Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000541

Physical Location & Seq

Genomic Coordinates Forward (+)

2880859 .. 2882695

Gene Structure 1837 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000010600

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGCGGAGAAAGAGAACTGCGTCCGCGTCACGCGCGCCATGAAAAGGAAGGCCGAAGCCGCCGTAGACCAAACGCCCCCCAAGAAGCGTGTCGTACTGGGCGAGCTCCCCAACCTCCAAAACGCCGTCGTTCCGGCCAATGAGGGTTCTCGGGTTGAGCCCCACAAGCGGAAATCCAGAACTAAATCCCGGGCGGCGAAGAAAGCGCTGCCTATCCCGGAAACCTCGCCGGAGGTTGAAACGACGGCGTCGGATCCCCAAATGTGCGAGCCTTATTCACGTGACATATACGAGTATCTTCACAAGCTCGAGGTGGATCCAAATAGAAGACCTTTGCCTGATTACTTGGCAAAGGTTCAGAAGGATATCACTGCTAATATGAGAGGAGTCTTGGTGGACTGGTTGGTGGAAGTTGCTGAGGAATACAAGCTCCTTTCCGATACTCTCTACCTCACCGTTTCGTACGTTGATAGGTTCCTTTCTTTCAATGCTCTTAATCGGAAAATGCTTCAGTTACTCGGTGTTTCTTCAATGCTGGTTGCCTCGAAGTATGAAGAGATCACACCTCCACATGTGGAAGAATTGTGTTACATAACTGATAACACATACACCAAGGAAGAGGTATGCAAAATGGAGGCTGATATACTCAAGGCCTTGAAGTTTGAATTGGGGAATCCTACCATAAAGACAATCTTAAGGAGATTCAATAGAGTTGCTGAAGAGGGCAACAAAGATCCTGATCTGCATTTTGAATTTCTGGGCTACTACCTTGCAGAACTAAGTTTGTTAGACTACAACTGTGTCAAATTTTTGCCTTCTTTGGTGGCTGCGTCTGTTGTATTTCTTACAAGATTTATCATCCAGCCAAGGATGCATCCATGGACTTTGTCGCTGCAACAATATTCAGGATACAAACCATCTGAGTTGAGGGAATGTGTCCTTATCATACATGACTTGTATCTGGGTAGAAGAGGAGGGTCATTGCAAGCTATAAGAGAGAAGTATAAAAGACACAAGTTCAAATTCGTGGCAGTGATGCCTTCTCCTCCAGAGGTACCAGCATACTATTTTGAAGATCTTATAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko04110 ko04152 ko04218 ko04914 ko05161 ko05165 ko05169 ko05203 map04110 map04152 map04218 map04914 map05161 map05165 map05169 map05203

Pfam Domains

Protein Families

Cyclin_C Cyclin_N

Protein Analysis

363

Amino Acids

41.7

Weight (kDa)

8.34

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cyclin_N	PF00134	95 - 223	5.7e-46	Cyclin, N-terminal domain
Cyclin_C	PF02984	226 - 348	4.1e-32	Cyclin, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000541)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47210 AT1G47210 AT1G47220 AT1G47230 AT1G47230 AT2G01310 AT5G43080 AT5G43080
fragaria_vesca	FvH4_2g04770 FvH4_2g04770 FvH4_2g04770 FvH4_2g33510 FvH4_2g33510 FvH4_2g33510 FvH4_2g33511 FvH4_2g33511 FvH4_2g33511 FvH4_2g33511 FvH4_2g33530 FvH4_2g33530
malus_domestica	MD05G1092000.v1.1 MD08G1091000.v1.1 MD08G1091200.v1.1 MD10G1100200.v1.1 MD10G1100700.v1.1 MD12G1105600.v1.1 MD15G1075100.v1.1 MD15G1075200.v1.1
prunus_persica	Prupe.1G428000_v2.0.a1 Prupe.1G428100_v2.0.a1 Prupe.4G285800_v2.0.a1 Prupe.8G137700_v2.0.a1 Prupe.8G137700_v2.0.a1
pyrus_communis	pycom05g09170 pycom08g07360 pycom08g07370 pycom15g07000 pycom15g07020
rosa_chinensis	RchiOBHm_Chr3g0465621 RchiOBHm_Chr6g0254421 RchiOBHm_Chr6g0254451 RchiOBHm_Chr6g0308961 RchiOBHm_Chr6g0308971 RchiOBHm_Chr6g0308991 RchiOBHm_Chr7g0190851
rosa_laevigata	RLG00000003915 RLG00000010598 RLG00000010599 RLG00000010600 RLG00000014913
rosa_multiflora	Rmu_sc0009578.1_g000002 Rmu_sc0009578.1_g000003 Rmu_sc0029942.1_g000001 Rmu_sc0036151.1_g000001 Rmu_sc0036151.1_g000002 Rmu_sc0037719.1_g000001 Rmu_sc0042877.1_g000001 Rmu_ssc0000481.1_g000003
rosa_roxburghii	Rroxscaffold_7G00159740 Rroxscaffold_7G00159750 Rroxscaffold_7G00159760 Rroxscaffold_7G00159770 Rroxscaffold_7G00210810
rosa_rugosa	Rorug05G0552200 Rorug05G0552300 Rorug05G0552400
rosa_samantha	Rh3CG081000 Rh6AG069300 Rh6AG481300 Rh6AG481600 Rh6BG062000 Rh6BG490400 Rh6BG490500 Rh6BG490600 Rh6CG062100 Rh6CG495700 Rh6CG495900 Rh6DG059100 Rh6DG481600 Rh6DG481700 Rh6DG481800
rosa_wichuraiana	Rw6G006090 Rw6G041930 Rw6G041940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1054
AccB1I	GGYRCC	1 cut(s)	1054
AccI	GTMKAC	1 cut(s)	66
AccII	CGCG	3 cut(s)	27, 34, 36
AciI	CCGC	5 cut(s)	5, 25, 60, 169, 194
AclWI	GGATC	5 cut(s)	248, 261, 311, 324, 728
AcoI	YGGCCR	1 cut(s)	135
AcsI	RAATTY	3 cut(s)	752, 806, 1022
AcuI	CTGAAG	2 cut(s)	494, 738
AcvI	CACGTG	1 cut(s)	281
AcyI	GRCGYC	1 cut(s)	248
AfaI	GTAC	3 cut(s)	96, 464, 1056
AfeI	AGCGCT	1 cut(s)	207
AfiI	CCNNNNNNNGG	2 cut(s)	45, 168
AflII	CTTAAG	1 cut(s)	694
AflIII	ACRYGT	1 cut(s)	571
AgsI	TTSAA	9 cut(s)	239, 487, 531, 658, 665, 706, 752, 1021, 1073
AjuI	GAANNNNNNNTTGG	2 cut(s)	650, 682
AluBI	AGCT	4 cut(s)	106, 307, 430, 989
AluI	AGCT	4 cut(s)	106, 307, 430, 989
Alw21I	GWGCWC	1 cut(s)	108
AlwI	GGATC	5 cut(s)	248, 261, 311, 324, 728
Ama87I	CYCGRG	3 cut(s)	150, 189, 308
Aor51HI	AGCGCT	1 cut(s)	207
AoxI	GGCC	3 cut(s)	51, 135, 651
ApeKI	GCWGC	3 cut(s)	208, 827, 892
ApoI	RAATTY	3 cut(s)	752, 806, 1022
Asp718I	GGTACC	1 cut(s)	1054
AspLEI	GCGC	3 cut(s)	36, 38, 208
AsuC2I	CCSGG	3 cut(s)	190, 191, 218
AsuHPI	GGTGA	1 cut(s)	445
AvaI	CYCGRG	3 cut(s)	150, 189, 308
BamHI	GGATCC	2 cut(s)	253, 316
BanI	GGYRCC	1 cut(s)	1054
BanII	GRGCYC	2 cut(s)	108, 162
BbrPI	CACGTG	1 cut(s)	281
BbsI	GAAGAC	1 cut(s)	334
Bbv12I	GWGCWC	1 cut(s)	108
BbvCI	CCTCAGC	1 cut(s)	417
BbvI	GCAGC	3 cut(s)	195, 814, 879
BccI	CCATC	1 cut(s)	925
BceAI	ACGGC	3 cut(s)	47, 110, 261
BciVI	GTATCC	1 cut(s)	902
BcnI	CCSGG	3 cut(s)	190, 191, 218
BfoI	RGCGCY	1 cut(s)	209
BfrI	CTTAAG	1 cut(s)	694
BfuI	GTATCC	1 cut(s)	902
BglII	AGATCT	1 cut(s)	1075
BisI	GCNGC	5 cut(s)	60, 195, 209, 828, 893
BlsI	GCNGC	5 cut(s)	61, 196, 210, 829, 894
Bme1390I	CCNGG	3 cut(s)	190, 191, 218
BmeT110I	CYCGRG	3 cut(s)	150, 189, 308
BmiI	GGNNCC	4 cut(s)	255, 318, 476, 1056
BmrFI	CCNGG	3 cut(s)	190, 191, 218
BmrI	ACTGGG	1 cut(s)	107
BmsI	GCATC	3 cut(s)	861, 883, 1026
BmuI	ACTGGG	1 cut(s)	107
BpiI	GAAGAC	1 cut(s)	334
BpmI	CTGGAG	1 cut(s)	1032
Bpu10I	CCTNAGC	1 cut(s)	417
BpuEI	CTTGAG	1 cut(s)	632
BpuMI	CCSGG	3 cut(s)	190, 191, 218
BsaAI	YACGTR	1 cut(s)	281
BsaBI	GATNNNNATC	1 cut(s)	738
BsaHI	GRCGYC	1 cut(s)	248
BsaJI	CCNNGG	4 cut(s)	189, 612, 866, 878
BsaXI	ACNNNNNCTCC	2 cut(s)	378, 408
Bsc4I	CCNNNNNNNGG	2 cut(s)	45, 168
Bse1I	ACTGG	2 cut(s)	102, 404
Bse3DI	GCAATG	1 cut(s)	980
Bse8I	GATNNNNATC	1 cut(s)	738
BseDI	CCNNGG	4 cut(s)	189, 612, 866, 878
BseGI	GGATG	3 cut(s)	858, 874, 876
BseJI	GATNNNNATC	1 cut(s)	738
BseLI	CCNNNNNNNGG	2 cut(s)	45, 168
BseMI	GCAATG	1 cut(s)	980
BseMII	CTCAG	2 cut(s)	408, 912
BseNI	ACTGG	2 cut(s)	102, 404
BsePI	GCGCGC	1 cut(s)	34
BseRI	GAGGAG	3 cut(s)	399, 987, 1035
BseXI	GCAGC	3 cut(s)	195, 814, 879
Bsh1236I	CGCG	3 cut(s)	27, 34, 36
BshFI	GGCC	3 cut(s)	53, 137, 653
BshNI	GGYRCC	1 cut(s)	1054
BsiHKAI	GWGCWC	1 cut(s)	108
BsiHKCI	CYCGRG	3 cut(s)	150, 189, 308
BsiSI	CCGG	4 cut(s)	134, 190, 218, 230
BsiWI	CGTACG	1 cut(s)	462
BslI	CCNNNNNNNGG	2 cut(s)	45, 168
BsnI	GGCC	3 cut(s)	53, 137, 653
BsoBI	CYCGRG	3 cut(s)	150, 189, 308
Bsp1286I	GDGCHC	2 cut(s)	108, 162
Bsp143I	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
Bsp19I	CCATGG	1 cut(s)	878
BspACI	CCGC	5 cut(s)	5, 25, 60, 169, 194
BspANI	GGCC	3 cut(s)	53, 137, 653
BspCNI	CTCAG	2 cut(s)	409, 913
BspFNI	CGCG	3 cut(s)	27, 34, 36
BspLI	GGNNCC	4 cut(s)	255, 318, 476, 1056
BspPI	GGATC	5 cut(s)	248, 261, 311, 324, 728
BspT107I	GGYRCC	1 cut(s)	1054
BspTI	CTTAAG	1 cut(s)	694
BsrDI	GCAATG	1 cut(s)	980
BsrI	ACTGG	2 cut(s)	102, 404
BssECI	CCNNGG	4 cut(s)	189, 612, 866, 878
BssHII	GCGCGC	1 cut(s)	34
BssMI	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
BssNI	GRCGYC	1 cut(s)	248
BssT1I	CCWWGG	3 cut(s)	612, 866, 878
Bst4CI	ACNGT	2 cut(s)	457, 800
Bst6I	CTCTTC	4 cut(s)	549, 612, 714, 964
BstACI	GRCGYC	1 cut(s)	248
BstAFI	CTTAAG	1 cut(s)	694
BstBAI	YACGTR	1 cut(s)	281
BstC8I	GCNNGC	4 cut(s)	36, 104, 269, 987
BstDEI	CTNAG	3 cut(s)	417, 779, 921
BstDSI	CCRYGG	1 cut(s)	878
BstF5I	GGATG	3 cut(s)	858, 874, 876
BstFNI	CGCG	3 cut(s)	27, 34, 36
BstH2I	RGCGCY	1 cut(s)	209
BstHHI	GCGC	3 cut(s)	36, 38, 208
BstKTI	GATC	6 cut(s)	256, 319, 561, 736, 742, 1078
BstMBI	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
BstMWI	GCNNNNNNNGC	5 cut(s)	33, 59, 166, 203, 871
BstNSI	RCATGY	1 cut(s)	575
BstSCI	CCNGG	3 cut(s)	188, 189, 216
BstUI	CGCG	3 cut(s)	27, 34, 36
BstV1I	GCAGC	3 cut(s)	195, 814, 879
BstV2I	GAAGAC	1 cut(s)	334
BstX2I	RGATCY	4 cut(s)	253, 316, 733, 1075
BstYI	RGATCY	4 cut(s)	253, 316, 733, 1075
BsuI	GTATCC	1 cut(s)	902
BsuRI	GGCC	3 cut(s)	53, 137, 653
BtgI	CCRYGG	1 cut(s)	878
BtsCI	GGATG	3 cut(s)	858, 874, 876
BtsI	GCAGTG	2 cut(s)	369, 1038
BtsIMutI	CAGTG	2 cut(s)	369, 1038
Cac8I	GCNNGC	4 cut(s)	36, 104, 269, 987
CfoI	GCGC	3 cut(s)	36, 38, 208
Cfr9I	CCCGGG	1 cut(s)	189
CseI	GACGC	4 cut(s)	10, 16, 237, 819
Csp6I	GTAC	3 cut(s)	95, 463, 1055
CviAII	CATG	4 cut(s)	40, 572, 879, 950
CviQI	GTAC	3 cut(s)	95, 463, 1055
DdeI	CTNAG	3 cut(s)	417, 779, 921
DpnI	GATC	6 cut(s)	255, 318, 560, 735, 741, 1077
DpnII	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
EaeI	YGGCCR	1 cut(s)	135
Eam1104I	CTCTTC	4 cut(s)	549, 612, 714, 964
EarI	CTCTTC	4 cut(s)	549, 612, 714, 964
EciI	GGCGGA	1 cut(s)	20
Ecl136II	GAGCTC	1 cut(s)	106
Eco130I	CCWWGG	3 cut(s)	612, 866, 878
Eco147I	AGGCCT	1 cut(s)	653
Eco24I	GRGCYC	2 cut(s)	108, 162
Eco32I	GATATC	1 cut(s)	367
Eco47III	AGCGCT	1 cut(s)	207
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	2 cut(s)	494, 738
Eco72I	CACGTG	1 cut(s)	281
Eco88I	CYCGRG	3 cut(s)	150, 189, 308
EcoICRI	GAGCTC	1 cut(s)	106
EcoRV	GATATC	1 cut(s)	367
EcoT14I	CCWWGG	3 cut(s)	612, 866, 878
EcoT22I	ATGCAT	1 cut(s)	876
EcoT38I	GRGCYC	2 cut(s)	108, 162
ErhI	CCWWGG	3 cut(s)	612, 866, 878
FaeI	CATG	4 cut(s)	43, 575, 882, 953
FalI	AAGNNNNNCTT	2 cut(s)	677, 709
FatI	CATG	4 cut(s)	39, 571, 878, 949
FblI	GTMKAC	1 cut(s)	66
Fnu4HI	GCNGC	5 cut(s)	60, 195, 209, 828, 893
FokI	GGATG	3 cut(s)	845, 861, 883
FriOI	GRGCYC	2 cut(s)	108, 162
Fsp4HI	GCNGC	5 cut(s)	60, 195, 209, 828, 893
GlaI	GCGC	3 cut(s)	35, 37, 207
GluI	GCNGC	5 cut(s)	60, 195, 209, 828, 893
GsuI	CTGGAG	1 cut(s)	1032
HaeII	RGCGCY	1 cut(s)	209
HaeIII	GGCC	3 cut(s)	53, 137, 653
HapII	CCGG	4 cut(s)	134, 190, 218, 230
HgaI	GACGC	4 cut(s)	10, 16, 237, 819
HhaI	GCGC	3 cut(s)	36, 38, 208
Hin1I	GRCGYC	1 cut(s)	248
Hin1II	CATG	4 cut(s)	43, 575, 882, 953
Hin6I	GCGC	3 cut(s)	34, 36, 206
HinP1I	GCGC	3 cut(s)	34, 36, 206
HinfI	GANTC	3 cut(s)	387, 673, 702
HpaII	CCGG	4 cut(s)	134, 190, 218, 230
HphI	GGTGA	1 cut(s)	445
Hpy166II	GTNNAC	2 cut(s)	67, 397
Hpy188I	TCNGA	5 cut(s)	253, 360, 439, 501, 922
Hpy188III	TCNNGA	4 cut(s)	177, 737, 906, 1049
Hpy8I	GTNNAC	2 cut(s)	67, 397
Hpy99I	CGWCG	3 cut(s)	131, 247, 253
HpyAV	CCTTC	4 cut(s)	43, 355, 825, 1050
HpyCH4III	ACNGT	2 cut(s)	457, 800
HpyCH4IV	ACGT	2 cut(s)	280, 465
HpyCH4V	TGCA	6 cut(s)	627, 745, 773, 874, 895, 985
HpyF10VI	GCNNNNNNNGC	5 cut(s)	33, 59, 166, 203, 871
HpyF3I	CTNAG	3 cut(s)	417, 779, 921
HpySE526I	ACGT	2 cut(s)	280, 465
Hsp92I	GRCGYC	1 cut(s)	248
Hsp92II	CATG	4 cut(s)	43, 575, 882, 953
HspAI	GCGC	3 cut(s)	34, 36, 206
KpnI	GGTACC	1 cut(s)	1058
Kzo9I	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
LmnI	GCTCC	2 cut(s)	111, 435
Lsp1109I	GCAGC	3 cut(s)	195, 814, 879
LweI	GCATC	3 cut(s)	861, 883, 1026
MaeII	ACGT	2 cut(s)	280, 465
MaeIII	GTNAC	4 cut(s)	28, 281, 513, 587
MalI	GATC	6 cut(s)	255, 318, 560, 735, 741, 1077
MboI	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
MflI	RGATCY	4 cut(s)	253, 316, 733, 1075
MhlI	GDGCHC	2 cut(s)	108, 162
MluCI	AATT	5 cut(s)	581, 665, 752, 806, 1022
MlyI	GAGTC	1 cut(s)	396
MmeI	TCCRAC	1 cut(s)	231
Mph1103I	ATGCAT	1 cut(s)	876
MseI	TTAA	2 cut(s)	495, 695
MspCI	CTTAAG	1 cut(s)	694
MspI	CCGG	4 cut(s)	134, 190, 218, 230
MspR9I	CCNGG	3 cut(s)	190, 191, 218
MvnI	CGCG	3 cut(s)	27, 34, 36
MwoI	GCNNNNNNNGC	5 cut(s)	33, 59, 166, 203, 871
NciI	CCSGG	3 cut(s)	190, 191, 218
NcoI	CCATGG	1 cut(s)	878
NdeII	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
NlaIII	CATG	4 cut(s)	43, 575, 882, 953
NlaIV	GGNNCC	4 cut(s)	255, 318, 476, 1056
NmuCI	GTSAC	2 cut(s)	28, 281
NsiI	ATGCAT	1 cut(s)	876
NspI	RCATGY	1 cut(s)	575
PaeR7I	CTCGAG	1 cut(s)	308
PauI	GCGCGC	1 cut(s)	34
PceI	AGGCCT	1 cut(s)	653
PciI	ACATGT	1 cut(s)	571
PcsI	WCGNNNNNNNCGW	1 cut(s)	99
PfeI	GAWTC	2 cut(s)	673, 702
Pfl23II	CGTACG	1 cut(s)	462
PflFI	GACNNNGTC	2 cut(s)	247, 886
PfoI	TCCNGGA	1 cut(s)	216
PkrI	GCNGC	5 cut(s)	61, 196, 210, 829, 894
PleI	GAGTC	1 cut(s)	395
PmaCI	CACGTG	1 cut(s)	281
PmlI	CACGTG	1 cut(s)	281
PpsI	GAGTC	1 cut(s)	395
Ppu21I	YACGTR	1 cut(s)	281
PscI	ACATGT	1 cut(s)	571
Psp124BI	GAGCTC	1 cut(s)	108
PspCI	CACGTG	1 cut(s)	281
PspLI	CGTACG	1 cut(s)	462
PspN4I	GGNNCC	4 cut(s)	255, 318, 476, 1056
PspXI	VCTCGAGB	1 cut(s)	308
PsuI	RGATCY	4 cut(s)	253, 316, 733, 1075
PsyI	GACNNNGTC	2 cut(s)	247, 886
PteI	GCGCGC	1 cut(s)	34
RsaI	GTAC	3 cut(s)	96, 464, 1056
RsaNI	GTAC	3 cut(s)	95, 463, 1055
SacI	GAGCTC	1 cut(s)	108
SaqAI	TTAA	2 cut(s)	495, 695
SatI	GCNGC	5 cut(s)	60, 195, 209, 828, 893
Sau3AI	GATC	6 cut(s)	253, 316, 558, 733, 739, 1075
SchI	GAGTC	1 cut(s)	396
ScrFI	CCNGG	3 cut(s)	190, 191, 218
SduI	GDGCHC	2 cut(s)	108, 162
SfaNI	GCATC	3 cut(s)	861, 883, 1026
Sfr274I	CTCGAG	1 cut(s)	308
SlaI	CTCGAG	1 cut(s)	308
SmaI	CCCGGG	1 cut(s)	191
SmlI	CTYRAG	3 cut(s)	308, 647, 694
SmoI	CTYRAG	3 cut(s)	308, 647, 694
Sse9I	AATT	5 cut(s)	581, 665, 752, 806, 1022
SseBI	AGGCCT	1 cut(s)	653
SsiI	CCGC	5 cut(s)	5, 25, 60, 169, 194
SspI	AATATT	1 cut(s)	902
SstI	GAGCTC	1 cut(s)	108
StuI	AGGCCT	1 cut(s)	653
StyD4I	CCNGG	3 cut(s)	188, 189, 216
StyI	CCWWGG	3 cut(s)	612, 866, 878
TaaI	ACNGT	2 cut(s)	457, 800
TaiI	ACGT	2 cut(s)	283, 468
TaqI	TCGA	2 cut(s)	309, 545
TasI	AATT	5 cut(s)	581, 665, 752, 806, 1022
TauI	GCSGC	2 cut(s)	62, 197
TfiI	GAWTC	2 cut(s)	673, 702
Tru1I	TTAA	2 cut(s)	495, 695
Tru9I	TTAA	2 cut(s)	495, 695
TscAI	CASTG	2 cut(s)	376, 1038
TseFI	GTSAC	2 cut(s)	28, 281
TseI	GCWGC	3 cut(s)	208, 827, 892
Tsp45I	GTSAC	2 cut(s)	28, 281
TspDTI	ATGAA	2 cut(s)	56, 567
TspMI	CCCGGG	1 cut(s)	189
TspRI	CASTG	2 cut(s)	376, 1038
Tth111I	GACNNNGTC	2 cut(s)	247, 886
Vha464I	CTTAAG	1 cut(s)	694
XapI	RAATTY	3 cut(s)	752, 806, 1022
XceI	RCATGY	1 cut(s)	575
XhoI	CTCGAG	1 cut(s)	308
XmaI	CCCGGG	1 cut(s)	189
XmiI	GTMKAC	1 cut(s)	66
Zsp2I	ATGCAT	1 cut(s)	876

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.