RchiOBHm_Chr5g0035751

anion transporter 3

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
29754898 .. 29756195
1298 bp
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UTR
Exon/CDS
Intron
PRQ31459

Sequence Viewer

Length: 198 bp
ATGTGTACCAAACAGTCTATTGGTTTCATTGGGCCTGGAGTGTCATTGTTGTGCTTGAACTATGCCAATACACCCACGGCTACAGCGGTACTCCTTACAGCAGCCTTATGTTTGAGCTATTTCAGTCAAGCTGGCTTTCTCCTCAATATACAATGCTGGAGTAGAACCAAATGTTCACACATATGGGGCACTGATTGA

Protein Analysis

65

Amino Acids

7.0

Weight (kDa)

8.37

Isoelectric Point (pI)

52.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 86
AfaI GTAC 2 cut(s) 7, 90
AgsI TTSAA 1 cut(s) 58
AjnI CCWGG 1 cut(s) 34
AluBI AGCT 2 cut(s) 117, 131
AluI AGCT 2 cut(s) 117, 131
AoxI GGCC 1 cut(s) 32
ApeKI GCWGC 1 cut(s) 101
AspS9I GGNCC 1 cut(s) 32
BaeGI GKGCMC 1 cut(s) 191
BbvI GCAGC 1 cut(s) 113
BceAI ACGGC 1 cut(s) 93
BciT130I CCWGG 1 cut(s) 36
BfmI CTRYAG 1 cut(s) 81
BisI GCNGC 1 cut(s) 102
BlsI GCNGC 1 cut(s) 103
Bme1390I CCNGG 1 cut(s) 36
BmgT120I GGNCC 1 cut(s) 32
BmrFI CCNGG 1 cut(s) 36
BpmI CTGGAG 2 cut(s) 57, 178
BsaJI CCNNGG 1 cut(s) 75
BseBI CCWGG 1 cut(s) 36
BseDI CCNNGG 1 cut(s) 75
BseRI GAGGAG 1 cut(s) 131
BseSI GKGCMC 1 cut(s) 191
BseXI GCAGC 1 cut(s) 113
BshFI GGCC 1 cut(s) 34
BsnI GGCC 1 cut(s) 34
Bsp1286I GDGCHC 1 cut(s) 191
BspACI CCGC 1 cut(s) 86
BspANI GGCC 1 cut(s) 34
BssECI CCNNGG 1 cut(s) 75
Bst2UI CCWGG 1 cut(s) 36
Bst4CI ACNGT 1 cut(s) 15
BstC8I GCNNGC 1 cut(s) 133
BstDSI CCRYGG 1 cut(s) 75
BstNI CCWGG 1 cut(s) 36
BstSCI CCNGG 1 cut(s) 34
BstSFI CTRYAG 1 cut(s) 81
BstSLI GKGCMC 1 cut(s) 191
BstV1I GCAGC 1 cut(s) 113
BsuRI GGCC 1 cut(s) 34
BtgI CCRYGG 1 cut(s) 75
BtsIMutI CAGTG 1 cut(s) 189
Cac8I GCNNGC 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 32
Csp6I GTAC 2 cut(s) 6, 89
CviJI RGCY 6 cut(s) 34, 80, 104, 117, 131, 135
CviKI_1 RGCY 6 cut(s) 34, 80, 104, 117, 131, 135
CviQI GTAC 2 cut(s) 6, 89
EcoRII CCWGG 1 cut(s) 34
FaiI YATR 5 cut(s) 63, 109, 149, 182, 184
FauNDI CATATG 1 cut(s) 182
Fnu4HI GCNGC 1 cut(s) 102
Fsp4HI GCNGC 1 cut(s) 102
GluI GCNGC 1 cut(s) 102
GsuI CTGGAG 2 cut(s) 57, 178
HaeIII GGCC 1 cut(s) 34
Hpy166II GTNNAC 2 cut(s) 6, 176
Hpy8I GTNNAC 2 cut(s) 6, 176
HpyCH4III ACNGT 1 cut(s) 15
LpnPI CCDG 4 cut(s) 21, 48, 117, 142
Lsp1109I GCAGC 1 cut(s) 113
MhlI GDGCHC 1 cut(s) 191
MnlI CCTC 1 cut(s) 152
MslI CAYNNNNRTG 2 cut(s) 49, 181
MspA1I CMGCKG 1 cut(s) 86
MspR9I CCNGG 1 cut(s) 36
MvaI CCWGG 1 cut(s) 36
NdeI CATATG 1 cut(s) 182
PkrI GCNGC 1 cut(s) 103
Psp6I CCWGG 1 cut(s) 34
PspGI CCWGG 1 cut(s) 34
PspPI GGNCC 1 cut(s) 32
RsaI GTAC 2 cut(s) 7, 90
RsaNI GTAC 2 cut(s) 6, 89
RseI CAYNNNNRTG 2 cut(s) 49, 181
SatI GCNGC 1 cut(s) 102
Sau96I GGNCC 1 cut(s) 32
ScrFI CCNGG 1 cut(s) 36
SduI GDGCHC 1 cut(s) 191
SetI ASST 2 cut(s) 119, 133
SfcI CTRYAG 1 cut(s) 81
SgeI CNNG 7 cut(s) 47, 48, 67, 88, 140, 144, 169
SmiMI CAYNNNNRTG 2 cut(s) 49, 181
SsiI CCGC 1 cut(s) 86
StyD4I CCNGG 1 cut(s) 34
TaaI ACNGT 1 cut(s) 15
TscAI CASTG 1 cut(s) 196
TseI GCWGC 1 cut(s) 101
TspDTI ATGAA 1 cut(s) 16
TspRI CASTG 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.