Rh2DG699300

Protein of unknown function (DUF3754)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
91435397 .. 91436262
866 bp
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UTR
Exon/CDS
Intron
Rh2DG699300.1

Sequence Viewer

Length: 423 bp
ATGGGCAAGAGCAAGAAGAAAGAGATTATACGATTAGAGCGTGAATCCGTCATTGGAGTTACCAAGGCCAGACTCATCAGCACCTTGGCTGCTGAAATCGAAAACGATACTGAGGATCGGACTGAAGAACAGAGAATTCCTGATCGGGATGAGTTTTTGAAGCTATGCAAGAGGGTTGAGTACACAATTCGGGCTTGGTATCTTCTACAATTTGAGGATTTGATGCAACTCTACTCCCTCTTTGATCCTGTACATGGAGCCCAGAAGTTAGAGCAACAGAAACTTAGTGATAAAGAAATTGATGAGCTTGAACAAAATTTCCTCAAGGACTTATTTCTGGTTCTATGGCTGCTTCACTTTAACTTGTTTTCCTCATGTCACACATACCAACTACACAATACTTGCTGCATGTCACAAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

140

Amino Acids

16.67

Weight (kDa)

5.41

Isoelectric Point (pI)

42.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 123, 239
AcsI RAATTY 2 cut(s) 135, 316
AcuI CTGAAG 1 cut(s) 144
AfaI GTAC 2 cut(s) 182, 252
AfiI CCNNNNNNNGG 1 cut(s) 254
AgsI TTSAA 2 cut(s) 160, 311
AjuI GAANNNNNNNTTGG 2 cut(s) 36, 68
AloI GAACNNNNNNTCC 2 cut(s) 303, 335
AluBI AGCT 2 cut(s) 163, 307
AluI AGCT 2 cut(s) 163, 307
AlwI GGATC 2 cut(s) 123, 239
AoxI GGCC 1 cut(s) 66
ApeKI GCWGC 3 cut(s) 89, 349, 405
ApoI RAATTY 2 cut(s) 135, 316
BanII GRGCYC 1 cut(s) 262
BbvI GCAGC 3 cut(s) 76, 336, 392
BisI GCNGC 3 cut(s) 90, 350, 406
BlsI GCNGC 3 cut(s) 91, 351, 407
BmiI GGNNCC 1 cut(s) 259
BmsI GCATC 1 cut(s) 213
BpuEI CTTGAG 1 cut(s) 308
BsaJI CCNNGG 2 cut(s) 63, 84
Bsc4I CCNNNNNNNGG 1 cut(s) 254
BseDI CCNNGG 2 cut(s) 63, 84
BseGI GGATG 1 cut(s) 154
BseLI CCNNNNNNNGG 1 cut(s) 254
BseMII CTCAG 1 cut(s) 102
BseXI GCAGC 3 cut(s) 76, 336, 392
BshFI GGCC 1 cut(s) 68
BslI CCNNNNNNNGG 1 cut(s) 254
BsnI GGCC 1 cut(s) 68
Bsp1286I GDGCHC 1 cut(s) 262
Bsp1407I TGTACA 1 cut(s) 250
Bsp143I GATC 3 cut(s) 115, 142, 244
BspANI GGCC 1 cut(s) 68
BspCNI CTCAG 1 cut(s) 103
BspLI GGNNCC 1 cut(s) 259
BspPI GGATC 2 cut(s) 123, 239
BsrGI TGTACA 1 cut(s) 250
BssECI CCNNGG 2 cut(s) 63, 84
BssMI GATC 3 cut(s) 115, 142, 244
BssT1I CCWWGG 2 cut(s) 63, 84
BstAUI TGTACA 1 cut(s) 250
BstDEI CTNAG 2 cut(s) 111, 284
BstF5I GGATG 1 cut(s) 154
BstKTI GATC 3 cut(s) 118, 145, 247
BstMBI GATC 3 cut(s) 115, 142, 244
BstNSI RCATGY 1 cut(s) 412
BstV1I GCAGC 3 cut(s) 76, 336, 392
BsuRI GGCC 1 cut(s) 68
BtsCI GGATG 1 cut(s) 154
Csp6I GTAC 2 cut(s) 181, 251
CviAII CATG 3 cut(s) 254, 375, 409
CviJI RGCY 7 cut(s) 68, 89, 163, 194, 260, 307, 349
CviKI_1 RGCY 7 cut(s) 68, 89, 163, 194, 260, 307, 349
CviQI GTAC 2 cut(s) 181, 251
DdeI CTNAG 2 cut(s) 111, 284
DpnI GATC 3 cut(s) 117, 144, 246
DpnII GATC 3 cut(s) 115, 142, 244
Eco130I CCWWGG 2 cut(s) 63, 84
Eco24I GRGCYC 1 cut(s) 262
Eco57I CTGAAG 1 cut(s) 144
EcoRI GAATTC 1 cut(s) 135
EcoT14I CCWWGG 2 cut(s) 63, 84
EcoT38I GRGCYC 1 cut(s) 262
ErhI CCWWGG 2 cut(s) 63, 84
FaeI CATG 3 cut(s) 257, 378, 412
FaiI YATR 7 cut(s) 29, 166, 255, 346, 376, 385, 410
FatI CATG 3 cut(s) 253, 374, 408
Fnu4HI GCNGC 3 cut(s) 90, 350, 406
FokI GGATG 1 cut(s) 161
FriOI GRGCYC 1 cut(s) 262
Fsp4HI GCNGC 3 cut(s) 90, 350, 406
GluI GCNGC 3 cut(s) 90, 350, 406
HaeIII GGCC 1 cut(s) 68
Hin1II CATG 3 cut(s) 257, 378, 412
HinfI GANTC 2 cut(s) 44, 72
Hpy166II GTNNAC 1 cut(s) 183
Hpy188I TCNGA 1 cut(s) 120
Hpy188III TCNNGA 2 cut(s) 140, 146
Hpy8I GTNNAC 1 cut(s) 183
HpyCH4V TGCA 3 cut(s) 168, 226, 408
HpyF3I CTNAG 2 cut(s) 111, 284
Hsp92II CATG 3 cut(s) 257, 378, 412
Kzo9I GATC 3 cut(s) 115, 142, 244
LmnI GCTCC 1 cut(s) 257
LpnPI CCDG 5 cut(s) 82, 153, 261, 275, 323
Lsp1109I GCAGC 3 cut(s) 76, 336, 392
LweI GCATC 1 cut(s) 213
MaeIII GTNAC 3 cut(s) 58, 377, 411
MalI GATC 3 cut(s) 117, 144, 246
MboI GATC 3 cut(s) 115, 142, 244
MboII GAAGA 3 cut(s) 28, 137, 194
MhlI GDGCHC 1 cut(s) 262
MluCI AATT 5 cut(s) 135, 186, 209, 297, 316
MlyI GAGTC 1 cut(s) 66
MnlI CCTC 6 cut(s) 106, 165, 208, 248, 332, 382
MseI TTAA 1 cut(s) 360
NdeII GATC 3 cut(s) 115, 142, 244
NlaIII CATG 3 cut(s) 257, 378, 412
NlaIV GGNNCC 1 cut(s) 259
NmuCI GTSAC 2 cut(s) 377, 411
NspI RCATGY 1 cut(s) 412
PcsI WCGNNNNNNNCGW 1 cut(s) 37
PfeI GAWTC 1 cut(s) 44
PkrI GCNGC 3 cut(s) 91, 351, 407
PleI GAGTC 1 cut(s) 66
PpsI GAGTC 1 cut(s) 66
PspN4I GGNNCC 1 cut(s) 259
RsaI GTAC 2 cut(s) 182, 252
RsaNI GTAC 2 cut(s) 181, 251
SaqAI TTAA 1 cut(s) 360
SatI GCNGC 3 cut(s) 90, 350, 406
Sau3AI GATC 3 cut(s) 115, 142, 244
SchI GAGTC 1 cut(s) 66
SduI GDGCHC 1 cut(s) 262
SetI ASST 4 cut(s) 86, 165, 309, 422
SfaNI GCATC 1 cut(s) 213
SmlI CTYRAG 1 cut(s) 323
SmoI CTYRAG 1 cut(s) 323
Sse9I AATT 5 cut(s) 135, 186, 209, 297, 316
StyI CCWWGG 2 cut(s) 63, 84
TaqI TCGA 1 cut(s) 99
TasI AATT 5 cut(s) 135, 186, 209, 297, 316
TatI WGTACW 2 cut(s) 180, 250
TfiI GAWTC 1 cut(s) 44
Tru1I TTAA 1 cut(s) 360
Tru9I TTAA 1 cut(s) 360
TseFI GTSAC 2 cut(s) 377, 411
TseI GCWGC 3 cut(s) 89, 349, 405
Tsp45I GTSAC 2 cut(s) 377, 411
TspGWI ACGGA 1 cut(s) 37
XapI RAATTY 2 cut(s) 135, 316
XceI RCATGY 1 cut(s) 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.