Rh6CG159900

Protein of unknown function (DUF3754)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
20745740 .. 20747062
1323 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG159900.1

Sequence Viewer

Length: 345 bp
ATGCAACTGTATTCGTTCTTTGACCCCGTACATGCAGGGAATCAAAAATTGCAACAACAGAGTCTTTCTTCTAAAGAAATTGATGTACTGGAACAGAATTTCCTCATGTACTTATTTCAGGTGATGGAAAAGAGTAATTTCAAGATTGCAACTGATGAAGAAATTGAGATTGCGCATTTGGTAGCATTTTCTAAATTTTCCCATTGTGAAACCATGTGTGAAGAAATTTGGCAGATTTTGGAGCCGTGTTTGAAAGAGTACGGCATTTCATGCACACTGATGCAGAGCGACACTGGCATAACAGTCTCAATGGCCAGAAGCATTGGGAGATCAGATATTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

114

Amino Acids

13.14

Weight (kDa)

4.67

Isoelectric Point (pI)

52.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 174
AcoI YGGCCR 1 cut(s) 312
AcsI RAATTY 3 cut(s) 97, 194, 225
AfaI GTAC 4 cut(s) 30, 87, 110, 260
AgsI TTSAA 2 cut(s) 142, 253
AloI GAACNNNNNNTCC 2 cut(s) 84, 116
Alw26I GTCTC 1 cut(s) 310
AoxI GGCC 1 cut(s) 312
ApoI RAATTY 3 cut(s) 97, 194, 225
AspLEI GCGC 1 cut(s) 175
AsuHPI GGTGA 1 cut(s) 133
BalI TGGCCA 1 cut(s) 314
BccI CCATC 1 cut(s) 118
BceAI ACGGC 2 cut(s) 229, 277
BcoDI GTCTC 1 cut(s) 310
BmiI GGNNCC 1 cut(s) 243
BmsI GCATC 1 cut(s) 270
Bse1I ACTGG 2 cut(s) 93, 298
BseNI ACTGG 2 cut(s) 93, 298
BshFI GGCC 1 cut(s) 314
BsmAI GTCTC 1 cut(s) 310
BsnI GGCC 1 cut(s) 314
Bsp143I GATC 1 cut(s) 329
BspANI GGCC 1 cut(s) 314
BspLI GGNNCC 1 cut(s) 243
BsrI ACTGG 2 cut(s) 93, 298
BssMI GATC 1 cut(s) 329
Bst4CI ACNGT 2 cut(s) 9, 304
BstAPI GCANNNNNTGC 1 cut(s) 270
BstHHI GCGC 1 cut(s) 175
BstKTI GATC 1 cut(s) 332
BstMAI GTCTC 1 cut(s) 310
BstMBI GATC 1 cut(s) 329
BstMWI GCNNNNNNNGC 2 cut(s) 270, 294
BstNSI RCATGY 1 cut(s) 35
BsuRI GGCC 1 cut(s) 314
BtsIMutI CAGTG 2 cut(s) 275, 291
CfoI GCGC 1 cut(s) 175
Csp6I GTAC 4 cut(s) 29, 86, 109, 259
CviAII CATG 4 cut(s) 32, 106, 214, 270
CviJI RGCY 2 cut(s) 244, 314
CviKI_1 RGCY 2 cut(s) 244, 314
CviQI GTAC 4 cut(s) 29, 86, 109, 259
DpnI GATC 1 cut(s) 331
DpnII GATC 1 cut(s) 329
EaeI YGGCCR 1 cut(s) 312
FaeI CATG 4 cut(s) 35, 109, 217, 273
FaiI YATR 5 cut(s) 33, 107, 215, 271, 299
FatI CATG 4 cut(s) 31, 105, 213, 269
FspI TGCGCA 1 cut(s) 174
GlaI GCGC 1 cut(s) 174
HaeIII GGCC 1 cut(s) 314
HhaI GCGC 1 cut(s) 175
Hin1II CATG 4 cut(s) 35, 109, 217, 273
Hin6I GCGC 1 cut(s) 173
HinP1I GCGC 1 cut(s) 173
HinfI GANTC 2 cut(s) 40, 61
HphI GGTGA 1 cut(s) 133
Hpy188I TCNGA 1 cut(s) 334
Hpy188III TCNNGA 1 cut(s) 142
HpyCH4III ACNGT 2 cut(s) 9, 304
HpyCH4V TGCA 6 cut(s) 4, 35, 52, 149, 273, 283
HpyF10VI GCNNNNNNNGC 2 cut(s) 270, 294
Hsp92II CATG 4 cut(s) 35, 109, 217, 273
HspAI GCGC 1 cut(s) 173
Kzo9I GATC 1 cut(s) 329
LmnI GCTCC 1 cut(s) 241
LpnPI CCDG 5 cut(s) 21, 74, 104, 279, 328
LweI GCATC 1 cut(s) 270
MalI GATC 1 cut(s) 331
MboI GATC 1 cut(s) 329
MboII GAAGA 3 cut(s) 60, 170, 233
MlsI TGGCCA 1 cut(s) 314
MluCI AATT 7 cut(s) 47, 78, 97, 136, 162, 194, 225
MluNI TGGCCA 1 cut(s) 314
MlyI GAGTC 1 cut(s) 70
MnlI CCTC 1 cut(s) 113
Mox20I TGGCCA 1 cut(s) 314
MscI TGGCCA 1 cut(s) 314
MslI CAYNNNNRTG 1 cut(s) 278
Msp20I TGGCCA 1 cut(s) 314
MwoI GCNNNNNNNGC 2 cut(s) 270, 294
NdeII GATC 1 cut(s) 329
NlaIII CATG 4 cut(s) 35, 109, 217, 273
NlaIV GGNNCC 1 cut(s) 243
NsbI TGCGCA 1 cut(s) 174
NspI RCATGY 1 cut(s) 35
PfeI GAWTC 1 cut(s) 40
PleI GAGTC 1 cut(s) 69
PpsI GAGTC 1 cut(s) 69
PspN4I GGNNCC 1 cut(s) 243
RsaI GTAC 4 cut(s) 30, 87, 110, 260
RsaNI GTAC 4 cut(s) 29, 86, 109, 259
RseI CAYNNNNRTG 1 cut(s) 278
Sau3AI GATC 1 cut(s) 329
SchI GAGTC 1 cut(s) 70
SetI ASST 1 cut(s) 123
SfaNI GCATC 1 cut(s) 270
SmiMI CAYNNNNRTG 1 cut(s) 278
Sse9I AATT 7 cut(s) 47, 78, 97, 136, 162, 194, 225
TaaI ACNGT 2 cut(s) 9, 304
TasI AATT 7 cut(s) 47, 78, 97, 136, 162, 194, 225
TatI WGTACW 2 cut(s) 85, 108
TfiI GAWTC 1 cut(s) 40
TscAI CASTG 2 cut(s) 282, 298
TspDTI ATGAA 2 cut(s) 171, 258
TspRI CASTG 2 cut(s) 282, 298
XapI RAATTY 3 cut(s) 97, 194, 225
XceI RCATGY 1 cut(s) 35
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.