAACAAGTTGAAAGCTCGCCGGAGAATTGCTACTGATATTCAAGGCATAAAATCAAAAGTCAGAAGCCTCTCCGAGGGACATCAGAATTACAAACTTGATGTTGACCCTGGCTCAAGCAAGGTTCAGAAACATCACTACAGTCAAGGGGATGCTCTTTTGCTGGAAGAGGCTGATCTTGTGGCAATCGGCGAACCTAAAAGGCAGCTGATTAAGTTGCTTATGCAGGAGGGTGGCGACGCTAGACGCCAGGCAGTCGCGGTCGTTGGGATGGGAGGGCTGGGGAAAACCACCTTGGCCAAGCAAGTCTATAAGGATGCAAGAGTTAAGAAAAATTTCAAGGTACATGCTTGGATCACTGTTTCTCAATCATTCAAGATAAAGAAGCTCCTAAGACACATAGTTGAAAAAATCTTCAAAGTTATCAGGAAACCAGTCCCTGAAGAAGTTGATAGGATGGACACCAACCAGCTAAGAGAAAGAATAAAAAAATTGCTGCAGCACAGTAAGTACCTGATTGTTCTAGATGATCTTTGGCACATAGATGTCTGGGATGTCATCAATCATGCATTGCCTAACAACAAAGGTAGTCGAGTAATGATCACTACTCGTAATGCCTCTGTAGCCTCTGCCTCTTGCATGAATAACCACAGTATGGTCTACCATAAAGAGCCCTTATCTCCAGAAGATTCTTGGACTCTTCTCTGTAGGAAGACATTTCAGGAAGAGTCATGTCCTCCAAATTTGGAGGACATCTGTCGATGCATCTTAAGCAAATGTGGGGGACTGCCCCTTGCAATTGTGGCAATCGGTGCTGTTCTAGCTATGAAAGACAAGAAAAACATAGAAGATTGGGCTGCCGTTTGTGGCAGTATTGGTGCTGAAATTGAGGAAAATGACCAACTTGACAACATGAAAAGGTTGTTGTATCTCAGTTTCAGTGATTTACCATACCATCTCAAATCTTGTTTCTTGTATCTGAGTATCTTTCCTGATCTTTATAAATTCGAGTATATGAGATTAATTCGATTATGGATTGCTGAAGGATTTGTTATTGAAAAGGAAGGAAAGACACCAGAAGAAGTTGCAGAGAGTTACCTTAAGGAGCTACTGGACAGAAGTTTGATCGAAGCAGCAGAAATAGCTACCGATGGGAGGGTCAAATCATGTAGGATCCATGATCTTTTACGGGAGATTGTCGTTTTGAAGTCTAGGGAGCAAAACTTTGCAGCAATACAGAAAGCGCAAGGCACAATGTGGCCCGAAAAAGTTCGACGACTATCAATTTTTAACACGTTGCAGAATGTACAACAAAAGAGGACTCCTTCCAAACTTCGTTCGTTGCTCATTTTTGGGGTAGAAGATTCACTTACTGAGTTTTCAATACCAAAATTGTTTCCTAGAGGTCTTCCGCTGCTTACTGTATTAGACTTGGAAGGTGCCCCTCTAGAGACATTTCCAAAAGAGGTTGTCAACCTTCTTCTGCTCAGGTATCTTAGTTTGAGGGGTACCAAGGTGAAACAAATTCCAAGCTCCATCAAGAAGCTTCAAAACCTAGAGACCTTCGATCTTAAACACTCTCATGTCGTTGAGTTGCCTGCTGAAATTTTGAATCTCAAGCGACTGCGCCATCTCCTGGTATATCGCTATGAAGTTGAATCTTATGCACGATTTAATTCCAGATATGGAGTGAAGGTTCCTGCAGGAATATGTGGCTTACAATCGCTCCAAAAGCTGTGTTTTGTAGAGGCAAATCAAGACAATGGCGCTTTAGTGGCAGAGCTTGGGAGAATGAATCAACTGAGGAAGTTAGGCATTTTCAAGTTGAGACAAGAAGATGGGGTCACCTTATGCTCATCTATCGAAAAGATGCGCAACCTTCGGTCATTGTCTGTATCTTCAGTGGAGAAGGACAAGATAATTGATCTGACACACATTTCTTGTCCTCCTCAATTTCTTCAGCGACTATACTTGACGGGGCGTTTAGAAAACTTACCGCATTGGATTTCTTCGCTCCCGAACGTGGTGAGACTGTTTCTGAAATGGAGTCGGCTAAAGGAGGATCCTCTGGTGCATCTTCAAGGTTTGCCAAATCTAGTACATCTTGAACTCCTTCAGGTTTATGAGGGAGACTGTTTGCATTTTAAGGCAGGAGGGTTTCCAAGCCTGAAGTTACTAGGTATTGACAAACTAGATGAACTGAAATTGGTAAGCATGGATAAGGGAGCAATGCCTTGCCTAGAAAAGTTAATTATCCAGCGGTGCAGATTGTTGAAGAAGGTATCAGGCATTGAACATTTACAAGACCTAAAGCTGCTTGAATTTTTTGACATGCCAAACGAATTAATAAAGCGATTTCGTCCAGATGGTGGGGAAGATCATTGGAAAGTTGCTCACATTCCAGAGGTTTACTCTTCGTATTGGAACGTTGGGGGTTGGGATGTTTATTCATTAGAGATCACTGATGGGGAGAGTACTAGTCAGCAAGGTACTACTTCTGCCATGAGGAGGCTGGAACCTAATATTCTATGGAAGGCTTAG

Protein Analysis

948

Amino Acids

108.23

Weight (kDa)

8.79

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1305
Acc16I TGCGCA 1 cut(s) 2177
Acc65I GGTACC 1 cut(s) 1811
AccB1I GGYRCC 2 cut(s) 1742, 1811
AccB7I CCANNNNNTGG 3 cut(s) 958, 1939, 2672
AccI GTMKAC 1 cut(s) 963
AccII CGCG 1 cut(s) 563
AciI CCGC 4 cut(s) 563, 1715, 2300, 2563
AclI AACGTT 1 cut(s) 2730
AclWI GGATC 5 cut(s) 665, 1471, 1484, 2360, 2373
AcoI YGGCCR 1 cut(s) 600
AcsI RAATTY 6 cut(s) 637, 1045, 1307, 1827, 1908, 2624
AcuI CTGAAG 6 cut(s) 765, 1365, 2187, 2246, 2402, 2492
AcyI GRCGYC 1 cut(s) 550
AdeI CACNNNGTG 1 cut(s) 1560
AfaI GTAC 7 cut(s) 648, 815, 1611, 1813, 2403, 2779, 2794
AfiI CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2811
AflII CTTAAG 3 cut(s) 133, 1072, 1403
AflIII ACRYGT 1 cut(s) 1596
AhlI ACTAGT 1 cut(s) 2780
AjnI CCWGG 3 cut(s) 412, 552, 1938
AjuI GAANNNNNNNTTGG 2 cut(s) 581, 613
AloI GAACNNNNNNTCC 2 cut(s) 1983, 2015
Alw26I GTCTC 6 cut(s) 58, 1748, 1856, 2125, 2326, 2427
AlwI GGATC 5 cut(s) 665, 1471, 1484, 2360, 2373
AlwNI CAGNNNCTG 1 cut(s) 743
Ama87I CYCGRG 1 cut(s) 81
AoxI GGCC 4 cut(s) 126, 263, 600, 1562
ApeKI GCWGC 8 cut(s) 508, 799, 802, 1160, 1436, 1532, 1717, 2617
ApoI RAATTY 6 cut(s) 637, 1045, 1307, 1827, 1908, 2624
AseI ATTAAT 2 cut(s) 1325, 2648
Asp700I GAANNNNTTC 3 cut(s) 638, 1572, 2415
Asp718I GGTACC 1 cut(s) 1811
AspLEI GCGC 6 cut(s) 120, 226, 1549, 1932, 2072, 2178
AspS9I GGNCC 2 cut(s) 78, 1563
AsuC2I CCSGG 1 cut(s) 267
AsuHPI GGTGA 5 cut(s) 28, 73, 1831, 2140, 2341
AvaI CYCGRG 1 cut(s) 81
AvaII GGWCC 1 cut(s) 78
BaeGI GKGCMC 1 cut(s) 1747
BaeI ACNNNNGTAYC 2 cut(s) 1803, 1836
BalI TGGCCA 1 cut(s) 602
BamHI GGATCC 2 cut(s) 1476, 2365
BanI GGYRCC 2 cut(s) 1742, 1811
BanII GRGCYC 1 cut(s) 978
BbsI GAAGAC 3 cut(s) 162, 1022, 1703
BbvI GCAGC 8 cut(s) 520, 786, 814, 1147, 1448, 1544, 1704, 2604
BceAI ACGGC 1 cut(s) 1148
BciT130I CCWGG 3 cut(s) 414, 554, 1940
BclI TGATCA 1 cut(s) 903
BcnI CCSGG 1 cut(s) 267
BcoDI GTCTC 6 cut(s) 58, 1748, 1856, 2125, 2326, 2427
BcuI ACTAGT 1 cut(s) 2780
BfmI CTRYAG 5 cut(s) 442, 800, 924, 1009, 2004
BfoI RGCGCY 1 cut(s) 2073
BfrI CTTAAG 3 cut(s) 133, 1072, 1403
BisI GCNGC 8 cut(s) 509, 800, 803, 1161, 1437, 1533, 1718, 2618
BlpI GCTNAGC 1 cut(s) 38
BlsI GCNGC 8 cut(s) 510, 801, 804, 1162, 1438, 1534, 1719, 2619
BmcAI AGTACT 1 cut(s) 2779
Bme1390I CCNGG 4 cut(s) 267, 414, 554, 1940
Bme18I GGWCC 1 cut(s) 78
BmeT110I CYCGRG 1 cut(s) 81
BmgT120I GGNCC 2 cut(s) 78, 1563
BmiI GGNNCC 8 cut(s) 79, 80, 1478, 1744, 1813, 2001, 2367, 2820
BmrFI CCNGG 4 cut(s) 267, 414, 554, 1940
BoxI GACNNNNGTC 2 cut(s) 70, 1059
BpiI GAAGAC 3 cut(s) 162, 1022, 1703
BplI GAGNNNNNCTC 2 cut(s) 2699, 2731
BpmI CTGGAG 1 cut(s) 969
Bpu10I CCTNAGC 1 cut(s) 1790
Bpu1102I GCTNAGC 1 cut(s) 38
BpuEI CTTGAG 2 cut(s) 403, 1904
BpuMI CCSGG 1 cut(s) 267
BsaHI GRCGYC 1 cut(s) 550
BsaI GGTCTC 1 cut(s) 1856
BsaJI CCNNGG 4 cut(s) 378, 412, 597, 1815
BsaXI ACNNNNNCTCC 4 cut(s) 1983, 2013, 2013, 2043
Bsc4I CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2811
Bse1I ACTGG 2 cut(s) 737, 1419
Bse3DI GCAATG 2 cut(s) 872, 2538
BseBI CCWGG 3 cut(s) 414, 554, 1940
BseDI CCNNGG 4 cut(s) 378, 412, 597, 1815
BseGI GGATG 7 cut(s) 275, 460, 579, 625, 765, 862, 2749
BseLI CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2811
BseMI GCAATG 2 cut(s) 872, 2538
BseMII CTCAG 6 cut(s) 52, 1249, 1274, 1668, 1804, 2096
BseNI ACTGG 2 cut(s) 737, 1419
BseRI GAGGAG 4 cut(s) 71, 122, 2241, 2824
BseSI GKGCMC 1 cut(s) 1747
BseXI GCAGC 8 cut(s) 520, 786, 814, 1147, 1448, 1544, 1704, 2604
BseYI CCCAGC 2 cut(s) 168, 583
BsgI GTGCAG 1 cut(s) 2587
Bsh1236I CGCG 1 cut(s) 563
Bsh1285I CGRYCG 1 cut(s) 567
BshFI GGCC 4 cut(s) 128, 265, 602, 1564
BshNI GGYRCC 2 cut(s) 1742, 1811
BsiEI CGRYCG 1 cut(s) 567
BsiHKCI CYCGRG 1 cut(s) 81
BsiSI CCGG 2 cut(s) 266, 325
BslFI GGGAC 4 cut(s) 91, 396, 725, 1101
BslI CCNNNNNNNGG 8 cut(s) 135, 379, 958, 1458, 1939, 2326, 2672, 2811
BsmAI GTCTC 6 cut(s) 58, 1748, 1856, 2125, 2326, 2427
BsmFI GGGAC 4 cut(s) 91, 396, 725, 1101
BsnI GGCC 4 cut(s) 128, 265, 602, 1564
Bso31I GGTCTC 1 cut(s) 1856
BsoBI CYCGRG 1 cut(s) 81
Bsp1286I GDGCHC 2 cut(s) 978, 1747
Bsp1407I TGTACA 1 cut(s) 1609
Bsp1720I GCTNAGC 1 cut(s) 38
BspACI CCGC 4 cut(s) 563, 1715, 2300, 2563
BspANI GGCC 4 cut(s) 128, 265, 602, 1564
BspCNI CTCAG 6 cut(s) 51, 1248, 1275, 1669, 1803, 2097
BspFNI CGCG 1 cut(s) 563
BspHI TCATGA 1 cut(s) 286
BspLI GGNNCC 8 cut(s) 79, 80, 1478, 1744, 1813, 2001, 2367, 2820
BspMAI CTGCAG 2 cut(s) 804, 2008
BspPI GGATC 5 cut(s) 665, 1471, 1484, 2360, 2373
BspT107I GGYRCC 2 cut(s) 1742, 1811
BspTI CTTAAG 3 cut(s) 133, 1072, 1403
BspTNI GGTCTC 1 cut(s) 1856
BsrDI GCAATG 2 cut(s) 872, 2538
BsrGI TGTACA 1 cut(s) 1609
BsrI ACTGG 2 cut(s) 737, 1419
BssECI CCNNGG 4 cut(s) 378, 412, 597, 1815
BssNI GRCGYC 1 cut(s) 550
BssT1I CCWWGG 2 cut(s) 597, 1815
Bst2UI CCWGG 3 cut(s) 414, 554, 1940
Bst4CI ACNGT 9 cut(s) 72, 161, 446, 664, 809, 956, 1726, 2337, 2438
Bst6I CTCTTC 5 cut(s) 48, 465, 1008, 1023, 2722
BstACI GRCGYC 1 cut(s) 550
BstAFI CTTAAG 3 cut(s) 133, 1072, 1403
BstAPI GCANNNNNTGC 1 cut(s) 1115
BstAUI TGTACA 1 cut(s) 1609
BstC8I GCNNGC 2 cut(s) 322, 1902
BstEII GGTNACC 1 cut(s) 2146
BstENI CCTNNNNNAGG 2 cut(s) 133, 377
BstF5I GGATG 7 cut(s) 275, 460, 579, 625, 765, 862, 2749
BstFNI CGCG 1 cut(s) 563
BstH2I RGCGCY 1 cut(s) 2073
BstHHI GCGC 6 cut(s) 120, 226, 1549, 1932, 2072, 2178
BstMAI GTCTC 6 cut(s) 58, 1748, 1856, 2125, 2326, 2427
BstMCI CGRYCG 1 cut(s) 567
BstMWI GCNNNNNNNGC 9 cut(s) 34, 926, 1074, 1106, 1115, 1124, 1445, 2035, 2078
BstNI CCWGG 3 cut(s) 414, 554, 1940
BstNSI RCATGY 2 cut(s) 653, 2638
BstPAI GACNNNNGTC 2 cut(s) 70, 1059
BstPI GGTNACC 1 cut(s) 2146
BstSCI CCNGG 4 cut(s) 265, 412, 552, 1938
BstSFI CTRYAG 5 cut(s) 442, 800, 924, 1009, 2004
BstSLI GKGCMC 1 cut(s) 1747
BstUI CGCG 1 cut(s) 563
BstV1I GCAGC 8 cut(s) 520, 786, 814, 1147, 1448, 1544, 1704, 2604
BstV2I GAAGAC 3 cut(s) 162, 1022, 1703
BstX2I RGATCY 2 cut(s) 1476, 2365
BstYI RGATCY 2 cut(s) 1476, 2365
BsuRI GGCC 4 cut(s) 128, 265, 602, 1564
BtsCI GGATG 7 cut(s) 275, 460, 579, 625, 765, 862, 2749
BtsIMutI CAGTG 5 cut(s) 166, 660, 1249, 2211, 2763
Cac8I GCNNGC 2 cut(s) 322, 1902
CaiI CAGNNNCTG 1 cut(s) 743
CciI TCATGA 1 cut(s) 286
CfoI GCGC 6 cut(s) 120, 226, 1549, 1932, 2072, 2178
Cfr13I GGNCC 2 cut(s) 78, 1563
CseI GACGC 2 cut(s) 551, 558
Csp6I GTAC 7 cut(s) 647, 814, 1610, 1812, 2402, 2778, 2793
CviQI GTAC 7 cut(s) 647, 814, 1610, 1812, 2402, 2778, 2793
DraIII CACNNNGTG 1 cut(s) 1560
EaeI YGGCCR 1 cut(s) 600
Eam1104I CTCTTC 5 cut(s) 48, 465, 1008, 1023, 2722
EarI CTCTTC 5 cut(s) 48, 465, 1008, 1023, 2722
Eco130I CCWWGG 2 cut(s) 597, 1815
Eco147I AGGCCT 1 cut(s) 128
Eco24I GRGCYC 1 cut(s) 978
Eco31I GGTCTC 1 cut(s) 1856
Eco32I GATATC 1 cut(s) 100
Eco47I GGWCC 1 cut(s) 78
Eco57I CTGAAG 6 cut(s) 765, 1365, 2187, 2246, 2402, 2492
Eco88I CYCGRG 1 cut(s) 81
Eco91I GGTNACC 1 cut(s) 2146
EcoNI CCTNNNNNAGG 2 cut(s) 133, 377
EcoO109I RGGNCCY 1 cut(s) 78
EcoO65I GGTNACC 1 cut(s) 2146
EcoRII CCWGG 3 cut(s) 412, 552, 1938
EcoRV GATATC 1 cut(s) 100
EcoT14I CCWWGG 2 cut(s) 597, 1815
EcoT22I ATGCAT 2 cut(s) 874, 1070
EcoT38I GRGCYC 1 cut(s) 978
ErhI CCWWGG 2 cut(s) 597, 1815
FalI AAGNNNNNCTT 6 cut(s) 116, 148, 210, 242, 1656, 1688
FaqI GGGAC 4 cut(s) 91, 396, 725, 1101
FbaI TGATCA 1 cut(s) 903
FblI GTMKAC 1 cut(s) 963
Fnu4HI GCNGC 8 cut(s) 509, 800, 803, 1161, 1437, 1533, 1718, 2618
FokI GGATG 7 cut(s) 282, 467, 586, 632, 772, 869, 2756
FriOI GRGCYC 1 cut(s) 978
Fsp4HI GCNGC 8 cut(s) 509, 800, 803, 1161, 1437, 1533, 1718, 2618
FspI TGCGCA 1 cut(s) 2177
GlaI GCGC 6 cut(s) 119, 225, 1548, 1931, 2071, 2177
GluI GCNGC 8 cut(s) 509, 800, 803, 1161, 1437, 1533, 1718, 2618
GsaI CCCAGC 2 cut(s) 172, 587
GsuI CTGGAG 1 cut(s) 969
HaeII RGCGCY 1 cut(s) 2073
HaeIII GGCC 4 cut(s) 128, 265, 602, 1564
HapII CCGG 2 cut(s) 266, 325
HgaI GACGC 2 cut(s) 551, 558
HhaI GCGC 6 cut(s) 120, 226, 1549, 1932, 2072, 2178
Hin1I GRCGYC 1 cut(s) 550
Hin6I GCGC 6 cut(s) 118, 224, 1547, 1930, 2070, 2176
HinP1I GCGC 6 cut(s) 118, 224, 1547, 1930, 2070, 2176
HincII GTYRAC 2 cut(s) 409, 1777
HindII GTYRAC 2 cut(s) 409, 1777
HindIII AAGCTT 1 cut(s) 1847
HinfI GANTC 9 cut(s) 992, 1000, 1031, 1624, 1667, 1915, 1961, 2098, 2350
HpaII CCGG 2 cut(s) 266, 325
HphI GGTGA 5 cut(s) 28, 73, 1831, 2140, 2341
Hpy166II GTNNAC 4 cut(s) 409, 964, 1777, 2713
Hpy188I TCNGA 8 cut(s) 213, 368, 379, 390, 432, 1284, 2232, 2343
Hpy8I GTNNAC 4 cut(s) 409, 964, 1777, 2713
Hpy99I CGWCG 3 cut(s) 107, 545, 1581
HpyCH4III ACNGT 9 cut(s) 72, 161, 446, 664, 809, 956, 1726, 2337, 2438
HpyCH4IV ACGT 3 cut(s) 1598, 2325, 2730
HpyF10VI GCNNNNNNNGC 9 cut(s) 34, 926, 1074, 1106, 1115, 1124, 1445, 2035, 2078
HpySE526I ACGT 3 cut(s) 1598, 2325, 2730
Hsp92I GRCGYC 1 cut(s) 550
HspAI GCGC 6 cut(s) 118, 224, 1547, 1930, 2070, 2176
KflI GGGWCCC 1 cut(s) 78
KpnI GGTACC 1 cut(s) 1815
Ksp22I TGATCA 1 cut(s) 903
LmnI GCTCC 8 cut(s) 47, 696, 1408, 1519, 1841, 2034, 2322, 2528
Lsp1109I GCAGC 8 cut(s) 520, 786, 814, 1147, 1448, 1544, 1704, 2604
MaeII ACGT 3 cut(s) 1598, 2325, 2730
MaeIII GTNAC 4 cut(s) 161, 1397, 2146, 2475
MfeI CAATTG 1 cut(s) 1101
MflI RGATCY 2 cut(s) 1476, 2365
MhlI GDGCHC 2 cut(s) 978, 1747
MlsI TGGCCA 1 cut(s) 602
MluNI TGGCCA 1 cut(s) 602
MlyI GAGTC 4 cut(s) 994, 1040, 1618, 2359
Mox20I TGGCCA 1 cut(s) 602
Mph1103I ATGCAT 2 cut(s) 874, 1070
MroXI GAANNNNTTC 3 cut(s) 638, 1572, 2415
MscI TGGCCA 1 cut(s) 602
MslI CAYNNNNRTG 2 cut(s) 846, 1884
Msp20I TGGCCA 1 cut(s) 602
MspA1I CMGCKG 3 cut(s) 511, 1717, 2563
MspCI CTTAAG 3 cut(s) 133, 1072, 1403
MspI CCGG 2 cut(s) 266, 325
MspR9I CCNGG 4 cut(s) 267, 414, 554, 1940
MunI CAATTG 1 cut(s) 1101
MvaI CCWGG 3 cut(s) 414, 554, 1940
MvnI CGCG 1 cut(s) 563
MwoI GCNNNNNNNGC 9 cut(s) 34, 926, 1074, 1106, 1115, 1124, 1445, 2035, 2078
NciI CCSGG 1 cut(s) 267
NlaIV GGNNCC 8 cut(s) 79, 80, 1478, 1744, 1813, 2001, 2367, 2820
NmuCI GTSAC 2 cut(s) 161, 2146
NsbI TGCGCA 1 cut(s) 2177
NsiI ATGCAT 2 cut(s) 874, 1070
NspI RCATGY 2 cut(s) 653, 2638
PagI TCATGA 1 cut(s) 286
PceI AGGCCT 1 cut(s) 128
PdmI GAANNNNTTC 3 cut(s) 638, 1572, 2415
PfeI GAWTC 5 cut(s) 992, 1667, 1915, 1961, 2098
PflMI CCANNNNNTGG 3 cut(s) 958, 1939, 2672
PkrI GCNGC 8 cut(s) 510, 801, 804, 1162, 1438, 1534, 1719, 2619
PleI GAGTC 4 cut(s) 994, 1039, 1618, 2358
PpsI GAGTC 4 cut(s) 994, 1039, 1618, 2358
PpuMI RGGWCCY 1 cut(s) 78
PshAI GACNNNNGTC 2 cut(s) 70, 1059
PshBI ATTAAT 2 cut(s) 1325, 2648
PsiI TTATAA 1 cut(s) 1305
Psp1406I AACGTT 1 cut(s) 2730
Psp5II RGGWCCY 1 cut(s) 78
Psp6I CCWGG 3 cut(s) 412, 552, 1938
PspEI GGTNACC 1 cut(s) 2146
PspFI CCCAGC 2 cut(s) 168, 583
PspGI CCWGG 3 cut(s) 412, 552, 1938
PspN4I GGNNCC 8 cut(s) 79, 80, 1478, 1744, 1813, 2001, 2367, 2820
PspPI GGNCC 2 cut(s) 78, 1563
PspPPI RGGWCCY 1 cut(s) 78
PstI CTGCAG 2 cut(s) 804, 2008
PstNI CAGNNNCTG 1 cut(s) 743
PsuI RGATCY 2 cut(s) 1476, 2365
PvuII CAGCTG 1 cut(s) 511
RsaI GTAC 7 cut(s) 648, 815, 1611, 1813, 2403, 2779, 2794
RsaNI GTAC 7 cut(s) 647, 814, 1610, 1812, 2402, 2778, 2793
RseI CAYNNNNRTG 2 cut(s) 846, 1884
SatI GCNGC 8 cut(s) 509, 800, 803, 1161, 1437, 1533, 1718, 2618
Sau96I GGNCC 2 cut(s) 78, 1563
SbfI CCTGCAGG 1 cut(s) 2008
ScaI AGTACT 1 cut(s) 2779
SchI GAGTC 4 cut(s) 994, 1040, 1618, 2359
ScrFI CCNGG 4 cut(s) 267, 414, 554, 1940
SdaI CCTGCAGG 1 cut(s) 2008
SduI GDGCHC 2 cut(s) 978, 1747
SfcI CTRYAG 5 cut(s) 442, 800, 924, 1009, 2004
SinI GGWCC 1 cut(s) 78
SmiMI CAYNNNNRTG 2 cut(s) 846, 1884
SmlI CTYRAG 5 cut(s) 133, 418, 1072, 1403, 1919
SmoI CTYRAG 5 cut(s) 133, 418, 1072, 1403, 1919
SpeI ACTAGT 1 cut(s) 2780
Sse8387I CCTGCAGG 1 cut(s) 2008
SseBI AGGCCT 1 cut(s) 128
SsiI CCGC 4 cut(s) 563, 1715, 2300, 2563
SspI AATATT 1 cut(s) 2827
StuI AGGCCT 1 cut(s) 128
StyD4I CCNGG 4 cut(s) 265, 412, 552, 1938
StyI CCWWGG 2 cut(s) 597, 1815
TaaI ACNGT 9 cut(s) 72, 161, 446, 664, 809, 956, 1726, 2337, 2438
TaiI ACGT 3 cut(s) 1601, 2328, 2733
TaqI TCGA 9 cut(s) 105, 895, 1063, 1311, 1330, 1431, 1576, 1869, 2166
TaqII GACCGA 1 cut(s) 2175
TatI WGTACW 3 cut(s) 1609, 2401, 2777
TfiI GAWTC 5 cut(s) 992, 1667, 1915, 1961, 2098
TscAI CASTG 5 cut(s) 166, 667, 1249, 2211, 2770
TseFI GTSAC 2 cut(s) 161, 2146
TseI GCWGC 8 cut(s) 508, 799, 802, 1160, 1436, 1532, 1717, 2617
Tsp45I GTSAC 2 cut(s) 161, 2146
TspDTI ATGAA 9 cut(s) 240, 275, 959, 1145, 1232, 1968, 2111, 2514, 2742
TspGWI ACGGA 1 cut(s) 34
TspRI CASTG 5 cut(s) 166, 667, 1249, 2211, 2770
Van91I CCANNNNNTGG 3 cut(s) 958, 1939, 2672
Vha464I CTTAAG 3 cut(s) 133, 1072, 1403
VpaK11BI GGWCC 1 cut(s) 78
VspI ATTAAT 2 cut(s) 1325, 2648
XagI CCTNNNNNAGG 2 cut(s) 133, 377
XapI RAATTY 6 cut(s) 637, 1045, 1307, 1827, 1908, 2624
XbaI TCTAGA 2 cut(s) 826, 1750
XceI RCATGY 2 cut(s) 653, 2638
XcmI CCANNNNNNNNNTGG 2 cut(s) 993, 2812
XmiI GTMKAC 1 cut(s) 963
XmnI GAANNNNTTC 3 cut(s) 638, 1572, 2415
ZrmI AGTACT 1 cut(s) 2779
Zsp2I ATGCAT 2 cut(s) 874, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.