Rh2AG625400

Protein of unknown function (DUF3754)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Reverse (-)
84917476 .. 84920212
2737 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG625400.1

Sequence Viewer

Length: 255 bp
ATGGGGGCAATGGGGCAGCGGTGCTTGGTGCTGGAGCAGAAGATCAACTTGGCTGCATATCAGAACCTAATAACCACACAGTCCATGTATGACAAGCAACTGGATAGCGGAAGGGGTAATCTTCTGATGATCTGGCCGGATAGGTGGTGTGAGGAACTCATTAAAGAAGAGTTTGGTGCCAGTTGTAATTTTGATGTGGATGATGTAGTCGGGAAGTTGGAGAAATTGGGAATTGTCCCTGAAGCCCTCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

9.48

Weight (kDa)

4.5

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 176
AciI CCGC 2 cut(s) 19, 108
AcoI YGGCCR 1 cut(s) 134
AjuI GAANNNNNNNTTGG 2 cut(s) 32, 64
AoxI GGCC 1 cut(s) 134
ApeKI GCWGC 2 cut(s) 16, 53
BanI GGYRCC 1 cut(s) 176
BbvI GCAGC 2 cut(s) 28, 40
BisI GCNGC 2 cut(s) 17, 54
BlsI GCNGC 2 cut(s) 18, 55
BmiI GGNNCC 1 cut(s) 178
BpmI CTGGAG 1 cut(s) 53
Bse1I ACTGG 2 cut(s) 105, 180
Bse3DI GCAATG 1 cut(s) 15
BseGI GGATG 1 cut(s) 205
BseMI GCAATG 1 cut(s) 15
BseNI ACTGG 2 cut(s) 105, 180
BseXI GCAGC 2 cut(s) 28, 40
BshFI GGCC 1 cut(s) 136
BshNI GGYRCC 1 cut(s) 176
BsiSI CCGG 1 cut(s) 137
BslFI GGGAC 1 cut(s) 221
BsmFI GGGAC 1 cut(s) 221
BsnI GGCC 1 cut(s) 136
Bsp143I GATC 2 cut(s) 42, 129
BspACI CCGC 2 cut(s) 19, 108
BspANI GGCC 1 cut(s) 136
BspLI GGNNCC 1 cut(s) 178
BspT107I GGYRCC 1 cut(s) 176
BsrDI GCAATG 1 cut(s) 15
BsrI ACTGG 2 cut(s) 105, 180
BssMI GATC 2 cut(s) 42, 129
Bst4CI ACNGT 1 cut(s) 81
Bst6I CTCTTC 1 cut(s) 162
BstF5I GGATG 1 cut(s) 205
BstKTI GATC 2 cut(s) 45, 132
BstMBI GATC 2 cut(s) 42, 129
BstV1I GCAGC 2 cut(s) 28, 40
BsuRI GGCC 1 cut(s) 136
BtsCI GGATG 1 cut(s) 205
CviAII CATG 1 cut(s) 85
CviJI RGCY 3 cut(s) 53, 136, 245
CviKI_1 RGCY 3 cut(s) 53, 136, 245
DpnI GATC 2 cut(s) 44, 131
DpnII GATC 2 cut(s) 42, 129
EaeI YGGCCR 1 cut(s) 134
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
FaeI CATG 1 cut(s) 88
FaiI YATR 3 cut(s) 58, 86, 90
FalI AAGNNNNNCTT 2 cut(s) 32, 64
FaqI GGGAC 1 cut(s) 221
FatI CATG 1 cut(s) 84
Fnu4HI GCNGC 2 cut(s) 17, 54
FokI GGATG 1 cut(s) 212
Fsp4HI GCNGC 2 cut(s) 17, 54
GluI GCNGC 2 cut(s) 17, 54
GsuI CTGGAG 1 cut(s) 53
HaeIII GGCC 1 cut(s) 136
HapII CCGG 1 cut(s) 137
Hin1II CATG 1 cut(s) 88
HpaII CCGG 1 cut(s) 137
Hpy188I TCNGA 2 cut(s) 63, 126
Hpy188III TCNNGA 1 cut(s) 211
HpyAV CCTTC 1 cut(s) 105
HpyCH4III ACNGT 1 cut(s) 81
HpyCH4V TGCA 1 cut(s) 56
Hsp92II CATG 1 cut(s) 88
Kzo9I GATC 2 cut(s) 42, 129
LmnI GCTCC 1 cut(s) 34
LpnPI CCDG 5 cut(s) 17, 86, 118, 150, 193
Lsp1109I GCAGC 2 cut(s) 28, 40
MalI GATC 2 cut(s) 44, 131
MboI GATC 2 cut(s) 42, 129
MboII GAAGA 3 cut(s) 52, 113, 179
MluCI AATT 3 cut(s) 187, 224, 231
MmeI TCCRAC 1 cut(s) 198
MnlI CCTC 1 cut(s) 145
MseI TTAA 2 cut(s) 162, 253
MspA1I CMGCKG 1 cut(s) 19
MspI CCGG 1 cut(s) 137
NdeII GATC 2 cut(s) 42, 129
NlaIII CATG 1 cut(s) 88
NlaIV GGNNCC 1 cut(s) 178
PkrI GCNGC 2 cut(s) 18, 55
PspN4I GGNNCC 1 cut(s) 178
SaqAI TTAA 2 cut(s) 162, 253
SatI GCNGC 2 cut(s) 17, 54
Sau3AI GATC 2 cut(s) 42, 129
SetI ASST 2 cut(s) 69, 146
Sse9I AATT 3 cut(s) 187, 224, 231
SsiI CCGC 2 cut(s) 19, 108
TaaI ACNGT 1 cut(s) 81
TasI AATT 3 cut(s) 187, 224, 231
Tru1I TTAA 2 cut(s) 162, 253
Tru9I TTAA 2 cut(s) 162, 253
TseI GCWGC 2 cut(s) 16, 53
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.