Prupe.7G052100_v2.0.a1

Glucan endo-1,3-beta-glucosidase, basic

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
8996096 .. 8997828
1733 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G052100.1

Sequence Viewer

Length: 1035 bp
ATGGCCAAGTCACATGTAGTTGGCAAAAGCCCTTCCATGGTTTCCATAATGCTGCTTTGTGGTCTGCTAATGGCTACCCTTGCCACAACAGAAGCAATTGGTGTTTGTTATGGAACACTTGGAGACAACTTACCTCCACCAGGAGAAGTAATAGCTCTCTACAAGCAATACAACATCCAAAGAATGAGGCTCTATGCTCCTAACTTTGACGCACTCCAAGCCCTCCAAGGCTCCCCAATTGAGCTCATTCTAGGTGTAGAAAATGAGCGCCTTGAAGACATTTCTTCTAGCCAAGCCAGTGCAGATGATTGGGTCCAAAAGAATGTCCAAAGCTATAGCAATGTCAATTTCAAATACATTGCGGTTGGAAATGAAGTAAAAGCCTCAGAAGCACCCTTTGTTGGCCCAGCAATGGACAAAATTCAAAATGCAATTTCTAAGGCTGGTCTTGCAAACAAAATCAAAGTCTCCACTGCGGTTCACCCTGTAATTCTTGAAAAATCCTTCCCTCCATCAGAGGGCTCATTCGGGCAAGACTATCGTCCATTTCTGGATCCGATCATCAGCTTCTTAGTGCAAAACAAATCTCCGTTACTCTTTAACATGTACCCGTATTTCAGTTACATTGGCGATCGCAACAATATTAAACTTGAGTATGCTCTTTTTACATCTCCCTCAGTTGTAGTGAATGATGGGCAGCTAGGGTATCAAAACCTGTTTGATGCACTCTTGGATGCGGCTTACTCAGCATTAGAGAAGGCTGGAGGCGGTTCTCTAGAAATCGTCGTATCAGAGACTGGTTGGCCCTCGGCTGGCGGGGATGGGACAGTGACAACGATGGAGAATGCGAGAATTTACAACTCAAATTTGATCCAGCACGTGAAGGGAGGGACGCCAAAGAGACCTGGAGGCCCCATAGAGACTTATATATTTGCCATGTTTAATGAGAATCAGAAACCTGGAGAAGAGACTGAGAGAAACTTTGGGCTGTTCTTTCCAAACAAACAGCCTGTATATCCCATTGATTTCAATTAA

Protein Analysis

345

Amino Acids

37.55

Weight (kDa)

5.05

Isoelectric Point (pI)

44.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000485)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16260 AT4G16260
fragaria_vesca FvH4_4g19500 FvH4_5g06210 FvH4_6g24640 FvH4_6g24680 FvH4_6g37200 FvH4_6g37201 FvH4_6g37370
malus_domestica MD12G1083900.v1.1 MD12G1084100.v1.1
prunus_persica Prupe.1G121800_v2.0.a1 Prupe.7G051600_v2.0.a1 Prupe.7G052100_v2.0.a1
pyrus_communis pycom12g07050 pycom12g07100
rosa_chinensis RchiOBHm_Chr2g0149871 RchiOBHm_Chr2g0149881 RchiOBHm_Chr3g0484031 RchiOBHm_Chr3g0484041 RchiOBHm_Chr3g0484071 RchiOBHm_Chr3g0484141 RchiOBHm_Chr3g0484181 RchiOBHm_Chr3g0484211 RchiOBHm_Chr3g0484221 RchiOBHm_Chr3g0484251 RchiOBHm_Chr4g0424631 RchiOBHm_Chr7g0178181
rosa_laevigata RLG00000007444 RLG00000007447 RLG00000020451 RLG00000020452 RLG00000023238 RLG00000023240 RLG00000023241 RLG00000023243
rosa_multiflora Rmu_co8177358.1_g000001 Rmu_co8303623.1_g000001 Rmu_co8339607.1_g000001 Rmu_sc0000730.1_g000027 Rmu_sc0001899.1_g000006 Rmu_sc0001899.1_g000012 Rmu_sc0003477.1_g000003 Rmu_sc0003477.1_g000011 Rmu_sc0006371.1_g000005 Rmu_sc0007329.1_g000005 Rmu_sc0007855.1_g000006 Rmu_sc0017706.1_g000001 Rmu_ssc0000308.1_g000021 Rmu_ssc0000308.1_g000028
rosa_roxburghii Rroxscaffold_2G00097590 Rroxscaffold_5G00366550 Rroxscaffold_6G00397840 Rroxscaffold_6G00397890
rosa_rugosa Rorug02G0417000 Rorug02G0417000 Rorug03G0210200 Rorug03G0210400 Rorug04G0198700 Rorug06G0413900
rosa_samantha Rh2AG476400 Rh2BG487900 Rh2BG488000 Rh2CG461800 Rh2DG496700 Rh2DG497100 Rh3AG259000 Rh3AG259200 Rh3BG295300 Rh3BG295500 Rh3BG295600 Rh3BG295900 Rh3CG292800 Rh3CG292900 Rh3CG293300 Rh3DG288600 Rh3DG289100 Rh3DG289300 Rh4AG255300 Rh4BG260800 Rh4CG272000 Rh4DG255500 Rh7AG013600
rosa_wichuraiana Rw2G038830 Rw3G023320 Rw3G023360 Rw3G023370 Rw3G023380 Rw4G022070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 362, 476, 737, 768, 816
AclWI GGATC 3 cut(s) 548, 561, 865
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 420, 852, 865
AcvI CACGTG 1 cut(s) 880
AcyI GRCGYC 1 cut(s) 893
AfaI GTAC 1 cut(s) 608
AfiI CCNNNNNNNGG 6 cut(s) 37, 140, 401, 412, 518, 812
AflIII ACRYGT 2 cut(s) 13, 603
AgsI TTSAA 5 cut(s) 275, 352, 425, 497, 1030
AjnI CCWGG 3 cut(s) 139, 904, 958
AluBI AGCT 5 cut(s) 155, 244, 333, 567, 700
AluI AGCT 5 cut(s) 155, 244, 333, 567, 700
Alw21I GWGCWC 1 cut(s) 246
Alw26I GTCTC 6 cut(s) 117, 472, 788, 895, 914, 962
AlwI GGATC 3 cut(s) 548, 561, 865
AlwNI CAGNNNCTG 1 cut(s) 797
AoxI GGCC 4 cut(s) 3, 403, 803, 910
ApeKI GCWGC 2 cut(s) 52, 697
ApoI RAATTY 3 cut(s) 420, 852, 865
ArsI GACNNNNNNTTYG 2 cut(s) 450, 482
AsiSI GCGATCGC 1 cut(s) 634
AspLEI GCGC 1 cut(s) 270
AspS9I GGNCC 4 cut(s) 313, 404, 804, 911
AsuHPI GGTGA 1 cut(s) 473
AvaII GGWCC 1 cut(s) 313
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 553
BanII GRGCYC 2 cut(s) 246, 524
BbrPI CACGTG 1 cut(s) 880
BbsI GAAGAC 1 cut(s) 282
Bbv12I GWGCWC 1 cut(s) 246
BbvI GCAGC 2 cut(s) 39, 709
BccI CCATC 4 cut(s) 520, 686, 815, 832
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciT130I CCWGG 3 cut(s) 141, 906, 960
BcoDI GTCTC 6 cut(s) 117, 472, 788, 895, 914, 962
BfaI CTAG 4 cut(s) 251, 288, 701, 776
BfmI CTRYAG 1 cut(s) 334
BfoI RGCGCY 1 cut(s) 271
BisI GCNGC 3 cut(s) 53, 698, 738
BlsI GCNGC 3 cut(s) 54, 699, 739
Bme1390I CCNGG 3 cut(s) 141, 906, 960
Bme18I GGWCC 1 cut(s) 313
BmgT120I GGNCC 4 cut(s) 313, 404, 804, 911
BmiI GGNNCC 4 cut(s) 232, 314, 555, 913
BmrFI CCNGG 3 cut(s) 141, 906, 960
BmsI GCATC 2 cut(s) 712, 724
BoxI GACNNNNGTC 1 cut(s) 540
BpiI GAAGAC 1 cut(s) 282
BpmI CTGGAG 3 cut(s) 783, 927, 981
BpuEI CTTGAG 1 cut(s) 671
BsaAI YACGTR 1 cut(s) 880
BsaHI GRCGYC 1 cut(s) 893
BsaI GGTCTC 1 cut(s) 895
BsaJI CCNNGG 3 cut(s) 36, 226, 807
Bsc4I CCNNNNNNNGG 6 cut(s) 37, 140, 401, 412, 518, 812
Bse1I ACTGG 2 cut(s) 297, 802
Bse3DI GCAATG 3 cut(s) 346, 357, 417
BseBI CCWGG 3 cut(s) 141, 906, 960
BseDI CCNNGG 3 cut(s) 36, 226, 807
BseGI GGATG 3 cut(s) 174, 739, 826
BseLI CCNNNNNNNGG 6 cut(s) 37, 140, 401, 412, 518, 812
BseMI GCAATG 3 cut(s) 346, 357, 417
BseMII CTCAG 4 cut(s) 399, 690, 759, 963
BseNI ACTGG 2 cut(s) 297, 802
BseXI GCAGC 2 cut(s) 39, 709
BseYI CCCAGC 1 cut(s) 406
BsgI GTGCAG 1 cut(s) 321
Bsh1285I CGRYCG 1 cut(s) 634
BshFI GGCC 4 cut(s) 5, 405, 805, 912
BsiEI CGRYCG 1 cut(s) 634
BsiHKAI GWGCWC 1 cut(s) 246
BslFI GGGAC 2 cut(s) 838, 904
BslI CCNNNNNNNGG 6 cut(s) 37, 140, 401, 412, 518, 812
BsmAI GTCTC 6 cut(s) 117, 472, 788, 895, 914, 962
BsmFI GGGAC 2 cut(s) 838, 904
BsmI GAATGC 1 cut(s) 850
BsnI GGCC 4 cut(s) 5, 405, 805, 912
Bso31I GGTCTC 1 cut(s) 895
Bsp1286I GDGCHC 2 cut(s) 246, 524
Bsp143I GATC 4 cut(s) 553, 558, 631, 870
Bsp19I CCATGG 1 cut(s) 36
BspACI CCGC 5 cut(s) 362, 476, 737, 768, 816
BspANI GGCC 4 cut(s) 5, 405, 805, 912
BspCNI CTCAG 4 cut(s) 398, 689, 758, 964
BspLI GGNNCC 4 cut(s) 232, 314, 555, 913
BspPI GGATC 3 cut(s) 548, 561, 865
BspTNI GGTCTC 1 cut(s) 895
BsrDI GCAATG 3 cut(s) 346, 357, 417
BsrI ACTGG 2 cut(s) 297, 802
BssECI CCNNGG 3 cut(s) 36, 226, 807
BssMI GATC 4 cut(s) 553, 558, 631, 870
BssNI GRCGYC 1 cut(s) 893
BssT1I CCWWGG 2 cut(s) 36, 226
Bst2UI CCWGG 3 cut(s) 141, 906, 960
Bst4CI ACNGT 1 cut(s) 829
Bst6I CTCTTC 1 cut(s) 960
BstACI GRCGYC 1 cut(s) 893
BstBAI YACGTR 1 cut(s) 880
BstC8I GCNNGC 1 cut(s) 814
BstDEI CTNAG 6 cut(s) 385, 438, 571, 676, 745, 972
BstDSI CCRYGG 1 cut(s) 36
BstENI CCTNNNNNAGG 1 cut(s) 138
BstF5I GGATG 3 cut(s) 174, 739, 826
BstH2I RGCGCY 1 cut(s) 271
BstHHI GCGC 1 cut(s) 270
BstKTI GATC 4 cut(s) 556, 561, 634, 873
BstMAI GTCTC 6 cut(s) 117, 472, 788, 895, 914, 962
BstMBI GATC 4 cut(s) 553, 558, 631, 870
BstMCI CGRYCG 1 cut(s) 634
BstMWI GCNNNNNNNGC 5 cut(s) 80, 218, 389, 449, 746
BstNI CCWGG 3 cut(s) 141, 906, 960
BstNSI RCATGY 2 cut(s) 17, 607
BstPAI GACNNNNGTC 1 cut(s) 540
BstSCI CCNGG 3 cut(s) 139, 904, 958
BstSFI CTRYAG 1 cut(s) 334
BstV1I GCAGC 2 cut(s) 39, 709
BstV2I GAAGAC 1 cut(s) 282
BstX2I RGATCY 1 cut(s) 553
BstYI RGATCY 1 cut(s) 553
BsuRI GGCC 4 cut(s) 5, 405, 805, 912
BtgI CCRYGG 1 cut(s) 36
BtsCI GGATG 3 cut(s) 174, 739, 826
BtsI GCAGTG 1 cut(s) 471
BtsIMutI CAGTG 3 cut(s) 304, 471, 834
Cac8I GCNNGC 1 cut(s) 814
CaiI CAGNNNCTG 1 cut(s) 797
CfoI GCGC 1 cut(s) 270
Cfr13I GGNCC 4 cut(s) 313, 404, 804, 911
CseI GACGC 2 cut(s) 218, 901
Csp6I GTAC 1 cut(s) 607
CviAII CATG 4 cut(s) 14, 37, 604, 937
CviQI GTAC 1 cut(s) 607
DdeI CTNAG 6 cut(s) 385, 438, 571, 676, 745, 972
DpnI GATC 4 cut(s) 555, 560, 633, 872
DpnII GATC 4 cut(s) 553, 558, 631, 870
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 960
EarI CTCTTC 1 cut(s) 960
Ecl136II GAGCTC 1 cut(s) 244
Eco130I CCWWGG 2 cut(s) 36, 226
Eco24I GRGCYC 2 cut(s) 246, 524
Eco31I GGTCTC 1 cut(s) 895
Eco47I GGWCC 1 cut(s) 313
Eco53kI GAGCTC 1 cut(s) 244
Eco72I CACGTG 1 cut(s) 880
EcoICRI GAGCTC 1 cut(s) 244
EcoNI CCTNNNNNAGG 1 cut(s) 138
EcoO109I RGGNCCY 1 cut(s) 911
EcoRII CCWGG 3 cut(s) 139, 904, 958
EcoT14I CCWWGG 2 cut(s) 36, 226
EcoT38I GRGCYC 2 cut(s) 246, 524
ErhI CCWWGG 2 cut(s) 36, 226
FaeI CATG 4 cut(s) 17, 40, 607, 940
FaqI GGGAC 2 cut(s) 838, 904
FatI CATG 4 cut(s) 13, 36, 603, 936
FauI CCCGC 1 cut(s) 809
Fnu4HI GCNGC 3 cut(s) 53, 698, 738
FokI GGATG 3 cut(s) 161, 746, 833
FriOI GRGCYC 2 cut(s) 246, 524
Fsp4HI GCNGC 3 cut(s) 53, 698, 738
FspBI CTAG 4 cut(s) 251, 288, 701, 776
GlaI GCGC 1 cut(s) 269
GluI GCNGC 3 cut(s) 53, 698, 738
GsaI CCCAGC 1 cut(s) 410
GsuI CTGGAG 3 cut(s) 783, 927, 981
HaeII RGCGCY 1 cut(s) 271
HaeIII GGCC 4 cut(s) 5, 405, 805, 912
HgaI GACGC 2 cut(s) 218, 901
HhaI GCGC 1 cut(s) 270
Hin1I GRCGYC 1 cut(s) 893
Hin1II CATG 4 cut(s) 17, 40, 607, 940
Hin6I GCGC 1 cut(s) 268
HinP1I GCGC 1 cut(s) 268
HinfI GANTC 1 cut(s) 949
HphI GGTGA 1 cut(s) 473
Hpy166II GTNNAC 1 cut(s) 481
Hpy188I TCNGA 5 cut(s) 388, 517, 558, 793, 954
Hpy188III TCNNGA 3 cut(s) 494, 551, 776
Hpy8I GTNNAC 1 cut(s) 481
Hpy99I CGWCG 1 cut(s) 788
HpyAV CCTTC 4 cut(s) 42, 514, 751, 877
HpyCH4III ACNGT 1 cut(s) 829
HpyCH4IV ACGT 1 cut(s) 879
HpyCH4V TGCA 5 cut(s) 302, 431, 452, 577, 725
HpyF10VI GCNNNNNNNGC 5 cut(s) 80, 218, 389, 449, 746
HpyF3I CTNAG 6 cut(s) 385, 438, 571, 676, 745, 972
HpySE526I ACGT 1 cut(s) 879
Hsp92I GRCGYC 1 cut(s) 893
Hsp92II CATG 4 cut(s) 17, 40, 607, 940
HspAI GCGC 1 cut(s) 268
Kzo9I GATC 4 cut(s) 553, 558, 631, 870
LmnI GCTCC 2 cut(s) 202, 236
Lsp1109I GCAGC 2 cut(s) 39, 709
LweI GCATC 2 cut(s) 712, 724
MaeI CTAG 4 cut(s) 251, 288, 701, 776
MaeII ACGT 1 cut(s) 879
MaeIII GTNAC 4 cut(s) 9, 591, 620, 829
MalI GATC 4 cut(s) 555, 560, 633, 872
MboI GATC 4 cut(s) 553, 558, 631, 870
MboII GAAGA 3 cut(s) 276, 287, 977
MfeI CAATTG 2 cut(s) 96, 237
MflI RGATCY 1 cut(s) 553
MhlI GDGCHC 2 cut(s) 246, 524
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 96, 237, 346, 420, 432, 489, 852, 865, 1030
MluNI TGGCCA 1 cut(s) 5
MmeI TCCRAC 1 cut(s) 346
Mox20I TGGCCA 1 cut(s) 5
MscI TGGCCA 1 cut(s) 5
MseI TTAA 4 cut(s) 600, 645, 942, 1033
Msp20I TGGCCA 1 cut(s) 5
MspR9I CCNGG 3 cut(s) 141, 906, 960
MunI CAATTG 2 cut(s) 96, 237
Mva1269I GAATGC 1 cut(s) 850
MvaI CCWGG 3 cut(s) 141, 906, 960
MwoI GCNNNNNNNGC 5 cut(s) 80, 218, 389, 449, 746
NcoI CCATGG 1 cut(s) 36
NdeII GATC 4 cut(s) 553, 558, 631, 870
NlaIII CATG 4 cut(s) 17, 40, 607, 940
NlaIV GGNNCC 4 cut(s) 232, 314, 555, 913
NmeAIII GCCGAG 1 cut(s) 788
NmuCI GTSAC 2 cut(s) 9, 829
NspI RCATGY 2 cut(s) 17, 607
PciI ACATGT 2 cut(s) 13, 603
PctI GAATGC 1 cut(s) 850
PfeI GAWTC 1 cut(s) 949
PkrI GCNGC 3 cut(s) 54, 699, 739
Ple19I CGATCG 1 cut(s) 634
PmaCI CACGTG 1 cut(s) 880
PmlI CACGTG 1 cut(s) 880
Ppu21I YACGTR 1 cut(s) 880
PscI ACATGT 2 cut(s) 13, 603
PshAI GACNNNNGTC 1 cut(s) 540
Psp124BI GAGCTC 1 cut(s) 246
Psp6I CCWGG 3 cut(s) 139, 904, 958
PspCI CACGTG 1 cut(s) 880
PspFI CCCAGC 1 cut(s) 406
PspGI CCWGG 3 cut(s) 139, 904, 958
PspN4I GGNNCC 4 cut(s) 232, 314, 555, 913
PspPI GGNCC 4 cut(s) 313, 404, 804, 911
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 1 cut(s) 553
PvuI CGATCG 1 cut(s) 634
RgaI GCGATCGC 1 cut(s) 634
RsaI GTAC 1 cut(s) 608
RsaNI GTAC 1 cut(s) 607
SacI GAGCTC 1 cut(s) 246
SaqAI TTAA 4 cut(s) 600, 645, 942, 1033
SatI GCNGC 3 cut(s) 53, 698, 738
Sau3AI GATC 4 cut(s) 553, 558, 631, 870
Sau96I GGNCC 4 cut(s) 313, 404, 804, 911
ScrFI CCNGG 3 cut(s) 141, 906, 960
SduI GDGCHC 2 cut(s) 246, 524
SfaAI GCGATCGC 1 cut(s) 634
SfaNI GCATC 2 cut(s) 712, 724
SfcI CTRYAG 1 cut(s) 334
SgfI GCGATCGC 1 cut(s) 634
SinI GGWCC 1 cut(s) 313
SmlI CTYRAG 1 cut(s) 650
SmoI CTYRAG 1 cut(s) 650
Sse9I AATT 9 cut(s) 96, 237, 346, 420, 432, 489, 852, 865, 1030
SsiI CCGC 5 cut(s) 362, 476, 737, 768, 816
SspI AATATT 1 cut(s) 643
SspMI CTAG 4 cut(s) 251, 288, 701, 776
SstI GAGCTC 1 cut(s) 246
StyD4I CCNGG 3 cut(s) 139, 904, 958
StyI CCWWGG 2 cut(s) 36, 226
TaaI ACNGT 1 cut(s) 829
TaiI ACGT 1 cut(s) 882
TasI AATT 9 cut(s) 96, 237, 346, 420, 432, 489, 852, 865, 1030
TauI GCSGC 1 cut(s) 740
TfiI GAWTC 1 cut(s) 949
Tru1I TTAA 4 cut(s) 600, 645, 942, 1033
Tru9I TTAA 4 cut(s) 600, 645, 942, 1033
TscAI CASTG 3 cut(s) 304, 478, 834
TseFI GTSAC 2 cut(s) 9, 829
TseI GCWGC 2 cut(s) 52, 697
Tsp45I GTSAC 2 cut(s) 9, 829
TspDTI ATGAA 1 cut(s) 387
TspGWI ACGGA 1 cut(s) 579
TspRI CASTG 3 cut(s) 304, 478, 834
VpaK11BI GGWCC 1 cut(s) 313
XagI CCTNNNNNAGG 1 cut(s) 138
XapI RAATTY 3 cut(s) 420, 852, 865
XbaI TCTAGA 1 cut(s) 775
XceI RCATGY 2 cut(s) 17, 607
XspI CTAG 4 cut(s) 251, 288, 701, 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.