to Saccharomyces cerevisiae YPT31 (YER031C) and YPT32 (YGL210W)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 50 |
| AciI | CCGC | 1 cut(s) | 246 |
| AcoI | YGGCCR | 2 cut(s) | 136, 176 |
| AcyI | GRCGYC | 1 cut(s) | 51 |
| AfaI | GTAC | 1 cut(s) | 20 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 163, 164 |
| AgsI | TTSAA | 1 cut(s) | 97 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 109 |
| AjnI | CCWGG | 1 cut(s) | 74 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 77, 109 |
| AoxI | GGCC | 3 cut(s) | 136, 154, 176 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 92 |
| AspS9I | GGNCC | 1 cut(s) | 155 |
| AsuHPI | GGTGA | 1 cut(s) | 73 |
| BaeGI | GKGCMC | 1 cut(s) | 211 |
| BalI | TGGCCA | 2 cut(s) | 138, 178 |
| BciT130I | CCWGG | 1 cut(s) | 76 |
| Bme1390I | CCNGG | 1 cut(s) | 76 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 109 |
| BmgT120I | GGNCC | 1 cut(s) | 155 |
| BmrFI | CCNGG | 1 cut(s) | 76 |
| BmsI | GCATC | 1 cut(s) | 207 |
| BpmI | CTGGAG | 1 cut(s) | 58 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BsaHI | GRCGYC | 1 cut(s) | 51 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 89, 119 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 163, 164 |
| Bse3DI | GCAATG | 1 cut(s) | 117 |
| BseBI | CCWGG | 1 cut(s) | 76 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 163, 164 |
| BseMI | GCAATG | 1 cut(s) | 117 |
| BseSI | GKGCMC | 1 cut(s) | 211 |
| BshFI | GGCC | 3 cut(s) | 138, 156, 178 |
| BsiSI | CCGG | 1 cut(s) | 48 |
| BslFI | GGGAC | 1 cut(s) | 180 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 163, 164 |
| BsmFI | GGGAC | 1 cut(s) | 180 |
| BsnI | GGCC | 3 cut(s) | 138, 156, 178 |
| Bsp1286I | GDGCHC | 1 cut(s) | 211 |
| Bsp1407I | TGTACA | 1 cut(s) | 18 |
| Bsp143I | GATC | 1 cut(s) | 7 |
| BspACI | CCGC | 1 cut(s) | 246 |
| BspANI | GGCC | 3 cut(s) | 138, 156, 178 |
| BsrDI | GCAATG | 1 cut(s) | 117 |
| BsrGI | TGTACA | 1 cut(s) | 18 |
| BssMI | GATC | 1 cut(s) | 7 |
| BssNI | GRCGYC | 1 cut(s) | 51 |
| Bst2UI | CCWGG | 1 cut(s) | 76 |
| Bst4CI | ACNGT | 1 cut(s) | 101 |
| BstACI | GRCGYC | 1 cut(s) | 51 |
| BstAUI | TGTACA | 1 cut(s) | 18 |
| BstC8I | GCNNGC | 2 cut(s) | 136, 176 |
| BstDEI | CTNAG | 1 cut(s) | 24 |
| BstKTI | GATC | 1 cut(s) | 10 |
| BstMBI | GATC | 1 cut(s) | 7 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 48 |
| BstNI | CCWGG | 1 cut(s) | 76 |
| BstSCI | CCNGG | 1 cut(s) | 74 |
| BstSLI | GKGCMC | 1 cut(s) | 211 |
| BsuRI | GGCC | 3 cut(s) | 138, 156, 178 |
| BtsI | GCAGTG | 1 cut(s) | 169 |
| BtsIMutI | CAGTG | 1 cut(s) | 169 |
| Cac8I | GCNNGC | 2 cut(s) | 136, 176 |
| Cfr13I | GGNCC | 1 cut(s) | 155 |
| CseI | GACGC | 1 cut(s) | 40 |
| Csp6I | GTAC | 1 cut(s) | 19 |
| CviAII | CATG | 1 cut(s) | 222 |
| CviJI | RGCY | 3 cut(s) | 138, 156, 178 |
| CviKI_1 | RGCY | 3 cut(s) | 138, 156, 178 |
| CviQI | GTAC | 1 cut(s) | 19 |
| DdeI | CTNAG | 1 cut(s) | 24 |
| DpnI | GATC | 1 cut(s) | 9 |
| DpnII | GATC | 1 cut(s) | 7 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 50 |
| DriI | GACNNNNNGTC | 1 cut(s) | 109 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 50 |
| EaeI | YGGCCR | 2 cut(s) | 136, 176 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 109 |
| EcoRII | CCWGG | 1 cut(s) | 74 |
| FaeI | CATG | 1 cut(s) | 225 |
| FaiI | YATR | 3 cut(s) | 192, 223, 234 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 17, 49 |
| FaqI | GGGAC | 1 cut(s) | 180 |
| FatI | CATG | 1 cut(s) | 221 |
| GsuI | CTGGAG | 1 cut(s) | 58 |
| HaeIII | GGCC | 3 cut(s) | 138, 156, 178 |
| HapII | CCGG | 1 cut(s) | 48 |
| HgaI | GACGC | 1 cut(s) | 40 |
| Hin1I | GRCGYC | 1 cut(s) | 51 |
| Hin1II | CATG | 1 cut(s) | 225 |
| HinfI | GANTC | 2 cut(s) | 44, 104 |
| HpaII | CCGG | 1 cut(s) | 48 |
| HphI | GGTGA | 1 cut(s) | 73 |
| Hpy166II | GTNNAC | 3 cut(s) | 21, 81, 114 |
| Hpy188III | TCNNGA | 1 cut(s) | 34 |
| Hpy8I | GTNNAC | 3 cut(s) | 21, 81, 114 |
| Hpy99I | CGWCG | 1 cut(s) | 56 |
| HpyAV | CCTTC | 1 cut(s) | 239 |
| HpyCH4III | ACNGT | 1 cut(s) | 101 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 48 |
| HpyF3I | CTNAG | 1 cut(s) | 24 |
| Hsp92I | GRCGYC | 1 cut(s) | 51 |
| Hsp92II | CATG | 1 cut(s) | 225 |
| Kzo9I | GATC | 1 cut(s) | 7 |
| LpnPI | CCDG | 6 cut(s) | 61, 61, 88, 120, 160, 171 |
| LweI | GCATC | 1 cut(s) | 207 |
| MaeIII | GTNAC | 1 cut(s) | 101 |
| MalI | GATC | 1 cut(s) | 9 |
| MboI | GATC | 1 cut(s) | 7 |
| MhlI | GDGCHC | 1 cut(s) | 211 |
| MlsI | TGGCCA | 2 cut(s) | 138, 178 |
| MluNI | TGGCCA | 2 cut(s) | 138, 178 |
| MlyI | GAGTC | 2 cut(s) | 38, 98 |
| Mox20I | TGGCCA | 2 cut(s) | 138, 178 |
| MroXI | GAANNNNTTC | 1 cut(s) | 92 |
| MscI | TGGCCA | 2 cut(s) | 138, 178 |
| Msp20I | TGGCCA | 2 cut(s) | 138, 178 |
| MspI | CCGG | 1 cut(s) | 48 |
| MspR9I | CCNGG | 1 cut(s) | 76 |
| MvaI | CCWGG | 1 cut(s) | 76 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 48 |
| NdeII | GATC | 1 cut(s) | 7 |
| NlaIII | CATG | 1 cut(s) | 225 |
| NmuCI | GTSAC | 1 cut(s) | 101 |
| PdmI | GAANNNNTTC | 1 cut(s) | 92 |
| PleI | GAGTC | 2 cut(s) | 38, 98 |
| PpsI | GAGTC | 2 cut(s) | 38, 98 |
| Psp6I | CCWGG | 1 cut(s) | 74 |
| PspGI | CCWGG | 1 cut(s) | 74 |
| PspPI | GGNCC | 1 cut(s) | 155 |
| RsaI | GTAC | 1 cut(s) | 20 |
| RsaNI | GTAC | 1 cut(s) | 19 |
| Sau3AI | GATC | 1 cut(s) | 7 |
| Sau96I | GGNCC | 1 cut(s) | 155 |
| SchI | GAGTC | 2 cut(s) | 38, 98 |
| ScrFI | CCNGG | 1 cut(s) | 76 |
| SduI | GDGCHC | 1 cut(s) | 211 |
| SetI | ASST | 1 cut(s) | 80 |
| SfaNI | GCATC | 1 cut(s) | 207 |
| SmlI | CTYRAG | 1 cut(s) | 212 |
| SmoI | CTYRAG | 1 cut(s) | 212 |
| SsiI | CCGC | 1 cut(s) | 246 |
| StyD4I | CCNGG | 1 cut(s) | 74 |
| TaaI | ACNGT | 1 cut(s) | 101 |
| TaqI | TCGA | 1 cut(s) | 126 |
| TaqII | GACCGA | 1 cut(s) | 134 |
| TatI | WGTACW | 1 cut(s) | 18 |
| TscAI | CASTG | 1 cut(s) | 176 |
| TseFI | GTSAC | 1 cut(s) | 101 |
| Tsp45I | GTSAC | 1 cut(s) | 101 |
| TspDTI | ATGAA | 1 cut(s) | 221 |
| TspRI | CASTG | 1 cut(s) | 176 |
| XmnI | GAANNNNTTC | 1 cut(s) | 92 |