Rh6CG152900

Protein of unknown function (DUF3754)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000718
Physical Location & Seq
Reverse (-)
19887928 .. 19890916
2989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG152900.1

Sequence Viewer

Length: 213 bp
ATGCAACTGTATTCGTTCTTTGACCCCGTACATGCAGGGAATCAAAAATTGCAACAACAGAGTCTTTCTTCTAAAGAAATTGATGTACTGGAACAGAATTTCCTCATGTACTTATTTCAGGTGATGGAAAAGAGTAATTTCAAGATTGCAACTGATGAAGAAATTGAGATTGCGCATTTGGTAGCATTTTCTAAATTTTCCCATTGTGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3754

Protein Analysis

70

Amino Acids

8.13

Weight (kDa)

5.1

Isoelectric Point (pI)

44.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 174
AcsI RAATTY 2 cut(s) 97, 194
AfaI GTAC 3 cut(s) 30, 87, 110
AgsI TTSAA 1 cut(s) 142
AloI GAACNNNNNNTCC 2 cut(s) 84, 116
ApoI RAATTY 2 cut(s) 97, 194
AspLEI GCGC 1 cut(s) 175
AsuHPI GGTGA 1 cut(s) 133
BccI CCATC 1 cut(s) 118
Bse1I ACTGG 1 cut(s) 93
BseNI ACTGG 1 cut(s) 93
BsrI ACTGG 1 cut(s) 93
Bst4CI ACNGT 1 cut(s) 9
BstHHI GCGC 1 cut(s) 175
BstNSI RCATGY 1 cut(s) 35
CfoI GCGC 1 cut(s) 175
Csp6I GTAC 3 cut(s) 29, 86, 109
CviAII CATG 2 cut(s) 32, 106
CviQI GTAC 3 cut(s) 29, 86, 109
FaeI CATG 2 cut(s) 35, 109
FaiI YATR 2 cut(s) 33, 107
FatI CATG 2 cut(s) 31, 105
FspI TGCGCA 1 cut(s) 174
GlaI GCGC 1 cut(s) 174
HhaI GCGC 1 cut(s) 175
Hin1II CATG 2 cut(s) 35, 109
Hin6I GCGC 1 cut(s) 173
HinP1I GCGC 1 cut(s) 173
HinfI GANTC 2 cut(s) 40, 61
HphI GGTGA 1 cut(s) 133
Hpy188III TCNNGA 1 cut(s) 142
HpyCH4III ACNGT 1 cut(s) 9
HpyCH4V TGCA 4 cut(s) 4, 35, 52, 149
Hsp92II CATG 2 cut(s) 35, 109
HspAI GCGC 1 cut(s) 173
LpnPI CCDG 3 cut(s) 21, 74, 104
MboII GAAGA 2 cut(s) 60, 170
MluCI AATT 6 cut(s) 47, 78, 97, 136, 162, 194
MlyI GAGTC 1 cut(s) 70
MnlI CCTC 1 cut(s) 113
NlaIII CATG 2 cut(s) 35, 109
NsbI TGCGCA 1 cut(s) 174
NspI RCATGY 1 cut(s) 35
PfeI GAWTC 1 cut(s) 40
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
RsaI GTAC 3 cut(s) 30, 87, 110
RsaNI GTAC 3 cut(s) 29, 86, 109
SchI GAGTC 1 cut(s) 70
SetI ASST 1 cut(s) 123
SgeI CNNG 7 cut(s) 38, 44, 48, 101, 118, 131, 154
Sse9I AATT 6 cut(s) 47, 78, 97, 136, 162, 194
TaaI ACNGT 1 cut(s) 9
TasI AATT 6 cut(s) 47, 78, 97, 136, 162, 194
TatI WGTACW 2 cut(s) 85, 108
TfiI GAWTC 1 cut(s) 40
TspDTI ATGAA 1 cut(s) 171
XapI RAATTY 2 cut(s) 97, 194
XceI RCATGY 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.