Rw7G022960

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
27346988 .. 27367434
20447 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G022960.1

Sequence Viewer

Length: 2862 bp
ATGATGCCTTTGCATATTCTGTTGCAAAAACAGGACAAATATATAGCCCTATCAAGCAAAGCAATGGCAGAAAGTGTAGTTGCCATTTTAGTGGGCAGGCTCAGCACGTTACTCGTAGATGAGGTGAAACTATTGTCAGGGATCAAAGGCCAGGTGGAGGACATGGTTGAGGAATTAGAGCGCATCCAGGCATTCTTGAGGGTTGCTGATGCAAAGGAAGACAGCAACCCTCAGCTCAAAGTGTGGGTTAAACAAGTTAGAGATGTGGCTCATGAGATGGAAGATGCCCTTGATAAATTCAGGCTTTCCAATTCACAAGATGTGCAGCGTGAACTCCCTGCTTTCCTTCAAAAGCTTTCTTGCATCATCATGAAACCGAAAGCTTGCCATCAAATTGCAGCTGATATTCAACGCCTACAGTTGAAAGTCCAAACGCTCTCAGAGGGACATATCAGATACCCACTTTATGATCAAGGTCAGCAATGTCAGTTCAATCAAGTTTATTTCCTTTCACCAGAAGAGGCAGAGCTTGTGGGAATTGGAGAGCGCAAAGAGAAGCTTATTGAGATGCTTATGGAGGATGATTTCAAAGACCAGGTGATTCCAGTAGTTGGTATGGGAGGATTGGGAAAAACTACCTTGATAAAACAAGTATACAAGGATGCCAGAGTTAAGAATCATTTTAAGGTACATGCTTGGATCACTGTTTCTCGATCATACAAGATAAACCAGCTCCTAAAACATCTGATCCATGAAATCTACCAAGTTATGAGGAGAATGGTTCCCAAAGATGAAGAAGTTGAAAGCATGCATGACTATCAGCTAATAGAGAGAATAAGAGAATTGCTGCTGAATACTAGGTACCTGATTGTTCTTGATGGTATATGGCATATATCGGACTGGGATGCCATCAATCATGTAATGCCGAACAACAATCGTGGTAGTCGAGTAATGCTCACTACTCGCTATGTTAATGTAGCCTCTGCCTCTTGCTTGGGGAACCATGACATGCTCTACCATTTAGAGCCCTTATCTCCAGAGGATTCTTGGACTCTTTTCTCTAAGAAGACATTTCATGGAGAGTCATGCCCACCAAATTTGGAGGAAATATGTCGATCCATCCTGATGAAATGCAGGGGACTGCCCCTTGCAATTGTGGCCATCAGCGCTGTACTAGCTTTAAAAGACAAGAGAAATGTGGATGAATGGGCTGCTGTTTCTGGAAGCATTGGAGCTGAAATTGACGGAAATGATCAACTTTACAACCTGAAAAAATTGCTGTATCTCAGTTACAGTGATTTACCATACCATCTGAAATCTTGTTTCTTATATCTGAGCATCTTTCCTGATCTTTACAAAATTGAGCATATGAAATTAATTCGGTTATGGTTAGCTGAAGGATTTGTTATTGGAATAGAGGGAAGGACACCAGAAGAAGCTGCAGAGAGTTACCTCAGAGAGTTATTGGACAGAAGTTTGATTCAAGCAGCAGAAACATCGACTGATGGGAGAGTTAAATCATATCGCATCCATGATCTTTTACGGGAGATTGTCATTTGGAAGTCTAGAGAGCAAAACTTTGCAGCAATAGAAAAAGAGCAAGGTACAATGTGGCCTGAGAAAGTTCGAAGACTATCAATAGTTAACACGCTGCAGAATGTACATCAAAAGAGGACTCCATCCCGACTTCGTTCTTTGCTCGTTTTTGGGGTGGAAGATTCACTTACTGATTTTCCCATACCAAAATTGTTTCCTACCGGTCTTCAGTTGCTTACTGTCTTAGACTTAGAAGGTGCACATCTGGATATGTTTCCAAGTGAGGTTGTCAAGCTTCTTCTACTCAAGTACCTTAGCTTGAGGCATACAAAGGTGAAAGAAATTCCAAGCTCCATCAAGAAGCTACAAAACCTAGAGACCTTGGACCTTAAACACTCGCATGTTGTTGAATTACCTGCTGAGATTTTGAATCTCAAGCGACTTCGTCATCTCCTGGTTTATCGTTATGAGGTTGAGTCATATGCCCGATTTAATGCCAGAAAAGGAGTTAAGATTCCGGCAGGGATAAGTAGCTTGCAATCGCTCCAAAAGATCTGCTTTATAGAGGCAAATCAATACAGTGGTGCTTTAATGGCAGAGCTTGGGAGAATGAAGCAGCTAAGGAGGTTAGGCATTTATAAGTTGAGAGAAGAAGATGGGGCCACCTTATGCTCATCCGTCCAAAATATGACCAGCCTTCGCTCGTTGTCTGTATTTTCAGCAGAGAAAGAGAAGATAATTGATCTTAGCCACATTTCTCGTGCTCCTCCATTTCTTCAGCGACTATACTTGGCAGGGCGTTTAGAAAACTTACCCCACTGGATTTCTTCTCTTCAAAACCTGGTCAGACTGTTTCTAAAATGGAGTCGGCTGAAGGAGGATCCTCTAGTACATCTTCGGGGTTTGCCAAACCTGGTACATCTTGAACTTTTACAAGTTTATGATGGAGAAAGCTTGAACTTTGAGGCAGGAGGGTTTCCAAGTCTGAAGTTATTAGGTATTGATAAATTGGATGAACTACAATCGGTAACCATAGAGGAGGGAGCAATGCCTTCTCTAGAAAAGCTAATTATCCAGCGCTGCAAATGCTTGAAGAAGGTCCCATCTGGCATTGAACATTTAACCAATTTAAAGCTGCTTGAGTTTTTCGATATGCCAGATGAATTAATCATGCCACTACATCCAGATGGTGGAGAAGATCACTGGAAAGTTGCTCATGTTCCAGCAGTTTATTATTCATATTGGAGAGGTGGGGGTTGGGACGTCTATTCACTATTCAATGATGTAAAGAGGAGGCTCGAACCTAATATTCTAGGGAAGGTGTAG

Protein Analysis

953

Amino Acids

109.44

Weight (kDa)

7.87

Isoelectric Point (pI)

46.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 26 - 106 2.4e-24 Rx N-terminal domain
NB-ARC PF00931 183 - 362 2.4e-43 NB-ARC domain
WHD_DRP PF23559 447 - 518 3e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 563 - 892 5.6e-50 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000482)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g23450 FvH4_5g23460 FvH4_5g23470 FvH4_5g24290 FvH4_5g24300
malus_domestica MD06G1024000.v1.1
prunus_persica Prupe.5G025000_v2.0.a1 Prupe.5G025000_v2.0.a1 Prupe.5G025100_v2.0.a1 Prupe.5G025200_v2.0.a1
pyrus_communis pycom16g25280
rosa_chinensis RchiOBHm_Chr7g0212511 RchiOBHm_Chr7g0212531 RchiOBHm_Chr7g0212541 RchiOBHm_Chr7g0212561 RchiOBHm_Chr7g0212571 RchiOBHm_Chr7g0212621 RchiOBHm_Chr7g0212631 RchiOBHm_Chr7g0212671 RchiOBHm_Chr7g0212691 RchiOBHm_Chr7g0212701
rosa_laevigata RLG00000002879 RLG00000002883 RLG00000002884 RLG00000002885
rosa_multiflora Rmu_co8121580.1_g000001 Rmu_sc0000394.1_g000014 Rmu_sc0000394.1_g000015 Rmu_sc0001435.1_g000001 Rmu_sc0005246.1_g000005 Rmu_sc0005246.1_g000010 Rmu_sc0005246.1_g000015 Rmu_sc0005246.1_g000016 Rmu_sc0005770.1_g000018 Rmu_sc0005770.1_g000019 Rmu_sc0005770.1_g000020 Rmu_sc0007576.1_g000019 Rmu_sc0009400.1_g000001 Rmu_sc0011082.1_g000001 Rmu_sc0038076.1_g000002
rosa_roxburghii Rroxscaffold_3G00246720
rosa_rugosa Rorug07G0134800 Rorug07G0134900 Rorug07G0135100 Rorug07G0135200 Rorug07G0135400 Rorug07G0135500 Rorug07G0135800 Rorug07G0135900
rosa_samantha Rh2AG310100 Rh2CG296700 Rh2CG297000 Rh2CG301700 Rh7BG258900 Rh7BG261600 Rh7BG261700 Rh7BG261800 Rh7BG261900 Rh7BG262000 Rh7BG262100 Rh7BG262400 Rh7BG262500 Rh7BG263100 Rh7BG263200 Rh7CG284400 Rh7CG284600 Rh7CG284700 Rh7CG284900 Rh7CG285100 Rh7CG285500 Rh7CG285600 Rh7CG285700 Rh7CG286200 Rh7CG286600 Rh7CG286700 Rh7DG274400 Rh7DG274600 Rh7DG274800 Rh7DG274900 Rh7DG275100 Rh7DG275200 Rh7DG275500 Rh7DG275600 Rh7DG275700
rosa_wichuraiana Rw7G022910 Rw7G022960 Rw7G022980 Rw7G023010 Rw7G023050 Rw7G023110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2175
AatII GACGTC 1 cut(s) 2802
Acc36I ACCTGC 1 cut(s) 1960
Acc65I GGTACC 1 cut(s) 861
AccB1I GGYRCC 1 cut(s) 861
AccB7I CCANNNNNTGG 2 cut(s) 611, 2726
AccI GTMKAC 1 cut(s) 654
AclWI GGATC 6 cut(s) 149, 707, 742, 1110, 2411, 2424
AcoI YGGCCR 1 cut(s) 1158
AcsI RAATTY 3 cut(s) 296, 1096, 1878
AcuI CTGAAG 5 cut(s) 1416, 1748, 2297, 2429, 2543
AcyI GRCGYC 1 cut(s) 2799
AfaI GTAC 8 cut(s) 690, 863, 1173, 1606, 1662, 1847, 2427, 2454
AfeI AGCGCT 2 cut(s) 1168, 2615
AfiI CCNNNNNNNGG 3 cut(s) 157, 611, 2726
AgeI ACCGGT 1 cut(s) 1757
AjnI CCWGG 6 cut(s) 150, 186, 594, 1989, 2376, 2448
Alw21I GWGCWC 2 cut(s) 1798, 2302
Alw26I GTCTC 1 cut(s) 1907
Alw44I GTGCAC 1 cut(s) 1794
AlwI GGATC 6 cut(s) 149, 707, 742, 1110, 2411, 2424
Aor51HI AGCGCT 2 cut(s) 1168, 2615
AoxI GGCC 4 cut(s) 148, 1158, 1613, 2196
ApaLI GTGCAC 1 cut(s) 1794
ApoI RAATTY 3 cut(s) 296, 1096, 1878
AseI ATTAAT 2 cut(s) 1376, 2702
AsiGI ACCGGT 1 cut(s) 1757
Asp718I GGTACC 1 cut(s) 861
AspLEI GCGC 4 cut(s) 183, 549, 1169, 2616
AspS9I GGNCC 3 cut(s) 1921, 2196, 2635
AsuHPI GGTGA 4 cut(s) 136, 504, 610, 1882
AsuII TTCGAA 1 cut(s) 1627
AvaII GGWCC 2 cut(s) 1921, 2635
BaeGI GKGCMC 1 cut(s) 1798
BaeI ACNNNNGTAYC 2 cut(s) 1829, 1862
BalI TGGCCA 1 cut(s) 1160
BamHI GGATCC 1 cut(s) 2416
BanI GGYRCC 1 cut(s) 861
BanII GRGCYC 1 cut(s) 1029
BauI CACGAG 1 cut(s) 2295
BbsI GAAGAC 4 cut(s) 225, 1073, 1636, 1754
Bbv12I GWGCWC 2 cut(s) 1798, 2302
BbvCI CCTCAGC 1 cut(s) 231
BcgI CGANNNNNNTGC 4 cut(s) 94, 128, 1479, 1513
BciT130I CCWGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
BclI TGATCA 2 cut(s) 469, 1252
BcoDI GTCTC 1 cut(s) 1907
BfaI CTAG 7 cut(s) 858, 1175, 1566, 1910, 2423, 2594, 2849
BfmI CTRYAG 3 cut(s) 416, 1440, 1652
BfoI RGCGCY 2 cut(s) 1170, 2617
BfuAI ACCTGC 1 cut(s) 1960
BglII AGATCT 1 cut(s) 2088
BlpI GCTNAGC 1 cut(s) 101
Bme1390I CCNGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
Bme18I GGWCC 2 cut(s) 1921, 2635
BmgT120I GGNCC 3 cut(s) 1921, 2196, 2635
BmiI GGNNCC 6 cut(s) 783, 863, 1001, 2197, 2418, 2637
BmrFI CCNGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
BmrI ACTGGG 1 cut(s) 910
BmsI GCATC 9 cut(s) 192, 199, 274, 372, 558, 652, 895, 1347, 1536
BmuI ACTGGG 1 cut(s) 910
BpiI GAAGAC 4 cut(s) 225, 1073, 1636, 1754
BplI GAGNNNNNCTC 2 cut(s) 939, 971
BpmI CTGGAG 1 cut(s) 1020
Bpu10I CCTNAGC 3 cut(s) 231, 1850, 2156
Bpu1102I GCTNAGC 1 cut(s) 101
Bpu14I TTCGAA 1 cut(s) 1627
BpuEI CTTGAG 5 cut(s) 217, 1826, 1876, 1955, 2696
BsaHI GRCGYC 1 cut(s) 2799
BsaI GGTCTC 1 cut(s) 1907
BsaJI CCNNGG 1 cut(s) 1917
BsaWI WCCGGW 1 cut(s) 1757
Bsc4I CCNNNNNNNGG 3 cut(s) 157, 611, 2726
Bse118I RCCGGY 1 cut(s) 1757
Bse1I ACTGG 4 cut(s) 605, 905, 2360, 2744
Bse3DI GCAATG 3 cut(s) 69, 488, 2589
BseBI CCWGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
BseDI CCNNGG 1 cut(s) 1917
BseLI CCNNNNNNNGG 3 cut(s) 157, 611, 2726
BseMI GCAATG 3 cut(s) 69, 488, 2589
BseMII CTCAG 8 cut(s) 115, 245, 453, 1300, 1325, 1468, 1608, 1947
BseNI ACTGG 4 cut(s) 605, 905, 2360, 2744
BseRI GAGGAG 4 cut(s) 787, 2292, 2588, 2842
BseSI GKGCMC 1 cut(s) 1798
BsgI GTGCAG 1 cut(s) 344
BshFI GGCC 4 cut(s) 150, 1160, 1615, 2198
BshNI GGYRCC 1 cut(s) 861
BshTI ACCGGT 1 cut(s) 1757
BsiHKAI GWGCWC 2 cut(s) 1798, 2302
BsiSI CCGG 2 cut(s) 1758, 2054
BslFI GGGAC 4 cut(s) 459, 1152, 2621, 2810
BslI CCNNNNNNNGG 3 cut(s) 157, 611, 2726
BsmAI GTCTC 1 cut(s) 1907
BsmFI GGGAC 4 cut(s) 459, 1152, 2621, 2810
BsmI GAATGC 1 cut(s) 191
BsnI GGCC 4 cut(s) 150, 1160, 1615, 2198
Bso31I GGTCTC 1 cut(s) 1907
Bsp119I TTCGAA 1 cut(s) 1627
Bsp1286I GDGCHC 3 cut(s) 1029, 1798, 2302
Bsp1407I TGTACA 1 cut(s) 1660
Bsp1720I GCTNAGC 1 cut(s) 101
BspANI GGCC 4 cut(s) 150, 1160, 1615, 2198
BspCNI CTCAG 8 cut(s) 114, 244, 452, 1299, 1326, 1467, 1609, 1948
BspHI TCATGA 2 cut(s) 271, 369
BspLI GGNNCC 6 cut(s) 783, 863, 1001, 2197, 2418, 2637
BspMAI CTGCAG 2 cut(s) 1444, 1656
BspMI ACCTGC 1 cut(s) 1960
BspPI GGATC 6 cut(s) 149, 707, 742, 1110, 2411, 2424
BspT104I TTCGAA 1 cut(s) 1627
BspT107I GGYRCC 1 cut(s) 861
BspTNI GGTCTC 1 cut(s) 1907
BsrDI GCAATG 3 cut(s) 69, 488, 2589
BsrFI RCCGGY 1 cut(s) 1757
BsrGI TGTACA 1 cut(s) 1660
BsrI ACTGG 4 cut(s) 605, 905, 2360, 2744
BssAI RCCGGY 1 cut(s) 1757
BssECI CCNNGG 1 cut(s) 1917
BssNAI GTATAC 1 cut(s) 655
BssNI GRCGYC 1 cut(s) 2799
BssSI CACGAG 1 cut(s) 2295
BssT1I CCWWGG 1 cut(s) 1917
Bst1107I GTATAC 1 cut(s) 655
Bst2BI CACGAG 1 cut(s) 2295
Bst2UI CCWGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
Bst4CI ACNGT 6 cut(s) 420, 706, 1295, 1777, 2117, 2388
Bst6I CTCTTC 2 cut(s) 513, 2373
BstACI GRCGYC 1 cut(s) 2799
BstAUI TGTACA 1 cut(s) 1660
BstBI TTCGAA 1 cut(s) 1627
BstC8I GCNNGC 4 cut(s) 98, 385, 809, 2072
BstEII GGTNACC 1 cut(s) 2563
BstH2I RGCGCY 2 cut(s) 1170, 2617
BstHHI GCGC 4 cut(s) 183, 549, 1169, 2616
BstMAI GTCTC 1 cut(s) 1907
BstMWI GCNNNNNNNGC 6 cut(s) 102, 1157, 1166, 1175, 2129, 2622
BstNI CCWGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
BstNSI RCATGY 4 cut(s) 695, 811, 1012, 1940
BstPI GGTNACC 1 cut(s) 2563
BstSCI CCNGG 6 cut(s) 150, 186, 594, 1989, 2376, 2448
BstSFI CTRYAG 3 cut(s) 416, 1440, 1652
BstSLI GKGCMC 1 cut(s) 1798
BstV2I GAAGAC 4 cut(s) 225, 1073, 1636, 1754
BstX2I RGATCY 2 cut(s) 2088, 2416
BstXI CCANNNNNNTGG 1 cut(s) 91
BstYI RGATCY 2 cut(s) 2088, 2416
BstZ17I GTATAC 1 cut(s) 655
BsuRI GGCC 4 cut(s) 150, 1160, 1615, 2198
BtsIMutI CAGTG 5 cut(s) 702, 1300, 2122, 2353, 2737
BveI ACCTGC 1 cut(s) 1960
Cac8I GCNNGC 4 cut(s) 98, 385, 809, 2072
CciI TCATGA 2 cut(s) 271, 369
CfoI GCGC 4 cut(s) 183, 549, 1169, 2616
Cfr10I RCCGGY 1 cut(s) 1757
Cfr13I GGNCC 3 cut(s) 1921, 2196, 2635
CsiI ACCWGGT 3 cut(s) 594, 2376, 2448
Csp6I GTAC 8 cut(s) 689, 862, 1172, 1605, 1661, 1846, 2426, 2453
CspAI ACCGGT 1 cut(s) 1757
CspCI CAANNNNNGTGG 4 cut(s) 919, 954, 1080, 1115
CviQI GTAC 8 cut(s) 689, 862, 1172, 1605, 1661, 1846, 2426, 2453
DraI TTTAAA 2 cut(s) 1182, 2667
EaeI YGGCCR 1 cut(s) 1158
Eam1104I CTCTTC 2 cut(s) 513, 2373
EarI CTCTTC 2 cut(s) 513, 2373
Eco130I CCWWGG 1 cut(s) 1917
Eco24I GRGCYC 1 cut(s) 1029
Eco31I GGTCTC 1 cut(s) 1907
Eco47I GGWCC 2 cut(s) 1921, 2635
Eco47III AGCGCT 2 cut(s) 1168, 2615
Eco57I CTGAAG 5 cut(s) 1416, 1748, 2297, 2429, 2543
Eco91I GGTNACC 1 cut(s) 2563
EcoO109I RGGNCCY 1 cut(s) 2635
EcoO65I GGTNACC 1 cut(s) 2563
EcoRII CCWGG 6 cut(s) 150, 186, 594, 1989, 2376, 2448
EcoT14I CCWWGG 1 cut(s) 1917
EcoT22I ATGCAT 1 cut(s) 813
EcoT38I GRGCYC 1 cut(s) 1029
ErhI CCWWGG 1 cut(s) 1917
FalI AAGNNNNNCTT 8 cut(s) 273, 305, 543, 575, 1707, 1739, 2078, 2110
FaqI GGGAC 4 cut(s) 459, 1152, 2621, 2810
FauNDI CATATG 2 cut(s) 1368, 2017
FbaI TGATCA 2 cut(s) 469, 1252
FblI GTMKAC 1 cut(s) 654
FriOI GRGCYC 1 cut(s) 1029
FspBI CTAG 7 cut(s) 858, 1175, 1566, 1910, 2423, 2594, 2849
GlaI GCGC 4 cut(s) 182, 548, 1168, 2615
GsuI CTGGAG 1 cut(s) 1020
HaeII RGCGCY 2 cut(s) 1170, 2617
HaeIII GGCC 4 cut(s) 150, 1160, 1615, 2198
HapII CCGG 2 cut(s) 1758, 2054
HhaI GCGC 4 cut(s) 183, 549, 1169, 2616
Hin1I GRCGYC 1 cut(s) 2799
Hin6I GCGC 4 cut(s) 181, 547, 1167, 2614
HinP1I GCGC 4 cut(s) 181, 547, 1167, 2614
HincII GTYRAC 1 cut(s) 1645
HindII GTYRAC 1 cut(s) 1645
HindIII AAGCTT 5 cut(s) 353, 381, 557, 1829, 2488
HpaI GTTAAC 1 cut(s) 1645
HpaII CCGG 2 cut(s) 1758, 2054
HphI GGTGA 4 cut(s) 136, 504, 610, 1882
Hpy166II GTNNAC 4 cut(s) 332, 655, 1645, 1796
Hpy188I TCNGA 9 cut(s) 442, 455, 747, 898, 1314, 1335, 1457, 2384, 2523
Hpy8I GTNNAC 4 cut(s) 332, 655, 1645, 1796
HpyAV CCTTC 9 cut(s) 356, 1391, 1416, 1784, 2243, 2404, 2598, 2626, 2848
HpyCH4III ACNGT 6 cut(s) 420, 706, 1295, 1777, 2117, 2388
HpyCH4IV ACGT 2 cut(s) 107, 2799
HpyF10VI GCNNNNNNNGC 6 cut(s) 102, 1157, 1166, 1175, 2129, 2622
HpySE526I ACGT 2 cut(s) 107, 2799
Hsp92I GRCGYC 1 cut(s) 2799
HspAI GCGC 4 cut(s) 181, 547, 1167, 2614
KpnI GGTACC 1 cut(s) 865
Ksp22I TGATCA 2 cut(s) 469, 1252
KspAI GTTAAC 1 cut(s) 1645
LmnI GCTCC 6 cut(s) 738, 1232, 1892, 2085, 2305, 2579
LweI GCATC 9 cut(s) 192, 199, 274, 372, 558, 652, 895, 1347, 1536
MabI ACCWGGT 3 cut(s) 594, 2376, 2448
MaeI CTAG 7 cut(s) 858, 1175, 1566, 1910, 2423, 2594, 2849
MaeII ACGT 2 cut(s) 107, 2799
MaeIII GTNAC 4 cut(s) 108, 1289, 1448, 2563
MfeI CAATTG 1 cut(s) 1152
MflI RGATCY 2 cut(s) 2088, 2416
MhlI GDGCHC 3 cut(s) 1029, 1798, 2302
MlsI TGGCCA 1 cut(s) 1160
MluNI TGGCCA 1 cut(s) 1160
MlyI GAGTC 5 cut(s) 1045, 1091, 1669, 2021, 2410
Mox20I TGGCCA 1 cut(s) 1160
Mph1103I ATGCAT 1 cut(s) 813
MscI TGGCCA 1 cut(s) 1160
MslI CAYNNNNRTG 5 cut(s) 89, 368, 1124, 1935, 2721
Msp20I TGGCCA 1 cut(s) 1160
MspA1I CMGCKG 1 cut(s) 401
MspI CCGG 2 cut(s) 1758, 2054
MspR9I CCNGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
MunI CAATTG 1 cut(s) 1152
Mva1269I GAATGC 1 cut(s) 191
MvaI CCWGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
MwoI GCNNNNNNNGC 6 cut(s) 102, 1157, 1166, 1175, 2129, 2622
NdeI CATATG 2 cut(s) 1368, 2017
NlaIV GGNNCC 6 cut(s) 783, 863, 1001, 2197, 2418, 2637
NsiI ATGCAT 1 cut(s) 813
NspI RCATGY 4 cut(s) 695, 811, 1012, 1940
NspV TTCGAA 1 cut(s) 1627
PaeI GCATGC 1 cut(s) 811
PagI TCATGA 2 cut(s) 271, 369
PcsI WCGNNNNNNNCGW 1 cut(s) 943
PctI GAATGC 1 cut(s) 191
PfeI GAWTC 7 cut(s) 601, 676, 1043, 1480, 1718, 1966, 2050
PflFI GACNNNGTC 1 cut(s) 1980
PflMI CCANNNNNTGG 2 cut(s) 611, 2726
PinAI ACCGGT 1 cut(s) 1757
PleI GAGTC 5 cut(s) 1045, 1090, 1669, 2020, 2409
PpsI GAGTC 5 cut(s) 1045, 1090, 1669, 2020, 2409
PpuMI RGGWCCY 1 cut(s) 2635
PshBI ATTAAT 2 cut(s) 1376, 2702
PsiI TTATAA 1 cut(s) 2175
Psp5II RGGWCCY 1 cut(s) 2635
Psp6I CCWGG 6 cut(s) 150, 186, 594, 1989, 2376, 2448
PspEI GGTNACC 1 cut(s) 2563
PspGI CCWGG 6 cut(s) 150, 186, 594, 1989, 2376, 2448
PspN4I GGNNCC 6 cut(s) 783, 863, 1001, 2197, 2418, 2637
PspPI GGNCC 3 cut(s) 1921, 2196, 2635
PspPPI RGGWCCY 1 cut(s) 2635
PstI CTGCAG 2 cut(s) 1444, 1656
PsuI RGATCY 2 cut(s) 2088, 2416
PsyI GACNNNGTC 1 cut(s) 1980
PvuII CAGCTG 1 cut(s) 401
RsaI GTAC 8 cut(s) 690, 863, 1173, 1606, 1662, 1847, 2427, 2454
RsaNI GTAC 8 cut(s) 689, 862, 1172, 1605, 1661, 1846, 2426, 2453
RseI CAYNNNNRTG 5 cut(s) 89, 368, 1124, 1935, 2721
Sau96I GGNCC 3 cut(s) 1921, 2196, 2635
SchI GAGTC 5 cut(s) 1045, 1091, 1669, 2021, 2410
ScrFI CCNGG 6 cut(s) 152, 188, 596, 1991, 2378, 2450
SduI GDGCHC 3 cut(s) 1029, 1798, 2302
SexAI ACCWGGT 3 cut(s) 594, 2376, 2448
SfaNI GCATC 9 cut(s) 192, 199, 274, 372, 558, 652, 895, 1347, 1536
SfcI CTRYAG 3 cut(s) 416, 1440, 1652
SfuI TTCGAA 1 cut(s) 1627
SinI GGWCC 2 cut(s) 1921, 2635
SmiMI CAYNNNNRTG 5 cut(s) 89, 368, 1124, 1935, 2721
SmlI CTYRAG 5 cut(s) 196, 1841, 1855, 1970, 2675
SmoI CTYRAG 5 cut(s) 196, 1841, 1855, 1970, 2675
SphI GCATGC 1 cut(s) 811
SspI AATATT 1 cut(s) 2845
SspMI CTAG 7 cut(s) 858, 1175, 1566, 1910, 2423, 2594, 2849
StyD4I CCNGG 6 cut(s) 150, 186, 594, 1989, 2376, 2448
StyI CCWWGG 1 cut(s) 1917
TaaI ACNGT 6 cut(s) 420, 706, 1295, 1777, 2117, 2388
TaiI ACGT 2 cut(s) 110, 2802
TaqI TCGA 7 cut(s) 712, 946, 1114, 1499, 1627, 2685, 2835
TatI WGTACW 3 cut(s) 1171, 1660, 2425
TfiI GAWTC 7 cut(s) 601, 676, 1043, 1480, 1718, 1966, 2050
TscAI CASTG 5 cut(s) 709, 1300, 2122, 2360, 2744
TspGWI ACGGA 2 cut(s) 1260, 2203
TspRI CASTG 5 cut(s) 709, 1300, 2122, 2360, 2744
Tth111I GACNNNGTC 1 cut(s) 1980
Van91I CCANNNNNTGG 2 cut(s) 611, 2726
VneI GTGCAC 1 cut(s) 1794
VpaK11BI GGWCC 2 cut(s) 1921, 2635
VspI ATTAAT 2 cut(s) 1376, 2702
XapI RAATTY 3 cut(s) 296, 1096, 1878
XbaI TCTAGA 2 cut(s) 1565, 2593
XceI RCATGY 4 cut(s) 695, 811, 1012, 1940
XcmI CCANNNNNNNNNTGG 1 cut(s) 1044
XmiI GTMKAC 1 cut(s) 654
XspI CTAG 7 cut(s) 858, 1175, 1566, 1910, 2423, 2594, 2849
ZraI GACGTC 1 cut(s) 2800
Zsp2I ATGCAT 1 cut(s) 813
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.