AT2G01310

Belongs to the cyclin family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
152298 .. 152827
530 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G01310.1

Sequence Viewer

Length: 162 bp
ATGATGGAGCAAGAGATATGGGTGAGGGTTACAAGAGCGGCAGCAAAACGCAAAGCTTCGACGGCGATGGGTATTGATGAAGATCGGCTCAACAAGAAGAGAGTTTTCCTTGGTGAGCTTCTAAACGTCTCCAATGTCAATCTCTTATCTAATCTCAATTAG

Protein Analysis

53

Amino Acids

6.04

Weight (kDa)

9.98

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000541)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47210 AT1G47210 AT1G47220 AT1G47230 AT1G47230 AT2G01310 AT5G43080 AT5G43080
fragaria_vesca FvH4_2g04770 FvH4_2g04770 FvH4_2g04770 FvH4_2g33510 FvH4_2g33510 FvH4_2g33510 FvH4_2g33511 FvH4_2g33511 FvH4_2g33511 FvH4_2g33511 FvH4_2g33530 FvH4_2g33530
malus_domestica MD05G1092000.v1.1 MD08G1091000.v1.1 MD08G1091200.v1.1 MD10G1100200.v1.1 MD10G1100700.v1.1 MD12G1105600.v1.1 MD15G1075100.v1.1 MD15G1075200.v1.1
prunus_persica Prupe.1G428000_v2.0.a1 Prupe.1G428100_v2.0.a1 Prupe.4G285800_v2.0.a1 Prupe.8G137700_v2.0.a1 Prupe.8G137700_v2.0.a1
pyrus_communis pycom05g09170 pycom08g07360 pycom08g07370 pycom15g07000 pycom15g07020
rosa_chinensis RchiOBHm_Chr3g0465621 RchiOBHm_Chr6g0254421 RchiOBHm_Chr6g0254451 RchiOBHm_Chr6g0308961 RchiOBHm_Chr6g0308971 RchiOBHm_Chr6g0308991 RchiOBHm_Chr7g0190851
rosa_laevigata RLG00000003915 RLG00000010598 RLG00000010599 RLG00000010600 RLG00000014913
rosa_multiflora Rmu_sc0009578.1_g000002 Rmu_sc0009578.1_g000003 Rmu_sc0029942.1_g000001 Rmu_sc0036151.1_g000001 Rmu_sc0036151.1_g000002 Rmu_sc0037719.1_g000001 Rmu_sc0042877.1_g000001 Rmu_ssc0000481.1_g000003
rosa_roxburghii Rroxscaffold_7G00159740 Rroxscaffold_7G00159750 Rroxscaffold_7G00159760 Rroxscaffold_7G00159770 Rroxscaffold_7G00210810
rosa_rugosa Rorug05G0552200 Rorug05G0552300 Rorug05G0552400
rosa_samantha Rh3CG081000 Rh6AG069300 Rh6AG481300 Rh6AG481600 Rh6BG062000 Rh6BG490400 Rh6BG490500 Rh6BG490600 Rh6CG062100 Rh6CG495700 Rh6CG495900 Rh6DG059100 Rh6DG481600 Rh6DG481700 Rh6DG481800
rosa_wichuraiana Rw6G006090 Rw6G041930 Rw6G041940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 38
AciI CCGC 1 cut(s) 38
AluBI AGCT 2 cut(s) 56, 118
AluI AGCT 2 cut(s) 56, 118
Alw26I GTCTC 1 cut(s) 133
ApeKI GCWGC 1 cut(s) 41
AsuHPI GGTGA 2 cut(s) 34, 125
BbvI GCAGC 1 cut(s) 53
BccI CCATC 1 cut(s) 61
BceAI ACGGC 1 cut(s) 78
BcoDI GTCTC 1 cut(s) 133
BisI GCNGC 2 cut(s) 39, 42
BlsI GCNGC 2 cut(s) 40, 43
BsaBI GATNNNNATC 1 cut(s) 81
BsaJI CCNNGG 1 cut(s) 109
Bse8I GATNNNNATC 1 cut(s) 81
BseDI CCNNGG 1 cut(s) 109
BseJI GATNNNNATC 1 cut(s) 81
BseXI GCAGC 1 cut(s) 53
BsmAI GTCTC 1 cut(s) 133
BsmBI CGTCTC 1 cut(s) 133
Bsp143I GATC 1 cut(s) 82
BspACI CCGC 1 cut(s) 38
BsrBI CCGCTC 1 cut(s) 38
BssECI CCNNGG 1 cut(s) 109
BssMI GATC 1 cut(s) 82
BssT1I CCWWGG 1 cut(s) 109
Bst6I CTCTTC 1 cut(s) 92
BstKTI GATC 1 cut(s) 85
BstMAI GTCTC 1 cut(s) 133
BstMBI GATC 1 cut(s) 82
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstV1I GCAGC 1 cut(s) 53
BtgZI GCGATG 1 cut(s) 80
CviJI RGCY 3 cut(s) 56, 88, 118
CviKI_1 RGCY 3 cut(s) 56, 88, 118
DpnI GATC 1 cut(s) 84
DpnII GATC 1 cut(s) 82
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
Eco130I CCWWGG 1 cut(s) 109
EcoT14I CCWWGG 1 cut(s) 109
ErhI CCWWGG 1 cut(s) 109
Esp3I CGTCTC 1 cut(s) 133
FaiI YATR 1 cut(s) 19
Fnu4HI GCNGC 2 cut(s) 39, 42
Fsp4HI GCNGC 2 cut(s) 39, 42
GluI GCNGC 2 cut(s) 39, 42
HindIII AAGCTT 1 cut(s) 54
HphI GGTGA 2 cut(s) 34, 125
Hpy99I CGWCG 1 cut(s) 64
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpySE526I ACGT 1 cut(s) 126
Kzo9I GATC 1 cut(s) 82
LmnI GCTCC 1 cut(s) 7
Lsp1109I GCAGC 1 cut(s) 53
MaeII ACGT 1 cut(s) 126
MaeIII GTNAC 1 cut(s) 28
MalI GATC 1 cut(s) 84
MbiI CCGCTC 1 cut(s) 38
MboI GATC 1 cut(s) 82
MboII GAAGA 2 cut(s) 92, 109
MluCI AATT 1 cut(s) 157
MnlI CCTC 1 cut(s) 18
MwoI GCNNNNNNNGC 1 cut(s) 62
NdeII GATC 1 cut(s) 82
PkrI GCNGC 2 cut(s) 40, 43
SatI GCNGC 2 cut(s) 39, 42
Sau3AI GATC 1 cut(s) 82
SetI ASST 3 cut(s) 58, 120, 129
SgeI CNNG 4 cut(s) 23, 45, 106, 122
Sse9I AATT 1 cut(s) 157
SsiI CCGC 1 cut(s) 38
StyI CCWWGG 1 cut(s) 109
TaiI ACGT 1 cut(s) 129
TaqI TCGA 1 cut(s) 59
TasI AATT 1 cut(s) 157
TauI GCSGC 1 cut(s) 41
TseI GCWGC 1 cut(s) 41
TspDTI ATGAA 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.