RLG00000032312

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
13413453 .. 13414586
1134 bp
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UTR
Exon/CDS
Intron
RLM00000032312

Sequence Viewer

Length: 450 bp
ATGTCGCAGGGGTGTCGGCAGGGGCCTCGGCAGACGTCGGCAGCTATCGGCAGCTATCGGCAGGTGTGTGCAGGGCTGTCGGCAGCTTCTCGGCAGGGGCCTCGGCAGGTGTCGGCAGGTGCTAGGCAGCTATCGGCAGGTGCTCGGCAGGTGTCGACAGGTCTCGGCAGGTGCTCGGCAGGTGTCGGCAGGTGCTCGGCAGGTGTCGGGCAGGTGTCGGCAGGTGTCGGCAGGTGTCGGCAGATGCTCGGCAGGTCTCGGCAGGTGTCGGCAGGTGCTCGGCAGGTGCTCGGCAGGTGTCGGCAGGTGCTCGGCAGGTCTCGGGCAGGTGTCGGCAGGTGCGCGGCAGGTGTCGGCAGGTGCTCGGCAGGTCTCGGCAGATGCTCGGCAGGGGGTCGGCAGCTCTCGGCAGGTGTCGAAGCTTTGGCTAGTTCTTCTGCTTCGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

150

Amino Acids

14.68

Weight (kDa)

11.92

Isoelectric Point (pI)

32.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 38
AccI GTMKAC 1 cut(s) 155
AccII CGCG 1 cut(s) 344
AciI CCGC 1 cut(s) 344
AcyI GRCGYC 1 cut(s) 35
AluBI AGCT 6 cut(s) 44, 54, 86, 130, 403, 422
AluI AGCT 6 cut(s) 44, 54, 86, 130, 403, 422
Alw21I GWGCWC 7 cut(s) 145, 176, 197, 280, 291, 312, 365
Alw26I GTCTC 4 cut(s) 167, 261, 324, 377
Ama87I CYCGRG 1 cut(s) 321
AoxI GGCC 2 cut(s) 23, 98
ApeKI GCWGC 5 cut(s) 41, 51, 83, 127, 400
AspLEI GCGC 1 cut(s) 344
AspS9I GGNCC 2 cut(s) 23, 98
AvaI CYCGRG 1 cut(s) 321
Bbv12I GWGCWC 7 cut(s) 145, 176, 197, 280, 291, 312, 365
BbvI GCAGC 5 cut(s) 53, 63, 95, 139, 412
BcgI CGANNNNNNTGC 7 cut(s) 8, 30, 42, 60, 83, 94, 117
BcoDI GTCTC 4 cut(s) 167, 261, 324, 377
BfaI CTAG 2 cut(s) 123, 429
BisI GCNGC 6 cut(s) 42, 52, 84, 128, 345, 401
BlsI GCNGC 6 cut(s) 43, 53, 85, 129, 346, 402
BmeT110I CYCGRG 1 cut(s) 321
BmgT120I GGNCC 2 cut(s) 23, 98
BmiI GGNNCC 2 cut(s) 24, 99
BmsI GCATC 2 cut(s) 234, 371
BsaHI GRCGYC 1 cut(s) 35
BsaI GGTCTC 4 cut(s) 167, 261, 324, 377
BsaJI CCNNGG 2 cut(s) 26, 101
BseDI CCNNGG 2 cut(s) 26, 101
BseXI GCAGC 5 cut(s) 53, 63, 95, 139, 412
BsgI GTGCAG 1 cut(s) 90
Bsh1236I CGCG 1 cut(s) 344
BshFI GGCC 2 cut(s) 25, 100
BsiHKAI GWGCWC 7 cut(s) 145, 176, 197, 280, 291, 312, 365
BsiHKCI CYCGRG 1 cut(s) 321
BsmAI GTCTC 4 cut(s) 167, 261, 324, 377
BsnI GGCC 2 cut(s) 25, 100
Bso31I GGTCTC 4 cut(s) 167, 261, 324, 377
BsoBI CYCGRG 1 cut(s) 321
Bsp1286I GDGCHC 7 cut(s) 145, 176, 197, 280, 291, 312, 365
BspACI CCGC 1 cut(s) 344
BspANI GGCC 2 cut(s) 25, 100
BspFNI CGCG 1 cut(s) 344
BspLI GGNNCC 2 cut(s) 24, 99
BspTNI GGTCTC 4 cut(s) 167, 261, 324, 377
BssECI CCNNGG 2 cut(s) 26, 101
BssNI GRCGYC 1 cut(s) 35
BstACI GRCGYC 1 cut(s) 35
BstFNI CGCG 1 cut(s) 344
BstHHI GCGC 1 cut(s) 344
BstMAI GTCTC 4 cut(s) 167, 261, 324, 377
BstUI CGCG 1 cut(s) 344
BstV1I GCAGC 5 cut(s) 53, 63, 95, 139, 412
BsuRI GGCC 2 cut(s) 25, 100
CfoI GCGC 1 cut(s) 344
Cfr13I GGNCC 2 cut(s) 23, 98
Eco31I GGTCTC 4 cut(s) 167, 261, 324, 377
Eco88I CYCGRG 1 cut(s) 321
EcoO109I RGGNCCY 2 cut(s) 23, 98
FblI GTMKAC 1 cut(s) 155
Fnu4HI GCNGC 6 cut(s) 42, 52, 84, 128, 345, 401
Fsp4HI GCNGC 6 cut(s) 42, 52, 84, 128, 345, 401
FspBI CTAG 2 cut(s) 123, 429
GlaI GCGC 1 cut(s) 343
GluI GCNGC 6 cut(s) 42, 52, 84, 128, 345, 401
HaeIII GGCC 2 cut(s) 25, 100
HhaI GCGC 1 cut(s) 344
Hin1I GRCGYC 1 cut(s) 35
Hin6I GCGC 1 cut(s) 342
HinP1I GCGC 1 cut(s) 342
HincII GTYRAC 1 cut(s) 156
HindII GTYRAC 1 cut(s) 156
HindIII AAGCTT 1 cut(s) 420
Hpy166II GTNNAC 1 cut(s) 156
Hpy8I GTNNAC 1 cut(s) 156
Hpy99I CGWCG 1 cut(s) 40
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 1 cut(s) 71
HpySE526I ACGT 1 cut(s) 35
Hsp92I GRCGYC 1 cut(s) 35
HspAI GCGC 1 cut(s) 342
Lsp1109I GCAGC 5 cut(s) 53, 63, 95, 139, 412
LweI GCATC 2 cut(s) 234, 371
MaeI CTAG 2 cut(s) 123, 429
MaeII ACGT 1 cut(s) 35
MboII GAAGA 1 cut(s) 426
MhlI GDGCHC 7 cut(s) 145, 176, 197, 280, 291, 312, 365
MnlI CCTC 2 cut(s) 36, 111
MvnI CGCG 1 cut(s) 344
NlaIV GGNNCC 2 cut(s) 24, 99
PkrI GCNGC 6 cut(s) 43, 53, 85, 129, 346, 402
PspN4I GGNNCC 2 cut(s) 24, 99
PspPI GGNCC 2 cut(s) 23, 98
SalI GTCGAC 1 cut(s) 154
SatI GCNGC 6 cut(s) 42, 52, 84, 128, 345, 401
Sau96I GGNCC 2 cut(s) 23, 98
SduI GDGCHC 7 cut(s) 145, 176, 197, 280, 291, 312, 365
SfaNI GCATC 2 cut(s) 234, 371
SsiI CCGC 1 cut(s) 344
SspMI CTAG 2 cut(s) 123, 429
TaiI ACGT 1 cut(s) 38
TaqI TCGA 2 cut(s) 155, 417
TauI GCSGC 1 cut(s) 347
TseI GCWGC 5 cut(s) 41, 51, 83, 127, 400
XmiI GTMKAC 1 cut(s) 155
XspI CTAG 2 cut(s) 123, 429
ZraI GACGTC 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.